PSIBLAST 2.11.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Stephen F. Altschul, John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: uniprot_sprot.fasta 570,830 sequences; 206,533,160 total letters Results from round 1 Query= YP_009725297.1 leader protein [Severe acute respiratory syndrome coronavirus 2] Length=180 Score E Sequences producing significant alignments: (Bits) Value sp|P0DTC1|R1A_SARS2 Replicase polyprotein 1a OS=Severe acute resp... 386 2e-123 sp|P0DTD1|R1AB_SARS2 Replicase polyprotein 1ab OS=Severe acute re... 386 2e-123 sp|P0C6U8|R1A_SARS Replicase polyprotein 1a OS=Severe acute respi... 328 2e-103 sp|P0C6X7|R1AB_SARS Replicase polyprotein 1ab OS=Severe acute res... 328 2e-103 sp|P0C6F8|R1A_BCHK3 Replicase polyprotein 1a OS=Bat coronavirus H... 326 1e-102 sp|P0C6W2|R1AB_BCHK3 Replicase polyprotein 1ab OS=Bat coronavirus... 326 1e-102 sp|P0C6T7|R1A_BCRP3 Replicase polyprotein 1a OS=Bat coronavirus R... 322 3e-101 sp|P0C6W6|R1AB_BCRP3 Replicase polyprotein 1ab OS=Bat coronavirus... 322 3e-101 sp|P0C6F5|R1A_BC279 Replicase polyprotein 1a OS=Bat coronavirus 2... 320 1e-100 sp|P0C6V9|R1AB_BC279 Replicase polyprotein 1ab OS=Bat coronavirus... 320 1e-100 sp|P0C6T6|R1A_BCHK9 Replicase polyprotein 1a OS=Bat coronavirus H... 36.2 0.14 sp|P0C6W5|R1AB_BCHK9 Replicase polyprotein 1ab OS=Bat coronavirus... 36.2 0.14 sp|Q06R82|RK32_JASNU Large ribosomal subunit protein bL32c OS=Jas... 30.4 2.1 sp|A0A125SXN2|LCD_LYCCL Alpha-onocerin synthase LCD OS=Lycopodium... 30.8 7.1 >sp|P0DTC1|R1A_SARS2 Replicase polyprotein 1a OS=Severe acute respiratory syndrome coronavirus 2 OX=2697049 PE=1 SV=1 Length=4405 Score = 386 bits (992), Expect = 2e-123, Method: Composition-based stats. Identities = 180/180 (100%), Positives = 180/180 (100%), Gaps = 0/180 (0%) Query 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV Sbjct 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 Query 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK Sbjct 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 Query 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG Sbjct 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 >sp|P0DTD1|R1AB_SARS2 Replicase polyprotein 1ab OS=Severe acute respiratory syndrome coronavirus 2 OX=2697049 GN=rep PE=1 SV=1 Length=7096 Score = 386 bits (992), Expect = 2e-123, Method: Composition-based stats. Identities = 180/180 (100%), Positives = 180/180 (100%), Gaps = 0/180 (0%) Query 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV Sbjct 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 Query 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK Sbjct 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 Query 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG Sbjct 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 >sp|P0C6U8|R1A_SARS Replicase polyprotein 1a OS=Severe acute respiratory syndrome coronavirus OX=694009 GN=1a PE=1 SV=1 Length=4382 Score = 328 bits (842), Expect = 2e-103, Method: Composition-based stats. Identities = 152/180 (84%), Positives = 164/180 (91%), Gaps = 0/180 (0%) Query 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 MESLV G NEKTHVQLSLPVLQVRDVLVRGFGDSVEE LSEAR+HLK+GTCGLVE+EKGV Sbjct 1 MESLVLGVNEKTHVQLSLPVLQVRDVLVRGFGDSVEEALSEAREHLKNGTCGLVELEKGV 60 Query 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 LPQLEQPYVFIKRSDA + HGH +VELVAE++GIQYGRSG TLGVLVPHVGE P+AYR Sbjct 61 LPQLEQPYVFIKRSDALSTNHGHKVVELVAEMDGIQYGRSGITLGVLVPHVGETPIAYRN 