[pdbjlvh2]Protein Model on 1qva_A

Protein Model on 1qva_A_1 (TEMPLATE: 1qva )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(DDX1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [213 aa]	INITIATION FACTOR 4A :IF4A_YEAST

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1qva_A_1 identity=36.3%

queryA        25:PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRA: 124
                :*  **   *  *  * ***  *  * **** ***   *      *  *                                                    :
1qva_A_1      44:PSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQ----------------------------------------------------:  91
SecStr          :  TTHHHHHHHHHTT  EEEE  SSHHHHHHHHHHHHHH  TT  S  ----------------------------------------------------:    
ExpBur          :beebbbebbbbbbeeebbbbebeeeeebbbbbbbbbbeebeeeeebbb----------------------------------------------------:    

queryA       125:TKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKN: 224
                :                                                                                                    :
1qva_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       225:QALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII: 324
                :                                                             ** **   * **** *            *         *:
1qva_A_1      88:------------------------------------------------------------KAPQALMLAPTRELALQIQKVVMALAFHMD---IKVHACI: 124
SecStr          :------------------------------------------------------------ S  EEEE SSHHHHHHHHHHHHHHTTTS ---  EEEE :    
ExpBur          :------------------------------------------------------------ebbbbbbbbbeeeebeebbebbeebbeebe---bebbbbb:    

queryA       325:GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH: 424
                :**         *     ********  *                *****  ** *    *       *  *      **   ***    **     * * :
1qva_A_1     125:GGTSFVEDAEGLRDA-QIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTT------QVVLLSATMPN-DVLEVTTKFMR: 216
SecStr          :TT  HHHHHHHHHH -SEEEE HHHHHHHHTTT    TT  EEEETTHHHHHTTT HHHHHHHHHTS TT ------EEEEEESS  H-HHHHHHHHH S:    
ExpBur          :eebeeeebeebbeeb-bbbbbbbbebeebbeeebbbbeebebbbbbbbbebbeeeeeeebbebbeebbeeb------bbbbbbeeeee-ebeebbeeebe:    

queryA       425:FPTWV: 429
                : *   :
1qva_A_1     217:NPVRI: 221
SecStr          :S EEE:    
ExpBur          :ebbeb:

Protein Model on 1qva_A_1 (TEMPLATE: 1qva )

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