[pdbjlvh2]Protein Model on 2hxy_D

Protein Model on 2hxy_D_1 (TEMPLATE: 2hxy )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:4]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(DDX1_HUMAN)	D 1 (D)	polymer(polypeptide(L)) [376 aa]	Probable ATP-dependent RNA helicase DDX48 :DDX48_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2hxy_D_1 identity=33.7%

queryA         3:AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF: 102
                : *  **                *  **   *  *  * **      * ***  *** * *         *                              :
2hxy_D_1      17:TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQ------------------------------:  86
SecStr          : SGGGT  HHHHHHHHHHT  S  HHHHHHHHHHHHT  EEEE  SSS TTHHHHHHHHHS  TTS S  ------------------------------:    
ExpBur          :ebeebebeeebbebbeeeebeebeeebeebbebbeeebbbbbbeeeeeebebbbbbbbbbbbebeeebbb------------------------------:    

queryA       103:AIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH: 202
                :                                                                                                    :
2hxy_D_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       203:VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQT: 302
                :                                                                                      ***  * **** * :
2hxy_D_1      86:-------------------------------------------------------------------------------------QALILAPTRELAVQI: 100
SecStr          :------------------------------------------------------------------------------------- EEEE S HHHHHHH:    
ExpBur          :-------------------------------------------------------------------------------------bbbbbbbeeebbeeb:    

queryA       303:LNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ: 402
                :         *           ***         *  *   * *****  *      *       *******  *  *    *       *  *      *:
2hxy_D_1     101:QKGLLALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT------Q: 191
SecStr          :HHHHHHHSGGGT---  EEEE  SSSHHHHHHHHHHH SEEEE HHHHHHHHHTT S  TT  EEEETTHHHHHHTT HHHHHHHHHHS TT ------E:    
ExpBur          :bebbeebbeebe---bbbbbbbeeeeeeebeeebeebbbbbbbbbebbbbbbeeebbebeebebbbbbebbebbeeebeeebbbbeeebeeeb------b:    

queryA       403:VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK: 502
                :*   ****          * *  *     *             * *        **                        * *      *   *    * :
2hxy_D_1     192:VVLISATL-PHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--------ER------------------------EEWK--FDTLCDLYDTLTIT: 256
SecStr          :EEEEES  - TTHHHHHTTS SS EEE SS    B TT EEEEE  -------- S------------------------THHH--HHHHHHHHTTTTTS:    
ExpBur          :bbbbbeeb-eeebbebbeebbebbbbbeeeebebebeebebbbeeb--------ee------------------------eeeb--beebbebbeebeeb:    

queryA       503:EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR: 602
                :     ** *** **   * *                 *     ***    **      *  *  * ** *** *** *   *   **  **     * **:
2hxy_D_1     257:-----QAVIFCNTKRKVDWLTEKM---------REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHR: 342
SecStr          :-----  EEEES HHHHHHHHHHH---------HTT   EEEE TTS HHHHHHHHHHHHHTS SEEEEES  SSSS S   SEEEESS  SSTHHHHHH:    
ExpBur          :-----bbbbbbeeeebbeebbeeb---------eeeeeebbbbbeebeeeebeebbeebbeeebebbbbbebbeebeebbeebbbbbbbbbeeeeebbeb:    

queryA       603:IGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE: 645
                :*** **  * * **  *                   * *   *:
2hxy_D_1     343:IGRSGRYGRKGVAINFVKNDDIRILRDI-----EQYYSTQIDE: 380
SecStr          :H B SSSS   EEEEE  GGGTTHHHHH-----HHHHT   EE:    
ExpBur          :bbbbeebbeebbbbbbbbeebeebbeeb-----beeeeeebee:

Protein Model on 2hxy_D_1 (TEMPLATE: 2hxy )

Input Residue Numbers for Focused Sites