PSIBLAST 2.11.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Stephen F. Altschul, John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: uniprot_sprot.fasta 570,830 sequences; 206,533,160 total letters Results from round 1 Query= sp|P0DTC8|NS8_SARS2 ORF8 protein OS=Severe acute respiratory syndrome coronavirus 2 OX=2697049 GN=8 PE=1 SV=1 Length=121 Score E Sequences producing significant alignments: (Bits) Value sp|P0DTC8|NS8_SARS2 ORF8 protein OS=Severe acute respiratory synd... 251 3e-87 sp|Q3LZX5|NS8_BCHK3 Non-structural protein 8 OS=Bat coronavirus H... 160 5e-51 sp|Q0Q469|NS8_BC279 Non-structural protein 8 OS=Bat coronavirus 2... 160 7e-51 sp|Q3I5I8|NS8_BCRP3 Non-structural protein 8 OS=Bat coronavirus R... 159 9e-51 sp|Q80H93|NS8B_SARS ORF8b protein OS=Severe acute respiratory syn... 33.5 0.094 sp|P11067|NIFB_AZOVI FeMo cofactor biosynthesis protein NifB OS=A... 33.5 0.37 sp|Q6AIT8|AROD_DESPS 3-dehydroquinate dehydratase OS=Desulfotalea... 33.1 0.41 sp|Q65525|VP4_ROTBS Outer capsid protein VP4 OS=Rotavirus C (isol... 31.6 1.7 sp|Q8WHX1|TI214_PSINU Protein TIC 214 OS=Psilotum nudum OX=3240 G... 30.4 3.8 sp|P24427|NIFB_RHILT FeMo cofactor biosynthesis protein NifB OS=R... 30.4 4.3 sp|Q7TFA0|NS8A_SARS ORF8a protein OS=Severe acute respiratory syn... 27.7 5.2 sp|A1UU52|TRUB_BARBK tRNA pseudouridine synthase B OS=Bartonella ... 29.3 8.0 sp|P26193|VP4_ROTPC Outer capsid protein VP4 OS=Rotavirus C (stra... 29.3 9.2 >sp|P0DTC8|NS8_SARS2 ORF8 protein OS=Severe acute respiratory syndrome coronavirus 2 OX=2697049 GN=8 PE=1 SV=1 Length=121 Score = 251 bits (642), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 1 MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL 60 MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL Sbjct 1 MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL 60 Query 61 CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF 120 CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF Sbjct 61 CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF 120 Query 121 I 121 I Sbjct 121 I 121 >sp|Q3LZX5|NS8_BCHK3 Non-structural protein 8 OS=Bat coronavirus HKU3 OX=442736 GN=8 PE=3 SV=1 Length=121 Score = 160 bits (405), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 69/121 (57%), Positives = 94/121 (78%), Gaps = 0/121 (0%) Query 1 MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL 60 MK L+ G++ +V FH+ECS+Q C ++QPY ++DPCPIH+YS W+I++G+RKSA L++L Sbjct 1 MKLLIVFGLLASVYCFHRECSIQECCENQPYQIEDPCPIHYYSDWFIKIGSRKSARLVQL 60 Query 61 CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF 120 C + G + PI Y GNYT+SC P INCQ P +GSL+VRCS+ DF+E+HDVRVVLDF Sbjct 61 CEGDYGRRIPIHYEMFGNYTISCEPLEINCQAPPVGSLIVRCSYDYDFVEHHDVRVVLDF 120 Query 121 I 121 I Sbjct 121 I 121 >sp|Q0Q469|NS8_BC279 Non-structural protein 8 OS=Bat coronavirus 279/2005 OX=389167 GN=8 PE=3 SV=1 Length=121 Score = 160 bits (404), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 