[pdbjlvh2]Protein Model on 3bor_A

Protein Model on 3bor_A_1 (TEMPLATE: 3bor )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(DDX1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [194 aa]	Human initiation factor 4A-II :IF4A2_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3bor_A_1 identity=30.2%

queryA         4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103
                :*  *                 *  **   *     * **   *  * ***  * *   *      *  *                               :
3bor_A_1      32:FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQ-------------------------------: 100
SecStr          :GGGS   HHHHHHHHHHT  S  HHHHHHHHHHHTT  EEE   SSHHHHHHHHHHHHHH  TTS S  -------------------------------:    
ExpBur          :beebebeeebbebbeeeebeebeebbeebbbbbbeeebbbbebeeeeebbbbbbbbbbbebebeeeebb-------------------------------:    

queryA       104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203
                :                                                                                                    :
3bor_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTL: 303
                :                                                                                     **   * **** *  :
3bor_A_1     100:------------------------------------------------------------------------------------QALVLAPTRELAQQIQ: 115
SecStr          :------------------------------------------------------------------------------------ EEEE SSHHHHHHHH:    
ExpBur          :------------------------------------------------------------------------------------bbbbbbbbbebbeebe:    

queryA       304:NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV: 403
                :  *     *          *                  ********  *      *        ******  ** *  * *                 **:
3bor_A_1     116:KVILALGDYMGATC--HACIGXXXXXXXXXXXXXEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKL------NTSIQV: 207
SecStr          :HHHHHHTTTTT  E--EEE  -------------   SEEEE HHHHHHHHHTTSS STT  EEEEESHHHHHHTT HHHHHHHHHHS------ TT EE:    
ExpBur          :ebbeebbeebebeb--eebee-------------eebbbbbbbbeebbebbeeeebeeeebebbbbbbbbebbeeebeeebbebeeeb------eeebbb:    

queryA       404:IVCSATLHSFDVKKLSEKIMHFPTWV: 429
                :   ***    **     * *  *   :
3bor_A_1     208:VLLSATMPT-DVLEVTKKFMRDPIRI: 232
SecStr          :EEE SS  H-HHHHHHHHH SS EEE:    
ExpBur          :bbbbeebee-ebeebbeebbeebeeb:

Protein Model on 3bor_A_1 (TEMPLATE: 3bor )

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