[pdbjlvh2]Protein Model on 2oxc_B_1_D

Protein Model on 2oxc_B_1_D_1 (TEMPLATE: 2oxc )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(DDX1_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [205 aa]	Probable ATP-dependent RNA helicase DDX20 :DDX20_HUMAN
2	b		D 1 (B)	non-polymer(ADP)	ADENOSINE-5'-DIPHOSPHATE	29Q 47E(K) 48T(S) 49G 50S(T) 51G 52K 53T 54G(C) (identity: 55.6 %/35.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2oxc_B_1 identity=35.9%

queryA        25:PTDIQAESIPLILGGGDVLMAAETGSGKTGAFS-IPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR: 123
                :*   *   ***   * *    *  * ***  ** *     * * *  *                                                    :
2oxc_B_1      47:PSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLENLSTQ----------------------------------------------------:  94
SecStr          :  HHHHHHHHHHHTT  EEEE  TTSSHHHHHHHHHHHH  TT  S  ----------------------------------------------------:    
ExpBur          :beebbeebbeebeeeeebbbebeeebebebbbbbbbbbebeeeeeebb----------------------------------------------------:    
Contact         :    b                 bbbbbbbb                                                                      

queryA       124:ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMK: 223
                :                                                                                                    :
2oxc_B_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       224:NQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI: 323
                :                                                                  **  * ** * *    *           *     :
2oxc_B_1      94:----------------------------------------------------------------QILILAPTREIAVQIHSVITAIGIKMEG--LECHVF: 127
SecStr          :---------------------------------------------------------------- EEEE SSHHHHHHHHHHHHHHTTTSTT--  EEEE:    
ExpBur          :----------------------------------------------------------------bbbbbbbeeebbeebeeebeebbeebee--bebebb:    

queryA       324:IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQG-YSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKI: 422
                :***         *     * ** ***   *     **    *   ***** **  *     **      *         *    ***   *    *  * :
2oxc_B_1     128:IGGTPLSQDKTRLKK-CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASK------QMLAVSATYPEFLANALT-KY: 219
SecStr          : TTS HHHHHHHTTS- SEEEE HHHHHHHHHTTSS GGG  EEEEESHHHHHSTTSSHHHHHHHHHHS SS ------EEEEEES   HHHHHHHT-TT:    
ExpBur          :beeeeeeebeeebee-bbbbbbbbebbeebbeeeebebeebebbbbbebbebbeeeeeeeebbebeeebeeeb------bbbbbbeeeeeebbebbe-eb:    

queryA       423:MHFPTWVDL: 431
                :*  ** * *:
2oxc_B_1     220:MRDPTFVRL: 228
SecStr          : SS EEE  :    
ExpBur          :beeeeebee:

Protein Model on 2oxc_B_1_D_1 (TEMPLATE: 2oxc )

Input Residue Numbers for Focused Sites