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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | C 1 (D) | polymer(polypeptide(L)) [242 aa] | Tryptase alpha/beta-1 :TRYB1_HUMAN | |
2 | b | G 1 (G) | polymer(polypeptide(L)) [217 aa] | Fab E104.v1 heavy chain | 304N(D) 309T(A) 312A(R) 324A(Q) 325G(L) 326Y(L) 327Q(P) 328V 329E(S) 352Q(E) 353K(E) (identity: 9.1 %/40.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6vvu_C_1 identity=40.3% |
queryA 256:IVGGESALPGAWPWQVSLHVQN---VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFY-GAGYQVEKVISHPNYDSKTKNNDIALMKL: 351 :**** * ******* * * **** * * * ****** * ** * * * ** **** *: 6vvu_C_1 31:IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCVGPDVKD---LAALRVQLREQHLYYQDQLLPVSRIIVHPQFYTAQIGADIALLEL: 127 SecStr : BS EE SSS TTEEEEEE SSS EEEEEEEEEETTEEEE HHHH SS ---GGGEEEE S SBTTTT EEEEEEEE TT S TTTS EEEEE: ExpBur :bbeeeebeeeebbbbbbbbeeeeeeebebbbbbbeeebbbbbbebbbeeeee---eebbebbbbebebeeeeeebebeeebebeebeebeebbbbbbbeb: Contact : b b b b bbbbbb queryA 352:QKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATE--EKGKTSEVLNAAKVLLIETQRCNSRYVYD-------NLITPAMICAGFLQGNVDSCQGDSG: 442 : * * * ** * ** *** * * ** * * * * *** ********: 6vvu_C_1 128:EEPVNVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDNDERLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAG--NTRRDSCQGDSG: 225 SecStr :SS SSS B TT TT EEEEESS SBTTB TT B EEEEE EE HHHHHHHHHTT S TTS SS TTEEEE -- SSSB TT TT: ExpBur :eeebeeeeebeebebbeeebebeeebebbbbbbbbbeeeeebeeeebbbbbebebeebeebbeebbeeeeeeeeeebbeebbbbbb--eeeebbbeebbb: Contact :bb queryA 443:GPLVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYR: 486 :**** * * * *** *** *** * * *** : 6vvu_C_1 226:GPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHH: 269 SecStr : EEEEEETTEEEEEEEEEE SSSSBTTB EEEEEGGGGHHHHHH: ExpBur :bbbbbebeeeebbbbbbbbeeebbeeebbbbbbbbbebbebbee: |