120 Query 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 VLLRKNGNKGAGGHSYG DLKS+DLGDELGTDP ED+++NWNTKH SG REL RELNGG Sbjct 121 VLLRKNGNKGAGGHSYGIDLKSYDLGDELGTDPIEDYEQNWNTKHGSGALRELTRELNGG 180 >sp|P0C6X7|R1AB_SARS Replicase polyprotein 1ab OS=Severe acute respiratory syndrome coronavirus OX=694009 GN=rep PE=1 SV=1 Length=7073 Score = 328 bits (842), Expect = 2e-103, Method: Composition-based stats. Identities = 152/180 (84%), Positives = 164/180 (91%), Gaps = 0/180 (0%) Query 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 MESLV G NEKTHVQLSLPVLQVRDVLVRGFGDSVEE LSEAR+HLK+GTCGLVE+EKGV Sbjct 1 MESLVLGVNEKTHVQLSLPVLQVRDVLVRGFGDSVEEALSEAREHLKNGTCGLVELEKGV 60 Query 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 LPQLEQPYVFIKRSDA + HGH +VELVAE++GIQYGRSG TLGVLVPHVGE P+AYR Sbjct 61 LPQLEQPYVFIKRSDALSTNHGHKVVELVAEMDGIQYGRSGITLGVLVPHVGETPIAYRN 120 Query 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 VLLRKNGNKGAGGHSYG DLKS+DLGDELGTDP ED+++NWNTKH SG REL RELNGG Sbjct 121 VLLRKNGNKGAGGHSYGIDLKSYDLGDELGTDPIEDYEQNWNTKHGSGALRELTRELNGG 180 >sp|P0C6F8|R1A_BCHK3 Replicase polyprotein 1a OS=Bat coronavirus HKU3 OX=442736 GN=1a PE=3 SV=1 Length=4376 Score = 326 bits (836), Expect = 1e-102, Method: Composition-based stats. Identities = 151/180 (84%), Positives = 164/180 (91%), Gaps = 0/180 (0%) Query 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 MESLV G NEKTHVQLSLPVLQVRDVLVRGFGDSVEE LSEAR+HLK+GTCGLVE+EKGV Sbjct 1 MESLVLGVNEKTHVQLSLPVLQVRDVLVRGFGDSVEEALSEAREHLKNGTCGLVELEKGV 60 Query 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 LPQLEQPYVFIKRSDA + HGH +VELVAEL+GIQ+GRSG TLGVLVPHVGE P+AYR Sbjct 61 LPQLEQPYVFIKRSDALSTNHGHKVVELVAELDGIQFGRSGITLGVLVPHVGETPIAYRN 120 Query 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 VLLRKNGNKGAGGHS+G DLKS+DLGDELGTDP ED+++NWNTKH SG REL RELNGG Sbjct 121 VLLRKNGNKGAGGHSFGIDLKSYDLGDELGTDPIEDYEQNWNTKHGSGALRELTRELNGG 180 >sp|P0C6W2|R1AB_BCHK3 Replicase polyprotein 1ab OS=Bat coronavirus HKU3 OX=442736 GN=rep PE=3 SV=1 Length=7067 Score = 326 bits (836), Expect = 1e-102, Method: Composition-based stats. Identities = 151/180 (84%), Positives = 164/180 (91%), Gaps = 0/180 (0%) Query 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 MESLV G NEKTHVQLSLPVLQVRDVLVRGFGDSVEE LSEAR+HLK+GTCGLVE+EKGV Sbjct 1 MESLVLGVNEKTHVQLSLPVLQVRDVLVRGFGDSVEEALSEAREHLKNGTCGLVELEKGV 60 Query 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 LPQLEQPYVFIKRSDA + HGH +VELVAEL+GIQ+GRSG TLGVLVPHVGE P+AYR Sbjct 61 LPQLEQPYVFIKRSDALSTNHGHKVVELVAELDGIQFGRSGITLGVLVPHVGETPIAYRN 120 Query 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 VLLRKNGNKGAGGHS+G DLKS+DLGDELGTDP ED+++NWNTKH SG REL RELNGG Sbjct 121 VLLRKNGNKGAGGHSFGIDLKSYDLGDELGTDPIEDYEQNWNTKHGSGALRELTRELNGG 180 >sp|P0C6T7|R1A_BCRP3 Replicase polyprotein 1a OS=Bat coronavirus Rp3/2004 OX=349344 GN=1a PE=3 SV=1 Length=4380 Score = 322 bits (826), Expect = 3e-101, Method: Composition-based stats. Identities = 149/180 (83%), Positives = 162/180 (90%), Gaps = 0/180 (0%) Query 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 MESLV G NEKTHVQLSLPVLQVRDVLVRGFGDSVEE LSEAR+HLK GTCG+VE+EKGV Sbjct 1 MESLVLGINEKTHVQLSLPVLQVRDVLVRGFGDSVEEALSEAREHLKSGTCGIVELEKGV 60 Query 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 LPQ EQPYVFIKRSDA+ HGH + ELVAEL+G+QYGRSG TLGVLVPHVGE P+AYR Sbjct 61 LPQPEQPYVFIKRSDAQGTDHGHRVRELVAELDGVQYGRSGITLGVLVPHVGETPIAYRN 120 Query 