PSIBLAST 2.11.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Stephen F.
Altschul, John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005)
"Protein database searches using compositionally adjusted
substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: uniprot_sprot.fasta
571,864 sequences; 207,016,062 total letters
Results from round 1
Query= sp|Q01629|IFM2_HUMAN Interferon-induced transmembrane protein 2
OS=Homo sapiens OX=9606 GN=IFITM2 PE=1 SV=2
Length=132
Score E
Sequences producing significant alignments: (Bits) Value
sp|Q01629|IFM2_HUMAN Interferon-induced transmembrane protein 2 O... 276 2e-96
sp|Q01628|IFM3_HUMAN Interferon-induced transmembrane protein 3 O... 248 2e-85
sp|C9JQL5|DSA2D_HUMAN Putative dispanin subfamily A member 2d OS=... 208 8e-70
sp|Q9CQW9|IFM3_MOUSE Interferon-induced transmembrane protein 3 O... 176 5e-57
sp|P26376|IFM3_RAT Interferon-induced transmembrane protein 3 OS=... 174 2e-56
sp|P13164|IFM1_HUMAN Interferon-induced transmembrane protein 1 O... 171 4e-55
sp|Q99J93|IFM2_MOUSE Interferon-induced transmembrane protein 2 O... 163 8e-52
sp|Q9D103|IFM1_MOUSE Interferon-induced transmembrane protein 1 O... 140 3e-43
sp|Q91499|DSA2B_TORMA Dispanin subfamily A member 2b OS=Torpedo m... 82.4 3e-20
sp|A6NNB3|IFM5_HUMAN Interferon-induced transmembrane protein 5 O... 82.0 9e-20
sp|O88728|IFM5_MOUSE Interferon-induced transmembrane protein 5 O... 77.4 6e-18
sp|A6NMD0|IFM10_HUMAN Interferon-induced transmembrane protein 10... 78.6 2e-17
sp|Q8BR26|IFM10_MOUSE Interferon-induced transmembrane protein 10... 76.3 7e-17
sp|D3ZFB6|PRRT2_RAT Proline-rich transmembrane protein 2 OS=Rattu... 46.6 1e-05
sp|E9PUL5|PRRT2_MOUSE Proline-rich transmembrane protein 2 OS=Mus... 46.2 1e-05
sp|Q5RAC1|PRRT2_PONAB Proline-rich transmembrane protein 2 OS=Pon... 45.8 2e-05
sp|Q7Z6L0|PRRT2_HUMAN Proline-rich transmembrane protein 2 OS=Hom... 45.1 4e-05
sp|A0A1B0GWB2|PRT1B_HUMAN Proline rich transmembrane protein 1B O... 41.6 6e-04
sp|Q6NFU3|TIG_CORDI Trigger factor OS=Corynebacterium diphtheriae... 32.7 0.73
sp|Q6ZNR0|TMM91_HUMAN Transmembrane protein 91 OS=Homo sapiens OX... 31.2 1.8
sp|Q8C581|TMM91_MOUSE Transmembrane protein 91 OS=Mus musculus OX... 30.8 2.4
sp|Q5E9S8|CDIN1_BOVIN CDAN1-interacting nuclease 1 OS=Bos taurus ... 30.4 3.7
sp|Q9H7Z3|NRDE2_HUMAN Nuclear exosome regulator NRDE2 OS=Homo sap... 30.0 6.8
sp|O22920|CHX13_ARATH Cation/H(+) symporter 13 OS=Arabidopsis tha... 30.0 7.2
sp|B1L9M9|ACKA_THESQ Acetate kinase OS=Thermotoga sp. (strain RQ2... 29.6 7.4
sp|A5IKE7|ACKA_THEP1 Acetate kinase OS=Thermotoga petrophila (str... 29.6 7.4
sp|P07102|PPA_ECOLI Phytase AppA OS=Escherichia coli (strain K12)... 29.6 9.7
>sp|Q01629|IFM2_HUMAN Interferon-induced transmembrane protein
2 OS=Homo sapiens OX=9606 GN=IFITM2 PE=1 SV=2
Length=132
Score = 276 bits (705), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 132/132 (100%), Positives = 132/132 (100%), Gaps = 0/132 (0%)
Query 1 MNHIVQTFSPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVWS 60
MNHIVQTFSPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVWS
Sbjct 1 MNHIVQTFSPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVWS 60
Query 61 LFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTILL 120
LFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTILL
Sbjct 61 LFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTILL 120
Query 121 IIIPVLVVQAQR 132
IIIPVLVVQAQR
Sbjct 121 IIIPVLVVQAQR 132
>sp|Q01628|IFM3_HUMAN Interferon-induced transmembrane protein
3 OS=Homo sapiens OX=9606 GN=IFITM3 PE=1 SV=2
Length=133
Score = 248 bits (633), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 120/131 (92%), Positives = 123/131 (94%), Gaps = 1/131 (1%)
Query 1 MNHIVQTF-SPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVW 59
MNH VQTF SPVNSGQPPNYEMLKEE EVA+LG PHNPAPP STVIHIRSETSVPDHVVW
Sbjct 1 MNHTVQTFFSPVNSGQPPNYEMLKEEHEVAVLGAPHNPAPPTSTVIHIRSETSVPDHVVW 60
Query 60 SLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTIL 119
SLFNTLFMN CCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGI MTIL
Sbjct 61 SLFNTLFMNPCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGILMTIL 120
Query 120 LIIIPVLVVQA 130
LI+IPVL+ QA
Sbjct 121 LIVIPVLIFQA 131
>sp|C9JQL5|DSA2D_HUMAN Putative dispanin subfamily A member 2d
OS=Homo sapiens OX=9606 PE=5 SV=1
Length=133
Score = 208 bits (530), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 118/133 (89%), Positives = 123/133 (92%), Gaps = 1/133 (1%)
Query 1 MNHIVQTF-SPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVW 59
MNH VQTF SPVNSGQPPNYEMLKEE +VA+LGVPHNPAPP STVIHIRS+TSVP HVVW
Sbjct 1 MNHTVQTFFSPVNSGQPPNYEMLKEEHKVAVLGVPHNPAPPTSTVIHIRSKTSVPHHVVW 60
Query 60 SLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTIL 119
SLFNTLFMN CCLGFIAFAYSVKSRDRKMVG+VTGAQAYAST KCLNIWALILGI MTIL
Sbjct 61 SLFNTLFMNPCCLGFIAFAYSVKSRDRKMVGNVTGAQAYASTTKCLNIWALILGILMTIL 120
Query 120 LIIIPVLVVQAQR 132
LIIIPVL+ QA R
Sbjct 121 LIIIPVLIFQAHR 133
>sp|Q9CQW9|IFM3_MOUSE Interferon-induced transmembrane protein
3 OS=Mus musculus OX=10090 GN=Ifitm3 PE=1 SV=1
Length=137
Score = 176 bits (447), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 84/117 (72%), Positives = 93/117 (79%), Gaps = 1/117 (1%)
Query 1 MNHIVQTF-SPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVW 59
MNH Q F + + GQPPNYE +KEE EVA +G PH A +TVI++ E SVPDHVVW
Sbjct 1 MNHTSQAFITAASGGQPPNYERIKEEYEVAEMGAPHGSASVRTTVINMPREVSVPDHVVW 60
Query 60 SLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFM 116
SLFNTLFMN CCLGFIA+AYSVKSRDRKMVGDVTGAQAYASTAKCLNI L+L I M
Sbjct 61 SLFNTLFMNFCCLGFIAYAYSVKSRDRKMVGDVTGAQAYASTAKCLNISTLVLSILM 117
>sp|P26376|IFM3_RAT Interferon-induced transmembrane protein 3
OS=Rattus norvegicus OX=10116 GN=ifitm3 PE=2 SV=1
