Protein Model on 3ex7_C_1_D_1
(TEMPLATE: 
3ex7
)Protein Model on 3ex7_C_1_D_1
(TEMPLATE: 3ex7
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(DDX1_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [392 aa] | Eukaryotic initiation factor 4A-III :IF4A3_HUMAN | |
| 2 | b | D 1 (D) | polymer(polypeptide(L)) [57 aa] | Protein CASC3 :CASC3_HUMAN | 319R(Q) 333L(I) 334S(R) 337E(D) 338N(Y) 357G(R) 359L 360N(R) 361L(T) 362S(R) 384I 385N(Y) 388H(Y) 389N(R) 390Q(Y) 391I(L) 392P 393Q(P) 420E(N) 421K 422I(F) 423M 424H(T) 483E 484M(E) 514R(N) 515T 517I(R) 518D(K) 521N(W) 591T(D) 593P 594D(N) 595E(N) 596K(R) 620A(K) 622E(D) 623K(D) 625K(R) 626V(I) 629H(D) (identity: 19.5 %/34.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3ex7_C_1 identity=34.4% |
queryA 3:AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF: 102
: * ** * ** * * * ** * *** *** * * :
3ex7_C_1 39:TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ----------------------------------------: 98
SecStr : GGGS HHHHHHHHHHT S TTHHHHHHHHHTT EEEE TTSSHHHHHHHHHHH----------------------------------------:
ExpBur :ebeebebeeebbebbeeeeeeebbebbbebbebbeeeebbbbbbebbbebbbbbbbbbbb----------------------------------------:
queryA 103:AIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH: 202
: :
3ex7_C_1 -1:----------------------------------------------------------------------------------------------------: -1
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
queryA 203:VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP---------KALIVE: 293
: *** :
3ex7_C_1 99:-------------------------------------------------------------------------------------CLDIQVRETQALILA: 113
SecStr :-------------------------------------------------------------------------------------T TTS S EEEE :
ExpBur :-------------------------------------------------------------------------------------ebebeeeebbbbbbb:
Contact : bb
queryA 294:PSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ: 393
:* **** * * *** * * * ***** * * ******* * * * * :
3ex7_C_1 114:PTRELAVQIQKGLLALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPP: 210
SecStr :SSHHHHHHHHHHHHHHTTTTT--- EEEE TTS HHHHHHHHHH SEEEE HHHHHHHHHTTSS TT EEEEETHHHHTSTTTHHHHHHHHTTS T:
ExpBur :bbebbbebbbebbeebbeebe---bebbbbbbeeeeeebeeebeebbbbbbbbbebbbbbbeeebbebebbebbbbbbbbebbeeebeeebeebeeebee:
Contact : b bb bb b bbbb bb bbbbbb
queryA 394:VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK: 493
: * ** **** * * * * * * ** * * * :
3ex7_C_1 211:AT------QVVLISATL-PHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--------ER------------------------EEWK--FDTLC: 269
SecStr :T ------EEEEEES - HHHHTGGGGT SS EEE GGG S TTEEEEEEE --------SS------------------------TTHH--HHHHH:
ExpBur :eb------bbbbbbbbb-beebbebbeebbeebbebbbeeeebbbebbebbbeeb--------ee------------------------eeeb--beebb:
Contact : bbbbb bb
queryA 494:GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP: 593
: * * ** *** ** * * * *** ** * * * ** *** *** * * ** **:
3ex7_C_1 270:DLYDTLTIT-----QAVIFCNTKRKVDWLTEKM---------REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLP: 355
SecStr :HHHHHHTTS-----EEEEE SSHHHHHHHHHHH---------HHTT EEE TTS HHHHHHHHHHHHHTS EEEE GGGSSS TTEEEEEESS :
ExpBur :ebbebbeeb-----bbbbbbeeeebbeebbeeb---------eeeeeebbbbbeebebeebeebbeebeeeebebbbbbebbbbbbebeebbbbbbbbbb:
Contact : bb bb b b b
queryA 594:DEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE: 645
: * ***** ** * * ** * * * *:
3ex7_C_1 356:NNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI-----EQYYSTQIDE: 402
SecStr :SSHHHHHHHHTTSSGGG EEEEEEE TTTHHHHHHH-----HHHHT EEE:
ExpBur :eeebbbbbbbbbbbbeeeebbbbbbbeeebeeebeeb-----beebebebee:
Contact :bbb b bb bb b
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[assembly_id:1]
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