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 VLLRKNGNKGAGGHS+G DLKS+DLGDELGTDP ED+++NWNTKH SGV REL RELNGG Sbjct 121 VLLRKNGNKGAGGHSFGIDLKSYDLGDELGTDPIEDYEQNWNTKHGSGVLRELTRELNGG 180 >sp|P0C6W6|R1AB_BCRP3 Replicase polyprotein 1ab OS=Bat coronavirus Rp3/2004 OX=349344 GN=rep PE=3 SV=1 Length=7071 Score = 322 bits (826), Expect = 3e-101, Method: Composition-based stats. Identities = 149/180 (83%), Positives = 162/180 (90%), Gaps = 0/180 (0%) Query 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 MESLV G NEKTHVQLSLPVLQVRDVLVRGFGDSVEE LSEAR+HLK GTCG+VE+EKGV Sbjct 1 MESLVLGINEKTHVQLSLPVLQVRDVLVRGFGDSVEEALSEAREHLKSGTCGIVELEKGV 60 Query 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 LPQ EQPYVFIKRSDA+ HGH + ELVAEL+G+QYGRSG TLGVLVPHVGE P+AYR Sbjct 61 LPQPEQPYVFIKRSDAQGTDHGHRVRELVAELDGVQYGRSGITLGVLVPHVGETPIAYRN 120 Query 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 VLLRKNGNKGAGGHS+G DLKS+DLGDELGTDP ED+++NWNTKH SGV REL RELNGG Sbjct 121 VLLRKNGNKGAGGHSFGIDLKSYDLGDELGTDPIEDYEQNWNTKHGSGVLRELTRELNGG 180 >sp|P0C6F5|R1A_BC279 Replicase polyprotein 1a OS=Bat coronavirus 279/2005 OX=389167 GN=1a PE=3 SV=1 Length=4388 Score = 320 bits (821), Expect = 1e-100, Method: Composition-based stats. Identities = 149/180 (83%), Positives = 163/180 (91%), Gaps = 0/180 (0%) Query 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 MESL G +EKTHVQLSLPVLQVRDVLVRGFGDSVEE L+EAR+HLK+GTCGLVE+EKGV Sbjct 1 MESLALGVSEKTHVQLSLPVLQVRDVLVRGFGDSVEEALAEAREHLKNGTCGLVELEKGV 60 Query 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 LPQLEQPYVFIKRSDA+ HG+ +VELVAEL+GIQYGRSG TLGVLVPHVGE PVAYR Sbjct 61 LPQLEQPYVFIKRSDAQGTNHGYKVVELVAELDGIQYGRSGTTLGVLVPHVGETPVAYRN 120 Query 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 VLLRKNGNKGAGGHSYG DLKS+DLG ELGTDP ED+++NWNTKH GV REL+RELNGG Sbjct 121 VLLRKNGNKGAGGHSYGIDLKSYDLGVELGTDPIEDYEQNWNTKHGGGVLRELIRELNGG 180 >sp|P0C6V9|R1AB_BC279 Replicase polyprotein 1ab OS=Bat coronavirus 279/2005 OX=389167 GN=rep PE=3 SV=1 Length=7079 Score = 320 bits (821), Expect = 1e-100, Method: Composition-based stats. Identities = 149/180 (83%), Positives = 163/180 (91%), Gaps = 0/180 (0%) Query 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 MESL G +EKTHVQLSLPVLQVRDVLVRGFGDSVEE L+EAR+HLK+GTCGLVE+EKGV Sbjct 1 MESLALGVSEKTHVQLSLPVLQVRDVLVRGFGDSVEEALAEAREHLKNGTCGLVELEKGV 60 Query 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 LPQLEQPYVFIKRSDA+ HG+ +VELVAEL+GIQYGRSG TLGVLVPHVGE PVAYR Sbjct 61 LPQLEQPYVFIKRSDAQGTNHGYKVVELVAELDGIQYGRSGTTLGVLVPHVGETPVAYRN 120 Query 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 VLLRKNGNKGAGGHSYG DLKS+DLG ELGTDP ED+++NWNTKH GV REL+RELNGG Sbjct 121 VLLRKNGNKGAGGHSYGIDLKSYDLGVELGTDPIEDYEQNWNTKHGGGVLRELIRELNGG 180 >sp|P0C6T6|R1A_BCHK9 Replicase polyprotein 1a OS=Bat coronavirus HKU9 OX=694006 GN=1a PE=3 SV=1 Length=4248 Score = 36.2 bits (82), Expect = 0.14, Method: Composition-based stats. Identities = 44/144 (31%), Positives = 63/144 (44%), Gaps = 20/144 (14%) Query 28 VRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV--LPQLEQPYVFIKRSDARTAPHG-HV 84 V G+ +EE L A+Q L+ LV V + P + V I S G Sbjct 29 VTGWDIPIEEALEYAKQQLRTPEPQLVFVPYYLSHAPGISGDRVVITDSIWYATNFGWQP 88 Query 85 MVELVAELEGIQYGRSGETLGVLVPH------VGEIPVAYRKVLLRKNGNKGAGGHSYGA 138 + EL + +G++YGR G T GVL+P +G+I + RK G G +S Sbjct 89 IRELAMDKDGVRYGRGG-THGVLLPMQDPSFIMGDIDIQIRKY--------GIGANSPPD 139 Query 139 DLKSFDLGDELGTD--PYEDFQEN 160 L +D + G D PY DF +N Sbjct 140 VLPLWDGFSDPGPDVGPYLDFPDN 