Protein Model on 8kca_A_1 (TEMPLATE: 8kca )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description
1 a A(DDX1_HUMAN) A 1 (A) polymer(polypeptide(L)) [173 aa] Probable ATP-dependent RNA helicase DDX53 :DDX53_HUMAN
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8kca_A_1 identity=34.2%
queryA       507:DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV: 606
                :*  * *   *   * *   *  **          *   ***           * ** *    ** **   ** *   *  * *   *     **** *  :
8kca_A_1      29:DKVIMFVSQKHIADDLSSDFNIQG---------ISAESLHGNSEQSDQERAVEDFKSGNIKILITTDIVSRGLDLNDVTHVYNYDFPRNIDVYVHRVGYI: 119
SecStr          :  EEEE S HHHHHHHHHHHHHHT---------  EEEE TT  HHHHHHHHHHHHHTS SEEEESS   TT  GGG  EEEESS  SSHHHHHHHHHHH:    
ExpBur          :bbbbbbbeeeeebeebbeebeeee---------bebebbeeebeeeebeebbeebeeeebebbbbbeeebeebebebbebbbbbbbbeebeebeebbebb:    

queryA       607:GRAERMGLAISLVATEKEKV: 626
                :**    *    *      * :
8kca_A_1     120:GRTGKTGTSVTLITQRDSKM: 139
SecStr          :HTTT  EEEEEEE GGGGGG:    
ExpBur          :eeeeeebbbbbbbbeebbeb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123