Length=137
Score = 174 bits (442), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 83/117 (71%), Positives = 93/117 (79%), Gaps = 1/117 (1%)
Query 1 MNHIVQTF-SPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVW 59
MNH Q F + GQPPNYE +KEE EV+ LG PH A +TVI++ E SVPDHVVW
Sbjct 1 MNHTSQAFVNAATGGQPPNYERIKEEYEVSELGAPHGSASVRTTVINMPREVSVPDHVVW 60
Query 60 SLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFM 116
SLFNTLFMN CCLGFIA+AYSVKSRDRKMVGD+TGAQAYASTAKCLNI +L+L I M
Sbjct 61 SLFNTLFMNFCCLGFIAYAYSVKSRDRKMVGDMTGAQAYASTAKCLNISSLVLSILM 117
>sp|P13164|IFM1_HUMAN Interferon-induced transmembrane protein
1 OS=Homo sapiens OX=9606 GN=IFITM1 PE=1 SV=3
Length=125
Score = 171 bits (433), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 85/106 (80%), Positives = 91/106 (86%), Gaps = 0/106 (0%)
Query 21 MLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVWSLFNTLFMNTCCLGFIAFAYS 80
M KEE EVA+LG P + P STVI+I SETSVPDHVVWSLFNTLF+N CCLGFIAFAYS
Sbjct 1 MHKEEHEVAVLGPPPSTILPRSTVINIHSETSVPDHVVWSLFNTLFLNWCCLGFIAFAYS 60
Query 81 VKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTILLIIIPVL 126
VKSRDRKMVGDVTGAQAYASTAKCLNIWALILGI MTI I++ V
Sbjct 61 VKSRDRKMVGDVTGAQAYASTAKCLNIWALILGILMTIGFILLLVF 106
>sp|Q99J93|IFM2_MOUSE Interferon-induced transmembrane protein
2 OS=Mus musculus OX=10090 GN=Ifitm2 PE=1 SV=1
Length=144
Score = 163 bits (413), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 78/116 (67%), Positives = 88/116 (76%), Gaps = 0/116 (0%)
Query 1 MNHIVQTFSPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVWS 60
M+H Q F N+G PP+YE +KEE V LG P N A +TVI++ E SVPDHVVWS
Sbjct 1 MSHNSQAFLSTNAGLPPSYETIKEEYGVTELGEPSNSAVVRTTVINMPREVSVPDHVVWS 60
Query 61 LFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFM 116
LFNTLF N CCLGF+A+AYSVKSRDRKMVGDV GAQAYASTAKCLNI +LI I M
Sbjct 61 LFNTLFFNACCLGFVAYAYSVKSRDRKMVGDVVGAQAYASTAKCLNISSLIFSILM 116
>sp|Q9D103|IFM1_MOUSE Interferon-induced transmembrane protein
1 OS=Mus musculus OX=10090 GN=Ifitm1 PE=2 SV=1
Length=106
Score = 140 bits (353), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 67/103 (65%), Positives = 80/103 (78%), Gaps = 1/103 (1%)
Query 21 MLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVWSLFNTLFMNTCCLGFIAFAYS 80
M KE+QEV +LG PH +T I++ E S PDHVVWSLFNTLFMN CCLGF+A+AYS
Sbjct 1 MPKEQQEVVVLGSPHISTSATATTINM-PEISTPDHVVWSLFNTLFMNFCCLGFVAYAYS 59
Query 81 VKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTILLIII 123
VKSRDRKMVGD TGAQA+ASTAKCLNI +L I I++I++
Sbjct 60 VKSRDRKMVGDTTGAQAFASTAKCLNISSLFFTILTAIVVIVV 102
>sp|Q91499|DSA2B_TORMA Dispanin subfamily A member 2b OS=Torpedo
marmorata OX=7788 PE=2 SV=1
Length=107
Score = 82.4 bits (202), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 44/59 (75%), Gaps = 0/59 (0%)
Query 53 VPDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALI 111
+ DH+ WS+FN +MN CCLG A +SVKSRDRK+VGDV GA+ Y STA+ LNI A +
Sbjct 24 IRDHLPWSIFNLFYMNVCCLGLTAMIFSVKSRDRKVVGDVEGARHYGSTARSLNIAATV 82
>sp|A6NNB3|IFM5_HUMAN Interferon-induced transmembrane protein
5 OS=Homo sapiens OX=9606 GN=IFITM5 PE=1 SV=1
Length=132
Score = 82.0 bits (201), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 52/79 (66%), Gaps = 15/79 (19%)
Query 31 LGVPHNPAPPMSTVIHIRSETSVPDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVG 90
LG PH PP DH++WS+F+TL++N CCLGF+A AYS+K+RD+K+VG
Sbjct 26 LGAPH--PPPR-------------DHLIWSVFSTLYLNLCCLGFLALAYSIKARDQKVVG 70
Query 91 DVTGAQAYASTAKCLNIWA 109
D+ A+ + S AKC NI A
Sbjct 71 DLEAARRFGSKAKCYNILA 89
>sp|O88728|IFM5_MOUSE Interferon-induced transmembrane protein
5 OS=Mus musculus OX=10090 GN=Ifitm5 PE=1 SV=1
Length=134
Score = 77.4 bits (189), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 30/57 (53%), Positives = 45/57 (79%), Gaps = 0/57 (0%)
Query 55 DHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALI 111
DH++WS+F+T+++N CCLGF+A +SVK+RD+KM G++ A+ Y S AKC NI A +
Sbjct 37 DHMLWSVFSTMYLNLCCLGFLALVHSVKARDQKMAGNLEAARQYGSKAKCYNILAAM 93
>sp|A6NMD0|IFM10_HUMAN Interferon-induced transmembrane protein
10 OS=Homo sapiens OX=9606 GN=IFITM10 PE=1 SV=1
Length=228
Score = 78.6 bits (192), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/119 (39%), Positives = 70/119 (59%), Gaps = 11/119 (9%)
Query 6 QTFSPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETS-VPDHVVWSLFNT 64
+T S +G PP + L E++ + NP +TVI + +T+ V D+ +WS+FN
Sbjct 112 KTDSVRAAGAPPACKHLAEKKTMT------NP----TTVIEVYPDTTEVNDYYLWSIFNF 161
Query 65 LFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTILLIII 123
+++N CCLGFIA AYS+K RD+K++ D+ GA A TA+ NI + L IL+ I
Sbjct 162 VYLNFCCLGFIALAYSLKVRDKKLLNDLNGAVEDAKTARLFNITSSALAASCIILVFIF 220
>sp|Q8BR26|IFM10_MOUSE Interferon-induced transmembrane protein
10 OS=Mus musculus OX=10090 GN=Ifitm10 PE=2 SV=3
Length=201
Score = 76.3 bits (186), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 66/112 (59%), Gaps = 11/112 (10%)
Query 13 SGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETS-VPDHVVWSLFNTLFMNTCC 71
SG P + L E++ + NP +TVI + +T+ V D+ +WS+FN +++N CC
Sbjct 92 SGVPQACKHLAEKKTMT------NP----TTVIEVYPDTTEVNDYYLWSIFNFVYLNFCC 141
Query 72 LGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTILLIII 123
LGFIA AYS+K RD+K++ D+ GA A TA+ NI + L IL+ I
Sbjct 142 LGFIALAYSLKVRDKKLLNDLNGAVEDAKTARLFNITSSALAASCIILIFIF 193
>sp|D3ZFB6|PRRT2_RAT Proline-rich transmembrane protein 2 OS=Rattus
norvegicus OX=10116 GN=Prrt2 PE=1 SV=1
Length=344
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 14/130 (11%)
Query 7 TFSPVNSGQPPN-YEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVP----------- 54
T +P +G PP + L EE + H +P S H S+ + P
Sbjct 210 TKTPPANGAPPRVLQKLVEEDRIGRAHGGHPGSPRGSLSRHPSSQLAGPGVEGGEGTQKP 269
Query 55 -DHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILG 113
D+++ ++ + F + +AFAY+V SR+ GDV GAQ AK L+I AL+ G