163 >sp|P0C6W5|R1AB_BCHK9 Replicase polyprotein 1ab OS=Bat coronavirus HKU9 OX=694006 GN=rep PE=1 SV=1 Length=6930 Score = 36.2 bits (82), Expect = 0.14, Method: Composition-based stats. Identities = 44/144 (31%), Positives = 63/144 (44%), Gaps = 20/144 (14%) Query 28 VRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV--LPQLEQPYVFIKRSDARTAPHG-HV 84 V G+ +EE L A+Q L+ LV V + P + V I S G Sbjct 29 VTGWDIPIEEALEYAKQQLRTPEPQLVFVPYYLSHAPGISGDRVVITDSIWYATNFGWQP 88 Query 85 MVELVAELEGIQYGRSGETLGVLVPH------VGEIPVAYRKVLLRKNGNKGAGGHSYGA 138 + EL + +G++YGR G T GVL+P +G+I + RK G G +S Sbjct 89 IRELAMDKDGVRYGRGG-THGVLLPMQDPSFIMGDIDIQIRKY--------GIGANSPPD 139 Query 139 DLKSFDLGDELGTD--PYEDFQEN 160 L +D + G D PY DF +N Sbjct 140 VLPLWDGFSDPGPDVGPYLDFPDN 163 >sp|Q06R82|RK32_JASNU Large ribosomal subunit protein bL32c OS=Jasminum nudiflorum OX=126431 GN=rpl32 PE=3 SV=1 Length=73 Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust. Identities = 17/38 (45%), Positives = 20/38 (53%), Gaps = 3/38 (8%) Query 120 KVLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDF 157 K +RKN KG G YG LK+F LG L T + F Sbjct 12 KKRIRKNSWKGKG---YGTALKAFSLGKSLSTGNSKSF 46 >sp|A0A125SXN2|LCD_LYCCL Alpha-onocerin synthase LCD OS=Lycopodium clavatum OX=3252 GN=LCD PE=1 SV=1 Length=766 Score = 30.8 bits (68), Expect = 7.1, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 31/74 (42%), Gaps = 15/74 (20%) Query 107 LVPHVGEIPVAYRKVLLRKNGNKGAGGHSYGADLKSF------DLGDELGTDPYEDFQEN 160 L+ H G +PV YR + L + + Y L DL EL T PYED + Sbjct 253 LIAHPGRLPVLYRFIFLPMS-------YIYARRLSHHLTKIIEDLRKELYTIPYEDI--D 303 Query 161 WNTKHSSGVTRELM 174 WN G E++ Sbjct 304 WNHARKLGAKEEIV 317 Lambda K H a alpha 0.315 0.137 0.399 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 9878801070 Results from round 2 Query= YP_009725297.1 leader protein [Severe acute respiratory syndrome coronavirus 2] Length=180 Score E Sequences producing significant alignments: (Bits) Value Sequences used in model and found again: sp|P0C6U8|R1A_SARS Replicase polyprotein 1a OS=Severe acute respi... 373 9e-119 sp|P0C6X7|R1AB_SARS Replicase polyprotein 1ab OS=Severe acute res... 373 9e-119 sp|P0C6T7|R1A_BCRP3 Replicase polyprotein 1a OS=Bat coronavirus R... 372 1e-118 sp|P0C6W6|R1AB_BCRP3 Replicase polyprotein 1ab OS=Bat coronavirus... 372 1e-118 sp|P0C6F8|R1A_BCHK3 Replicase polyprotein 1a OS=Bat coronavirus H... 370 5e-118 sp|P0C6W2|R1AB_BCHK3 Replicase polyprotein 1ab OS=Bat coronavirus... 370 6e-118 sp|P0C6F5|R1A_BC279 Replicase polyprotein 1a OS=Bat coronavirus 2... 368 2e-117 sp|P0C6V9|R1AB_BC279 Replicase polyprotein 1ab OS=Bat coronavirus... 368 2e-117 sp|P0DTC1|R1A_SARS2 Replicase polyprotein 1a OS=Severe acute resp... 361 7e-115 sp|P0DTD1|R1AB_SARS2 Replicase polyprotein 1ab OS=Severe acute re... 361 7e-115 Sequences not found previously or not previously below threshold: sp|P0C6T6|R1A_BCHK9 Replicase polyprotein 1a OS=Bat coronavirus H... 41.9 0.002 sp|P0C6W5|R1AB_BCHK9 Replicase polyprotein 1ab OS=Bat coronavirus... 41.9 0.002 sp|O60494|CUBN_HUMAN Cubilin OS=Homo sapiens OX=9606 GN=CUBN PE=1... 36.9 0.080 sp|Q9TU53|CUBN_CANLF Cubilin OS=Canis lupus familiaris OX=9615 GN... 34.6 0.56 sp|F1RWC3|CUBN_PIG Cubilin OS=Sus scrofa OX=9823 GN=CUBN PE=1 SV=3 33.0 1.4 sp|O07685|BGAM_LACAC Beta-galactosidase small subunit OS=Lactobac... 32.6 1.8 sp|Q8ST44|Y7I5_ENCCU UPF0329 protein ECU07_1850/ECU10_0050 OS=Enc... 31.1 5.7 sp|Q8STZ1|YBK9_ENCCU UPF0329 protein ECU11_2090 OS=Encephalitozoo... 