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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [230 aa] | Thrombin heavy chain :CTRA_BOVIN | |
2 | b | F 1 (F) | polymer(polypeptide(L)) [5 aa] | peptidic inhibitor | 296H 340K(L) 341T 342K(I) 419L(K) 436S 437C 438Q(M) 439G 441S 460S 461W 462G 463S (identity: 71.4 %/41.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1dlk_D_1 identity=41.0% |
queryA 256:IVGGESALPGAWPWQVSLHVQN-VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQ-SFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQK: 353 :** ** * ** ******* * **** * * ****** ** * * ** * * * **** * ** : 1dlk_D_1 1:IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVTTSD-----VVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLST: 95 SecStr : BT EE TTSSTTEEEEE TT EEEEEEEEETTEEEE GGG TTS-----EEEES SBTT S S EEEEEEEEEE TT TTT TT EEEEESS: ExpBur :bbeeeebeeeebbbbbbbbeeeeebebbbbbbeeebbbbbbebebeeeb-----bbbbebbbbeeeeeeeeebebeeebebeebeeeeebbbbbbbebee: Contact : b bbb queryA 354:PLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATE-EKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNI: 452 : * * **** * *** * * * * * * * ****** * ** ******** ** : 1dlk_D_1 96:AASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNC--KKYWGTKIKDAMICAG--ASGVSSCMGDSGGPLVCKKNGA: 191 SecStr : BTTB B TT TT EEEEEE SSTT SS SB EEEEEEB HHHH--HHHHGGG TTEEEEE-- SS B TT TT EEEEEETTE: ExpBur :ebeeeeebeebeebeeeeebeeeeebbbbbbbbeeeeeeeebeebbbbebebbebeeb--eeebeeebeebbbbbb--eeebbbbebbbbbbbbbeeeee: Contact : b bbbb b queryA 453:WWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491 :* * * **** **** * * * : 1dlk_D_1 192:WTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTLAAN: 230 SecStr :EEEEEEEEE TT TTSEEEEEEGGGTHHHHHHHHHT : ExpBur :ebbbbbbbbeeeebeeeebbbbbebbebbeebeebbeee: Contact : bbbb |