Sbjct 270 RDYIILAIL-SCFCPMWPVNIVAFAYAVMSRNSLQQGDVDGAQRLGRVAKLLSIVALVGG 328
Query 114 IFMTILLIII 123
+ + I +I
Sbjct 329 VLIIIASCVI 338
>sp|E9PUL5|PRRT2_MOUSE Proline-rich transmembrane protein 2 OS=Mus
musculus OX=10090 GN=Prrt2 PE=1 SV=1
Length=346
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 14/130 (11%)
Query 7 TFSPVNSGQPPN-YEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVP----------- 54
T +P +G PP + L EE + H +P S H S+ + P
Sbjct 212 TKTPPANGAPPRVLQKLVEEDRIGRAHGGHPGSPRGSLSRHPSSQLAGPGVEGGEGTQKP 271
Query 55 -DHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILG 113
D+++ ++ + F + +AFAY+V SR+ GDV GAQ AK L+I AL+ G
Sbjct 272 RDYIILAIL-SCFCPMWPVNIVAFAYAVMSRNSLQQGDVDGAQRLGRVAKLLSIVALVGG 330
Query 114 IFMTILLIII 123
+ + I +I
Sbjct 331 VLIIIASCVI 340
>sp|Q5RAC1|PRRT2_PONAB Proline-rich transmembrane protein 2 OS=Pongo
abelii OX=9601 GN=PRRT2 PE=2 SV=1
Length=340
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/128 (30%), Positives = 59/128 (46%), Gaps = 14/128 (11%)
Query 9 SPVNSGQPPN-YEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVP------------D 55
SP +G PP + L EE + H +P S H S+ + P D
Sbjct 208 SPPANGAPPRVLQQLVEEDRMGRAHSGHPGSPRGSLSRHPSSQLAGPGVEGGEGTQKPRD 267
Query 56 HVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIF 115
+++ ++ + F + +AFAY+V SR+ GDV GAQ AK L+I AL+ G+
Sbjct 268 YIILAIL-SCFCPMWPVNIVAFAYAVMSRNSLQQGDVDGAQRLGRVAKLLSIVALVGGVL 326
Query 116 MTILLIII 123
+ I +I
Sbjct 327 IIIASCVI 334
>sp|Q7Z6L0|PRRT2_HUMAN Proline-rich transmembrane protein 2 OS=Homo
sapiens OX=9606 GN=PRRT2 PE=1 SV=1
Length=340
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 0/50 (0%)
Query 74 FIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTILLIII 123
+AFAY+V SR+ GDV GAQ AK L+I AL+ G+ + I +I
Sbjct 285 IVAFAYAVMSRNSLQQGDVDGAQRLGRVAKLLSIVALVGGVLIIIASCVI 334
>sp|A0A1B0GWB2|PRT1B_HUMAN Proline rich transmembrane protein
1B OS=Homo sapiens OX=9606 GN=PRRT1B PE=1 SV=1
Length=263
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/70 (33%), Positives = 41/70 (59%), Gaps = 5/70 (7%)
Query 55 DHVVWSLFNTLFMNTCCL--GFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALIL 112
D+++ S+ TLF CCL G IA YS ++R GD+ A+ + A+ L +++L+
Sbjct 188 DYMMESVLVTLF---CCLLTGLIAIVYSHEARAALGRGDLAQAEEASRKARSLVLFSLLF 244
Query 113 GIFMTILLII 122
G+F++ +I
Sbjct 245 GVFVSTSWVI 254
>sp|Q6NFU3|TIG_CORDI Trigger factor OS=Corynebacterium diphtheriae
(strain ATCC 700971 / NCTC 13129 / Biotype gravis) OX=257309
GN=tig PE=3 SV=1
Length=448
Score = 32.7 bits (73), Expect = 0.73, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 8/53 (15%)
Query 11 VNSGQPPNYEMLKEEQEVAMLGVPH--------NPAPPMSTVIHIRSETSVPD 55
+N P Y+ + EE E+ +LG PH N + + +R E +VPD
Sbjct 68 INDMLPTRYQQVVEENELVVLGQPHIDITKLEDNEVVEFTAEVDVRPEITVPD 120
>sp|Q6ZNR0|TMM91_HUMAN Transmembrane protein 91 OS=Homo sapiens
OX=9606 GN=TMEM91 PE=1 SV=1
Length=172
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/63 (32%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query 55 DHVVWSLFNTLFMNTCCL---GFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALI 111
DH+ ++F+ L CC G AF + K+ GD+ GA A + A L + A+
Sbjct 94 DHLGLAVFSML----CCFWPVGIAAFCLAQKTNKAWAKGDIQGAGAASRRAFLLGVLAVG 149
Query 112 LGI 114
LG+
Sbjct 150 LGV 152
>sp|Q8C581|TMM91_MOUSE Transmembrane protein 91 OS=Mus musculus
OX=10090 GN=Tmem91 PE=2 SV=1
Length=172
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query 55 DHVVWSLFNTLFMNTCCL---GFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALI 111
DH+ ++F+ L CC G AF + K+ GDV GA A + A L + A+
Sbjct 94 DHLGLAVFSVL----CCFWPVGIAAFCLAHKTNKAWAKGDVQGAGAASRRAFLLGVLAVG 149
Query 112 LGI 114
LG+
Sbjct 150 LGL 152
>sp|Q5E9S8|CDIN1_BOVIN CDAN1-interacting nuclease 1 OS=Bos taurus
OX=9913 GN=CDIN1 PE=2 SV=1
Length=281
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (54%), Gaps = 2/41 (5%)
Query 35 HNPAPPMSTVIH--IRSETSVPDHVVWSLFNTLFMNTCCLG 73
H APP +VI+ +R + +PD V+ + +N CC G
Sbjct 111 HEEAPPSKSVINSMLRDPSQIPDGVLANQVYQCIVNDCCYG 151
>sp|Q9H7Z3|NRDE2_HUMAN Nuclear exosome regulator NRDE2 OS=Homo
sapiens OX=9606 GN=NRDE2 PE=1 SV=3
Length=1164
Score = 30.0 bits (66), Expect = 6.8, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query 25 EQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVW-----SLFNTLFMNTCCLG 73
E + LGVP PP S + E S+ D+ ++ + FN LF C+G
Sbjct 638 EAFLQFLGVPSGFTPPASCLYLAMDENSIFDNGLYDEKPLTFFNPLFSGASCVG 691
>sp|O22920|CHX13_ARATH Cation/H(+) symporter 13 OS=Arabidopsis
thaliana OX=3702 GN=CHX13 PE=1 SV=1
Length=831
Score = 30.0 bits (66), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 47/115 (41%), Gaps = 27/115 (23%)
Query 31 LGVPHNPAPPMSTVIHIRSETSVP-DHVVWSLFNTL------FMNTC------CLGFIAF 77
+G+P + S+ I + S TS P V + N L C C F+A
Sbjct 172 MGLPSDVISCTSSAISLSSMTSFPVTTTVLAELNILNSELGRLATHCSMVCEVCSWFVAL 231
Query 78 AYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTILLIIIPVLVVQAQR 132
A+++ +RDR M L ++I+G+ + I + P++V QR
Sbjct 232 AFNLYTRDRTMTS--------------LYALSMIIGLLLVIYFVFRPIIVWLTQR 272
>sp|B1L9M9|ACKA_THESQ Acetate kinase OS=Thermotoga sp. (strain
RQ2) OX=126740 GN=ackA PE=3 SV=1
Length=403
Score = 29.6 bits (65), Expect = 7.4, Method: Composition-based stats.
Identities = 25/72 (35%), Positives = 34/72 (47%), Gaps = 7/72 (10%)
Query 20 EMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVWSLFNTLFMNT----CCLGFI 75
E+LK +EV+ L HNPA M ++ VP+ VV F+T F T L I
Sbjct 107 EVLKAIEEVSPLAPLHNPANLMGIKAAMKLLPGVPNVVV---FDTAFHQTIPQKAYLYAI 163
Query 76 AFAYSVKSRDRK 87
+ Y K R R+
Sbjct 164 PYEYYEKHRIRR 175
>sp|A5IKE7|ACKA_THEP1 Acetate kinase OS=Thermotoga petrophila
(strain ATCC BAA-488 / DSM 13995 / JCM 10881 / RKU-1) OX=390874
GN=ackA PE=3 SV=1
Length=403
Score = 29.6 bits (65), Expect = 7.4, Method: Composition-based stats.
