PSIBLAST 2.11.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Stephen F.
Altschul, John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005)
"Protein database searches using compositionally adjusted
substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: uniprot_sprot.fasta
           570,830 sequences; 206,533,160 total letters

Results from round 1


Query= sp|P0DTC8|NS8_SARS2 ORF8 protein OS=Severe acute respiratory
syndrome coronavirus 2 OX=2697049 GN=8 PE=1 SV=1

Length=121
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

sp|P0DTC8|NS8_SARS2 ORF8 protein OS=Severe acute respiratory synd...  251     3e-87
sp|Q3LZX5|NS8_BCHK3 Non-structural protein 8 OS=Bat coronavirus H...  160     5e-51
sp|Q0Q469|NS8_BC279 Non-structural protein 8 OS=Bat coronavirus 2...  160     7e-51
sp|Q3I5I8|NS8_BCRP3 Non-structural protein 8 OS=Bat coronavirus R...  159     9e-51
sp|Q80H93|NS8B_SARS ORF8b protein OS=Severe acute respiratory syn...  33.5    0.094
sp|P11067|NIFB_AZOVI FeMo cofactor biosynthesis protein NifB OS=A...  33.5    0.37 
sp|Q6AIT8|AROD_DESPS 3-dehydroquinate dehydratase OS=Desulfotalea...  33.1    0.41 
sp|Q65525|VP4_ROTBS Outer capsid protein VP4 OS=Rotavirus C (isol...  31.6    1.7  
sp|Q8WHX1|TI214_PSINU Protein TIC 214 OS=Psilotum nudum OX=3240 G...  30.4    3.8  
sp|P24427|NIFB_RHILT FeMo cofactor biosynthesis protein NifB OS=R...  30.4    4.3  
sp|Q7TFA0|NS8A_SARS ORF8a protein OS=Severe acute respiratory syn...  27.7    5.2  
sp|A1UU52|TRUB_BARBK tRNA pseudouridine synthase B OS=Bartonella ...  29.3    8.0  
sp|P26193|VP4_ROTPC Outer capsid protein VP4 OS=Rotavirus C (stra...  29.3    9.2  


>sp|P0DTC8|NS8_SARS2 ORF8 protein OS=Severe acute respiratory 
syndrome coronavirus 2 OX=2697049 GN=8 PE=1 SV=1
Length=121

 Score = 251 bits (642),  Expect = 3e-87, Method: Compositional matrix adjust.
 Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)

Query  1    MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL  60
            MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL
Sbjct  1    MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL  60

Query  61   CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF  120
            CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF
Sbjct  61   CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF  120

Query  121  I  121
            I
Sbjct  121  I  121


>sp|Q3LZX5|NS8_BCHK3 Non-structural protein 8 OS=Bat coronavirus 
HKU3 OX=442736 GN=8 PE=3 SV=1
Length=121

 Score = 160 bits (405),  Expect = 5e-51, Method: Compositional matrix adjust.
 Identities = 69/121 (57%), Positives = 94/121 (78%), Gaps = 0/121 (0%)

Query  1    MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL  60
            MK L+  G++ +V  FH+ECS+Q C ++QPY ++DPCPIH+YS W+I++G+RKSA L++L
Sbjct  1    MKLLIVFGLLASVYCFHRECSIQECCENQPYQIEDPCPIHYYSDWFIKIGSRKSARLVQL  60

Query  61   CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF  120
            C  + G + PI Y   GNYT+SC P  INCQ P +GSL+VRCS+  DF+E+HDVRVVLDF
Sbjct  61   CEGDYGRRIPIHYEMFGNYTISCEPLEINCQAPPVGSLIVRCSYDYDFVEHHDVRVVLDF  120

Query  121  I  121
            I
Sbjct  121  I  121


>sp|Q0Q469|NS8_BC279 Non-structural protein 8 OS=Bat coronavirus 
279/2005 OX=389167 GN=8 PE=3 SV=1
Length=121

 Score = 160 bits (404),  Expect = 7e-51, Method: Compositional matrix adjust.
 Identities = 69/121 (57%), Positives = 94/121 (78%), Gaps = 0/121 (0%)

Query  1    MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL  60
            MK L+  G++T+V   H+ECS+Q C ++QPY ++DPCPIH+YS W+I++G+RKSA L++L
Sbjct  1    MKLLIVFGLLTSVYCIHKECSIQECCENQPYQIEDPCPIHYYSDWFIKIGSRKSARLVQL  60