31.1 6.3 sp|Q06530|DHSU_ALLVD Sulfide dehydrogenase [flavocytochrome c] fl... 30.7 7.2 >sp|P0C6U8|R1A_SARS Replicase polyprotein 1a OS=Severe acute respiratory syndrome coronavirus OX=694009 GN=1a PE=1 SV=1 Length=4382 Score = 373 bits (957), Expect = 9e-119, Method: Composition-based stats. Identities = 152/180 (84%), Positives = 164/180 (91%), Gaps = 0/180 (0%) Query 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 MESLV G NEKTHVQLSLPVLQVRDVLVRGFGDSVEE LSEAR+HLK+GTCGLVE+EKGV Sbjct 1 MESLVLGVNEKTHVQLSLPVLQVRDVLVRGFGDSVEEALSEAREHLKNGTCGLVELEKGV 60 Query 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 LPQLEQPYVFIKRSDA + HGH +VELVAE++GIQYGRSG TLGVLVPHVGE P+AYR Sbjct 61 LPQLEQPYVFIKRSDALSTNHGHKVVELVAEMDGIQYGRSGITLGVLVPHVGETPIAYRN 120 Query 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 VLLRKNGNKGAGGHSYG DLKS+DLGDELGTDP ED+++NWNTKH SG REL RELNGG Sbjct 121 VLLRKNGNKGAGGHSYGIDLKSYDLGDELGTDPIEDYEQNWNTKHGSGALRELTRELNGG 180 >sp|P0C6X7|R1AB_SARS Replicase polyprotein 1ab OS=Severe acute respiratory syndrome coronavirus OX=694009 GN=rep PE=1 SV=1 Length=7073 Score = 373 bits (957), Expect = 9e-119, Method: Composition-based stats. Identities = 152/180 (84%), Positives = 164/180 (91%), Gaps = 0/180 (0%) Query 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 MESLV G NEKTHVQLSLPVLQVRDVLVRGFGDSVEE LSEAR+HLK+GTCGLVE+EKGV Sbjct 1 MESLVLGVNEKTHVQLSLPVLQVRDVLVRGFGDSVEEALSEAREHLKNGTCGLVELEKGV 60 Query 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 LPQLEQPYVFIKRSDA + HGH +VELVAE++GIQYGRSG TLGVLVPHVGE P+AYR Sbjct 61 LPQLEQPYVFIKRSDALSTNHGHKVVELVAEMDGIQYGRSGITLGVLVPHVGETPIAYRN 120 Query 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 VLLRKNGNKGAGGHSYG DLKS+DLGDELGTDP ED+++NWNTKH SG REL RELNGG Sbjct 121 VLLRKNGNKGAGGHSYGIDLKSYDLGDELGTDPIEDYEQNWNTKHGSGALRELTRELNGG 180 >sp|P0C6T7|R1A_BCRP3 Replicase polyprotein 1a OS=Bat coronavirus Rp3/2004 OX=349344 GN=1a PE=3 SV=1 Length=4380 Score = 372 bits (955), Expect = 1e-118, Method: Composition-based stats. Identities = 149/180 (83%), Positives = 162/180 (90%), Gaps = 0/180 (0%) Query 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 MESLV G NEKTHVQLSLPVLQVRDVLVRGFGDSVEE LSEAR+HLK GTCG+VE+EKGV Sbjct 1 MESLVLGINEKTHVQLSLPVLQVRDVLVRGFGDSVEEALSEAREHLKSGTCGIVELEKGV 60 Query 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 LPQ EQPYVFIKRSDA+ HGH + ELVAEL+G+QYGRSG TLGVLVPHVGE P+AYR Sbjct 61 LPQPEQPYVFIKRSDAQGTDHGHRVRELVAELDGVQYGRSGITLGVLVPHVGETPIAYRN 120 Query 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 VLLRKNGNKGAGGHS+G DLKS+DLGDELGTDP ED+++NWNTKH SGV REL RELNGG Sbjct 121 VLLRKNGNKGAGGHSFGIDLKSYDLGDELGTDPIEDYEQNWNTKHGSGVLRELTRELNGG 180 >sp|P0C6W6|R1AB_BCRP3 Replicase polyprotein 1ab OS=Bat coronavirus Rp3/2004 OX=349344 GN=rep PE=3 SV=1 Length=7071 Score = 372 bits (955), Expect = 1e-118, Method: Composition-based stats. Identities = 149/180 (83%), Positives = 162/180 (90%), Gaps = 0/180 (0%) Query 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 MESLV G NEKTHVQLSLPVLQVRDVLVRGFGDSVEE LSEAR+HLK GTCG+VE+EKGV Sbjct 1 MESLVLGINEKTHVQLSLPVLQVRDVLVRGFGDSVEEALSEAREHLKSGTCGIVELEKGV 60 Query 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 LPQ EQPYVFIKRSDA+ HGH + ELVAEL+G+QYGRSG TLGVLVPHVGE P+AYR Sbjct 61 LPQPEQPYVFIKRSDAQGTDHGHRVRELVAELDGVQYGRSGITLGVLVPHVGETPIAYRN 120 Query 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 VLLRKNGNKGAGGHS+G DLKS+DLGDELGTDP ED+++NWNTKH SGV