Protein Model on 1kjw_A_1 focusing on 451-th site
(TEMPLATE: 
1kjw
)Protein Model on 1kjw_A_1 focusing on 451-th site
(TEMPLATE: 1kjw
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| FOCUSED SITES | template(1kjw_A auth_asym_id:A) | ||||||
| SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
| 451 | N | 79 | 508 | G | e | 63.1 | |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
| 1 | a | A(PALS1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [292 aa] | POSTSYNAPTIC DENSITY PROTEIN 95 :DLG4_RAT | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1kjw_A_1 identity=36.6% |
queryA 348:IHVKAHFDYDPSDDPYVPCREL--GLSFQKGDILHVISQEDPNWWQAYREGDEDNQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKKR: 445
: * **** * * * *** ** **** * **** * * * * ** * :
1kjw_A_1 2:FYIRALFDYDKTKD----CGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVERRE------------------W------SRL: 73
SecStr :EEEEESS B HHHH----H SSB B TT EEEEEE SSSEEEEEE SS S EEEE HHHHHHHH------------------H------TS :
ExpBur :eebbbbbebeeeee----eeeeeeebebebebbbbbeeeeeebebebbebeeeeeeeeebebbbeeebbeee------------------e------eee:
queryA 446:KKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKRPIILIGPQNCGQNELRQRLMNKEKDRFASAVPHTTRSRRDQEVAGRDYHFVS-RQAFEADIAAGK: 544
:* * ** **** ** * * * * * ****** * * ******** * * ** * *:
1kjw_A_1 74:KXXXWGSSSGSQGREDSVLSYETVT--QMEVHYARPIIILGPTKDRAND---DLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEKDIQAHK: 168
SecStr : --- S SS EEEEE--EEE S EEEESTTHHHHHH---HHHHH TTTEE EE S TT BTTTBEE S HHHHHHHHHTT :
ExpBur :e---eeeeeeeeeeeeeeebbbbbe--eeebebbbbbbbbebbeeebbe---ebeeeeeeebbebeeebbbeeeeebeeeeeeebbeeeeebeeeeeeee:
queryA 545:FIEHGEFEKNLYGTSIDSVRQVINSGKICLLSLRTQSLKTLRNSDLKPYIIFIAPPSQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIV: 644
:*** * ***** *** * ** * * * * * *** * * * * * * ** * :
1kjw_A_1 169:FIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAHLHPIAIFIRPRSLENVLEI----NKRITEEQARKAFDRATKLEQEFTECFSAIVE: 264
SecStr :EEEEEEETTEEEEEEHHHHHHHHHTT EEEE TTHHHHHHHTT EEEEE SSHHHHHHH---- TTS HHHHHHHHHHHHHHHHHHGGG SEEE :
ExpBur :bbeeeeeeeebbbbbbebbeebbeeeebbbbebebebbeebbebebbbbbbbbbbeeeebbeeb----eeeeeeeebeebeeebeeeeeebbebbbbbbe:
queryA 645:NSDLDKAYQELLRLINKLDTEPQWVPS: 671
: * * * * *** :
1kjw_A_1 265:GDSFEEIYHKVKRVIEDLSGPYIWVPA: 291
SecStr : SSHHHHHHHHHHHHHHHS SEEEEE :
ExpBur :beebeebbeebeebbeeeeeeebebeb:
|
[assembly_id:1]
[help]