69/121 (57%), Positives = 94/121 (78%), Gaps = 0/121 (0%) Query 1 MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL 60 MK L+ G++T+V H+ECS+Q C ++QPY ++DPCPIH+YS W+I++G+RKSA L++L Sbjct 1 MKLLIVFGLLTSVYCIHKECSIQECCENQPYQIEDPCPIHYYSDWFIKIGSRKSARLVQL 60 Query 61 CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF 120 C + G + PI Y GNYT+SC P INCQ P +GSL+VRCS+ DF+E+HDVRVVLDF Sbjct 61 CEGDYGKRIPIHYEMFGNYTISCEPLEINCQAPPVGSLIVRCSYDYDFVEHHDVRVVLDF 120 Query 121 I 121 I Sbjct 121 I 121 >sp|Q3I5I8|NS8_BCRP3 Non-structural protein 8 OS=Bat coronavirus Rp3/2004 OX=349344 GN=8 PE=3 SV=1 Length=121 Score = 159 bits (403), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 68/121 (56%), Positives = 94/121 (78%), Gaps = 0/121 (0%) Query 1 MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL 60 MK L+ G++T+V H+ECS+Q C ++QPY ++DPCPIH+YS W+I++G+RKSA L++L Sbjct 1 MKLLIVFGLLTSVYCIHKECSIQECCENQPYQIEDPCPIHYYSDWFIKIGSRKSARLVQL 60 Query 61 CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF 120 C + G + PI Y GNYT+SC P INCQ P +GSL+VRCS+ DF+E+HDVRVVLDF Sbjct 61 CEGDYGKRIPIHYQMFGNYTISCEPLEINCQAPPVGSLIVRCSYDYDFVEHHDVRVVLDF 120 Query 121 I 121 + Sbjct 121 V 121 >sp|Q80H93|NS8B_SARS ORF8b protein OS=Severe acute respiratory syndrome coronavirus OX=694009 GN=8b PE=1 SV=1 Length=84 Score = 33.5 bits (75), Expect = 0.094, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 26/42 (62%), Gaps = 4/42 (10%) Query 82 SCLP-FTINCQEPKLGSLVVRCSFYEDFLE---YHDVRVVLD 119 +C P TINCQ+P G+L+ RC + + + + DV VVL+ Sbjct 39 TCTPNVTINCQDPAGGALIARCWYLHEGHQTAAFRDVLVVLN 80 >sp|P11067|NIFB_AZOVI FeMo cofactor biosynthesis protein NifB OS=Azotobacter vinelandii OX=354 GN=nifB PE=3 SV=1 Length=502 Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 30/58 (52%), Gaps = 5/58 (9%) Query 53 KSAPLIELCVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLE 110 + AP ++LCV G P ++ + + + TINC +P++G+ + Y D LE Sbjct 139 EQAPDMKLCVSTNGLALPECVEELAKHNIDHVTITINCVDPEIGAKI-----YPDLLE 191 >sp|Q6AIT8|AROD_DESPS 3-dehydroquinate dehydratase OS=Desulfotalea psychrophila (strain LSv54 / DSM 12343) OX=177439 GN=aroD PE=3 SV=1 Length=226 Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust. Identities = 14/33 (42%), Positives = 19/33 (58%), Gaps = 0/33 (0%) Query 51 ARKSAPLIELCVDEAGSKSPIQYIDIGNYTVSC 83 A+K PLI C+ EAG+ S + D+G Y C Sbjct 168 AKKGLPLIAFCMGEAGAVSRVASCDLGGYMTYC 200 >sp|Q65525|VP4_ROTBS Outer capsid protein VP4 OS=Rotavirus C (isolate RVC/Cow/Japan/Shintoku/1991/G2P[3]) OX=33723 PE=3 SV=1 Length=733 Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 20/29 (69%), Gaps = 0/29 (0%) Query 59 ELCVDEAGSKSPIQYIDIGNYTVSCLPFT 87 E+ +D+ +K+ + Y+D GNYT + LP T Sbjct 20 EILLDQQTNKTTVDYVDAGNYTYAQLPPT 48 >sp|Q8WHX1|TI214_PSINU Protein TIC 214 OS=Psilotum nudum OX=3240 GN=TIC214 PE=3 SV=1 Length=1703 Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 23/35 (66%), Gaps = 0/35 (0%) Query 41 