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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
FOCUSED SITES | template(1jxo_B auth_asym_id:B) | ||||||
SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
438 | A | 78 | 501 | R | H | e | 21.3 |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(PALS1_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [264 aa] | postsynaptic density protein :DLG4_RAT |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1jxo_B_1 identity=36.2% |
queryA 348:IHVKAHFDYDPSDDPYVPCREL--GLSFQKGDILHVISQEDPNWWQAYREGDEDNQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKKR: 445 : * **** * * * *** ** **** * **** * * * * ** * * * : 1jxo_B_1 8:FYIRALFDYDKTKD----CGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHXXXXXXXIGFIPSKRRVERRE------------------WSRLKAKD--: 83 SecStr :EEEEESS B HHHH----H SSB B TT EEEEEE SSSEEEEEE ------- EEEE HHHHHHHH------------------HHHHHTTT--: ExpBur :eebbbbeebebeee----eeeeeeeeebbbbebbebeeeeeeeebebbbee-------ebebbbeeebbeee------------------eeeeeeee--: queryA 446:KKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKRPIILIGPQNCGQNELRQRLMNKEKDRFASAVPHTTRSRRDQEVAGRDYHFVS-RQAFEADIAAGK: 544 : * ** **** ** * * * * * ****** ******** * * ** * *: 1jxo_B_1 84:----WGXXXXXXXXXXXVLSYETVT--QMEVHYARPIIILGPTKDRAND---DLLSEFPDKFGSCVPHTTRXXXXXXXDGRDYHFVSSREKMEKDIQAHK: 174 SecStr :----T ----------- EEEEE--EEE SS EEEESTTHHHHHH---HHHHH TTTEE EE ------- SS EE S HHHHHHHHHTT : ExpBur :----ee-----------eebbeebe--eeebebbbbbbbbebbeeebbe---ebeeeeeebbbebeeebbe-------eeeeeeebeeeebbeeeeeeeb: queryA 545:FIEHGEFEKNLYGTSIDSVRQVINSGKICLLSLRTQSLKTLRNSDLKPYIIFIAPPSQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIV: 644 :*** * ***** *** * ** * * * * * *** * * * * * * ** * : 1jxo_B_1 175:FIEAGQXXSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAHLHPIAIFIRPRSLENVLEI----NKRITEEQARKAFDRATKLEQEFTECFSAIVE: 270 SecStr :EEEEE -- EEEEHHHHHHHHHTTSEEB THHHHHHHHTT EEEEE SSHHHHHHH---- TTS HHHHHHHHHHHHHHHHHHGGG SEEE : ExpBur :bbeeee--eebebbbbebbeebbeeeebbbbebebebbeebeebebbbbbbbbbbeeeebbeeb----eeeeeeeebbebeeebeeeeeebbbbbbbbbe: queryA 645:NSDLDKAYQELLRLINKLDTEPQWVPS: 671 : * * * * *** : 1jxo_B_1 271:GDSFEEIYHKVKRVIEDLSGPYIWVPA: 297 SecStr : SSHHHHHHHHHHHHHHT SSEEEEE : ExpBur :beebeebbeebeebbeeeeeeebebee: |