REL RELNGG Sbjct 121 VLLRKNGNKGAGGHSFGIDLKSYDLGDELGTDPIEDYEQNWNTKHGSGVLRELTRELNGG 180 >sp|P0C6F8|R1A_BCHK3 Replicase polyprotein 1a OS=Bat coronavirus HKU3 OX=442736 GN=1a PE=3 SV=1 Length=4376 Score = 370 bits (951), Expect = 5e-118, Method: Composition-based stats. Identities = 151/180 (84%), Positives = 164/180 (91%), Gaps = 0/180 (0%) Query 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 MESLV G NEKTHVQLSLPVLQVRDVLVRGFGDSVEE LSEAR+HLK+GTCGLVE+EKGV Sbjct 1 MESLVLGVNEKTHVQLSLPVLQVRDVLVRGFGDSVEEALSEAREHLKNGTCGLVELEKGV 60 Query 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 LPQLEQPYVFIKRSDA + HGH +VELVAEL+GIQ+GRSG TLGVLVPHVGE P+AYR Sbjct 61 LPQLEQPYVFIKRSDALSTNHGHKVVELVAELDGIQFGRSGITLGVLVPHVGETPIAYRN 120 Query 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 VLLRKNGNKGAGGHS+G DLKS+DLGDELGTDP ED+++NWNTKH SG REL RELNGG Sbjct 121 VLLRKNGNKGAGGHSFGIDLKSYDLGDELGTDPIEDYEQNWNTKHGSGALRELTRELNGG 180 >sp|P0C6W2|R1AB_BCHK3 Replicase polyprotein 1ab OS=Bat coronavirus HKU3 OX=442736 GN=rep PE=3 SV=1 Length=7067 Score = 370 bits (951), Expect = 6e-118, Method: Composition-based stats. Identities = 151/180 (84%), Positives = 164/180 (91%), Gaps = 0/180 (0%) Query 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 MESLV G NEKTHVQLSLPVLQVRDVLVRGFGDSVEE LSEAR+HLK+GTCGLVE+EKGV Sbjct 1 MESLVLGVNEKTHVQLSLPVLQVRDVLVRGFGDSVEEALSEAREHLKNGTCGLVELEKGV 60 Query 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 LPQLEQPYVFIKRSDA + HGH +VELVAEL+GIQ+GRSG TLGVLVPHVGE P+AYR Sbjct 61 LPQLEQPYVFIKRSDALSTNHGHKVVELVAELDGIQFGRSGITLGVLVPHVGETPIAYRN 120 Query 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 VLLRKNGNKGAGGHS+G DLKS+DLGDELGTDP ED+++NWNTKH SG REL RELNGG Sbjct 121 VLLRKNGNKGAGGHSFGIDLKSYDLGDELGTDPIEDYEQNWNTKHGSGALRELTRELNGG 180 >sp|P0C6F5|R1A_BC279 Replicase polyprotein 1a OS=Bat coronavirus 279/2005 OX=389167 GN=1a PE=3 SV=1 Length=4388 Score = 368 bits (946), Expect = 2e-117, Method: Composition-based stats. Identities = 149/180 (83%), Positives = 163/180 (91%), Gaps = 0/180 (0%) Query 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 MESL G +EKTHVQLSLPVLQVRDVLVRGFGDSVEE L+EAR+HLK+GTCGLVE+EKGV Sbjct 1 MESLALGVSEKTHVQLSLPVLQVRDVLVRGFGDSVEEALAEAREHLKNGTCGLVELEKGV 60 Query 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 LPQLEQPYVFIKRSDA+ HG+ +VELVAEL+GIQYGRSG TLGVLVPHVGE PVAYR Sbjct 61 LPQLEQPYVFIKRSDAQGTNHGYKVVELVAELDGIQYGRSGTTLGVLVPHVGETPVAYRN 120 Query 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 VLLRKNGNKGAGGHSYG DLKS+DLG ELGTDP ED+++NWNTKH GV REL+RELNGG Sbjct 121 VLLRKNGNKGAGGHSYGIDLKSYDLGVELGTDPIEDYEQNWNTKHGGGVLRELIRELNGG 180 >sp|P0C6V9|R1AB_BC279 Replicase polyprotein 1ab OS=Bat coronavirus 279/2005 OX=389167 GN=rep PE=3 SV=1 Length=7079 Score = 368 bits (946), Expect = 2e-117, Method: Composition-based stats. Identities = 149/180 (83%), Positives = 163/180 (91%), Gaps = 0/180 (0%) Query 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 MESL G +EKTHVQLSLPVLQVRDVLVRGFGDSVEE L+EAR+HLK+GTCGLVE+EKGV Sbjct 1 MESLALGVSEKTHVQLSLPVLQVRDVLVRGFGDSVEEALAEAREHLKNGTCGLVELEKGV 60 Query 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 LPQLEQPYVFIKRSDA+ HG+ +VELVAEL+GIQYGRSG TLGVLVPHVGE PVAYR Sbjct 61 LPQLEQPYVFIKRSDAQGTNHGYKVVELVAELDGIQYGRSGTTLGVLVPHVGETPVAYRN 120 Query 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 VLLRKNGNKGAGGHSYG DLKS+DLG ELGTDP ED+++NWNTKH GV REL+RELNGG Sbjct 121 VLLRKNGNKGAGGHSYGIDLKSYDLGVELGTDPIEDYEQNWNTKHGGGVLRELIRELNGG 