Identities = 25/72 (35%), Positives = 34/72 (47%), Gaps = 7/72 (10%)
Query 20 EMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVWSLFNTLFMNT----CCLGFI 75
E+LK +EV+ L HNPA M ++ VP+ VV F+T F T L I
Sbjct 107 EVLKAIEEVSPLAPLHNPANLMGIKAAMKLLPGVPNVVV---FDTAFHQTIPQKAYLYAI 163
Query 76 AFAYSVKSRDRK 87
+ Y K R R+
Sbjct 164 PYEYYEKHRIRR 175
>sp|P07102|PPA_ECOLI Phytase AppA OS=Escherichia coli (strain
K12) OX=83333 GN=appA PE=1 SV=2
Length=432
Score = 29.6 bits (65), Expect = 9.7, Method: Composition-based stats.
Identities = 21/71 (30%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query 38 APPMSTVIHIRSETSVPDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQ- 96
AP + +H +++TS PD LFN L C L ++ SR + D TG +
Sbjct 127 APDCAITVHTQADTSSPD----PLFNPLKTGVCQLDNANVTDAILSRAGGSIADFTGHRQ 182
Query 97 -AYASTAKCLN 106
A+ + LN
Sbjct 183 TAFRELERVLN 193
Lambda K H a alpha
0.325 0.136 0.417 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 5133095260
Results from round 2
Query= sp|Q01629|IFM2_HUMAN Interferon-induced transmembrane protein 2
OS=Homo sapiens OX=9606 GN=IFITM2 PE=1 SV=2
Length=132
Score E
Sequences producing significant alignments: (Bits) Value
Sequences used in model and found again:
sp|Q01629|IFM2_HUMAN Interferon-induced transmembrane protein 2 O... 209 7e-70
sp|Q01628|IFM3_HUMAN Interferon-induced transmembrane protein 3 O... 205 1e-68
sp|C9JQL5|DSA2D_HUMAN Putative dispanin subfamily A member 2d OS=... 174 3e-56
sp|Q9CQW9|IFM3_MOUSE Interferon-induced transmembrane protein 3 O... 171 5e-55
sp|P26376|IFM3_RAT Interferon-induced transmembrane protein 3 OS=... 169 4e-54
sp|Q99J93|IFM2_MOUSE Interferon-induced transmembrane protein 2 O... 163 7e-52
sp|P13164|IFM1_HUMAN Interferon-induced transmembrane protein 1 O... 158 4e-50
sp|Q9D103|IFM1_MOUSE Interferon-induced transmembrane protein 1 O... 134 1e-40
sp|A6NMD0|IFM10_HUMAN Interferon-induced transmembrane protein 10... 135 1e-39
sp|Q8BR26|IFM10_MOUSE Interferon-induced transmembrane protein 10... 130 5e-38
sp|D3ZFB6|PRRT2_RAT Proline-rich transmembrane protein 2 OS=Rattu... 132 3e-37
sp|E9PUL5|PRRT2_MOUSE Proline-rich transmembrane protein 2 OS=Mus... 132 3e-37
sp|Q5RAC1|PRRT2_PONAB Proline-rich transmembrane protein 2 OS=Pon... 129 5e-36
sp|Q7Z6L0|PRRT2_HUMAN Proline-rich transmembrane protein 2 OS=Hom... 126 6e-35
sp|A6NNB3|IFM5_HUMAN Interferon-induced transmembrane protein 5 O... 100 5e-27
sp|Q91499|DSA2B_TORMA Dispanin subfamily A member 2b OS=Torpedo m... 94.5 7e-25
sp|O88728|IFM5_MOUSE Interferon-induced transmembrane protein 5 O... 94.1 2e-24
sp|A0A1B0GWB2|PRT1B_HUMAN Proline rich transmembrane protein 1B O... 75.2 4e-16
Sequences not found previously or not previously below threshold:
sp|Q6DFT4|TARG1_XENTR Trafficking regulator of GLUT4 1 OS=Xenopus... 59.8 8e-11
sp|D3Z1U7|TM233_MOUSE Transmembrane protein 233 OS=Mus musculus O... 50.9 6e-08
sp|B4DJY2|TM233_HUMAN Transmembrane protein 233 OS=Homo sapiens O... 50.2 1e-07
sp|Q6MG82|PRRT1_RAT Proline-rich transmembrane protein 1 OS=Rattu... 48.2 3e-06
sp|O35449|PRRT1_MOUSE Proline-rich transmembrane protein 1 OS=Mus... 48.2 3e-06
sp|Q99946|PRRT1_HUMAN Proline-rich transmembrane protein 1 OS=Hom... 47.9 4e-06
sp|Q2MHH0|TARG1_RAT Trafficking regulator of GLUT4 1 OS=Rattus no... 43.2 1e-04
sp|Q4R532|SYNG1_MACFA Synapse differentiation-inducing gene prote... 43.6 1e-04
sp|Q9H7V2|SYNG1_HUMAN Synapse differentiation-inducing gene prote... 43.6 1e-04
sp|Q8C581|TMM91_MOUSE Transmembrane protein 91 OS=Mus musculus OX... 43.2 1e-04
sp|Q8C838|TARG1_MOUSE Trafficking regulator of GLUT4 1 OS=Mus mus... 42.9 1e-04
sp|Q58DZ9|SYNG1_RAT Synapse differentiation-inducing gene protein... 42.5 3e-04
sp|A2ANU3|SYNG1_MOUSE Synapse differentiation-inducing gene prote... 42.5 3e-04
sp|Q08DM6|SYNG1_BOVIN Synapse differentiation-inducing gene prote... 42.5 3e-04
sp|Q6ZNR0|TMM91_HUMAN Transmembrane protein 91 OS=Homo sapiens OX... 40.9 7e-04
sp|Q8IXB3|TARG1_HUMAN Trafficking regulator of GLUT4 1 OS=Homo sa... 40.5 0.001
sp|Q6NFU3|TIG_CORDI Trigger factor OS=Corynebacterium diphtheriae... 35.5 0.093
sp|A4IFJ1|SYN1L_BOVIN Synapse differentiation-inducing gene prote... 34.4 0.19
sp|Q3USQ7|SYN1L_MOUSE Synapse differentiation-inducing gene prote... 34.0 0.22
sp|A6NDD5|SYN1L_HUMAN Synapse differentiation-inducing gene prote... 34.0 0.27
sp|Q6CC77|PRP45_YARLI Pre-mRNA-processing protein 45 OS=Yarrowia ... 32.5 1.0
sp|Q5TZE2|SYN1L_DANRE Synapse differentiation-inducing gene prote... 32.1 1.1
sp|Q3U4G0|CDIN1_MOUSE CDAN1-interacting nuclease 1 OS=Mus musculu... 30.1 4.6
>sp|Q01629|IFM2_HUMAN Interferon-induced transmembrane protein
2 OS=Homo sapiens OX=9606 GN=IFITM2 PE=1 SV=2
Length=132
Score = 209 bits (531), Expect = 7e-70, Method: Composition-based stats.
Identities = 132/132 (100%), Positives = 132/132 (100%), Gaps = 0/132 (0%)
Query 1 MNHIVQTFSPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVWS 60
MNHIVQTFSPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVWS
Sbjct 1 MNHIVQTFSPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVWS 60
Query 61 LFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTILL 120
LFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTILL
Sbjct 61 LFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTILL 120
Query 121 IIIPVLVVQAQR 132
IIIPVLVVQAQR
Sbjct 121 IIIPVLVVQAQR 132
>sp|Q01628|IFM3_HUMAN Interferon-induced transmembrane protein
3 OS=Homo sapiens OX=9606 GN=IFITM3 PE=1 SV=2
Length=133
Score = 205 bits (522), Expect = 1e-68, Method: Composition-based stats.
