[pdbjlvh2]Protein Model on 7vpx_L

Protein Model on 7vpx_L_1 (TEMPLATE: 7vpx )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(DDX1_HUMAN)	L 1 (E)	polymer(polypeptide(L)) [455 aa]	Probable ATP-dependent RNA helicase DDX46 :DDX46_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7vpx_L_1 identity=32.7%

queryA         1:MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGS: 100
                :       *    *           ** **   ** *  * *    * ****** **  *          **     *   *                   :
7vpx_L_1     371:IKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLP----MFRHIMDQRSLEEGEGPI-------------------: 447
SecStr          : SSGGGSS  HHHHHHHHHHT SS  HHHHHHHHHHHTT  EEEE  TTS HHHHHHHH----HHHHHHHS     TT  S-------------------:    
ExpBur          :beeeeeeeeeeeeeeeeeeeeeeeeeeebbeebeeeeeebbbeeeeeeeeeeeeeeeee----eebeeeeeeeeeeebeee-------------------:    

queryA       101:AFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDK: 200
                :                                                                                                    :
7vpx_L_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       201:GHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE: 300
                :                                                                                      * * *  * **** :
7vpx_L_1     446:--------------------------------------------------------------------------------------PIAVIMTPTRELAL: 459
SecStr          :-------------------------------------------------------------------------------------- SEEEE SSHHHHH:    
ExpBur          :--------------------------------------------------------------------------------------eeeebbbeeeeebe:    

queryA       301:QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVS--TGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD: 397
                :*     * * *      **     **     *   *  *  * * ****  *      *   **  *   ******     *      *       *  *:
7vpx_L_1     460:QITKECKKFSKTLG---LRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI---VDNVRPD: 553
SecStr          :HHHHHHHHHTTTSS---       TTS HHHHHHHHHT  SEEEE HHHHHHHHHTTSS   SSSS SEEEEESHHHHTSSSSHHHHHHH---HHSS SS:    
ExpBur          :eeeeeeeeeeeeee---eeeeeeeeeeeeeebeeeeeeeeebbebbeeeeeebeeeeeebeeeeebeebeebebeeebebeebbeeeeee---eeeebee:    

queryA       398:GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA: 497
                :    *    ***        *   *   *  *   *   *   *   *         *       *                   *  *  *   * * *:
7vpx_L_1     554:---RQTVMFSATFPR-AMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQ-----------------ESGSVIIFVDKQEHA: 632
SecStr          :--- EEEEEES   H-HHHHHHTTTSSS EEE SS TT   SSEEEEEEE  SSHHHHHHHHHHHTSS----------------- SSSEEEE SSHHHH:    
ExpBur          :---bbeebbbeeeee-ebeeeebeebeeebeebeeebeeeeeebeeeeeeeeeeeeeeeeeeeeeebe-----------------eeeebebbeeeeeee:    

queryA       498:VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQ: 597
                :    *           *    *                         ***      *      ** *    *  * ***** *      * *   *    :
7vpx_L_1     633:DGLLKD--------LMRASYPC-----------------------MSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYE: 701
SecStr          :HHHHHH--------HHHTT  E-----------------------EEE SSS HHHHHHHHHHHHHTS SEEEE TTSSSS   SS  EEEE S  SSHH:    
ExpBur          :eeebee--------eeeeebee-----------------------beeeeeeeeeebeebeebeeeeebbbbeebeeeeeeeeeeebebbebeeeeeeee:    

queryA       598:NYVHRIGRVGRAERMGLAISLVATEKEK: 625
                : **** ** ***   * *          :
7vpx_L_1     702:DYVHRAGRTGRAGNKGYAYTFITEDQAR: 729
SecStr          :HHHHHHHTSS TT  EEEEEEE SS  S:    
ExpBur          :ebebbeebbeeeeeeebebebeeeeeee:

Protein Model on 7vpx_L_1 (TEMPLATE: 7vpx )

Input Residue Numbers for Focused Sites