PSIBLAST 2.11.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Stephen F.
Altschul, John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005)
"Protein database searches using compositionally adjusted
substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: uniprot_sprot.fasta
572,214 sequences; 207,235,166 total letters
Results from round 1
Query= sp|O00327|BMAL1_HUMAN Basic helix-loop-helix ARNT-like protein 1
OS=Homo sapiens OX=9606 GN=BMAL1 PE=1 SV=2
Length=626
Score E
Sequences producing significant alignments: (Bits) Value
sp|O00327|BMAL1_HUMAN Basic helix-loop-helix ARNT-like protein 1 ... 1299 0.0
sp|Q5R4T2|BMAL1_PONAB Basic helix-loop-helix ARNT-like protein 1 ... 1289 0.0
sp|O88529|BMAL1_MESAU Basic helix-loop-helix ARNT-like protein 1 ... 1288 0.0
sp|A0MLS5|BMAL1_HORSE Basic helix-loop-helix ARNT-like protein 1 ... 1286 0.0
sp|Q91YA9|BMAL1_NANGA Basic helix-loop-helix ARNT-like protein 1 ... 1279 0.0
sp|Q9EPW1|BMAL1_RAT Basic helix-loop-helix ARNT-like protein 1 OS... 1278 0.0
sp|Q9WTL8|BMAL1_MOUSE Basic helix-loop-helix ARNT-like protein 1 ... 1267 0.0
sp|Q6YGZ5|BMAL1_TYTAL Basic helix-loop-helix ARNT-like protein 1 ... 1205 0.0
sp|Q9I8T7|BMAL1_CHICK Basic helix-loop-helix ARNT-like protein 1 ... 1195 0.0
sp|Q8QGQ7|BMAL2_CHICK Basic helix-loop-helix ARNT-like protein 2 ... 654 0.0
sp|Q8WYA1|BMAL2_HUMAN Basic helix-loop-helix ARNT-like protein 2 ... 577 0.0
sp|Q2VPD4|BMAL2_MOUSE Basic helix-loop-helix ARNT-like protein 2 ... 487 3e-165
sp|O61734|CYCL_DROME Protein cycle OS=Drosophila melanogaster OX=... 424 5e-143
sp|O15945|ARNT_DROME Aryl hydrocarbon receptor nuclear translocat... 339 8e-107
sp|Q9BE97|ARNT_BOVIN Aryl hydrocarbon receptor nuclear translocat... 341 5e-106
sp|P27540|ARNT_HUMAN Aryl hydrocarbon receptor nuclear translocat... 341 6e-106
sp|P53762|ARNT_MOUSE Aryl hydrocarbon receptor nuclear translocat... 340 2e-105
sp|O02748|ARNT_RABIT Aryl hydrocarbon receptor nuclear translocat... 339 2e-105
sp|Q9DG12|ARNT2_DANRE Aryl hydrocarbon receptor nuclear transloca... 338 3e-105
sp|Q9HBZ2|ARNT2_HUMAN Aryl hydrocarbon receptor nuclear transloca... 333 1e-103
sp|Q78E60|ARNT2_RAT Aryl hydrocarbon receptor nuclear translocato... 331 4e-103
sp|P41739|ARNT_RAT Aryl hydrocarbon receptor nuclear translocator... 333 4e-103
sp|Q61324|ARNT2_MOUSE Aryl hydrocarbon receptor nuclear transloca... 331 4e-103
sp|P79832|ARNT_ONCMY Aryl hydrocarbon receptor nuclear translocat... 330 1e-102
sp|O02219|AHA1_CAEEL Aryl hydrocarbon receptor nuclear translocat... 221 4e-64
sp|O08785|CLOCK_MOUSE Circadian locomoter output cycles protein k... 168 1e-42
sp|Q5RAK8|CLOCK_PONAB Circadian locomoter output cycles protein k... 167 2e-42
sp|O15516|CLOCK_HUMAN Circadian locomoter output cycles protein k... 167 2e-42
sp|Q91YB0|CLOCK_NANGA Circadian locomoter output cycles protein k... 165 1e-41
sp|Q91YB2|CLOCK_SPACA Circadian locomoter output cycles protein k... 164 2e-41
sp|Q9WVS9|CLOCK_RAT Circadian locomoter output cycles protein kap... 164 3e-41
sp|Q99743|NPAS2_HUMAN Neuronal PAS domain-containing protein 2 OS... 163 5e-41
sp|P97460|NPAS2_MOUSE Neuronal PAS domain-containing protein 2 OS... 160 3e-40
sp|Q91YA8|CLOCK_SPAJD Circadian locomoter output cycles protein k... 160 4e-40
sp|Q6YGZ4|CLOCK_TYTAL Circadian locomoter output cycles protein k... 159 1e-39
sp|Q8QGQ6|CLOCK_CHICK Circadian locomoter output cycles protein k... 159 1e-39
sp|Q5ZQU2|NPAS2_CHICK Neuronal PAS domain-containing protein 2 OS... 155 2e-38
sp|Q9YIB9|HIF1A_CHICK Hypoxia-inducible factor 1-alpha OS=Gallus ... 152 1e-37
sp|O61735|CLOCK_DROME Circadian locomoter output cycles protein k... 149 4e-36
sp|Q0PGG7|HIF1A_BOSMU Hypoxia-inducible factor 1-alpha OS=Bos mut... 146 2e-35
sp|Q9XTA5|HIF1A_BOVIN Hypoxia-inducible factor 1-alpha OS=Bos tau... 145 3e-35
sp|Q309Z6|HIF1A_EOSFB Hypoxia-inducible factor 1-alpha OS=Eospala... 145 5e-35
sp|Q16665|HIF1A_HUMAN Hypoxia-inducible factor 1-alpha OS=Homo sa... 144 6e-35
sp|Q61221|HIF1A_MOUSE Hypoxia-inducible factor 1-alpha OS=Mus mus... 144 9e-35
sp|Q99814|EPAS1_HUMAN Endothelial PAS domain-containing protein 1... 144 9e-35
sp|O35800|HIF1A_RAT Hypoxia-inducible factor 1-alpha OS=Rattus no... 144 9e-35
sp|P97481|EPAS1_MOUSE Endothelial PAS domain-containing protein 1... 140 1e-33
sp|Q9JHS1|EPAS1_RAT Endothelial PAS domain-containing protein 1 O... 140 2e-33
sp|A1YFY6|SIM1_PANPA Single-minded homolog 1 OS=Pan paniscus OX=9... 139 4e-33
sp|P05709|SIM_DROME Protein single-minded OS=Drosophila melanogas... 137 8e-33
sp|Q61045|SIM1_MOUSE Single-minded homolog 1 OS=Mus musculus OX=1... 137 1e-32
sp|P81133|SIM1_HUMAN Single-minded homolog 1 OS=Homo sapiens OX=9... 137 1e-32
sp|A2T6X9|SIM1_PANTR Single-minded homolog 1 OS=Pan troglodytes O... 137 1e-32
sp|Q14190|SIM2_HUMAN Single-minded homolog 2 OS=Homo sapiens OX=9... 133 3e-31
sp|Q98SJ5|SIM1A_DANRE Single-minded homolog 1-A OS=Danio rerio OX... 132 5e-31
sp|Q61079|SIM2_MOUSE Single-minded homolog 2 OS=Mus musculus OX=1... 129 5e-30
sp|Q98SW2|HIF1A_ONCMY Hypoxia-inducible factor 1-alpha OS=Oncorhy... 128 1e-29
sp|Q9QZQ0|NPAS3_MOUSE Neuronal PAS domain-containing protein 3 OS... 120 6e-27
sp|Q9Y2N7|HIF3A_HUMAN Hypoxia-inducible factor 3-alpha OS=Homo sa... 116 7e-26
sp|Q0VBL6|HIF3A_MOUSE Hypoxia-inducible factor 3-alpha OS=Mus mus... 115 2e-25
sp|Q8IXF0|NPAS3_HUMAN Neuronal PAS domain-containing protein 3 OS... 114 3e-25
sp|Q9I8A9|HIF1A_XENLA Hypoxia-inducible factor 1-alpha OS=Xenopus... 114 3e-25
sp|P97459|NPAS1_MOUSE Neuronal PAS domain-containing protein 1 OS... 112 8e-25
sp|Q9JHS2|HIF3A_RAT Hypoxia-inducible factor 3-alpha OS=Rattus no... 112 2e-24
sp|Q99742|NPAS1_HUMAN Neuronal PAS domain-containing protein 1 OS... 108 2e-23
sp|Q24767|PER_DROYA Period circadian protein OS=Drosophila yakuba... 107 1e-22
sp|P07663|PER_DROME Period circadian protein OS=Drosophila melano... 106 1e-22
sp|P12348|PER_DROPS Period circadian protein OS=Drosophila pseudo... 105 3e-22
sp|Q03297|PER_DROWI Period circadian protein (Fragment) OS=Drosop... 105 4e-22
sp|Q03355|PER_DROSI Period circadian protein (Fragments) OS=Droso... 104 5e-22
sp|Q03353|PER_DROMA Period circadian protein (Fragments) OS=Droso... 104 5e-22
sp|Q03354|PER_DROSE Period circadian protein (Fragments) OS=Droso... 103 6e-22
