[pdbjlvh2]Protein Model on 5gvs_D

Protein Model on 5gvs_D_1 (TEMPLATE: 5gvs )

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[sequence-replaced 3D model] [for PyMOL]

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:4]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(DDX1_HUMAN)	D 1 (D)	polymer(polypeptide(L)) [197 aa]	Probable ATP-dependent RNA helicase DDX41 :DDX41_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5gvs_D_1 identity=38.9%

queryA       279:QTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKYI---DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDE: 371
                :* * **      *  **  ****** **                * **  * ***     *      **   * ***** **       *   * * ***:
5gvs_D_1      78:QEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDE: 177
SecStr          :HHHHS   TT   SEEEE S HHHHHHHHHHHHHHHHHHHTTTS    EEEE TT  HHHHHTTTTS  SEEEE HHHHHHHHHTTS   TT  EEEETT:    
ExpBur          :ebeeeebeeeebbbbbbbbbeeebbeebbeebeeebeeeeeeeeeebebbbbbbebeeeeeeebeeebbbbbbbbbeebbebbeeeebebeebebbbbbb:    

queryA       372:ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATL: 410
                :**     *    *             * * *    *** :
5gvs_D_1     178:ADRMIDMGFEGDIRTIFSYF-----KGQR-QTLLFSATM: 210
SecStr          :HHHHHHTT HHHHHHHHHT ----- S  -EEEEEES  :    
ExpBur          :bbebbeeeeeeebeebbeeb-----eeee-bbbbbbeee:

Protein Model on 5gvs_D_1 (TEMPLATE: 5gvs )

Input Residue Numbers for Focused Sites