180 >sp|P0DTC1|R1A_SARS2 Replicase polyprotein 1a OS=Severe acute respiratory syndrome coronavirus 2 OX=2697049 PE=1 SV=1 Length=4405 Score = 361 bits (928), Expect = 7e-115, Method: Composition-based stats. Identities = 180/180 (100%), Positives = 180/180 (100%), Gaps = 0/180 (0%) Query 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV Sbjct 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 Query 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK Sbjct 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 Query 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG Sbjct 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 >sp|P0DTD1|R1AB_SARS2 Replicase polyprotein 1ab OS=Severe acute respiratory syndrome coronavirus 2 OX=2697049 GN=rep PE=1 SV=1 Length=7096 Score = 361 bits (928), Expect = 7e-115, Method: Composition-based stats. Identities = 180/180 (100%), Positives = 180/180 (100%), Gaps = 0/180 (0%) Query 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV Sbjct 1 MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV 60 Query 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK Sbjct 61 LPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRK 120 Query 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG Sbjct 121 VLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGG 180 >sp|P0C6T6|R1A_BCHK9 Replicase polyprotein 1a OS=Bat coronavirus HKU9 OX=694006 GN=1a PE=3 SV=1 Length=4248 Score = 41.9 bits (97), Expect = 0.002, Method: Composition-based stats. Identities = 44/144 (31%), Positives = 63/144 (44%), Gaps = 20/144 (14%) Query 28 VRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV--LPQLEQPYVFIKRSDARTAPHGHV- 84 V G+ +EE L A+Q L+ LV V + P + V I S G Sbjct 29 VTGWDIPIEEALEYAKQQLRTPEPQLVFVPYYLSHAPGISGDRVVITDSIWYATNFGWQP 88 Query 85 MVELVAELEGIQYGRSGETLGVLVPH------VGEIPVAYRKVLLRKNGNKGAGGHSYGA 138 + EL + +G++YGR G T GVL+P +G+I + RK G G +S Sbjct 89 IRELAMDKDGVRYGRGG-THGVLLPMQDPSFIMGDIDIQIRKY--------GIGANSPPD 139 Query 139 DLKSFDLGDELGTD--PYEDFQEN 160 L +D + G D PY DF +N Sbjct 140 VLPLWDGFSDPGPDVGPYLDFPDN 163 >sp|P0C6W5|R1AB_BCHK9 Replicase polyprotein 1ab OS=Bat coronavirus HKU9 OX=694006 GN=rep PE=1 SV=1 Length=6930 Score = 41.9 bits (97), Expect = 0.002, Method: Composition-based stats. Identities = 44/144 (31%), Positives = 63/144 (44%), Gaps = 20/144 (14%) Query 28 VRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGV--LPQLEQPYVFIKRSDARTAPHGHV- 84 V G+ +EE L A+Q L+ LV V + P + V I S G Sbjct 29 VTGWDIPIEEALEYAKQQLRTPEPQLVFVPYYLSHAPGISGDRVVITDSIWYATNFGWQP 88 Query 85 MVELVAELEGIQYGRSGETLGVLVPH------VGEIPVAYRKVLLRKNGNKGAGGHSYGA 138 + EL + +G++YGR G T GVL+P +G+I + RK G G +S Sbjct 89 IRELAMDKDGVRYGRGG-THGVLLPMQDPSFIMGDIDIQIRKY--------GIGANSPPD 139 Query 139 DLKSFDLGDELGTD--PYEDFQEN 160 L +D + G D PY DF +N Sbjct 140 VLPLWDGFSDPGPDVGPYLDFPDN 163 >sp|O60494|CUBN_HUMAN Cubilin OS=Homo sapiens OX=9606 GN=CUBN PE=1 SV=5 Length=3623 Score = 36.9 bits (84), Expect = 0.080, Method: Composition-based stats. Identities = 25/98 (26%), Positives = 39/98 (40%), Gaps = 7/98 (7%) Query 73 RSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRKVLLRKNGNKGAG 132 RSD G +A+ G G+SG V +G + YR L + +G Sbjct 2317 RSDNSPTHVGFKAKYSIAQCGGRVPGQSGV-----VESIGHPTLPYRDNLFCEWHLQGLS 2371 Query 133 GHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVT 170 GH + F+L + G + +DF E W+ S + Sbjct 2372 GHYLTISFEDFNLQNSSGCE--KDFVEIWDNHTSGNIL 2407 >sp|Q9TU53|CUBN_CANLF Cubilin