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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [374 aa] | Probable ATP-dependent RNA helicase p47 :UAP56_HUMAN | |
2 | b | B 1 (A) | non-polymer(MG) | MAGNESIUM ION | 52K 53T 370D 371E (identity: 100.0 %/33.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1xtj_A_1 identity=33.0% |
queryA 2:AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSA: 101 : * ** * * * * ** * *** * * *** * * : 1xtj_A_1 8:SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQ---------------------------------------: 68 SecStr : TTGGG HHHHHHHHHTT S HHHHHHHHHHHTT EEEEE TTSSHHHHHHHHHHH---------------------------------------: ExpBur :ebbeebebeeebeebbeebeeeebeebbeebbeebeeeebbbbbbeeebebebbbbbbbbb---------------------------------------: Contact : bb queryA 102:FAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKG: 201 : : 1xtj_A_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 202:HVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPK----------ALI: 291 : * : 1xtj_A_1 69:---------------------------------------------------------------------------------------QLEPVTGQVSVLV: 81 SecStr :---------------------------------------------------------------------------------------H TT EEE: ExpBur :---------------------------------------------------------------------------------------ebeeeeeebbbbb: queryA 292:VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ: 390 : **** * * ** * * ** ** * ******** * *** *** * * * * : 1xtj_A_1 82:MCHTRELAFQISKEYERFSKYMPNVKVA--VFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLD---MRRDVQE: 176 SecStr :E SSHHHHHHHHHHHHHHSTT TT EE--EE TTS HHHHHHHHHHS SEEEE HHHHHHHHHHTSS TT EEEEESHHHHHTSHH---HHHHHHH: ExpBur :bbbeeeebeebbebbebbbeebeebeeb--ebeeeeeeeebeeebeeeebbbbbbbbebbbebbeeeebebeebebbbbbbbbebbeeee---beebbeb: Contact : bb queryA 391:IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-----HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW: 485 :* * * ** **** * * * * * * * * * * * * ** : 1xtj_A_1 177:IFRMTPHEK--QVMMFSATL-SKEIRPVCRKFMQDPMEIFVDDETKL--TLHGLQQYYVKLKDNEKNRKLFDLL--------DV----------------: 247 SecStr :HHHHS SSS--EEEEEESSS-TTT HHHHHHH SS EEEEE -- TTEEEEEEE TTTHHHHHHHHH--------HH----------------: ExpBur :bbeebeeeb--bbbbbbeee-beebeebbeebbeeeeebebeeeeee--ebeebebbebebeeeebeeebbebb--------ee----------------: queryA 486:SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP: 585 : * ** * * * * * * ** ** * * * ** * : 1xtj_A_1 248:------------------LEFNQVVIFVKSVQRCIALAQLLVEQN---------FPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLXXXXXDIERVN: 320 SecStr :------------------S S EEEE SSHHHHHHHHHHHHHTT--------- EEEE TTS HHHHHHHHHHHHSSS SEEEES ----- : ExpBur :------------------bebebbbbbbeeeeebeebbeebeeee---------bebbbbbeebebeeeeeeeeebeeeeeebbbbbee-----eeeebe: queryA 586:YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE: 624 : * * * ** * ** **** * * : 1xtj_A_1 321:IAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND: 359 SecStr :EEEESS SSHHHHHHHH SSS EEEEEEE SHHH: ExpBur :bbbbbbbbeebeebbebbbbeeeeeeebbbbbbbeeeeb: |