Identities = 120/132 (91%), Positives = 123/132 (93%), Gaps = 1/132 (1%)
Query 1 MNHIVQTF-SPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVW 59
MNH VQTF SPVNSGQPPNYEMLKEE EVA+LG PHNPAPP STVIHIRSETSVPDHVVW
Sbjct 1 MNHTVQTFFSPVNSGQPPNYEMLKEEHEVAVLGAPHNPAPPTSTVIHIRSETSVPDHVVW 60
Query 60 SLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTIL 119
SLFNTLFMN CCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGI MTIL
Sbjct 61 SLFNTLFMNPCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGILMTIL 120
Query 120 LIIIPVLVVQAQ 131
LI+IPVL+ QA
Sbjct 121 LIVIPVLIFQAY 132
>sp|C9JQL5|DSA2D_HUMAN Putative dispanin subfamily A member 2d
OS=Homo sapiens OX=9606 PE=5 SV=1
Length=133
Score = 174 bits (441), Expect = 3e-56, Method: Composition-based stats.
Identities = 118/133 (89%), Positives = 123/133 (92%), Gaps = 1/133 (1%)
Query 1 MNHIVQTF-SPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVW 59
MNH VQTF SPVNSGQPPNYEMLKEE +VA+LGVPHNPAPP STVIHIRS+TSVP HVVW
Sbjct 1 MNHTVQTFFSPVNSGQPPNYEMLKEEHKVAVLGVPHNPAPPTSTVIHIRSKTSVPHHVVW 60
Query 60 SLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTIL 119
SLFNTLFMN CCLGFIAFAYSVKSRDRKMVG+VTGAQAYAST KCLNIWALILGI MTIL
Sbjct 61 SLFNTLFMNPCCLGFIAFAYSVKSRDRKMVGNVTGAQAYASTTKCLNIWALILGILMTIL 120
Query 120 LIIIPVLVVQAQR 132
LIIIPVL+ QA R
Sbjct 121 LIIIPVLIFQAHR 133
>sp|Q9CQW9|IFM3_MOUSE Interferon-induced transmembrane protein
3 OS=Mus musculus OX=10090 GN=Ifitm3 PE=1 SV=1
Length=137
Score = 171 bits (434), Expect = 5e-55, Method: Composition-based stats.
Identities = 84/117 (72%), Positives = 93/117 (79%), Gaps = 1/117 (1%)
Query 1 MNHIVQTF-SPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVW 59
MNH Q F + + GQPPNYE +KEE EVA +G PH A +TVI++ E SVPDHVVW
Sbjct 1 MNHTSQAFITAASGGQPPNYERIKEEYEVAEMGAPHGSASVRTTVINMPREVSVPDHVVW 60
Query 60 SLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFM 116
SLFNTLFMN CCLGFIA+AYSVKSRDRKMVGDVTGAQAYASTAKCLNI L+L I M
Sbjct 61 SLFNTLFMNFCCLGFIAYAYSVKSRDRKMVGDVTGAQAYASTAKCLNISTLVLSILM 117
>sp|P26376|IFM3_RAT Interferon-induced transmembrane protein 3
OS=Rattus norvegicus OX=10116 GN=ifitm3 PE=2 SV=1
Length=137
Score = 169 bits (428), Expect = 4e-54, Method: Composition-based stats.
Identities = 83/117 (71%), Positives = 93/117 (79%), Gaps = 1/117 (1%)
Query 1 MNHIVQTF-SPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVW 59
MNH Q F + GQPPNYE +KEE EV+ LG PH A +TVI++ E SVPDHVVW
Sbjct 1 MNHTSQAFVNAATGGQPPNYERIKEEYEVSELGAPHGSASVRTTVINMPREVSVPDHVVW 60
Query 60 SLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFM 116
SLFNTLFMN CCLGFIA+AYSVKSRDRKMVGD+TGAQAYASTAKCLNI +L+L I M
Sbjct 61 SLFNTLFMNFCCLGFIAYAYSVKSRDRKMVGDMTGAQAYASTAKCLNISSLVLSILM 117
>sp|Q99J93|IFM2_MOUSE Interferon-induced transmembrane protein
2 OS=Mus musculus OX=10090 GN=Ifitm2 PE=1 SV=1
Length=144
Score = 163 bits (413), Expect = 7e-52, Method: Composition-based stats.
Identities = 78/117 (67%), Positives = 88/117 (75%), Gaps = 0/117 (0%)
Query 1 MNHIVQTFSPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVWS 60
M+H Q F N+G PP+YE +KEE V LG P N A +TVI++ E SVPDHVVWS
Sbjct 1 MSHNSQAFLSTNAGLPPSYETIKEEYGVTELGEPSNSAVVRTTVINMPREVSVPDHVVWS 60
Query 61 LFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMT 117
LFNTLF N CCLGF+A+AYSVKSRDRKMVGDV GAQAYASTAKCLNI +LI I M
Sbjct 61 LFNTLFFNACCLGFVAYAYSVKSRDRKMVGDVVGAQAYASTAKCLNISSLIFSILMV 117
>sp|P13164|IFM1_HUMAN Interferon-induced transmembrane protein
1 OS=Homo sapiens OX=9606 GN=IFITM1 PE=1 SV=3
Length=125
Score = 158 bits (400), Expect = 4e-50, Method: Composition-based stats.
Identities = 85/106 (80%), Positives = 91/106 (86%), Gaps = 0/106 (0%)
Query 21 MLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVWSLFNTLFMNTCCLGFIAFAYS 80
M KEE EVA+LG P + P STVI+I SETSVPDHVVWSLFNTLF+N CCLGFIAFAYS
Sbjct 1 MHKEEHEVAVLGPPPSTILPRSTVINIHSETSVPDHVVWSLFNTLFLNWCCLGFIAFAYS 60
Query 81 VKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTILLIIIPVL 126
VKSRDRKMVGDVTGAQAYASTAKCLNIWALILGI MTI I++ V
Sbjct 61 VKSRDRKMVGDVTGAQAYASTAKCLNIWALILGILMTIGFILLLVF 106
>sp|Q9D103|IFM1_MOUSE Interferon-induced transmembrane protein
1 OS=Mus musculus OX=10090 GN=Ifitm1 PE=2 SV=1
Length=106
Score = 134 bits (336), Expect = 1e-40, Method: Composition-based stats.
Identities = 67/103 (65%), Positives = 80/103 (78%), Gaps = 1/103 (1%)
Query 21 MLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVWSLFNTLFMNTCCLGFIAFAYS 80
M KE+QEV +LG PH +T I++ E S PDHVVWSLFNTLFMN CCLGF+A+AYS
Sbjct 1 MPKEQQEVVVLGSPHISTSATATTINM-PEISTPDHVVWSLFNTLFMNFCCLGFVAYAYS 59
Query 81 VKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTILLIII 123
VKSRDRKMVGD TGAQA+ASTAKCLNI +L I I++I++
Sbjct 60 VKSRDRKMVGDTTGAQAFASTAKCLNISSLFFTILTAIVVIVV 102
>sp|A6NMD0|IFM10_HUMAN Interferon-induced transmembrane protein
10 OS=Homo sapiens OX=9606 GN=IFITM10 PE=1 SV=1
Length=228
Score = 135 bits (340), Expect = 1e-39, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 11/124 (9%)
Query 2 NHIVQTFSPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETS-VPDHVVWS 60
+ +T S +G PP + L E++ + NP +TVI + +T+ V D+ +WS
Sbjct 108 SKSSKTDSVRAAGAPPACKHLAEKKTMT------NP----TTVIEVYPDTTEVNDYYLWS 157
Query 61 LFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTILL 120
+FN +++N CCLGFIA AYS+K RD+K++ D+ GA A TA+ NI + L IL+
Sbjct 158 IFNFVYLNFCCLGFIALAYSLKVRDKKLLNDLNGAVEDAKTARLFNITSSALAASCIILV 217
Query 121 IIIP 124
I
Sbjct 218 FIFL 221
>sp|Q8BR26|IFM10_MOUSE Interferon-induced transmembrane protein
10 OS=Mus musculus OX=10090 GN=Ifitm10 PE=2 SV=3
Length=201
Score = 130 bits (327), Expect = 5e-38, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 11/124 (9%)
Query 2 NHIVQTFSPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETS-VPDHVVWS 60
+ +T S SG P + L E++ + NP +TVI + +T+ V D+ +WS
Sbjct 81 SKSSKTDSVRASGVPQACKHLAEKKTMT------NP----TTVIEVYPDTTEVNDYYLWS 130
Query 61 LFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTILL 120
+FN +++N CCLGFIA AYS+K RD+K++ D+ GA A TA+ NI + L IL+
Sbjct 131 IFNFVYLNFCCLGFIALAYSLKVRDKKLLNDLNGAVEDAKTARLFNITSSALAASCIILI 190
Query 121 IIIP 124
I
Sbjct 191 FIFL 194
>sp|D3ZFB6|PRRT2_RAT Proline-rich transmembrane protein 2 OS=Rattus
norvegicus OX=10116 GN=Prrt2 PE=1 SV=1
Length=344
Score = 132 bits (332), Expect = 3e-37, Method: Composition-based stats.
