[pdbjlvh2]Protein Model on 4ct5_B

Protein Model on 4ct5_B_1 (TEMPLATE: 4ct5 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(DDX1_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [375 aa]	DDX6 :DDX6_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4ct5_B_1 identity=36.0%

queryA         4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103
                :*       *      ** *  *  ** ****  * * * *  *  * ** **  **                                            :
4ct5_B_1       7:FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLE-----------------------------------------:  65
SecStr          :GGGG   HHHHHHHHHHT  S  HHHHHHHHHHTTT  EEEE  SSS THHHHHHHHHH-----------------------------------------:    
ExpBur          :beebebeeebbbbbeeeeeeebeeebeebbeebeeeebbbbebeeeeebbbbbbbbbbb-----------------------------------------:    

queryA       104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203
                :                                                                                                    :
4ct5_B_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP---------KALIVEP: 294
                :                                                                                              *    *:
4ct5_B_1      66:------------------------------------------------------------------------------------RLDLKKDNIQAMVIVP:  81
SecStr          :------------------------------------------------------------------------------------H  TT  S  EEEE S:    
ExpBur          :------------------------------------------------------------------------------------ebeeeeeebbbbbbbb:    

queryA       295:SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV: 394
                : **** *      *  *     *       **   **    *   *  *  ****  **   *      *   ****** ****   **   *   *   :
4ct5_B_1      82:TRELALQVSQICIQVSKHMGGAKV--MATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQ---DFVQIMEDIILTL: 176
SecStr          : HHHHHHHHHHHHHHSTTSTT  E--EEE SSS HHHHHHHTTS   EEEE HHHHHHHHHHT S  TT  EEEEESHHHHTST---TTHHHHHHHHHTS:    
ExpBur          :eeebbeebbeebeebbeebeebeb--bbbbeeeeebebeeebeeebbbbbbbbebbeebbeeeebebeebebbbbbbbbebbee---eeeeebeebbeeb:    

queryA       395:TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG: 494
                :    *  *    ***     * *        *    *  *                 * *              **               *        :
4ct5_B_1     177:P---KNRQILLYSATF-PLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYV----TER------------QKVHCLNT---------LFSRL------: 241
SecStr          : ---TT EEEEEESS - HHHHHHHHHH  S EEES TT  B TT EEEEEE ---- HH------------HHHHHHHH---------HHHHS------:    
ExpBur          :b---eebbbbbbbbeb-eebbbebbeebbeebebbebeeebbbeebebbbbeb----eee------------ebbebbee---------bbeeb------:    

queryA       495:EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD: 594
                :             * ****        *     * *          **   *       *      *  *  * * ***   *****  *  ***   * :
4ct5_B_1     242:----------QINQSIIFCNSSQRVELLAKKISQLG---------YSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPK: 322
SecStr          :----------  SEEEEE S HHHHHHHHHHHTTTT---------  EEE  TTS HHHHHHHHHHHHTTS SEEEE S  SS    TTEEEEEESS  S:    
ExpBur          :----------ebebbbbbbeebeebeebbeebeeee---------eebeebbeebeeeebeebbebbeeeebebbbbbeebeebbebebbbbbbbbbbbe:    

queryA       595:EKQNYVHRIGRVGRAERMGLAISLVA: 620
                :    * ***** **    **** *  :
4ct5_B_1     323:LAETYLHRIGRSGRFGHLGLAINLIT: 348
SecStr          :SHHHHHHHH B SS     EEEEEE :    
ExpBur          :ebbbbbebbbbbeeeeeebbbbbbbb:

Protein Model on 4ct5_B_1 (TEMPLATE: 4ct5 )

Input Residue Numbers for Focused Sites