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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | I 1 (D) | polymer(polypeptide(L)) [418 aa] | ATP-dependent RNA helicase has1 :HAS1_SCHPO | |
2 | b | ZA 1 (v) | polymer(polypeptide(L)) [161 aa] | Nucleolar protein 16 :NOP16_SCHPO | 283L(K) (identity: 0.0 %/39.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8esr_I_1 identity=39.5% |
queryA 13:IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQ: 112 :* * ** * ** *** * * *** ** ****** ** ** * * : 8esr_I_1 100:IQKAIKEMGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLIPTIEMLY-----------------------------------------------: 152 SecStr :HHHHHHHHT S HHHHTTSHHHHTT EEEE TTSSHHHHHHHHHHHHHH-----------------------------------------------: ExpBur :beebbeebeeeeeeebbeebbeebeeeebbbbbbebeebbebbbbbbbbeebe-----------------------------------------------: queryA 113:SREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDL: 212 : : 8esr_I_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 213:GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQT--KFLP-NAPKALIVEPSRELAEQTLNNIKQF: 309 : ** * * * * **** * * : 8esr_I_1 153:--------------------------------------------------------------------ALKFKPRNGTGVIIISPTRELALQIFGVAKEL: 184 SecStr :--------------------------------------------------------------------HHT GGG EEEE SSHHHHHHHHHHHHHH: ExpBur :--------------------------------------------------------------------eeebeeeebbbbbbbbbbbbbbebbebbbebb: Contact : b b queryA 310:KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA: 408 : ** *** * * ** * **** ** * * * ** **** * * * * * : 8esr_I_1 185:LKYHHQT---FGIVIGGANRRAEADKLVKGVNLLVATPGRLLDHLQNTKGFVFRNLRSLVIDEADRILEIGFEDEMRQIMKILP---SENRQTLLFSATQ: 278 SecStr :TSS ---EEEE TTS HHHHHHHHHT SEEEE HHHHHHHHHH SS TT EEEES HHHHHHHT HHHHHHHHHHS --- TT EEEEE SS : ExpBur :beebebe---ebbbbeeeeeeebbeebeebbbbbbbbbebbbebbeebeebeeeebebbbbbbbbbbbeeeebeebeebbeebe---eeebbbbbbbeee: queryA 409:TLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ: 508 :* * * * : 8esr_I_1 279:TTKVEDLARISLK---------------------------------------------------------------------------------------: 291 SecStr : HHHHHHHHHHS ---------------------------------------------------------------------------------------: ExpBur :eeebeebbeebbe---------------------------------------------------------------------------------------: queryA 509:AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC----------------------------------------------------------------: 544 : : 8esr_I_1 292:------------------------------------PGPLYVNVDXXXXXXXXXXXEQGYVVVDSDKRFLLLFSFLKRNLKKKVIVFMSSCASVKYMAEL: 355 SecStr :------------------------------------SS EEEE ----------- EEEE STTHHHHHHHHHHHTTTSEEEEEES HHHHHHHHHH: ExpBur :------------------------------------eeeeebebe-----------ebbbbebebeebbbbbbbbbeebeeebbbbbbbbbebbebbbeb: Contact : b queryA 545:-----------LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG: 604 : *** * * * * ** ***** ** * ** * ** *: 8esr_I_1 356:LNYIDLPVLD-LHGKQKQQRRTNTFFEFCNAEKGILLCTNVAARGLDIPAVDWIVQYDPPDDPRDYIHRVG: 425 SecStr :HHHTT EE-S TTS HHHHHHHHHHHHH SSEEEEEEHHHHTTS SEEEE S S HHHHHHH : ExpBur :beebebebeb-bbbeeebeebeebbeebeeeeebbbbbbbbbbbeeeeeebebebbbbbbbbbebbeeeee: |