sp|Q8R4S6|AHR_MUSMC Aryl hydrocarbon receptor OS=Mus musculus cas... 101 7e-21
sp|P30561|AHR_MOUSE Aryl hydrocarbon receptor OS=Mus musculus OX=... 100 8e-21
sp|P12349|PER_DROVI Period circadian protein OS=Drosophila virili... 100 1e-20
sp|Q8R4S5|AHR_MUSMM Aryl hydrocarbon receptor OS=Mus musculus mol... 100 1e-20
sp|Q24167|SIMA_DROME Protein similar OS=Drosophila melanogaster O... 100 2e-20
sp|Q25637|PER_PERAM Period circadian protein OS=Periplaneta ameri... 99.8 2e-20
sp|P41738|AHR_RAT Aryl hydrocarbon receptor OS=Rattus norvegicus ... 99.4 3e-20
sp|O02747|AHR_RABIT Aryl hydrocarbon receptor OS=Oryctolagus cuni... 99.4 3e-20
sp|Q8R4S4|AHR_MUSSI Aryl hydrocarbon receptor OS=Mus spicilegus O... 98.6 5e-20
sp|Q8R4S7|AHR_MUSCR Aryl hydrocarbon receptor OS=Mus caroli OX=10... 98.2 6e-20
sp|P35869|AHR_HUMAN Aryl hydrocarbon receptor OS=Homo sapiens OX=... 97.4 9e-20
sp|O70361|PER3_MOUSE Period circadian protein homolog 3 OS=Mus mu... 97.4 1e-19
sp|Q95LD9|AHR_DELLE Aryl hydrocarbon receptor OS=Delphinapterus l... 96.7 2e-19
sp|Q8R4S2|AHR_MUSSP Aryl hydrocarbon receptor OS=Mus spretus OX=1... 96.7 2e-19
sp|P56645|PER3_HUMAN Period circadian protein homolog 3 OS=Homo s... 96.3 3e-19
sp|Q9Y6Q9|NCOA3_HUMAN Nuclear receptor coactivator 3 OS=Homo sapi... 96.3 3e-19
sp|O54943|PER2_MOUSE Period circadian protein homolog 2 OS=Mus mu... 95.5 5e-19
sp|Q17062|PER_ANTPE Period circadian protein OS=Antheraea pernyi ... 94.7 8e-19
sp|Q8K3T2|PER2_SPAJD Period circadian protein homolog 2 OS=Spalax... 94.7 9e-19
sp|Q8CJE2|PER3_RAT Period circadian protein homolog 3 OS=Rattus n... 93.6 2e-18
sp|O15055|PER2_HUMAN Period circadian protein homolog 2 OS=Homo s... 93.6 2e-18
sp|Q24119|TRH_DROME Protein trachealess OS=Drosophila melanogaste... 93.2 2e-18
sp|Q4PJW2|NCOA1_PIG Nuclear receptor coactivator 1 OS=Sus scrofa ... 92.4 5e-18
sp|Q15788|NCOA1_HUMAN Nuclear receptor coactivator 1 OS=Homo sapi... 91.7 8e-18
sp|Q9Z301|PER2_RAT Period circadian protein homolog 2 OS=Rattus n... 90.5 2e-17
sp|B5DE09|NCOA2_XENTR Nuclear receptor coactivator 2 OS=Xenopus t... 90.5 2e-17
sp|P70365|NCOA1_MOUSE Nuclear receptor coactivator 1 OS=Mus muscu... 90.5 2e-17
sp|Q8QGQ8|PER2_CHICK Period circadian protein homolog 2 OS=Gallus... 87.4 2e-16
sp|O57539|NCOA3_XENLA Nuclear receptor coactivator 3 OS=Xenopus l... 87.0 2e-16
sp|Q25478|PER_MANSE Period circadian protein (Fragment) OS=Manduc... 84.0 4e-16
sp|Q8CHI5|PER1_RAT Period circadian protein homolog 1 OS=Rattus n... 85.9 5e-16
sp|O35973|PER1_MOUSE Period circadian protein homolog 1 OS=Mus mu... 85.9 6e-16
sp|Q9W705|NCOA2_XENLA Nuclear receptor coactivator 2 OS=Xenopus l... 84.7 1e-15
sp|O15534|PER1_HUMAN Period circadian protein homolog 1 OS=Homo s... 84.3 1e-15
sp|Q8K3T3|PER1_SPAJD Period circadian protein homolog 1 OS=Spalax... 84.0 2e-15
sp|Q9WUI9|NCOA2_RAT Nuclear receptor coactivator 2 OS=Rattus norv... 81.3 1e-14
sp|Q25020|PER_HYACE Period circadian protein (Fragment) OS=Hyalop... 79.0 2e-14
sp|Q98TW1|NCOA2_DANRE Nuclear receptor coactivator 2 OS=Danio rer... 80.5 3e-14
sp|Q61026|NCOA2_MOUSE Nuclear receptor coactivator 2 OS=Mus muscu... 80.5 3e-14
sp|Q15596|NCOA2_HUMAN Nuclear receptor coactivator 2 OS=Homo sapi... 79.7 4e-14
sp|Q3U1U7|AHRR_MOUSE Aryl hydrocarbon receptor repressor OS=Mus m... 74.3 2e-12
sp|A9YTQ3|AHRR_HUMAN Aryl hydrocarbon receptor repressor OS=Homo ... 72.0 8e-12
sp|Q75NT5|AHRR_RAT Aryl hydrocarbon receptor repressor OS=Rattus ... 71.6 1e-11
sp|O09000|NCOA3_MOUSE Nuclear receptor coactivator 3 OS=Mus muscu... 71.2 2e-11
sp|O44712|AHR_CAEEL Aryl hydrocarbon receptor protein 1 OS=Caenor... 64.3 2e-09
sp|G5EGD2|HIF1_CAEEL Hypoxia-inducible factor 1 OS=Caenorhabditis... 63.9 3e-09
sp|Q8CJH6|NPAS4_RAT Neuronal PAS domain-containing protein 4 OS=R... 62.4 1e-08
sp|Q8BGD7|NPAS4_MOUSE Neuronal PAS domain-containing protein 4 OS... 62.4 1e-08
sp|Q8IUM7|NPAS4_HUMAN Neuronal PAS domain-containing protein 4 OS... 62.0 1e-08
sp|P90953|HLH34_CAEEL Helix-loop-helix 34 OS=Caenorhabditis elega... 59.3 3e-08
sp|G5EFL9|NPASH_CAEEL PAS domain-containing protein cky-1 OS=Caen... 60.1 4e-08
sp|Q65ZG8|PER_CAEEL Period protein homolog lin-42 OS=Caenorhabdit... 56.2 6e-07
sp|Q1ECW2|NPS4A_DANRE Neuronal PAS domain-containing protein 4A O... 53.1 6e-06
sp|E7FFX1|NPS4B_DANRE Neuronal PAS domain-containing protein 4B O... 52.8 8e-06
sp|Q5A1E3|CBF1_CANAL Transcriptional regulator CBF1 OS=Candida al... 50.8 1e-05
sp|Q9NQ87|HEYL_HUMAN Hairy/enhancer-of-split related with YRPW mo... 50.4 2e-05
sp|Q0JNI9|PIL15_ORYSJ Transcription factor PHYTOCHROME INTERACTIN... 51.2 3e-05
sp|Q9DBX7|HEYL_MOUSE Hairy/enhancer-of-split related with YRPW mo... 49.3 6e-05
sp|Q2NL18|HEYL_BOVIN Hairy/enhancer-of-split related with YRPW mo... 48.9 8e-05
sp|Q9UBP5|HEY2_HUMAN Hairy/enhancer-of-split related with YRPW mo... 48.9 9e-05
sp|Q7KM13|HEY_DROME Hairy/enhancer-of-split related with YRPW mot... 48.9 1e-04
sp|Q15853|USF2_HUMAN Upstream stimulatory factor 2 OS=Homo sapien... 48.5 1e-04
sp|A6NFD8|HELT_HUMAN Hairy and enhancer of split-related protein ... 47.8 1e-04
sp|Q7TS99|HELT_MOUSE Hairy and enhancer of split-related protein ... 47.8 1e-04
sp|P0DOC7|NPS4L_DANRE Neuronal PAS domain-containing protein 4-li... 48.9 1e-04
sp|Q6QB00|HELT_DANRE Hairy and enhancer of split-related protein ... 47.4 2e-04
sp|Q8AXV6|HEY1_DANRE Hairy/enhancer-of-split related with YRPW mo... 47.4 2e-04
sp|Q9QUS4|HEY2_MOUSE Hairy/enhancer-of-split related with YRPW mo... 47.4 2e-04
sp|Q9I9L0|HEY2_DANRE Hairy/enhancer-of-split related with YRPW mo... 47.4 2e-04
sp|Q2KIN4|HEY1_BOVIN Hairy/enhancer-of-split related with YRPW mo... 47.0 3e-04
sp|Q9Y5J3|HEY1_HUMAN Hairy/enhancer-of-split related with YRPW mo... 47.0 3e-04
sp|Q9TSZ2|HEY1_CANLF Hairy/enhancer-of-split related with YRPW mo... 47.0 3e-04
sp|Q6AT90|APG_ORYSJ Transcription factor APG OS=Oryza sativa subs... 47.4 3e-04
sp|Q9WV93|HEY1_MOUSE Hairy/enhancer-of-split related with YRPW mo... 46.6 3e-04
sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis tha... 47.4 3e-04
sp|Q66KK8|HEY1_XENTR Hairy/enhancer-of-split related with YRPW mo... 46.6 3e-04
sp|Q9I8A3|HEY1_XENLA Hairy/enhancer-of-split related with YRPW mo... 46.6 4e-04
sp|Q63665|USF2_RAT Upstream stimulatory factor 2 OS=Rattus norveg... 46.2 5e-04
