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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [243 aa] | Tryptase beta-2 :TRYB2_HUMAN | |
2 | b | G 1 (C) | non-polymer(5AM) | BENZYL {(1S)-5-AMINO-1-[(S)-HYDROXY(5-{[4-(4-PHENYLBUTANOYL)PIPERAZIN-1-YL]METHYL}-1,2,4-OXADIAZOL-3-YL)METHYL]PENTYL}CARBAMATE | 275V 280V(F) 296H 297C 298V 303N(K) 304N(D) 311F(L) 331V(I) 435D 436S 437C 438Q 439G 440D 441S 459T(V) 460S 461W 462G 464G 472G (identity: 72.7 %/40.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2gdd_C_1 identity=40.3% |
queryA 256:IVGGESALPGAWPWQVSLHVQN---VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFY-GAGYQVEKVISHPNYDSKTKNNDIALMKL: 351 :**** * ******* * * **** * * * ****** * ** * * * ** **** *: 2gdd_C_1 1:IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCVGPDVKD---LAALRVQLREQHLYYQDQLLPVSRIIVHPQFYTAQIGADIALLEL: 97 SecStr : BS EE TTS TTEEEEEE SSS EEEEEEEEEETTEEEE HHHH SS ---GGGEEEE SBTTTT EEEEEEEE TT S TTTS EEEEE: ExpBur :bbeeeebeeeebbbbbbbbeeeeebebebbbbbbbeebbbbbbebbbeeeee---eeebebbbbbbebeeeeeeeebeeebebeebeebeebbbbbbbeb: Contact : b b bbb bb b b queryA 352:QKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATE--EKGKTSEVLNAAKVLLIETQRCNSRYVYD-------NLITPAMICAGFLQGNVDSCQGDSG: 442 : * * * ** * ** *** * * ** * * * * *** ********: 2gdd_C_1 98:EEPVKVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDNDERLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAG--NTRRDSCQGDSG: 195 SecStr :SS SSS B TT TTS EEEEES SBTTB TT B EEEEE EE HHHHHHHHHTT S TTS SS TTEEEE -- SSSB TT TT: ExpBur :eeebeeeeebeebebbeeeeebeeeeebebbbbbbbeeeeebeeeebbbbbebebeebeebbeebbeeeeeeeeeebbeebbbbbb--eeeebbbeebbb: Contact : bbbbbbb queryA 443:GPLVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYR: 486 :**** * * * *** *** *** * * *** : 2gdd_C_1 196:GPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHH: 239 SecStr : EEEEE SSSEEEEEEEEE SSSSBTTB EEEEEGGGGHHHHTT: ExpBur :bbbbbebeeeebbbbbbbbeeebbeeebbbbbbbbbebbebbee: Contact : bbbb b b |