FYSKWYIRVGARKSAPLIELCVDEAGSKSPIQYID 75 FY+ Y + + K++ +I+L + + G + PIQYI+ Sbjct 1308 FYNLLYSFIDSTKASNIIKLPIQQKGKEDPIQYIN 1342 >sp|P24427|NIFB_RHILT FeMo cofactor biosynthesis protein NifB OS=Rhizobium leguminosarum bv. trifolii OX=386 GN=nifB PE=3 SV=2 Length=490 Score = 30.4 bits (67), Expect = 4.3, Method: Composition-based stats. Identities = 14/54 (26%), Positives = 27/54 (50%), Gaps = 0/54 (0%) Query 53 KSAPLIELCVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYE 106 + P ++LC+ G P D+ + V + TIN +P++G+ + FY+ Sbjct 146 REIPDVKLCISTNGLALPEHVDDLVDMNVGHVTITINMVDPRIGTKIYPWIFYD 199 >sp|Q7TFA0|NS8A_SARS ORF8a protein OS=Severe acute respiratory syndrome coronavirus OX=694009 GN=8a PE=3 SV=1 Length=39 Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust. Identities = 13/41 (32%), Positives = 24/41 (59%), Gaps = 4/41 (10%) Query 1 MKFLVFLGIITTVAAFHQECSL-QSCTQHQPYVVDDPCPIH 40 MK L+ L I+ + C++ Q C ++P+V++DPC + Sbjct 1 MKLLIVLTCISLCSCI---CTVVQRCASNKPHVLEDPCKVQ 38 >sp|A1UU52|TRUB_BARBK tRNA pseudouridine synthase B OS=Bartonella bacilliformis (strain ATCC 35685 / KC583 / Herrer 020/F12,63) OX=360095 GN=truB PE=3 SV=1 Length=320 Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust. Identities = 18/65 (28%), Positives = 29/65 (45%), Gaps = 4/65 (6%) Query 8 GIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIELCVDEAGS 67 G + +A+ +L T+ PYV++ HF+ W G +S +E V + S Sbjct 46 GTLDPLASGLLPIALGEATKTVPYVMEGTKTYHFHVAW----GEERSTDDLEGVVTKTSS 101 Query 68 KSPIQ 72 K P Q Sbjct 102 KRPTQ 106 >sp|P26193|VP4_ROTPC Outer capsid protein VP4 OS=Rotavirus C (strain RVC/Pig/United States/Cowden/1980) OX=10916 PE=3 SV=1 Length=736 Score = 29.3 bits (64), Expect = 9.2, Method: Composition-based stats. Identities = 11/29 (38%), Positives = 19/29 (66%), Gaps = 0/29 (0%) Query 59 ELCVDEAGSKSPIQYIDIGNYTVSCLPFT 87 E+ D+ +++ + Y+D GNYT + LP T Sbjct 20 EILTDQQTTETVVDYVDAGNYTYAQLPPT 48 Lambda K H a alpha 0.328 0.143 0.463 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 5157903960 Results from round 2 Query= sp|P0DTC8|NS8_SARS2 ORF8 protein OS=Severe acute respiratory syndrome coronavirus 2 OX=2697049 GN=8 PE=1 SV=1 Length=121 Score E Sequences producing significant alignments: (Bits) Value Sequences used in model and found again: sp|Q3LZX5|NS8_BCHK3 Non-structural protein 8 OS=Bat coronavirus H... 209 1e-70 sp|P0DTC8|NS8_SARS2 ORF8 protein OS=Severe acute respiratory synd... 208 6e-70 sp|Q0Q469|NS8_BC279 Non-structural protein 8 OS=Bat coronavirus 2... 206 4e-69 sp|Q3I5I8|NS8_BCRP3 Non-structural protein 8 OS=Bat coronavirus R... 204 1e-68 Sequences not found previously or not previously below threshold: sp|Q80H93|NS8B_SARS ORF8b protein OS=Severe acute respiratory syn... 31.8 0.41 sp|P11067|NIFB_AZOVI FeMo cofactor biosynthesis protein NifB OS=A... 31.0 2.6 sp|Q7TFA0|NS8A_SARS ORF8a protein OS=Severe acute respiratory syn... 28.0 4.5 sp|Q8XHB2|CARA_CLOPE Carbamoyl phosphate synthase small chain OS=... 