sp|Q64705|USF2_MOUSE Upstream stimulatory factor 2 OS=Mus musculu... 46.2 5e-04
sp|Q9VGZ5|CWO_DROME Transcription factor cwo OS=Drosophila melano... 46.6 6e-04
sp|Q10CH5|PIL13_ORYSJ Transcription factor PHYTOCHROME INTERACTIN... 46.2 7e-04
sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis tha... 45.8 0.001
sp|Q8AXV5|HEYL_DANRE Hairy/enhancer-of-split related with YRPW mo... 45.4 0.001
sp|O43019|SRE2_SCHPO Putative transcription factor sre2 OS=Schizo... 45.4 0.002
sp|Q6XBT4|USF1_BOVIN Upstream stimulatory factor 1 OS=Bos taurus ... 44.7 0.002
sp|P22415|USF1_HUMAN Upstream stimulatory factor 1 OS=Homo sapien... 44.7 0.002
sp|O02818|USF1_RABIT Upstream stimulatory factor 1 OS=Oryctolagus... 44.7 0.002
sp|Q61069|USF1_MOUSE Upstream stimulatory factor 1 OS=Mus musculu... 44.7 0.002
sp|O08609|MLX_MOUSE Max-like protein X OS=Mus musculus OX=10090 G... 43.5 0.003
sp|Q9UH92|MLX_HUMAN Max-like protein X OS=Homo sapiens OX=9606 GN... 43.5 0.003
sp|Q07957|USF1_XENBO Upstream stimulatory factor 1 OS=Xenopus bor... 43.5 0.004
sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis tha... 42.7 0.008
sp|Q9XEF0|BH051_ARATH Transcription factor bHLH51 OS=Arabidopsis ... 42.4 0.008
sp|Q07956|USF_STRPU Upstream stimulatory factor OS=Strongylocentr... 42.4 0.008
sp|O75030|MITF_HUMAN Microphthalmia-associated transcription fact... 42.4 0.011
sp|Q01371|WC1_NEUCR White collar 1 protein OS=Neurospora crassa (... 42.7 0.011
sp|H2KZZ2|HLH30_CAEEL Helix-loop-helix protein 30 OS=Caenorhabdit... 42.0 0.015
sp|Q10186|YAWC_SCHPO Uncharacterized bHLH domain-containing prote... 40.8 0.015
sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Ar... 41.6 0.020
sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis... 41.2 0.022
sp|Q64092|TFE3_MOUSE Transcription factor E3 OS=Mus musculus OX=1... 41.6 0.025
sp|P19484|TFEB_HUMAN Transcription factor EB OS=Homo sapiens OX=9... 41.2 0.026
sp|Q5RAI7|BHE40_PONAB Class E basic helix-loop-helix protein 40 O... 40.8 0.030
sp|Q9R210|TFEB_MOUSE Transcription factor EB OS=Mus musculus OX=1... 41.2 0.030
sp|O88368|MITF_RAT Microphthalmia-associated transcription factor... 40.8 0.034
sp|Q08874|MITF_MOUSE Microphthalmia-associated transcription fact... 40.8 0.035
sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis t... 40.4 0.038
sp|G5EEH5|MXL1_CAEEL Max-like protein 1 OS=Caenorhabditis elegans... 38.1 0.043
sp|O35779|BHE41_RAT Class E basic helix-loop-helix protein 41 OS=... 40.4 0.046
sp|Q99PV5|BHE41_MOUSE Class E basic helix-loop-helix protein 41 O... 40.4 0.048
sp|Q9C0J9|BHE41_HUMAN Class E basic helix-loop-helix protein 41 O... 40.0 0.060
sp|O14503|BHE40_HUMAN Class E basic helix-loop-helix protein 40 O... 39.7 0.070
sp|Q60416|SRBP1_CRIGR Sterol regulatory element-binding protein 1... 40.0 0.075
sp|Q9WTN3|SRBP1_MOUSE Sterol regulatory element-binding protein 1... 40.0 0.075
sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis ... 39.7 0.080
sp|Q05B92|TFE3_BOVIN Transcription factor E3 OS=Bos taurus OX=991... 39.7 0.088
sp|P13097|ESM7_DROME Enhancer of split m7 protein OS=Drosophila m... 38.1 0.093
sp|Q28DB3|MAD3_XENTR Max dimerization protein 3 OS=Xenopus tropic... 38.5 0.10
sp|P19532|TFE3_HUMAN Transcription factor E3 OS=Homo sapiens OX=9... 39.3 0.11
sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis t... 39.3 0.11
sp|Q0VH33|MAD3_XENLA Max dimerization protein 3 OS=Xenopus laevis... 38.1 0.13
sp|P56720|SRBP1_RAT Sterol regulatory element-binding protein 1 O... 39.3 0.14
sp|O97676|SRBP1_PIG Sterol regulatory element-binding protein 1 O... 38.9 0.16
sp|O35185|BHE40_MOUSE Class E basic helix-loop-helix protein 40 O... 38.5 0.16
sp|P36956|SRBP1_HUMAN Sterol regulatory element-binding protein 1... 38.9 0.17
sp|O35780|BHE40_RAT Class E basic helix-loop-helix protein 40 OS=... 38.5 0.17
sp|B3F209|BHE40_SHEEP Class E basic helix-loop-helix protein 40 O... 38.5 0.19
sp|Q5EA15|BHE40_BOVIN Class E basic helix-loop-helix protein 40 O... 38.5 0.19
sp|Q01069|ESMB_DROME Enhancer of split mbeta protein OS=Drosophil... 37.4 0.20
sp|Q570R7|PIF7_ARATH Transcription factor PIF7 OS=Arabidopsis tha... 38.1 0.20
sp|Q8VZ02|BH048_ARATH Transcription factor bHLH48 OS=Arabidopsis ... 37.7 0.25
sp|A0A3Q7H216|MTB3_SOLLC Transcription factor MTB3 OS=Solanum lyc... 38.1 0.26
sp|Q9FE22|HFR1_ARATH Transcription factor HFR1 OS=Arabidopsis tha... 37.7 0.27
sp|Q68DE3|USF3_HUMAN Basic helix-loop-helix domain-containing pro... 38.5 0.27
sp|Q7SX95|MAD3_DANRE Max dimerization protein 3 OS=Danio rerio OX... 37.0 0.27
sp|Q26263|DPN_DROME Protein deadpan OS=Drosophila melanogaster OX... 37.4 0.36
sp|A0A286LEZ9|PSIR_PSICY Psilocybin cluster transcription regulat... 37.4 0.37
sp|Q9LS08|BH032_ARATH Transcription factor AIG1 OS=Arabidopsis th... 37.4 0.38
sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis ... 37.4 0.38
sp|Q8IV76|PASD1_HUMAN Circadian clock protein PASD1 OS=Homo sapie... 37.4 0.47
sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thali... 37.0 0.47
sp|Q14582|MAD4_HUMAN Max dimerization protein 4 OS=Homo sapiens O... 36.2 0.50
sp|Q9HCC6|HES4_HUMAN Transcription factor HES-4 OS=Homo sapiens O... 36.2 0.52
sp|Q9S7Y1|BH030_ARATH Transcription factor bHLH30 OS=Arabidopsis ... 37.0 0.52
sp|Q9ZPW3|HBI1_ARATH Transcription factor HBI1 OS=Arabidopsis tha... 37.0 0.53
sp|P0DPB0|PSIR_PSICU Psilocybin cluster transcription regulator O... 36.6 0.64
sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thali... 35.8 0.66
sp|Q9LET0|BH107_ARATH Putative transcription factor bHLH107 OS=Ar... 36.2 0.68
sp|Q04666|HES1_RAT Transcription factor HES-1 OS=Rattus norvegicu... 36.2 0.71
sp|Q9SK91|BH094_ARATH Transcription factor bHLH94 OS=Arabidopsis ... 36.2 0.72
sp|Q14469|HES1_HUMAN Transcription factor HES-1 OS=Homo sapiens O... 36.2 0.72
sp|Q3ZBG4|HES1_BOVIN Transcription factor HES-1 OS=Bos taurus OX=... 36.2 0.72
sp|A3BV95|BCL1_ORYSJ Basic helix-loop-helix protein 80 OS=Oryza s... 36.2 0.73
sp|A2YXI4|BCL1_ORYSI Basic helix-loop-helix protein 80 OS=Oryza s... 36.2 0.73
sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis th... 36.2 0.77
sp|P49379|CBF1_KLULA Centromere-binding protein 1 OS=Kluyveromyce... 36.2 0.79
sp|Q6Z2G7|BCL2_ORYSJ Basic helix-loop-helix protein 79 OS=Oryza s... 36.2 0.95