Query  61   CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF  120
            C  + G + PI Y   GNYT+SC P  INCQ P +GSL+VRCS+  DF+E+HDVRVVLDF
Sbjct  61   CEGDYGKRIPIHYEMFGNYTISCEPLEINCQAPPVGSLIVRCSYDYDFVEHHDVRVVLDF  120

Query  121  I  121
            I
Sbjct  121  I  121


>sp|Q3I5I8|NS8_BCRP3 Non-structural protein 8 OS=Bat coronavirus 
Rp3/2004 OX=349344 GN=8 PE=3 SV=1
Length=121

 Score = 159 bits (403),  Expect = 9e-51, Method: Compositional matrix adjust.
 Identities = 68/121 (56%), Positives = 94/121 (78%), Gaps = 0/121 (0%)

Query  1    MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL  60
            MK L+  G++T+V   H+ECS+Q C ++QPY ++DPCPIH+YS W+I++G+RKSA L++L
Sbjct  1    MKLLIVFGLLTSVYCIHKECSIQECCENQPYQIEDPCPIHYYSDWFIKIGSRKSARLVQL  60

Query  61   CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF  120
            C  + G + PI Y   GNYT+SC P  INCQ P +GSL+VRCS+  DF+E+HDVRVVLDF
Sbjct  61   CEGDYGKRIPIHYQMFGNYTISCEPLEINCQAPPVGSLIVRCSYDYDFVEHHDVRVVLDF  120

Query  121  I  121
            +
Sbjct  121  V  121


>sp|Q80H93|NS8B_SARS ORF8b protein OS=Severe acute respiratory 
syndrome coronavirus OX=694009 GN=8b PE=1 SV=1
Length=84

 Score = 33.5 bits (75),  Expect = 0.094, Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 26/42 (62%), Gaps = 4/42 (10%)

Query  82   SCLP-FTINCQEPKLGSLVVRCSFYEDFLE---YHDVRVVLD  119
            +C P  TINCQ+P  G+L+ RC +  +  +   + DV VVL+
Sbjct  39   TCTPNVTINCQDPAGGALIARCWYLHEGHQTAAFRDVLVVLN  80


>sp|P11067|NIFB_AZOVI FeMo cofactor biosynthesis protein NifB 
OS=Azotobacter vinelandii OX=354 GN=nifB PE=3 SV=1
Length=502

 Score = 33.5 bits (75),  Expect = 0.37, Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 30/58 (52%), Gaps = 5/58 (9%)

Query  53   KSAPLIELCVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLE  110
            + AP ++LCV   G   P    ++  + +  +  TINC +P++G+ +     Y D LE
Sbjct  139  EQAPDMKLCVSTNGLALPECVEELAKHNIDHVTITINCVDPEIGAKI-----YPDLLE  191


>sp|Q6AIT8|AROD_DESPS 3-dehydroquinate dehydratase OS=Desulfotalea 
psychrophila (strain LSv54 / DSM 12343) OX=177439 GN=aroD 
PE=3 SV=1
Length=226

 Score = 33.1 bits (74),  Expect = 0.41, Method: Compositional matrix adjust.
 Identities = 14/33 (42%), Positives = 19/33 (58%), Gaps = 0/33 (0%)

Query  51   ARKSAPLIELCVDEAGSKSPIQYIDIGNYTVSC  83
            A+K  PLI  C+ EAG+ S +   D+G Y   C
Sbjct  168  AKKGLPLIAFCMGEAGAVSRVASCDLGGYMTYC  200


>sp|Q65525|VP4_ROTBS Outer capsid protein VP4 OS=Rotavirus C (isolate 
RVC/Cow/Japan/Shintoku/1991/G2P[3]) OX=33723 PE=3 SV=1
Length=733

 Score = 31.6 bits (70),  Expect = 1.7, Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 20/29 (69%), Gaps = 0/29 (0%)

Query  59  ELCVDEAGSKSPIQYIDIGNYTVSCLPFT  87
           E+ +D+  +K+ + Y+D GNYT + LP T
Sbjct  20  EILLDQQTNKTTVDYVDAGNYTYAQLPPT  48


>sp|Q8WHX1|TI214_PSINU Protein TIC 214 OS=Psilotum nudum OX=3240 
GN=TIC214 PE=3 SV=1
Length=1703

 Score = 30.4 bits (67),  Expect = 3.8, Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 23/35 (66%), Gaps = 0/35 (0%)

