[pdbjlvh2]Protein Model on 3jcr_F

Protein Model on 3jcr_F_1 (TEMPLATE: 3jcr )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(DDX1_HUMAN)	F 1 (F)	polymer(polypeptide(L)) [435 aa]	hPrp28 :DDX23_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3jcr_F_1 identity=31.4%

queryA         1:MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGS: 100
                :          * *           ** **   **  *   *    ******** ** **                                         :
3jcr_F_1     390:IRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLL---------------------------------------: 450
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       101:AFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDK: 200
                :                                                                                                    :
3jcr_F_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       201:GHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA--------------: 286
                :                                                                                                    :
3jcr_F_1     451:--------------------------------------------------------------------------------------VWITTLPKIDRIEE: 464
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       287:----PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD: 382
                :    * * *  * **** *       * *       *    ***    **   *  *  **  ***** *      * **     ******     *   :
3jcr_F_1     465:SDQGPYAIILAPTRELAQQIEEETIKFGKPLG---IRTVAVIGGISREDQGFRLRMGXEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEP: 561
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       383:FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDV--KKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN: 480
                :         *                 *  *     *     *   *          *  *               ***  *  *   *           :
3jcr_F_1     562:DVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTAT---------MPPAV---------------ERLARSYLRRPAVVYIGXXXXXXE: 637
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       481:SPEMWSEAIKILKGEYAVRAIKEHKMDQA-IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI: 579
                :  *                ** *   *   ***   *  ** *       *              *        *   *   * *    *  ***    *:
3jcr_F_1     638:RVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMG---------YNACTLXXXXXXXXREFALSNLKAGAKDILVATDVXXXXI: 728
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       580:DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV: 630
                :**  *  * *         * ***** ***   * **     *   * *  :
3jcr_F_1     729:DIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYEL: 779
SecStr          :---------------------------------------------------:    
ExpBur          :---------------------------------------------------:

Protein Model on 3jcr_F_1 (TEMPLATE: 3jcr )

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