sp|B8AH97|BCL2_ORYSI Basic helix-loop-helix protein 79 OS=Oryza s... 36.2 0.95
sp|Q9FMB6|BIM3_ARATH Transcription factor BIM3 OS=Arabidopsis tha... 35.8 0.96
sp|P35428|HES1_MOUSE Transcription factor HES-1 OS=Mus musculus O... 35.8 0.98
sp|Q336P5|MYC2_ORYSJ Transcription factor MYC2 OS=Oryza sativa su... 35.8 1.3
sp|Q9LEZ3|BIM1_ARATH Transcription factor BIM1 OS=Arabidopsis tha... 35.8 1.3
sp|Q5TGS1|HES3_HUMAN Transcription factor HES-3 OS=Homo sapiens O... 34.7 1.4
sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis ... 35.8 1.4
sp|Q69WS3|BH094_ORYSJ Transcription factor BHLH094 OS=Oryza sativ... 35.0 1.4
sp|Q61657|HES3_MOUSE Transcription factor HES-3 OS=Mus musculus O... 34.7 1.5
sp|E3SXU4|BHLHW_PEA Basic helix-loop-helix protein A OS=Pisum sat... 35.8 1.6
sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis ... 35.4 1.7
sp|Q3EAI1|BH060_ARATH Transcription factor bHLH60 OS=Arabidopsis ... 35.0 1.9
sp|Q5TA89|HES5_HUMAN Transcription factor HES-5 OS=Homo sapiens O... 34.3 1.9
sp|P17106|CBF1_YEAST Centromere-binding protein 1 OS=Saccharomyce... 35.0 1.9
sp|Q12398|HMS1_YEAST Probable transcription factor HMS1 OS=Saccha... 35.0 2.0
sp|Q9W6C8|NDF2_DANRE Neurogenic differentiation factor 2 OS=Danio... 35.0 2.0
sp|Q6PBD4|HES4_XENTR Transcription factor HES-4 OS=Xenopus tropic... 34.7 2.0
sp|P70120|HES5_MOUSE Transcription factor HES-5 OS=Mus musculus O... 33.9 2.1
sp|Q28555|HAND1_SHEEP Heart- and neural crest derivatives-express... 34.3 2.1
sp|Q84T08|BH089_ORYSJ Transcription factor BHLH089 OS=Oryza sativ... 34.7 2.1
sp|Q10574|LIN32_CAEEL Protein lin-32 OS=Caenorhabditis elegans OX... 33.5 2.2
sp|Q90VV1|HES4B_XENLA Transcription factor HES-4-B OS=Xenopus lae... 34.7 2.2
sp|Q90Z12|HES4A_XENLA Transcription factor HES-4-A OS=Xenopus lae... 34.7 2.2
sp|Q9D489|SOLH2_MOUSE Spermatogenesis- and oogenesis-specific bas... 35.0 2.2
sp|Q93W88|BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis... 34.7 2.3
sp|Q60948|MAD4_MOUSE Max dimerization protein 4 OS=Mus musculus O... 34.3 2.3
sp|Q9Z304|MYCS_MOUSE Protein S-Myc OS=Mus musculus OX=10090 GN=My... 35.0 2.4
sp|Q5ADL8|TRY6_CANAL Transcriptional regulator of yeast form adhe... 35.0 2.4
sp|Q3MHT3|SOLH2_RAT Spermatogenesis- and oogenesis-specific basic... 34.7 2.5
sp|Q6IRB2|HES1A_XENLA Transcription factor HES-1-A OS=Xenopus lae... 34.3 2.6
sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis ... 34.7 2.6
sp|Q8AVU4|HES1B_XENLA Transcription factor HES-1-B OS=Xenopus lae... 34.3 2.7
sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis ... 34.3 2.7
sp|P97832|HAND1_RAT Heart- and neural crest derivatives-expressed... 34.3 2.7
sp|Q08DI0|NDF6_BOVIN Neurogenic differentiation factor 6 OS=Bos t... 34.7 2.8
sp|P57100|HAND1_RABIT Heart- and neural crest derivatives-express... 33.9 2.8
sp|O08789|MNT_MOUSE Max-binding protein MNT OS=Mus musculus OX=10... 34.7 2.8
sp|Q9C670|BH076_ARATH Transcription factor bHLH76 OS=Arabidopsis ... 34.7 2.8
sp|Q4R5G6|NDF6_MACFA Neurogenic differentiation factor 6 OS=Macac... 34.7 2.9
sp|Q96NK8|NDF6_HUMAN Neurogenic differentiation factor 6 OS=Homo ... 34.7 2.9
sp|P48986|NDF6_MOUSE Neurogenic differentiation factor 6 OS=Mus m... 34.3 2.9
sp|Q99583|MNT_HUMAN Max-binding protein MNT OS=Homo sapiens OX=96... 34.7 3.0
sp|A0A2R6QE26|BHL42_ACTCC Transcription factor BHLH42 OS=Actinidi... 34.7 3.0
sp|Q5PPM5|HES1_XENTR Transcription factor HES-1 OS=Xenopus tropic... 34.3 3.2
sp|O73615|HAND1_XENLA Heart- and neural crest derivatives-express... 33.9 3.2
sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis ... 34.3 3.4
sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE ... 34.3 3.6
sp|Q6NYU3|NDF6A_DANRE Neurogenic differentiation factor 6-A OS=Da... 34.3 3.6
sp|P10166|MYCL_MOUSE Protein L-Myc OS=Mus musculus OX=10090 GN=My... 34.3 3.6
sp|P23999|MYCS_RAT Protein S-Myc OS=Rattus norvegicus OX=10116 GN... 34.3 3.8
sp|O57337|HES1_CHICK Transcription factor HES-1 OS=Gallus gallus ... 33.9 3.8
sp|Q0VCE2|HAND1_BOVIN Heart- and neural crest derivatives-express... 33.5 4.1
sp|P12524|MYCL_HUMAN Protein L-Myc OS=Homo sapiens OX=9606 GN=MYC... 33.9 4.2
sp|P29303|HAIR_DROVI Protein hairy OS=Drosophila virilis OX=7244 ... 33.9 4.8
sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis ... 33.9 5.2
sp|Q01071|ESMD_DROME Enhancer of split mdelta protein OS=Drosophi... 32.7 5.3
sp|O96004|HAND1_HUMAN Heart- and neural crest derivatives-express... 33.1 5.5
sp|Q9W6C7|NDF6B_DANRE Neurogenic differentiation factor 6-B OS=Da... 33.5 5.9
sp|Q0VH32|MNT_XENLA Max-binding protein MNT OS=Xenopus laevis OX=... 33.9 6.0
sp|Q62912|MAD3_RAT Max dimerization protein 3 OS=Rattus norvegicu... 33.1 6.0
sp|P16497|KINA_BACSU Sporulation kinase A OS=Bacillus subtilis (s... 33.9 6.0
sp|Q9UUD1|SREBP_SCHPO Sterol regulatory element-binding protein 1... 33.9 6.1
sp|Q8XU10|KDPC_RALN1 Potassium-transporting ATPase KdpC subunit O... 33.1 6.1
sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis tha... 33.1 6.2
sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis tha... 33.5 6.6
sp|Q01068|ESM3_DROME Enhancer of split m3 protein OS=Drosophila m... 33.1 6.7
sp|Q04667|HES3_RAT Transcription factor HES-3 OS=Rattus norvegicu... 32.3 7.0
sp|P47185|HXT16_YEAST Hexose transporter HXT16 OS=Saccharomyces c... 33.5 7.6
sp|P54854|HXT15_YEAST Hexose transporter HXT15 OS=Saccharomyces c... 33.5 7.6
sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis ... 33.1 7.8
sp|Q03062|HES5_RAT Transcription factor HES-5 OS=Rattus norvegicu... 32.3 8.0
sp|P38165|RTG3_YEAST Retrograde regulation protein 3 OS=Saccharom... 33.1 8.0
sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis ... 33.1 8.3
sp|Q17R07|ARFG3_BOVIN ADP-ribosylation factor GTPase-activating p... 33.1 8.5
sp|Q9CAA4|BIM2_ARATH Transcription factor BIM2 OS=Arabidopsis tha... 32.7 9.0
sp|Q80US8|MAD3_MOUSE Max dimerization protein 3 OS=Mus musculus O... 32.3 9.1
sp|Q9NX45|SOLH2_HUMAN Spermatogenesis- and oogenesis-specific bas... 33.1 9.2
sp|P14003|HAIR_DROME Protein hairy OS=Drosophila melanogaster OX=... 32.7 9.6
sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis ... 32.7 9.9
>sp|O00327|BMAL1_HUMAN Basic helix-loop-helix ARNT-like protein
1 OS=Homo sapiens OX=9606 GN=BMAL1 PE=1 SV=2
Length=626
