[pdbjlvh2]Protein Model on 3eiq_A

Protein Model on 3eiq_A_1 (TEMPLATE: 3eiq )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(DDX1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [364 aa]	Eukaryotic initiation factor 4A-I :IF4A1_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3eiq_A_1 identity=31.2%

queryA       249:FPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP: 347
                : *   *      *  *   *          *      *  **   * **** *          *           ***   *     *      * ****:
3eiq_A_1      72:LPCIKGYDVIAQAQSG-TGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHA---CIGGTNVRAEVQKLQMEAPHIIVGTP: 167
SecStr          :HHHHTT  EEE   S -SSSHHHHHHHHHHH  TTS S  EEEE SSHHHHHHHHHHHHHHGGGS   EEE---    TTHHHHHHHHTTT  SEEEE H:    
ExpBur          :ebbbeeebbbbbbeee-ebbbbbbbbbbbeebeeeeebbbbbbbbbeeeebeebbebbebbbeebebebbb---bbeeeeeeebbeebeeebbbbbbbbb:    

queryA       348:GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP: 447
                :**  *      *        ******  ** *  * *          *      **   ***  * **     * *  *     * *             :
3eiq_A_1     168:GRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNT------QVVLLSATMPS-DVLEVTKKFMRDPIRILVKKEELTLEGIRQFYIN: 260
SecStr          :HHHHHHHHHTSS STT  EEEE SHHHHHHTTTHHHHHHHHTTS TT ------EEEEE S   H-HHHHHHTTT SS EEE        TTS  EEEEE:    
ExpBur          :eebbebbeeeebeeeebebbbbbbbbebbeeebeeebeebbeebeeeb------bbbbbbeebee-ebeebbeeebeebbebebeeeeeebeebebbbee:    

queryA       448:VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG: 547
                :*        **                        * *      *   *    *      ** **  *    * *                 *       :
3eiq_A_1     261:V--------ER------------------------EEWK--LDTLCDLYETLTIT-----QAVIFINTRRKVDWLTEKM---------HARDFTVSAMXX: 312
SecStr          : --------SS------------------------STTH--HHHHHHHHHSS  S-----S EEE S HHHHHHHHHHH---------HTTT   EE --:    
ExpBur          :b--------ee------------------------eeeb--beebbebeeeeeee-----ebbbbbeeeeebeebbeeb---------eeeebebeeb--:    

queryA       548:DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE: 645
                :     **      *  *    ** **  *  **   *  ***  **    ** *****       * **  *  *                ***   *:
3eiq_A_1     313:XMDQKERDVIMREFRSGXXXVLITTDLLAXXIDVQQVSLVINYDLPTNRENYIHRIGRXXXXXXXGVAINMVTEEDKRTLRDI-----ETFYNTSIEE: 405
SecStr          :- HHHHHHHHHHHHS  --- EEE SS  --  GGG S EEESS  SSTHHHHHHS  -------  EEEEE STHHHHHHHH-----HHHTT   EE:    
ExpBur          :-eeeeebebeeebeeee---bbbbbeeee--eebeebebbbbbbbbeeeeebbebbbb-------eebbbbbbeeeeeebeeb-----eeebebebee:

Protein Model on 3eiq_A_1 (TEMPLATE: 3eiq )

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