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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TMPS2_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [244 aa] | Tryptase alpha/beta-1 :TRYB1_HUMAN | |
2 | b | K 1 (K) | polymer(polypeptide(L)) [216 aa] | Fab E104.v1 light chain | 289E(Q) 329E(S) 330K(R) 350K(E) 351L 352Q(E) (identity: 16.7 %/40.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6vvu_B_1 identity=40.3% |
queryA 256:IVGGESALPGAWPWQVSLHVQN---VHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFY-GAGYQVEKVISHPNYDSKTKNNDIALMKL: 351 :**** * ******* * * **** * * * ****** * ** * * * ** **** *: 6vvu_B_1 31:IVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLTAAHCVGPDVKD---LAALRVQLREQHLYYQDQLLPVSRIIVHPQFYTAQIGADIALLEL: 127 SecStr : BS EE SSS TTEEEEEE SSS EEEEEEEEEETTEEEE GGGT SS ---GGGEEEE S SBTTTT EEEEEEEE TT S TTTS EEEEE: ExpBur :bbeeeebeeeebbbbbbbbeeeeeeebebbbbbbeeebbbbbbebbbeeeee---eebbebbbbebebeeeeeebebeeebebeebeebeebbbbbbbeb: Contact : b bb bb queryA 352:QKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATE--EKGKTSEVLNAAKVLLIETQRCNSRYVYD-------NLITPAMICAGFLQGNVDSCQGDSG: 442 : * * * ** * ** *** * * ** * * * * *** ********: 6vvu_B_1 128:EEPVNVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDNDERLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAG--NTRRDSCQGDSG: 225 SecStr :SS SSS B TT TT EEEEESS SBTTB TT B EEEEE EE HHHHHHHHHTT S TTS SS TTEEEE -- SSSB TT TT: ExpBur :eeebeeeeebebbebbeeebebeeebebebbbbbbbeeeeebeeeebbbbbebebeebeebbeebbeeeeeeeeeebbeebbbbbb--eeeebbbeebbb: Contact :b queryA 443:GPLVTSKNNIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYR: 486 :**** * * * *** *** *** * * *** : 6vvu_B_1 226:GPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHH: 269 SecStr : EEEEEETTEEEEEEEEEE SSSSBTTB EEEEEGGGGHHHHHH: ExpBur :bbbbbebeeeebbbbbbbbeeebbeeebbbbbbbbbebbebbee: |