Score = 1299 bits (3362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/626 (100%), Positives = 626/626 (100%), Gaps = 0/626 (0%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR
Sbjct 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ
Sbjct 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
Query 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL
Sbjct 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
Query 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC
Sbjct 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE
Sbjct 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
Query 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI
Sbjct 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
Query 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW
Sbjct 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
Query 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT 480
FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT
Sbjct 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT 480
Query 481 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI
Sbjct 481 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
Query 541 LNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 600
LNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM
Sbjct 541 LNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 600
Query 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
AVIMSLLEADAGLGGPVDFSDLPWPL
Sbjct 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
>sp|Q5R4T2|BMAL1_PONAB Basic helix-loop-helix ARNT-like protein
1 OS=Pongo abelii OX=9601 GN=BMAL1 PE=2 SV=1
Length=625
Score = 1289 bits (3335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/626 (99%), Positives = 623/626 (99%), Gaps = 1/626 (0%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR
Sbjct 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ
Sbjct 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
Query 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSES FKIL
Sbjct 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESAFKIL 180
Query 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC
Sbjct 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKK DRKSFCTIHSTGYLKSWPPTKMGLDE
Sbjct 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKK-DRKSFCTIHSTGYLKSWPPTKMGLDE 299
Query 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI
Sbjct 300 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 359
Query 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW
Sbjct 360 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 419
Query 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT 480
FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASP SMDSMLPSGEGGPKRTHPT
Sbjct 420 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPRSMDSMLPSGEGGPKRTHPT 479
Query 481 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI
Sbjct 480 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 539
Query 541 LNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 600
LNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM
Sbjct 540 LNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 599
Query 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
AVIMSLLEADAGLGGPVDFSDLPWPL
Sbjct 600 AVIMSLLEADAGLGGPVDFSDLPWPL 625
>sp|O88529|BMAL1_MESAU Basic helix-loop-helix ARNT-like protein
1 OS=Mesocricetus auratus OX=10036 GN=BMAL1 PE=2 SV=1
Length=626
Score = 1288 bits (3332), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/626 (99%), Positives = 622/626 (99%), Gaps = 0/626 (0%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGS+TDYQESMDTDKDDPHGR
Sbjct 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSATDYQESMDTDKDDPHGR 60
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
LEY EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ
Sbjct 61 LEYAEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
Query 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL
Sbjct 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
Query 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC
Sbjct 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
SGARRSFFCRMKCNRPSVKVEDKDF STCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE
Sbjct 241 SGARRSFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
Query 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI
Sbjct 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
Query 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW
Sbjct 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
Query 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT 480
FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT
Sbjct 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT 480
Query 481 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI
Sbjct 481 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
Query 541 LNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 600
LNGGTPDIPS+GLL GQAQE PGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM
Sbjct 541 LNGGTPDIPSTGLLPGQAQETPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 600
Query 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
AVIMSLLEADAGLGGPVDFSDLPWPL
Sbjct 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
>sp|A0MLS5|BMAL1_HORSE Basic helix-loop-helix ARNT-like protein
1 OS=Equus caballus OX=9796 GN=BMAL1 PE=2 SV=1
Length=626
Score = 1286 bits (3329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/626 (99%), Positives = 622/626 (99%), Gaps = 0/626 (0%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
MADQRMDISSTISDFMSPG TDLLSS LGTSG+DCNRKRKGSSTDYQESMDTDKDDPHGR
Sbjct 1 MADQRMDISSTISDFMSPGATDLLSSPLGTSGMDCNRKRKGSSTDYQESMDTDKDDPHGR 60
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ
Sbjct 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
Query 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL
Sbjct 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
Query 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC
Sbjct 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE
Sbjct 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
Query 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI
Sbjct 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
Query 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW
Sbjct 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
Query 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT 480
FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT
Sbjct 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT 480
Query 481 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
VPGIPGGTRAGAGKIGRMIAEE+MEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI
Sbjct 481 VPGIPGGTRAGAGKIGRMIAEEVMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
Query 541 LNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 600
LNGGTPDIPSSGL GQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM
Sbjct 541 LNGGTPDIPSSGLPPGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 600
Query 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
AVIMSLLEADAGLGGPVDFSDLPWPL
Sbjct 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
>sp|Q91YA9|BMAL1_NANGA Basic helix-loop-helix ARNT-like protein
1 OS=Nannospalax galili OX=1026970 GN=Bmal1 PE=1 SV=1
Length=626
Score = 1279 bits (3309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 616/626 (98%), Positives = 620/626 (99%), Gaps = 0/626 (0%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR
Sbjct 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ
Sbjct 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
Query 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL
Sbjct 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
Query 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC
Sbjct 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE
Sbjct 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
Query 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
DNE D+EGCNLSCLVAIGRLHSHVVPQP G+I+VKS EYVSRHAIDGKFVFVDQRATAI
Sbjct 301 DNEADSEGCNLSCLVAIGRLHSHVVPQPAGGDIKVKSTEYVSRHAIDGKFVFVDQRATAI 360
Query 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW
Sbjct 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
Query 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT 480
FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPK+THPT
Sbjct 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKKTHPT 480
Query 481 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI
Sbjct 481 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
Query 541 LNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 600
LNGGTPDIPSSGLL GQAQENPGYPYSDSSSILGENPHI IDMIDNDQGSSSPSNDEAAM
Sbjct 541 LNGGTPDIPSSGLLPGQAQENPGYPYSDSSSILGENPHISIDMIDNDQGSSSPSNDEAAM 600
Query 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
AVIMSLLEADAGLGGPVDFSDLPWPL
Sbjct 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
>sp|Q9EPW1|BMAL1_RAT Basic helix-loop-helix ARNT-like protein
1 OS=Rattus norvegicus OX=10116 GN=Bmal1 PE=2 SV=4
Length=626
Score = 1278 bits (3306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/626 (98%), Positives = 619/626 (99%), Gaps = 0/626 (0%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
MADQRMDISSTISDFMSPGPTDLLS SL TSGVDCNRKRKGS+TDYQESMDTDKDDPHGR
Sbjct 1 MADQRMDISSTISDFMSPGPTDLLSGSLSTSGVDCNRKRKGSATDYQESMDTDKDDPHGR 60
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
LEY EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ
Sbjct 61 LEYAEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
Query 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
HMKTLRGATNPYTEANYKPT LSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL
Sbjct 121 HMKTLRGATNPYTEANYKPTSLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
Query 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC
Sbjct 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
SGARRSFFCRMKCNRPSVKVEDKDF STCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE
Sbjct 241 SGARRSFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
Query 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
D+EPDNEGCNLSCLVAIGRLHSH+VPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI
Sbjct 301 DSEPDNEGCNLSCLVAIGRLHSHMVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
Query 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW
Sbjct 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
Query 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT 480
FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT
Sbjct 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT 480
Query 481 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI
Sbjct 481 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
Query 541 LNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 600
LNGGTPDIPS+GLL GQAQE PGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM
Sbjct 541 LNGGTPDIPSAGLLPGQAQETPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 600
Query 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
AVIMSLLEADAGLGGPVDFSDLPWPL
Sbjct 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
>sp|Q9WTL8|BMAL1_MOUSE Basic helix-loop-helix ARNT-like protein
1 OS=Mus musculus OX=10090 GN=Bmal1 PE=1 SV=2
Length=632
Score = 1267 bits (3278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/633 (97%), Positives = 618/633 (98%), Gaps = 8/633 (1%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQ-------ESMDTD 53
MADQRMDISSTISDFMSPGPTDLLS SLGTSGVDCNRKRKGS+TDYQ ESMDTD
Sbjct 1 MADQRMDISSTISDFMSPGPTDLLSGSLGTSGVDCNRKRKGSATDYQLDDFAFEESMDTD 60
Query 54 KDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT 113
KDDPHGRLEY EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT
Sbjct 61 KDDPHGRLEYAEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT 120
Query 114 VLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVS 173
VLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVS
Sbjct 121 VLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVS 180
Query 174 ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT 233
ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT
Sbjct 181 ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT 240
Query 234 PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP 293
PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDF STCSKKK DRKSFCTIHSTGYLKSWPP
Sbjct 241 PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFASTCSKKK-DRKSFCTIHSTGYLKSWPP 299
Query 294 TKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFV 353
TKMGLDEDNEPDNEGCNLSCLVAIGRLHSH+VPQP NGEIRVKSMEYVSRHAIDGKFVFV