Query  41    FYSKWYIRVGARKSAPLIELCVDEAGSKSPIQYID  75
             FY+  Y  + + K++ +I+L + + G + PIQYI+
Sbjct  1308  FYNLLYSFIDSTKASNIIKLPIQQKGKEDPIQYIN  1342


>sp|P24427|NIFB_RHILT FeMo cofactor biosynthesis protein NifB 
OS=Rhizobium leguminosarum bv. trifolii OX=386 GN=nifB PE=3 
SV=2
Length=490

 Score = 30.4 bits (67),  Expect = 4.3, Method: Composition-based stats.
 Identities = 14/54 (26%), Positives = 27/54 (50%), Gaps = 0/54 (0%)

Query  53   KSAPLIELCVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYE  106
            +  P ++LC+   G   P    D+ +  V  +  TIN  +P++G+ +    FY+
Sbjct  146  REIPDVKLCISTNGLALPEHVDDLVDMNVGHVTITINMVDPRIGTKIYPWIFYD  199


>sp|Q7TFA0|NS8A_SARS ORF8a protein OS=Severe acute respiratory 
syndrome coronavirus OX=694009 GN=8a PE=3 SV=1
Length=39

 Score = 27.7 bits (60),  Expect = 5.2, Method: Compositional matrix adjust.
 Identities = 13/41 (32%), Positives = 24/41 (59%), Gaps = 4/41 (10%)

Query  1   MKFLVFLGIITTVAAFHQECSL-QSCTQHQPYVVDDPCPIH  40
           MK L+ L  I+  +     C++ Q C  ++P+V++DPC + 
Sbjct  1   MKLLIVLTCISLCSCI---CTVVQRCASNKPHVLEDPCKVQ  38


>sp|A1UU52|TRUB_BARBK tRNA pseudouridine synthase B OS=Bartonella 
bacilliformis (strain ATCC 35685 / KC583 / Herrer 020/F12,63) 
OX=360095 GN=truB PE=3 SV=1
Length=320

 Score = 29.3 bits (64),  Expect = 8.0, Method: Compositional matrix adjust.
 Identities = 18/65 (28%), Positives = 29/65 (45%), Gaps = 4/65 (6%)

Query  8    GIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIELCVDEAGS  67
            G +  +A+     +L   T+  PYV++     HF+  W    G  +S   +E  V +  S
Sbjct  46   GTLDPLASGLLPIALGEATKTVPYVMEGTKTYHFHVAW----GEERSTDDLEGVVTKTSS  101

Query  68   KSPIQ  72
            K P Q
Sbjct  102  KRPTQ  106


>sp|P26193|VP4_ROTPC Outer capsid protein VP4 OS=Rotavirus C (strain 
RVC/Pig/United States/Cowden/1980) OX=10916 PE=3 SV=1
Length=736

 Score = 29.3 bits (64),  Expect = 9.2, Method: Composition-based stats.
 Identities = 11/29 (38%), Positives = 19/29 (66%), Gaps = 0/29 (0%)

Query  59  ELCVDEAGSKSPIQYIDIGNYTVSCLPFT  87
           E+  D+  +++ + Y+D GNYT + LP T
Sbjct  20  EILTDQQTTETVVDYVDAGNYTYAQLPPT  48



Lambda      K        H        a         alpha
   0.328    0.143    0.463    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 5157903960
Results from round 2


Query= sp|P0DTC8|NS8_SARS2 ORF8 protein OS=Severe acute respiratory
syndrome coronavirus 2 OX=2697049 GN=8 PE=1 SV=1

Length=121
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value
Sequences used in model and found again:

sp|Q3LZX5|NS8_BCHK3 Non-structural protein 8 OS=Bat coronavirus H...  209     1e-70
sp|P0DTC8|NS8_SARS2 ORF8 protein OS=Severe acute respiratory synd...  208     6e-70
sp|Q0Q469|NS8_BC279 Non-structural protein 8 OS=Bat coronavirus 2...  206     4e-69
sp|Q3I5I8|NS8_BCRP3 Non-structural protein 8 OS=Bat coronavirus R...  204     1e-68

