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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(DDX1_HUMAN) | E 1 (A) | polymer(polypeptide(L)) [420 aa] | ATP-dependent RNA helicase vasa :VASA_DROME |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2db3_E_1 identity=33.8% |
queryA 287:PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR: 386 :* ** * **** * * * * ** * * * * ***** * * ** ****** * * * *: 2db3_E_1 130:PQVVIVSPTRELAIQIFN---EARKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSEDMRR: 226 SecStr : SEEEE SSHHHHHHHHH---HHHHHTTTSS EE TTS HHHHHHHHTT SEEEE HHHHHHHHHTTS TT EEEEETHHHHTSTTTHHHHHH: ExpBur :bbbbbbbbbebbbbbbbe---bbbbbbbeeebebbbbbbebebebbeebbeebbbbbbbbbebbbebbeeeebbbebbbbbbbbbbbebbbeeeeeebee: queryA 387:MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWS: 486 : * *** * * ** * *: 2db3_E_1 227:IMTHVTMRPEH----QTLMFSATFPE-EIQRMAGEFLKNYVFVAIGIVGGACSDVKQTIYEVNKYAKR-------------------------------S: 290 SecStr :HHH TTS SS ----EEEEEES H-HHHHHHHTT SS EEEEESSTT TTEEEEEEE GGGHH-------------------------------H: ExpBur :bbeeebbeeee----bbbbbbbbbee-ebbeebeebbeeebbbbbeeebebbebbebebeebeeeebe-------------------------------e: queryA 487:EAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY: 586 : * ** * * * ** * * * **** * * * ** * ** * ** ** ** : 2db3_E_1 291:KLIEILS----------EQADGTIVFVETKRGADFLASFLSEK---------EFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSVASRGLDIKNIKH: 371 SecStr :HHHHHHH----------H TTEEEE SSHHHHHHHHHHHHHT---------T EEEESTTS HHHHHHHHHHHHTSS SEEEE GGGTSS TT E: ExpBur :ebbebbe----------eebebbbbbbeeeeebeebbeebeee---------ebebbbbbeeeebeebbebbebbeeeebebbbbbebbbbbbebeebeb: queryA 587:VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK: 625 :*** * ******* ** * * * ** : 2db3_E_1 372:VINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDR: 410 SecStr :EEESS SSHHHHHHHHTTSS TT EEEEEEE TTT G: ExpBur :bbbbbbbeebbbbbbbbbbbbbbbeebebbbbbbeeebe: |