Identities = 39/136 (29%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query 7 TFSPVNSGQPPN-YEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVP----------- 54
T +P +G PP + L EE + H +P S H S+ + P
Sbjct 210 TKTPPANGAPPRVLQKLVEEDRIGRAHGGHPGSPRGSLSRHPSSQLAGPGVEGGEGTQKP 269
Query 55 -DHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILG 113
D+++ ++ + F + +AFAY+V SR+ GDV GAQ AK L+I AL+ G
Sbjct 270 RDYIILAIL-SCFCPMWPVNIVAFAYAVMSRNSLQQGDVDGAQRLGRVAKLLSIVALVGG 328
Query 114 IFMTILLIIIPVLVVQ 129
+ + I +I + V +
Sbjct 329 VLIIIASCVINLGVYK 344
>sp|E9PUL5|PRRT2_MOUSE Proline-rich transmembrane protein 2 OS=Mus
musculus OX=10090 GN=Prrt2 PE=1 SV=1
Length=346
Score = 132 bits (332), Expect = 3e-37, Method: Composition-based stats.
Identities = 39/136 (29%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query 7 TFSPVNSGQPPN-YEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVP----------- 54
T +P +G PP + L EE + H +P S H S+ + P
Sbjct 212 TKTPPANGAPPRVLQKLVEEDRIGRAHGGHPGSPRGSLSRHPSSQLAGPGVEGGEGTQKP 271
Query 55 -DHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILG 113
D+++ ++ + F + +AFAY+V SR+ GDV GAQ AK L+I AL+ G
Sbjct 272 RDYIILAIL-SCFCPMWPVNIVAFAYAVMSRNSLQQGDVDGAQRLGRVAKLLSIVALVGG 330
Query 114 IFMTILLIIIPVLVVQ 129
+ + I +I + V +
Sbjct 331 VLIIIASCVINLGVYK 346
>sp|Q5RAC1|PRRT2_PONAB Proline-rich transmembrane protein 2 OS=Pongo
abelii OX=9601 GN=PRRT2 PE=2 SV=1
Length=340
Score = 129 bits (323), Expect = 5e-36, Method: Composition-based stats.
Identities = 39/135 (29%), Positives = 62/135 (46%), Gaps = 14/135 (10%)
Query 8 FSPVNSGQPPN-YEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVP------------ 54
SP +G PP + L EE + H +P S H S+ + P
Sbjct 207 KSPPANGAPPRVLQQLVEEDRMGRAHSGHPGSPRGSLSRHPSSQLAGPGVEGGEGTQKPR 266
Query 55 DHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGI 114
D+++ ++ + F + +AFAY+V SR+ GDV GAQ AK L+I AL+ G+
Sbjct 267 DYIILAIL-SCFCPMWPVNIVAFAYAVMSRNSLQQGDVDGAQRLGRVAKLLSIVALVGGV 325
Query 115 FMTILLIIIPVLVVQ 129
+ I +I + V +
Sbjct 326 LIIIASCVINLGVYK 340
>sp|Q7Z6L0|PRRT2_HUMAN Proline-rich transmembrane protein 2 OS=Homo
sapiens OX=9606 GN=PRRT2 PE=1 SV=1
Length=340
Score = 126 bits (316), Expect = 6e-35, Method: Composition-based stats.
Identities = 39/135 (29%), Positives = 62/135 (46%), Gaps = 14/135 (10%)
Query 8 FSPVNSGQPPN-YEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVP------------ 54
SP +G PP + L EE + H +P S H S+ + P
Sbjct 207 KSPPANGAPPRVLQQLVEEDRMRRAHSGHPGSPRGSLSRHPSSQLAGPGVEGGEGTQKPR 266
Query 55 DHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGI 114
D+++ ++ + F + +AFAY+V SR+ GDV GAQ AK L+I AL+ G+
Sbjct 267 DYIILAIL-SCFCPMWPVNIVAFAYAVMSRNSLQQGDVDGAQRLGRVAKLLSIVALVGGV 325
Query 115 FMTILLIIIPVLVVQ 129
+ I +I + V +
Sbjct 326 LIIIASCVINLGVYK 340
>sp|A6NNB3|IFM5_HUMAN Interferon-induced transmembrane protein
5 OS=Homo sapiens OX=9606 GN=IFITM5 PE=1 SV=1
Length=132
Score = 100 bits (249), Expect = 5e-27, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 15/86 (17%)
Query 26 QEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRD 85
LG PH P DH++WS+F+TL++N CCLGF+A AYS+K+RD
Sbjct 21 HTALTLGAPHPPP---------------RDHLIWSVFSTLYLNLCCLGFLALAYSIKARD 65
Query 86 RKMVGDVTGAQAYASTAKCLNIWALI 111
+K+VGD+ A+ + S AKC NI A +
Sbjct 66 QKVVGDLEAARRFGSKAKCYNILAAM 91
>sp|Q91499|DSA2B_TORMA Dispanin subfamily A member 2b OS=Torpedo
marmorata OX=7788 PE=2 SV=1
Length=107
Score = 94.5 bits (233), Expect = 7e-25, Method: Composition-based stats.
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query 37 PAPPMSTVIHIRSETSVPDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQ 96
P P S V + DH+ WS+FN +MN CCLG A +SVKSRDRK+VGDV GA+
Sbjct 9 PMSPRS-VQGAPGTLPIRDHLPWSIFNLFYMNVCCLGLTAMIFSVKSRDRKVVGDVEGAR 67
Query 97 AYASTAKCLNIWALI 111
Y STA+ LNI A +
Sbjct 68 HYGSTARSLNIAATV 82
>sp|O88728|IFM5_MOUSE Interferon-induced transmembrane protein
5 OS=Mus musculus OX=10090 GN=Ifitm5 PE=1 SV=1
Length=134
Score = 94.1 bits (232), Expect = 2e-24, Method: Composition-based stats.
Identities = 30/63 (48%), Positives = 46/63 (73%), Gaps = 0/63 (0%)
Query 49 SETSVPDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIW 108
+ DH++WS+F+T+++N CCLGF+A +SVK+RD+KM G++ A+ Y S AKC NI
Sbjct 31 PGPTPRDHMLWSVFSTMYLNLCCLGFLALVHSVKARDQKMAGNLEAARQYGSKAKCYNIL 90
Query 109 ALI 111
A +
Sbjct 91 AAM 93
>sp|A0A1B0GWB2|PRT1B_HUMAN Proline rich transmembrane protein
1B OS=Homo sapiens OX=9606 GN=PRRT1B PE=1 SV=1
Length=263
Score = 75.2 bits (183), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 54/121 (45%), Gaps = 18/121 (15%)
Query 8 FSPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVWSLFNTLFM 67
FSP P + P P +TV H D+++ S+ TLF
Sbjct 154 FSPPAGAAFP----------FPVYNGPMAGVPGPATVEHRPLP---KDYMMESVLVTLF- 199
Query 68 NTCCL--GFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTILLIIIPV 125
CCL G IA YS ++R GD+ A+ + A+ L +++L+ G+F++ +I V
Sbjct 200 --CCLLTGLIAIVYSHEARAALGRGDLAQAEEASRKARSLVLFSLLFGVFVSTSWVIYVV 257
Query 126 L 126
+
Sbjct 258 V 258
>sp|Q6DFT4|TARG1_XENTR Trafficking regulator of GLUT4 1 OS=Xenopus
tropicalis OX=8364 GN=trarg1 PE=2 SV=1
Length=179
Score = 59.8 bits (143), Expect = 8e-11, Method: Composition-based stats.