Sequences not found previously or not previously below threshold:

sp|Q80H93|NS8B_SARS ORF8b protein OS=Severe acute respiratory syn...  31.8    0.41 
sp|P11067|NIFB_AZOVI FeMo cofactor biosynthesis protein NifB OS=A...  31.0    2.6  
sp|Q7TFA0|NS8A_SARS ORF8a protein OS=Severe acute respiratory syn...  28.0    4.5  
sp|Q8XHB2|CARA_CLOPE Carbamoyl phosphate synthase small chain OS=...  29.9    5.1  
sp|Q61129|CFAI_MOUSE Complement factor I OS=Mus musculus OX=10090...  29.9    5.1  
sp|Q6AIT8|AROD_DESPS 3-dehydroquinate dehydratase OS=Desulfotalea...  29.9    5.4  


>sp|Q3LZX5|NS8_BCHK3 Non-structural protein 8 OS=Bat coronavirus 
HKU3 OX=442736 GN=8 PE=3 SV=1
Length=121

 Score = 209 bits (533),  Expect = 1e-70, Method: Composition-based stats.
 Identities = 69/121 (57%), Positives = 94/121 (78%), Gaps = 0/121 (0%)

Query  1    MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL  60
            MK L+  G++ +V  FH+ECS+Q C ++QPY ++DPCPIH+YS W+I++G+RKSA L++L
Sbjct  1    MKLLIVFGLLASVYCFHRECSIQECCENQPYQIEDPCPIHYYSDWFIKIGSRKSARLVQL  60

Query  61   CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF  120
            C  + G + PI Y   GNYT+SC P  INCQ P +GSL+VRCS+  DF+E+HDVRVVLDF
Sbjct  61   CEGDYGRRIPIHYEMFGNYTISCEPLEINCQAPPVGSLIVRCSYDYDFVEHHDVRVVLDF  120

Query  121  I  121
            I
Sbjct  121  I  121


>sp|P0DTC8|NS8_SARS2 ORF8 protein OS=Severe acute respiratory 
syndrome coronavirus 2 OX=2697049 GN=8 PE=1 SV=1
Length=121

 Score = 208 bits (529),  Expect = 6e-70, Method: Composition-based stats.
 Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)

Query  1    MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL  60
            MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL
Sbjct  1    MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL  60

Query  61   CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF  120
            CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF
Sbjct  61   CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF  120

Query  121  I  121
            I
Sbjct  121  I  121


>sp|Q0Q469|NS8_BC279 Non-structural protein 8 OS=Bat coronavirus 
279/2005 OX=389167 GN=8 PE=3 SV=1
Length=121

 Score = 206 bits (524),  Expect = 4e-69, Method: Composition-based stats.
 Identities = 69/121 (57%), Positives = 94/121 (78%), Gaps = 0/121 (0%)

Query  1    MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL  60
            MK L+  G++T+V   H+ECS+Q C ++QPY ++DPCPIH+YS W+I++G+RKSA L++L
Sbjct  1    MKLLIVFGLLTSVYCIHKECSIQECCENQPYQIEDPCPIHYYSDWFIKIGSRKSARLVQL  60

Query  61   CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF  120
            C  + G + PI Y   GNYT+SC P  INCQ P +GSL+VRCS+  DF+E+HDVRVVLDF
Sbjct  61   CEGDYGKRIPIHYEMFGNYTISCEPLEINCQAPPVGSLIVRCSYDYDFVEHHDVRVVLDF  120

Query  121  I  121
            I
Sbjct  121  I  121


>sp|Q3I5I8|NS8_BCRP3 Non-structural protein 8 OS=Bat coronavirus 
Rp3/2004 OX=349344 GN=8 PE=3 SV=1
Length=121

 Score = 204 bits (520),  Expect = 1e-68, Method: Composition-based stats.
 Identities = 68/121 (56%), Positives = 94/121 (78%), Gaps = 0/121 (0%)

Query  1    MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL  60
            MK L+  G++T+V   H+ECS+Q C ++QPY ++DPCPIH+YS W+I++G+RKSA L++L
Sbjct  1    MKLLIVFGLLTSVYCIHKECSIQECCENQPYQIEDPCPIHYYSDWFIKIGSRKSARLVQL  60

Query  61   CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF  120
            C  + G + PI Y   GNYT+SC P  INCQ P +GSL+VRCS+  DF+E+HDVRVVLDF
Sbjct  61   CEGDYGKRIPIHYQMFGNYTISCEPLEINCQAPPVGSLIVRCSYDYDFVEHHDVRVVLDF  120

Query  121  I  121
            +
Sbjct  121  V  121


>sp|Q80H93|NS8B_SARS ORF8b protein OS=Severe acute respiratory 
syndrome coronavirus OX=694009 GN=8b PE=1 SV=1
Length=84