OS=Canis lupus familiaris OX=9615 GN=CUBN PE=1 SV=1 Length=3620 Score = 34.6 bits (78), Expect = 0.56, Method: Composition-based stats. Identities = 26/98 (27%), Positives = 39/98 (40%), Gaps = 8/98 (8%) Query 73 RSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRKVLLRKNGNKGAG 132 RSD + G + +A+ G G+SG + G + YR + KG Sbjct 2314 RSDNSSTQVGFKIKYAIAQCGGRVTGQSGI-----IESSGYPTLPYRDNSFCEWHLKGPS 2368 Query 133 GHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVT 170 GH + F L + G + +DF E W H+SG Sbjct 2369 GHYLTIHFEDFHLQNSSGCE--KDFVEIWEN-HTSGNL 2403 >sp|F1RWC3|CUBN_PIG Cubilin OS=Sus scrofa OX=9823 GN=CUBN PE=1 SV=3 Length=3625 Score = 33.0 bits (74), Expect = 1.4, Method: Composition-based stats. Identities = 25/98 (26%), Positives = 37/98 (38%), Gaps = 8/98 (8%) Query 73 RSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRKVLLRKNGNKGAG 132 RSD G +A+ G G+SG + G + Y L + +G Sbjct 2319 RSDNSPTHAGFKAKYSIAQCGGTVTGQSGV-----IESSGYPALPYANNLFCEWRLQGLS 2373 Query 133 GHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVT 170 GH + F+L + G + DF E W H+SG Sbjct 2374 GHYLTIHFEDFNLQNSSGCE--RDFVEIWEN-HTSGNL 2408 >sp|O07685|BGAM_LACAC Beta-galactosidase small subunit OS=Lactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM) OX=272621 GN=lacM PE=3 SV=1 Length=316 Score = 32.6 bits (73), Expect = 1.8, Method: Composition-based stats. Identities = 18/55 (33%), Positives = 33/55 (60%), Gaps = 8/55 (15%) Query 110 HVGEIPVAYRKVLLRKNGNKGAGG-HSYGADL-KSFDLGDELGTDPYEDFQENWN 162 H+ E+P+A R VL+ +G GG S+GAD+ K + + +P +D++ ++N Sbjct 266 HLEELPLARRTVLVIAGAVRGVGGIDSWGADVEKQYHI------NPEKDYEFSFN 314 >sp|Q8ST44|Y7I5_ENCCU UPF0329 protein ECU07_1850/ECU10_0050 OS=Encephalitozoon cuniculi (strain GB-M1) OX=284813 GN=ECU07_1850 PE=3 SV=1 Length=634 Score = 31.1 bits (69), Expect = 5.7, Method: Composition-based stats. Identities = 22/53 (42%), Positives = 25/53 (47%), Gaps = 11/53 (21%) Query 124 RKNGNKGAGGHSYGADLKSFDLGDELGT---DPYEDFQ--ENWNTKHSSGVTR 171 RK GNKGAG + K D G+E G DP E+ E W K SG R Sbjct 389 RKRGNKGAG------ESKEEDRGEEGGVEAEDPLEEMAVGEAWRKKKGSGEKR 435 >sp|Q8STZ1|YBK9_ENCCU UPF0329 protein ECU11_2090 OS=Encephalitozoon cuniculi (strain GB-M1) OX=284813 GN=ECU11_2090 PE=3 SV=1 Length=634 Score = 31.1 bits (69), Expect = 6.3, Method: Composition-based stats. Identities = 22/53 (42%), Positives = 25/53 (47%), Gaps = 11/53 (21%) Query 124 RKNGNKGAGGHSYGADLKSFDLGDELGT---DPYEDFQ--ENWNTKHSSGVTR 171 RK GNKGAG + K D G+E G DP E+ E W K SG R Sbjct 389 RKRGNKGAG------ESKEEDRGEEGGVEAEDPLEEMAVGEAWRKKKGSGEKR 435 >sp|Q06530|DHSU_ALLVD Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) OX=572477 GN=fccB PE=1 SV=3 Length=431 Score = 30.7 bits (68), Expect = 7.2, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 14/99 (14%) Query 91 ELEGIQYGRSGETL-GVLVPHVGEIPVAYRKVLLRKNGNKGAGGHSYGADLKSFDLGDEL 149 +LE I++G G G+ V H + K L+ K AGG +G D G EL Sbjct 84 KLESIKHGYDGLRAHGIQVVHDSATGIDPDKKLV-----KTAGGAEFGYDRCVVAPGIEL 138 Query 150 GTDPYEDFQEN--------WNTKHSSGVTRELMRELNGG 180 D E + E W + + R+ + ++ G Sbjct 139 IYDKIEGYSEEAAAKLPHAWKAGEQTAILRKQLEDMADG 177 Lambda K H a alpha 0.316 0.136 0.388 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0416 0.140 1.90 42.6 43.6 Effective search space used: 9878801070 Search has CONVERGED! Database: uniprot_sprot.fasta Posted date: Feb 9, 2024 7:20 PM Number of letters in database: 206,533,160 Number of sequences in database: 570,830 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40