Identities = 22/92 (24%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query 38 APPMSTVIHIRSETSVPDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQA 97
A ST + + D++V ++F + F + +A +S+ SR+ GD+ GA+
Sbjct 90 ARASSTATTAQEQGRPTDYLVLAIF-SCFCPVWPVNIVALVFSIMSRNSLQQGDLDGARR 148
Query 98 YASTAKCLNIWALILGIFMTILLIIIPVLVVQ 129
A+ L++ +++LG + I+L I+ + +
Sbjct 149 LGRLARLLSVVSILLG-LVIIVLCILSLTIFH 179
>sp|D3Z1U7|TM233_MOUSE Transmembrane protein 233 OS=Mus musculus
OX=10090 GN=Tmem233 PE=1 SV=2
Length=110
Score = 50.9 bits (120), Expect = 6e-08, Method: Composition-based stats.
Identities = 13/60 (22%), Positives = 25/60 (42%), Gaps = 0/60 (0%)
Query 50 ETSVPDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWA 109
+ P + +W + F + +A +S+ S + GD GA+ AK + I +
Sbjct 31 DIPAPSNYLWLTIISCFCPAYPVNIVALVFSIMSLNSYNDGDYEGARRLGRNAKWVAIAS 90
>sp|B4DJY2|TM233_HUMAN Transmembrane protein 233 OS=Homo sapiens
OX=9606 GN=TMEM233 PE=1 SV=1
Length=109
Score = 50.2 bits (118), Expect = 1e-07, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 0/59 (0%)
Query 50 ETSVPDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIW 108
+ +P + +W + F + +A +S+ S + GD GA+ AK + I
Sbjct 30 DVPMPKNYLWLTIVSCFCPAYPINIVALVFSIMSLNSYNDGDYEGARRLGRNAKWVAIA 88
>sp|Q6MG82|PRRT1_RAT Proline-rich transmembrane protein 1 OS=Rattus
norvegicus OX=10116 GN=Prrt1 PE=1 SV=2
Length=306
Score = 48.2 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/76 (24%), Positives = 37/76 (49%), Gaps = 1/76 (1%)
Query 55 DHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGI 114
D++ ++ T+ G IA +V+ R GD+ A+ + A+ + +L +GI
Sbjct 222 DYMPIAVLTTI-CCFWPTGIIAIFKAVQVRTALARGDLVSAEIASREARNFSFISLAVGI 280
Query 115 FMTILLIIIPVLVVQA 130
+L I+ V+++ A
Sbjct 281 AAMVLCTILTVVIIIA 296
>sp|O35449|PRRT1_MOUSE Proline-rich transmembrane protein 1 OS=Mus
musculus OX=10090 GN=Prrt1 PE=1 SV=1
Length=306
Score = 48.2 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/76 (24%), Positives = 37/76 (49%), Gaps = 1/76 (1%)
Query 55 DHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGI 114
D++ ++ T+ G IA +V+ R GD+ A+ + A+ + +L +GI
Sbjct 222 DYMPIAVLTTI-CCFWPTGIIAIFKAVQVRTALARGDLVSAEIASREARNFSFISLAVGI 280
Query 115 FMTILLIIIPVLVVQA 130
+L I+ V+++ A
Sbjct 281 AAMVLCTILTVVIIIA 296
>sp|Q99946|PRRT1_HUMAN Proline-rich transmembrane protein 1 OS=Homo
sapiens OX=9606 GN=PRRT1 PE=1 SV=2
Length=306
Score = 47.9 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/76 (24%), Positives = 37/76 (49%), Gaps = 1/76 (1%)
Query 55 DHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGI 114
D++ ++ T+ G IA +V+ R GD+ A+ + A+ + +L +GI
Sbjct 222 DYMPIAVLTTI-CCFWPTGIIAIFKAVQVRTALARGDMVSAEIASREARNFSFISLAVGI 280
Query 115 FMTILLIIIPVLVVQA 130
+L I+ V+++ A
Sbjct 281 AAMVLCTILTVVIIIA 296
>sp|Q2MHH0|TARG1_RAT Trafficking regulator of GLUT4 1 OS=Rattus
norvegicus OX=10116 GN=Trarg1 PE=1 SV=1
Length=173
Score = 43.2 bits (100), Expect = 1e-04, Method: Composition-based stats.
Identities = 11/51 (22%), Positives = 23/51 (45%), Gaps = 1/51 (2%)
Query 43 TVIHIRSETSVPDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVT 93
T + + + + D++V ++ + F L I +S+ SR GD+
Sbjct 88 TTSYAQDQEAPKDYLVLAI-ASCFCPVWPLNLIPLIFSIMSRSSVQQGDLD 137
>sp|Q4R532|SYNG1_MACFA Synapse differentiation-inducing gene protein
1 OS=Macaca fascicularis OX=9541 GN=SYNDIG1 PE=2 SV=1
Length=258
Score = 43.6 bits (101), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query 54 PDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILG 113
DH+ S+F+ L LG AF S ++ GD+ A + A L + ++ +G
Sbjct 179 RDHLGLSVFSML-CCFWPLGIAAFYLSHETNKAVAKGDLHQASTSSRRALFLAVLSITIG 237
Query 114 IFMTILLIIIPV 125
+ + + + +
Sbjct 238 TGVYVGVAVALI 249
>sp|Q9H7V2|SYNG1_HUMAN Synapse differentiation-inducing gene protein
1 OS=Homo sapiens OX=9606 GN=SYNDIG1 PE=1 SV=1
Length=258
Score = 43.6 bits (101), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query 54 PDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILG 113
DH+ S+F+ L LG AF S ++ GD+ A + A L + ++ +G
Sbjct 179 RDHLGLSVFSML-CCFWPLGIAAFYLSHETNKAVAKGDLHQASTSSRRALFLAVLSITIG 237
Query 114 IFMTILLIIIPV 125
+ + + + +
Sbjct 238 TGVYVGVAVALI 249
>sp|Q8C581|TMM91_MOUSE Transmembrane protein 91 OS=Mus musculus
OX=10090 GN=Tmem91 PE=2 SV=1
Length=172
Score = 43.2 bits (100), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 35/78 (45%), Gaps = 2/78 (3%)
Query 55 DHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGI 114
DH+ ++F+ L +G AF + K+ GDV GA A + A L + A+ LG
Sbjct 94 DHLGLAVFSVL-CCFWPVGIAAFCLAHKTNKAWAKGDVQGAGAASRRAFLLGVLAVGLG- 151
Query 115 FMTILLIIIPVLVVQAQR 132
T ++ + A R
Sbjct 152 LCTYAAALVTLAAYLASR 169
>sp|Q8C838|TARG1_MOUSE Trafficking regulator of GLUT4 1 OS=Mus
musculus OX=10090 GN=Trarg1 PE=1 SV=1
Length=173
Score = 42.9 bits (99), Expect = 1e-04, Method: Composition-based stats.