29.9 5.1 sp|Q61129|CFAI_MOUSE Complement factor I OS=Mus musculus OX=10090... 29.9 5.1 sp|Q6AIT8|AROD_DESPS 3-dehydroquinate dehydratase OS=Desulfotalea... 29.9 5.4 >sp|Q3LZX5|NS8_BCHK3 Non-structural protein 8 OS=Bat coronavirus HKU3 OX=442736 GN=8 PE=3 SV=1 Length=121 Score = 209 bits (533), Expect = 1e-70, Method: Composition-based stats. Identities = 69/121 (57%), Positives = 94/121 (78%), Gaps = 0/121 (0%) Query 1 MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL 60 MK L+ G++ +V FH+ECS+Q C ++QPY ++DPCPIH+YS W+I++G+RKSA L++L Sbjct 1 MKLLIVFGLLASVYCFHRECSIQECCENQPYQIEDPCPIHYYSDWFIKIGSRKSARLVQL 60 Query 61 CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF 120 C + G + PI Y GNYT+SC P INCQ P +GSL+VRCS+ DF+E+HDVRVVLDF Sbjct 61 CEGDYGRRIPIHYEMFGNYTISCEPLEINCQAPPVGSLIVRCSYDYDFVEHHDVRVVLDF 120 Query 121 I 121 I Sbjct 121 I 121 >sp|P0DTC8|NS8_SARS2 ORF8 protein OS=Severe acute respiratory syndrome coronavirus 2 OX=2697049 GN=8 PE=1 SV=1 Length=121 Score = 208 bits (529), Expect = 6e-70, Method: Composition-based stats. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 1 MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL 60 MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL Sbjct 1 MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL 60 Query 61 CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF 120 CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF Sbjct 61 CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF 120 Query 121 I 121 I Sbjct 121 I 121 >sp|Q0Q469|NS8_BC279 Non-structural protein 8 OS=Bat coronavirus 279/2005 OX=389167 GN=8 PE=3 SV=1 Length=121 Score = 206 bits (524), Expect = 4e-69, Method: Composition-based stats. Identities = 69/121 (57%), Positives = 94/121 (78%), Gaps = 0/121 (0%) Query 1 MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL 60 MK L+ G++T+V H+ECS+Q C ++QPY ++DPCPIH+YS W+I++G+RKSA L++L Sbjct 1 MKLLIVFGLLTSVYCIHKECSIQECCENQPYQIEDPCPIHYYSDWFIKIGSRKSARLVQL 60 Query 61 CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF 120 C + G + PI Y GNYT+SC P INCQ P +GSL+VRCS+ DF+E+HDVRVVLDF Sbjct 61 CEGDYGKRIPIHYEMFGNYTISCEPLEINCQAPPVGSLIVRCSYDYDFVEHHDVRVVLDF 120 Query 121 I 121 I Sbjct 121 I 121 >sp|Q3I5I8|NS8_BCRP3 Non-structural protein 8 OS=Bat coronavirus Rp3/2004 OX=349344 GN=8 PE=3 SV=1 Length=121 Score = 204 bits (520), Expect = 1e-68, Method: Composition-based stats. Identities = 68/121 (56%), Positives = 94/121 (78%), Gaps = 0/121 (0%) Query 1 MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIRVGARKSAPLIEL 60 MK L+ G++T+V H+ECS+Q C ++QPY ++DPCPIH+YS W+I++G+RKSA L++L Sbjct 1 MKLLIVFGLLTSVYCIHKECSIQECCENQPYQIEDPCPIHYYSDWFIKIGSRKSARLVQL 60 Query 61 CVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDF 120 C + G + PI Y GNYT+SC P INCQ P +GSL+VRCS+ DF+E+HDVRVVLDF Sbjct 61 CEGDYGKRIPIHYQMFGNYTISCEPLEINCQAPPVGSLIVRCSYDYDFVEHHDVRVVLDF 120 Query 121 I 121 + Sbjct 121 V 121 >sp|Q80H93|NS8B_SARS ORF8b protein OS=Severe acute respiratory syndrome coronavirus OX=694009 GN=8b PE=1 SV=1 Length=84 Score = 31.8 bits (71), Expect = 0.41, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 25/42 (60%), Gaps = 4/42 (10%) Query 82 SCLP-FTINCQEPKLGSLVVRCSFYED---FLEYHDVRVVLD 119 +C P TINCQ+P G+L+ RC + + + DV VVL+ Sbjct 39 TCTPNVTINCQDPAGGALIARCWYLHEGHQTAAFRDVLVVLN 80 >sp|P11067|NIFB_AZOVI FeMo cofactor biosynthesis protein NifB OS=Azotobacter vinelandii OX=354 GN=nifB PE=3 SV=1 Length=502 Score = 31.0 bits (69), Expect = 2.6, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query 53 KSAPLIELCVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYH 112 + AP ++LCV G P ++ + + + TINC +P++G+ + Y D LE Sbjct 139 EQAPDMKLCVSTNGLALPECVEELAKHNIDHVTITINCVDPEIGAKI-----YPDLLEQQ 193 >sp|Q7TFA0|NS8A_SARS ORF8a protein OS=Severe acute respiratory syndrome coronavirus OX=694009 GN=8a PE=3 SV=1 Length=39 Score = 28.0 bits (61), Expect = 4.5, Method: Composition-based stats. Identities = 13/42 (31%), Positives = 24/42 (57%), Gaps = 4/42 (10%) Query 1 MKFLVFLGIITTVAAFHQECSL-QSCTQHQPYVVDDPCPIHF 41 MK L+ L I+ + C++ Q C ++P+V++DPC + Sbjct 1 MKLLIVLTCISLCSCI---CTVVQRCASNKPHVLEDPCKVQH 39 >sp|Q8XHB2|CARA_CLOPE Carbamoyl phosphate synthase small chain OS=Clostridium perfringens (strain 13 / Type A) OX=195102 GN=carA PE=3 SV=1 Length=349 Score = 29.9 bits (66), Expect = 5.1, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 21/46 (46%), Gaps = 4/46 (9%) Query 65 AGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVR--CSFYEDF 108 G + Y IGNY ++ +EPK+ +VR C + +F Sbjct 47 YGQIVTMTYPLIGNYGINLEDLE--SKEPKVRGFIVREKCQYPNNF 90 >sp|Q61129|CFAI_MOUSE Complement factor I OS=Mus musculus OX=10090 GN=Cfi PE=1 SV=3 Length=603 Score = 29.9 bits (66), Expect = 5.1, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 6/77 (8%) Query 38 PIHFYSKWYIRVGARKSAPLIELCVDEAGSKSPIQYIDIGN--YTVSCLPFTINCQEPKL 95 P +Y K G R + I+ C ++G P+ DI N Y + + NC +P+ Sbjct 520 PDRYYEKEMQCAGTRDGS--IDACKGDSGG--PLVCEDINNVTYVWGIVSWGENCGKPEF 575 Query 96 GSLVVRCSFYEDFLEYH 112 + R + Y D++ YH Sbjct 576 PGVYTRVANYFDWISYH 592 >sp|Q6AIT8|AROD_DESPS 3-dehydroquinate dehydratase OS=Desulfotalea psychrophila (strain LSv54 / DSM 12343) OX=177439 GN=aroD PE=3 SV=1 Length=226 Score = 29.9 bits (66), Expect = 5.4, Method: Composition-based stats. Identities = 14/37 (38%), Positives = 20/37 (54%), Gaps = 0/37 (0%) Query 47 IRVGARKSAPLIELCVDEAGSKSPIQYIDIGNYTVSC 83 + A+K PLI C+ EAG+ S + D+G Y C Sbjct 164 LEYAAKKGLPLIAFCMGEAGAVSRVASCDLGGYMTYC 200 Lambda K H a alpha 0.317 0.144 0.486 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0442 0.140 1.90 42.6 43.6 Effective search space used: 5157903960 Search has CONVERGED! Database: uniprot_sprot.fasta Posted date: Feb 9, 2024 7:20 PM Number of letters in database: 206,533,160 Number of sequences in database: 570,830 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40