 Score = 31.8 bits (71),  Expect = 0.41, Method: Composition-based stats.
 Identities = 17/42 (40%), Positives = 25/42 (60%), Gaps = 4/42 (10%)

Query  82   SCLP-FTINCQEPKLGSLVVRCSFYED---FLEYHDVRVVLD  119
            +C P  TINCQ+P  G+L+ RC +  +      + DV VVL+
Sbjct  39   TCTPNVTINCQDPAGGALIARCWYLHEGHQTAAFRDVLVVLN  80


>sp|P11067|NIFB_AZOVI FeMo cofactor biosynthesis protein NifB 
OS=Azotobacter vinelandii OX=354 GN=nifB PE=3 SV=1
Length=502

 Score = 31.0 bits (69),  Expect = 2.6, Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 5/60 (8%)

Query  53   KSAPLIELCVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYH  112
            + AP ++LCV   G   P    ++  + +  +  TINC +P++G+ +     Y D LE  
Sbjct  139  EQAPDMKLCVSTNGLALPECVEELAKHNIDHVTITINCVDPEIGAKI-----YPDLLEQQ  193


>sp|Q7TFA0|NS8A_SARS ORF8a protein OS=Severe acute respiratory 
syndrome coronavirus OX=694009 GN=8a PE=3 SV=1
Length=39

 Score = 28.0 bits (61),  Expect = 4.5, Method: Composition-based stats.
 Identities = 13/42 (31%), Positives = 24/42 (57%), Gaps = 4/42 (10%)

Query  1   MKFLVFLGIITTVAAFHQECSL-QSCTQHQPYVVDDPCPIHF  41
           MK L+ L  I+  +     C++ Q C  ++P+V++DPC +  
Sbjct  1   MKLLIVLTCISLCSCI---CTVVQRCASNKPHVLEDPCKVQH  39


>sp|Q8XHB2|CARA_CLOPE Carbamoyl phosphate synthase small chain 
OS=Clostridium perfringens (strain 13 / Type A) OX=195102 GN=carA 
PE=3 SV=1
Length=349

 Score = 29.9 bits (66),  Expect = 5.1, Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 21/46 (46%), Gaps = 4/46 (9%)

Query  65   AGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVR--CSFYEDF  108
             G    + Y  IGNY ++        +EPK+   +VR  C +  +F
Sbjct  47   YGQIVTMTYPLIGNYGINLEDLE--SKEPKVRGFIVREKCQYPNNF  90


>sp|Q61129|CFAI_MOUSE Complement factor I OS=Mus musculus OX=10090 
GN=Cfi PE=1 SV=3
Length=603

 Score = 29.9 bits (66),  Expect = 5.1, Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 6/77 (8%)

Query  38   PIHFYSKWYIRVGARKSAPLIELCVDEAGSKSPIQYIDIGN--YTVSCLPFTINCQEPKL  95
            P  +Y K     G R  +  I+ C  ++G   P+   DI N  Y    + +  NC +P+ 
Sbjct  520  PDRYYEKEMQCAGTRDGS--IDACKGDSGG--PLVCEDINNVTYVWGIVSWGENCGKPEF  575

Query  96   GSLVVRCSFYEDFLEYH  112
              +  R + Y D++ YH
Sbjct  576  PGVYTRVANYFDWISYH  592


>sp|Q6AIT8|AROD_DESPS 3-dehydroquinate dehydratase OS=Desulfotalea 
psychrophila (strain LSv54 / DSM 12343) OX=177439 GN=aroD 
PE=3 SV=1
Length=226

 Score = 29.9 bits (66),  Expect = 5.4, Method: Composition-based stats.
 Identities = 14/37 (38%), Positives = 20/37 (54%), Gaps = 0/37 (0%)

Query  47   IRVGARKSAPLIELCVDEAGSKSPIQYIDIGNYTVSC  83
            +   A+K  PLI  C+ EAG+ S +   D+G Y   C
Sbjct  164  LEYAAKKGLPLIAFCMGEAGAVSRVASCDLGGYMTYC  200



Lambda      K        H        a         alpha
   0.317    0.144    0.486    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0442    0.140     1.90     42.6     43.6 

Effective search space used: 5157903960

Search has CONVERGED!


  Database: uniprot_sprot.fasta
    Posted date:  Feb 9, 2024  7:20 PM
  Number of letters in database: 206,533,160
  Number of sequences in database:  570,830



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40