Protein Model on 8ji0_A_1 focusing on 214-th site
(TEMPLATE: 
8ji0
)Protein Model on 8ji0_A_1 focusing on 214-th site
(TEMPLATE: 8ji0
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| FOCUSED SITES | template(8ji0_A auth_asym_id:B) | ||||||
| SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
| 214 | T | 146 | 214 | T | S | e | 57.8 |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
| 1 | a | A(TMPS2_HUMAN) | A 1 (B) | polymer(polypeptide(L)) [341 aa] | Transmembrane protease serine 2 :TMPS2_HUMAN | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8ji0_A_1 identity=97.2% |
queryA 142:GEDENRCVRLYGPNFILQVYSSQRKSWHPVCQDDWNENYGRAACRDMGYKNNFYSSQGIVDDSGSTSFMKLNTSAGNVDIYKKLYHSDACSSKAVVSLRC: 241
:****************************************************************************************************:
8ji0_A_1 74:GEDENRCVRLYGPNFILQVYSSQRKSWHPVCQDDWNENYGRAACRDMGYKNNFYSSQGIVDDSGSTSFMKLNTSAGNVDIYKKLYHSDACSSKAVVSLRC: 173
SecStr : SSTT EEEETTTTEEEEEETTTTEEEE BSTT HHHHHHHHHHTTTTT EEEEEE S B STT S HHHH B S SS EEEEEES:
ExpBur :eeeeeeebebbbeebbbbbbbeeeeeebbbbeeebeeeebeebbebbbbeeebeeeeebeeeeeeebbbebeeeeeeeebbebbeeeeebeeebbbbbbb:
queryA 242:IACGVNLNSSRQSRIVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKT: 341
:******** **********************************************************************************:
8ji0_A_1 174:IACGVNLNXXXXXXXXXXESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKT: 273
SecStr :S S ---------- B TTSSTT EEEESSSSEEEE EEEETTEEEE HHHH TTS TTS EEEES BGGG TT SEEEEEEEE TT TTT:
ExpBur :bebbeeee----------eebeebbbbbbbbbbbeeebebbbbbbbbebbbbbbbbbeeeeeeeeebebbbeeeebeebeeeeeeebeebbebeebeeee:
queryA 342:KNNDIALMKLQKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDS: 441
:****************************************************************************************************:
8ji0_A_1 274:KNNDIALMKLQKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDS: 373
SecStr : S EEEEESS SSS B S SS EEEEES SSSS S SB EEEEEEEE HHHHTSTTTTTT TTEEEEE TTSS TT T:
ExpBur :bebbbbbbbbeeebeeeeebebbbbbbeebeeeeebebebbbbbbeeeeeeeeeebbbbebebeeeeebbeeeebeeebeebbbbbbeeebeebbbebbe:
queryA 442:GGPLVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRADG: 492
:***************************************************:
8ji0_A_1 374:GGPLVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRADG: 424
SecStr :T EEEEEETTEEEEEEEEEE SSSSS SS EEEEHHHHHHHHHHHHHHH :
ExpBur :bbbbbbeeeebbbbbbbbbeeebbeebeebbbbbbbeebbebbbeebeeee:
|
[assembly_id:1]
[help]