Sbjct 300 TKMGLDEDNEPDNEGCNLSCLVAIGRLHSHMVPQPANGEIRVKSMEYVSRHAIDGKFVFV 359
Query 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 413
DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF
Sbjct 360 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 419
Query 414 ITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGG 473
ITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTA PHSMDSMLPSGEGG
Sbjct 420 ITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTAPPHSMDSMLPSGEGG 479
Query 474 PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDAS 533
PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDAS
Sbjct 480 PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDAS 539
Query 534 SPGGKKILNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSP 593
SPGGKKILNGGTPDIPS+GLL GQAQE PGYPYSDSSSILGENPHIGIDMIDNDQGSSSP
Sbjct 540 SPGGKKILNGGTPDIPSTGLLPGQAQETPGYPYSDSSSILGENPHIGIDMIDNDQGSSSP 599
Query 594 SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 626
SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
Sbjct 600 SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 632
>sp|Q6YGZ5|BMAL1_TYTAL Basic helix-loop-helix ARNT-like protein
1 OS=Tyto alba OX=56313 GN=BMAL1 PE=2 SV=1
Length=633
Score = 1205 bits (3117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 595/633 (94%), Positives = 604/633 (95%), Gaps = 7/633 (1%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQ-------ESMDTD 53
MADQRMDISSTISDFMSP P DL+SSSL TSG+DCNRKRKGSSTDYQ E MDTD
Sbjct 1 MADQRMDISSTISDFMSPDPADLISSSLSTSGMDCNRKRKGSSTDYQLDGFPFEEGMDTD 60
Query 54 KDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT 113
KDD HGRLEYT+ QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT
Sbjct 61 KDDQHGRLEYTDQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT 120
Query 114 VLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVS 173
VLRMAVQHMKTLRGATNPYTEANYKP FLSDDELKHLILRAADGFLFVVGCDRGKILFVS
Sbjct 121 VLRMAVQHMKTLRGATNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVS 180
Query 174 ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT 233
ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT
Sbjct 181 ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT 240
Query 234 PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP 293
PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP
Sbjct 241 PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP 300
Query 294 TKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFV 353
TKMGLDEDNEPDNEGCNLSCLVAIGRLH HVVPQPVNGEIRVK EYVSRHAIDGKFVFV
Sbjct 301 TKMGLDEDNEPDNEGCNLSCLVAIGRLHPHVVPQPVNGEIRVKPTEYVSRHAIDGKFVFV 360
Query 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 413
DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF
Sbjct 361 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 420
Query 414 ITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGG 473
ITLRSRWFSFMNPWTKEVEYIVSTNTVV NVL+ GD FPQL ASPHSMDS+L +GEGG
Sbjct 421 ITLRSRWFSFMNPWTKEVEYIVSTNTVVSTNVLDSGDAAFPQLAASPHSMDSVLQAGEGG 480
Query 474 PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDAS 533
PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPD S
Sbjct 481 PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDTS 540
Query 534 SPGGKKILNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSP 593
SPGGKKILNGGTPDI S+GLLSGQ Q+N GYPYSD+SSILGEN HIGIDMIDNDQGSSSP
Sbjct 541 SPGGKKILNGGTPDISSAGLLSGQIQDNSGYPYSDNSSILGENSHIGIDMIDNDQGSSSP 600
Query 594 SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 626
SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
Sbjct 601 SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 633
>sp|Q9I8T7|BMAL1_CHICK Basic helix-loop-helix ARNT-like protein
1 OS=Gallus gallus OX=9031 GN=BMAL1 PE=1 SV=1
Length=633
Score = 1195 bits (3091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/633 (93%), Positives = 602/633 (95%), Gaps = 7/633 (1%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQ-------ESMDTD 53
MADQRMDISSTISDFMSP P DL+SSSL TSGVDCNRKRKGSSTDYQ E MDTD
Sbjct 1 MADQRMDISSTISDFMSPDPADLISSSLSTSGVDCNRKRKGSSTDYQLDGFPFEEGMDTD 60
Query 54 KDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT 113
KDD HGRL+Y + QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT
Sbjct 61 KDDQHGRLDYADQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT 120
Query 114 VLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVS 173
VLRMAVQHMKTLRGATNPYTEANYKP FLSDDELKHLILRAADGFLFVVGCDRGKILFVS
Sbjct 121 VLRMAVQHMKTLRGATNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVS 180
Query 174 ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT 233
ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT
Sbjct 181 ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT 240
Query 234 PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP 293
PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP
Sbjct 241 PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP 300
Query 294 TKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFV 353
TKMGLDEDNEPDNEGCNLSCLVAIGRLH HVVPQPVNGEIRVK EYVSRHAIDGKFVFV
Sbjct 301 TKMGLDEDNEPDNEGCNLSCLVAIGRLHPHVVPQPVNGEIRVKPTEYVSRHAIDGKFVFV 360
Query 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 413
DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF
Sbjct 361 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 420
Query 414 ITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGG 473
ITLRSRWFSFMNPWTKEVEYIVSTNTVV +VL+ GD FPQL ASPHSMDS+L +GEGG
Sbjct 421 ITLRSRWFSFMNPWTKEVEYIVSTNTVVSTSVLDSGDAAFPQLAASPHSMDSVLQAGEGG 480
Query 474 PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDAS 533
PKR+HPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPD S
Sbjct 481 PKRSHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDTS 540
Query 534 SPGGKKILNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSP 593
SPG KKILNGGTPDI S+GLLSGQ Q++ GYPYSD+SSILGEN HIGIDMIDNDQGSSSP
Sbjct 541 SPGSKKILNGGTPDISSAGLLSGQIQDSSGYPYSDNSSILGENSHIGIDMIDNDQGSSSP 600
Query 594 SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 626
SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
Sbjct 601 SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 633
>sp|Q8QGQ7|BMAL2_CHICK Basic helix-loop-helix ARNT-like protein
2 OS=Gallus gallus OX=9031 GN=BMAL2 PE=1 SV=1
Length=622
