Protein Model on 2hyi_I_1_J_1
(TEMPLATE: 
2hyi
)Protein Model on 2hyi_I_1_J_1
(TEMPLATE: 2hyi
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(DDX1_HUMAN) | I 1 (I) | polymer(polypeptide(L)) [392 aa] | Probable ATP-dependent RNA helicase DDX48 :DDX48_HUMAN | |
| 2 | b | J 1 (J) | polymer(polypeptide(L)) [51 aa] | Protein CASC3 :CASC3_HUMAN | 333L(I) 334S(R) 337E(D) 338N(Y) 357G(R) 359L 360N(R) 361L(T) 362S(R) 381S(K) 384I 385N(Y) 388H(Y) 389N(R) 390Q(Y) 391I(L) 392P 393Q(P) 421K 422I(F) 514R(N) 515T 518D(K) 521N(W) 591T(D) 593P 594D(N) 595E(N) 596K(R) 623K(D) 626V(I) 629H(D) (identity: 18.8 %/34.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:2hyi_I_1 identity=34.4% |
queryA 3:AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF: 102
: * ** * ** * * * ** * *** *** * * :
2hyi_I_1 39:TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ----------------------------------------: 98
SecStr :SGGGS HHHHHHHHHHT S TTHHHHHHHHHTT EEEE TTSSHHHHHHHHHHH----------------------------------------:
ExpBur :ebeebebeeebbebbeeeeeeebbebbbebbebbeeeebbbbbbebbbebebbbbbbbbb----------------------------------------:
queryA 103:AIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH: 202
: :
2hyi_I_1 -1:----------------------------------------------------------------------------------------------------: -1
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
queryA 203:VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP---------KALIVE: 293
: *** :
2hyi_I_1 99:-------------------------------------------------------------------------------------CLDIQVRETQALILA: 113
SecStr :-------------------------------------------------------------------------------------T TTS S EEEE :
ExpBur :-------------------------------------------------------------------------------------ebebeeeebbbbbbb:
Contact : bb
queryA 294:PSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ: 393
:* **** * * *** * * * ***** * * ******* * * * * :
2hyi_I_1 114:PTRELAVQIQKGLLALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPP: 210
SecStr :SSHHHHHHHHHHHHHHTTTTT--- EEEE TTS HHHHHHHHHH SEEEE HHHHHHHHHTTSS TT EEEEETHHHHTSTTTHHHHHHHHTTS T:
ExpBur :bbebbbebbbebbeebbeebe---bebbbbbbeeeeeebeeebeebbbbbbbbbebbebbbeeebbebebbebbbbbbbbebbeeebeeebeebeeebee:
Contact : bb bb b bbbb b bb bbbbbb
queryA 394:VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK: 493
: * ** **** * * * * * * ** * * * :
2hyi_I_1 211:AT------QVVLISATL-PHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--------ER------------------------EEWK--FDTLC: 269
SecStr :T ------EEEEEES - HHHHHTGGGT SS EEE GGG S TTEEEEEEEE--------SS------------------------THHH--HHHHH:
ExpBur :eb------bbbbbbbbb-beebbebbeebbeebbebbbeeeebbeeebebbbeeb--------ee------------------------beeb--beebb:
Contact : bb
queryA 494:GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP: 593
: * * ** *** ** * * * *** ** * * * ** *** *** * * ** **:
2hyi_I_1 270:DLYDTLTIT-----QAVIFCNTKRKVDWLTEKM---------REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLP: 355
SecStr :HHHHHHTTS----- EEEE S HHHHHHHHHHH---------HHTT EEE TTS HHHHHHHHHHHHHTSS EEEE GGGTSS TT EEEESS :
ExpBur :ebbebbbeb-----bbbbbbeeeebbeebbeeb---------eeeeeebbbbbeebebeebeebbeebeeeebebbbbbebbbbbbebeebbbbbbbbbb:
Contact : bb b b b b
queryA 594:DEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE: 645
: * ***** ** * * ** * * * *:
2hyi_I_1 356:NNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI-----EQYYSTQIDE: 402
SecStr :SSHHHHHHHHTTSSGGG EEEEEEEETTHHHHHHHH-----HHHTT EEE:
ExpBur :eeebbbbbbbbbbbbeeeebbbbbbbeeeeeeebeeb-----beebebebee:
Contact :bbb b b b
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[assembly_id:2]
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