Identities = 11/51 (22%), Positives = 23/51 (45%), Gaps = 1/51 (2%)
Query 43 TVIHIRSETSVPDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVT 93
T + + + + D++V ++ + F L I +S+ SR GD+
Sbjct 88 TTSYAQDQEAPKDYLVLAI-ASCFCPVWPLNLIPLIFSIMSRSSVQQGDLD 137
>sp|Q58DZ9|SYNG1_RAT Synapse differentiation-inducing gene protein
1 OS=Rattus norvegicus OX=10116 GN=Syndig1 PE=1 SV=1
Length=258
Score = 42.5 bits (98), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query 54 PDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILG 113
DH+ S+F+ L LG AF S ++ GD A + A L + ++ +G
Sbjct 179 RDHLGLSVFSML-CCFWPLGIAAFYLSHETNKAVAKGDFHQASTSSRRALFLAVLSITIG 237
Query 114 IFMTILLIIIPV 125
+ + + + +
Sbjct 238 TGIYVGVAVALI 249
>sp|A2ANU3|SYNG1_MOUSE Synapse differentiation-inducing gene protein
1 OS=Mus musculus OX=10090 GN=Syndig1 PE=1 SV=1
Length=258
Score = 42.5 bits (98), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query 54 PDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILG 113
DH+ S+F+ L LG AF S ++ GD A + A L + ++ +G
Sbjct 179 RDHLGLSVFSML-CCFWPLGIAAFYLSHETNKAVAKGDFHQASTSSRRALFLAVLSITIG 237
Query 114 IFMTILLIIIPV 125
+ + + + +
Sbjct 238 TGIYVGVAVALI 249
>sp|Q08DM6|SYNG1_BOVIN Synapse differentiation-inducing gene protein
1 OS=Bos taurus OX=9913 GN=SYNDIG1 PE=2 SV=1
Length=258
Score = 42.5 bits (98), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query 54 PDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILG 113
DH+ S+F+ L LG AF S ++ GD A + A L + ++ +G
Sbjct 179 RDHLGLSVFSML-CCFWPLGIAAFYLSHETNKAVAKGDFHQASTSSRRALFLAVLSITIG 237
Query 114 IFMTILLIIIPV 125
+ + + + +
Sbjct 238 TGIYVGVAVALI 249
>sp|Q6ZNR0|TMM91_HUMAN Transmembrane protein 91 OS=Homo sapiens
OX=9606 GN=TMEM91 PE=1 SV=1
Length=172
Score = 40.9 bits (94), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/78 (27%), Positives = 36/78 (46%), Gaps = 2/78 (3%)
Query 55 DHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGI 114
DH+ ++F+ L +G AF + K+ GD+ GA A + A L + A+ LG+
Sbjct 94 DHLGLAVFSML-CCFWPVGIAAFCLAQKTNKAWAKGDIQGAGAASRRAFLLGVLAVGLGV 152
Query 115 FMTILLIIIPVLVVQAQR 132
T ++ + A R
Sbjct 153 -CTYAAALVTLAAYLASR 169
>sp|Q8IXB3|TARG1_HUMAN Trafficking regulator of GLUT4 1 OS=Homo
sapiens OX=9606 GN=TRARG1 PE=1 SV=2
Length=177
Score = 40.5 bits (93), Expect = 0.001, Method: Composition-based stats.
Identities = 10/52 (19%), Positives = 22/52 (42%), Gaps = 1/52 (2%)
Query 42 STVIHIRSETSVPDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVT 93
+T + + + + D+++ ++ F L I S+ SR G+V
Sbjct 90 ATTSYAQDQEAPRDYLILAV-VACFCPVWPLNLIPLIISIMSRSSMQQGNVD 140
>sp|Q6NFU3|TIG_CORDI Trigger factor OS=Corynebacterium diphtheriae
(strain ATCC 700971 / NCTC 13129 / Biotype gravis) OX=257309
GN=tig PE=3 SV=1
Length=448
Score = 35.5 bits (80), Expect = 0.093, Method: Composition-based stats.
Identities = 16/60 (27%), Positives = 28/60 (47%), Gaps = 8/60 (13%)
Query 10 PVNSGQPPNYEMLKEEQEVAMLGVPH--------NPAPPMSTVIHIRSETSVPDHVVWSL 61
+N P Y+ + EE E+ +LG PH N + + +R E +VPD +++
Sbjct 67 VINDMLPTRYQQVVEENELVVLGQPHIDITKLEDNEVVEFTAEVDVRPEITVPDFSAFAV 126
>sp|A4IFJ1|SYN1L_BOVIN Synapse differentiation-inducing gene protein
1-like OS=Bos taurus OX=9913 GN=SYNDIG1L PE=2 SV=1
Length=238
Score = 34.4 bits (77), Expect = 0.19, Method: Composition-based stats.
Identities = 15/61 (25%), Positives = 25/61 (41%), Gaps = 1/61 (2%)
Query 54 PDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILG 113
DH+ ++F+ L LG AF +S + GD A + A L ++ +G
Sbjct 159 RDHLGLTIFSML-CCFWPLGIAAFYFSQGTSKAISKGDFRLANTTSRRALFLATLSIAVG 217
Query 114 I 114
Sbjct 218 A 218
>sp|Q3USQ7|SYN1L_MOUSE Synapse differentiation-inducing gene protein
1-like OS=Mus musculus OX=10090 GN=Syndig1l PE=2 SV=1
Length=237
Score = 34.0 bits (76), Expect = 0.22, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 25/61 (41%), Gaps = 1/61 (2%)
Query 54 PDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILG 113
DH+ +LF+ L LG AF +S + GD A + A L ++ +G
Sbjct 158 RDHLGLTLFSML-CCFWPLGIAAFYFSQGTSKAISKGDFRLASTTSRRALFLATLSIAVG 216
Query 114 I 114
Sbjct 217 A 217
>sp|A6NDD5|SYN1L_HUMAN Synapse differentiation-inducing gene protein
1-like OS=Homo sapiens OX=9606 GN=SYNDIG1L PE=3 SV=1
Length=238
Score = 34.0 bits (76), Expect = 0.27, Method: Composition-based stats.
Identities = 17/61 (28%), Positives = 25/61 (41%), Gaps = 1/61 (2%)
Query 54 PDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILG 113
DH+ +LF+ L LG AF +S + GD A + A L A+ +G
Sbjct 159 RDHLGLTLFSML-CCFWPLGIAAFYFSQGTSKAISKGDFRLASTTSRRALFLATLAIAVG 217
Query 114 I 114
Sbjct 218 A 218
>sp|Q6CC77|PRP45_YARLI Pre-mRNA-processing protein 45 OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) OX=284591 GN=PRP45
PE=3 SV=1
Length=568
Score = 32.5 bits (72), Expect = 1.0, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 8/99 (8%)
Query 8 FSPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVWSLFNTLFM 67
P + +PP ++ K +PP + + + D W++ +T+
Sbjct 192 DLPQDPLEPPKFKHTK--------VPGRPASPPAPILRSPPRKLTAQDQKDWAIPSTVSN 243
Query 68 NTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLN 106
GF + D + + DV + +A ++ LN
Sbjct 244 WKNQKGFTISLDKRMAADGRGLEDVKVNENFAKFSEVLN 282
>sp|Q5TZE2|SYN1L_DANRE Synapse differentiation-inducing gene protein
1-like OS=Danio rerio OX=7955 GN=syndig1l PE=3 SV=1
Length=258
Score = 32.1 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 14/57 (25%), Positives = 23/57 (40%), Gaps = 1/57 (2%)
Query 54 PDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWAL 110
DH+ ++F+ L LG AF +S + GD A + A L ++
Sbjct 179 RDHLGLAIFSML-CCFWPLGIAAFYFSQGTSKAVTKGDFPLASIASRRALFLAALSI 234
>sp|Q3U4G0|CDIN1_MOUSE CDAN1-interacting nuclease 1 OS=Mus musculus
OX=10090 GN=Cdin1 PE=2 SV=2
Length=281
Score = 30.1 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 19/83 (23%), Positives = 34/83 (41%), Gaps = 10/83 (12%)
Query 34 PHNPAPPMSTVIH--IRSETSVPDHVVWSLFNTLFMNTCCLG--------FIAFAYSVKS 83
H PP +VI+ +R + +PD V+ + +N CC G I + + V
Sbjct 110 GHEQTPPSKSVINSMLRDPSQIPDGVLANQVYQCIVNDCCYGPLVDCIKHAIGYEHEVLL 169
Query 84 RDRKMVGDVTGAQAYASTAKCLN 106
RD + +++ AK +
Sbjct 170 RDLLLKKNLSFLDEDQLRAKGYD 192
Lambda K H a alpha
0.317 0.126 0.326 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0385 0.140 1.90 42.6 43.6
Effective search space used: 5133095260
Database: uniprot_sprot.fasta
Posted date: Aug 1, 2024 3:29 PM
Number of letters in database: 207,016,062
Number of sequences in database: 571,864
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40