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/621 (54%), Positives = 435/621 (70%), Gaps = 31/621 (5%)
Query 8 ISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQ 67
I+S + M+P T ++S S V+ RKRKGS +D Q++++ D DP R E EH
Sbjct 31 IASGVPSLMNP-ITKPATTSFNNSVVEIPRKRKGSDSDNQDTVEVD-GDPQKRNEDEEHL 88
Query 68 GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
+IK+ REAHSQ EKRRRDKMN+ I+EL++++P CN M+RKLDKLTVLRMAVQH+K+L+G
Sbjct 89 -KIKDFREAHSQTEKRRRDKMNNLIEELSAMIPQCNPMARKLDKLTVLRMAVQHLKSLKG 147
Query 128 ATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDL 187
+T+ YTE YKP+FL DDEL+ LILRAADGFLFVVGC+RGKILFVSESV KILNY Q L
Sbjct 148 STSSYTEVRYKPSFLKDDELRQLILRAADGFLFVVGCNRGKILFVSESVCKILNYDQTSL 207
Query 188 IGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSF 247
IGQSLFDYLHPKD+AKVKEQLSSSD +PRE+L+D KTGL V TD GP+RL SGARRSF
Sbjct 208 IGQSLFDYLHPKDVAKVKEQLSSSDVSPREKLVDGKTGLQVHTDFQAGPARLNSGARRSF 267
Query 248 FCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNE 307
FCR+KC+R +VK E + P+ KK D + +CTIH TGY+K+WPP+++G++E+N+ +
Sbjct 268 FCRIKCSRTTVKEEKECLPNP---KKKDHRKYCTIHCTGYMKNWPPSEVGVEEENDVEKN 324
Query 308 GCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
N +CLVAIGRLH ++VPQ +GEI+VK+ E+V+R A+DGKFV+VDQRATAIL YLPQE
Sbjct 325 SSNFNCLVAIGRLHPYIVPQK-SGEIKVKATEFVTRFAMDGKFVYVDQRATAILGYLPQE 383
Query 368 LLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPW 427
LLGTSCYEY HQDD HLAE H++VLQ +EK+ TN YKF+ KDGSFITL+S+WFSFMNPW
Sbjct 384 LLGTSCYEYCHQDDHNHLAEKHKEVLQNKEKVFTNSYKFRAKDGSFITLKSQWFSFMNPW 443
Query 428 TKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGG 487
TKE+EYIVS NTVVL + + Q++ EG K++ +VPG+ G
Sbjct 444 TKELEYIVSNNTVVLGH----NESAEEQVSYGSQ-------PAEGAVKQSLVSVPGMSSG 492
Query 488 TRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGGTPD 547
T GAG IG IA EI+E+ R+ S P SP ++ P A + + N
Sbjct 493 TVLGAGSIGTEIANEILELQRLHSSPPGEL--SPSHLLRKSPSPALTVNCSNVPNKELIQ 550
Query 548 I-PSSGLLSGQAQENPG-YPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAMAVIMS 605
+ PS + +++N G P+ + +LG N + + + ND+ AM +M+
Sbjct 551 LCPSEAEVLETSEQNQGAIPFPSNEPLLGGNSQLDFAICE---------NDDTAMTALMN 601
Query 606 LLEADAGLGGPVDFSDLPWPL 626
LEAD GLG P + SD+ W L
Sbjct 602 YLEADGGLGDPAELSDIQWAL 622
>sp|Q8WYA1|BMAL2_HUMAN Basic helix-loop-helix ARNT-like protein
2 OS=Homo sapiens OX=9606 GN=BMAL2 PE=1 SV=2
Length=636
Score = 577 bits (1488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/649 (49%), Positives = 420/649 (65%), Gaps = 49/649 (8%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTD-YQESMDTDK----- 54
+ ++ I+ +S +SPG S + + RKRKGS +D Q + T+K
Sbjct 14 LREENQCIAPVVSSRVSPGTRPTAMGSFSSHMTEFPRKRKGSDSDPSQSGIMTEKVVEKL 73
Query 55 -DDP---------------HGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASL 98
+P R+E EHQ ++K REAHSQ EKRRRDKMN+ I+EL+++
Sbjct 74 SQNPLTYLLSTRIEISASSGSRVEDGEHQVKMKAFREAHSQTEKRRRDKMNNLIEELSAM 133
Query 99 VPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGF 158
+P CN M+RKLDKLTVLRMAVQH+++L+G TN Y +NY+P+FL D+EL+HLIL+ A+GF
Sbjct 134 IPQCNPMARKLDKLTVLRMAVQHLRSLKGLTNSYVGSNYRPSFLQDNELRHLILKTAEGF 193
Query 159 LFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRER 218
LFVVGC+RGKILFVS+SV KILNY Q L GQSLFD+LHPKD+AKVKEQLSS D +PRE+
Sbjct 194 LFVVGCERGKILFVSKSVSKILNYDQASLTGQSLFDFLHPKDVAKVKEQLSSFDISPREK 253
Query 219 LIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKS 278
LIDAKTGL V +++ G +R+ SG+RRSFFCR+K + SVK E P+ SKKK RK
Sbjct 254 LIDAKTGLQVHSNLHAGRTRVYSGSRRSFFCRIKSCKISVKEEHGCLPN--SKKKEHRK- 310
Query 279 FCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSM 338
F TIH TGYL+SWPP +G++E+ + N +CLVAIGRL ++VPQ +GEI VK
Sbjct 311 FYTIHCTGYLRSWPPNIVGMEEERNSKKDNSNFTCLVAIGRLQPYIVPQN-SGEINVKPT 369
Query 339 EYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREK 398
E+++R A++GKFV+VDQRATAIL YLPQELLGTSCYEYFHQDD +L + H+ VLQ++EK
Sbjct 370 EFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAVLQSKEK 429
Query 399 ITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTA 458
I T+ YKF+ KDGSF+TL+S+WFSF NPWTKE+EYIVS NT+VL + E G+ +F
Sbjct 430 ILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLVLGHS-EPGEASF----- 483
Query 459 SPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCG 518
+ S E +++ +VPG+ GT GAG IG IA EI+++ R++ SS
Sbjct 484 ----LPCSSQSSEESSRQSCMSVPGMSTGTVLGAGSIGTDIANEILDLQRLQSSSYLDDS 539
Query 519 SSPLNITSTPPPDASSPGGKKILNGGTPDIPSS-GLLSGQAQENPGYPYSDSSSILGENP 577
S + T + S K++ P PS G L Q +L +
Sbjct 540 SPTGLMKDTHTVNCRSMSNKELF----PPSPSEMGELEATRQNQSTVAVHSHEPLLSDGA 595
Query 578 HIGIDMIDNDQGSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 626
+ D + + ND+ AMA M+ LEA+ GLG P DFSD+ W L
Sbjct 596 QLDFDALCD--------NDDTAMAAFMNYLEAEGGLGDPGDFSDIQWTL 636
>sp|Q2VPD4|BMAL2_MOUSE Basic helix-loop-helix ARNT-like protein
2 OS=Mus musculus OX=10090 GN=Bmal2 PE=1 SV=2
Length=579
Score = 487 bits (1254), Expect = 3e-165, Method: Compositional matrix adjust.
Identities = 274/567 (48%), Positives = 364/567 (64%), Gaps = 51/567 (9%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
REAHSQ+EKRRRDKMN I +L+S++P + KLDKL+VLR AVQ++++LRG T Y
Sbjct 50 REAHSQMEKRRRDKMNHLIQKLSSMIPPHIPTAHKLDKLSVLRRAVQYLRSLRGMTELYL 109
Query 134 EANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLF 193
N KP+F+ D EL HLIL+AA+GFLFVVGC+RG+I +VS+SV K L Y Q LIGQ+LF
Sbjct 110 GENSKPSFIQDKELSHLILKAAEGFLFVVGCERGRIFYVSKSVSKTLRYDQASLIGQNLF 169
Query 194 DYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMK- 252
D+LHPKD+AKVKEQL S D +PRE+ ID KT V + G R+ SG+RRSFF RMK
Sbjct 170 DFLHPKDVAKVKEQL-SCDGSPREKPIDTKTS-QVYSHPYTGRPRMHSGSRRSFFFRMKS 227
Query 253 CNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLS 312
C P V+++ S+CSKKK RK F T+H TGYL+SWP +G+++++ + L+
Sbjct 228 CTVP---VKEEQPCSSCSKKKDHRK-FHTVHCTGYLRSWPLNVVGMEKESGGGKDSGPLT 283
Query 313 CLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTS 372
CLVA+GRLH ++VPQ +G+I V+ E+++R A++GKFV+VDQRATAIL YLPQELLGTS
Sbjct 284 CLVAMGRLHPYIVPQK-SGKINVRPAEFITRFAMNGKFVYVDQRATAILGYLPQELLGTS 342
Query 373 CYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVE 432
CYEYFHQDD L + H+ VLQ++EKI T+ YKF++KDG+F+TL+S WFSF NPWTKE+E
Sbjct 343 CYEYFHQDDHSSLTDKHKAVLQSKEKILTDSYKFRVKDGAFVTLKSEWFSFTNPWTKELE 402
Query 433 YIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGA 492
YIVS NT+VL G T L S S E +++ VPG+ GT GA
Sbjct 403 YIVSVNTLVL-----GRSETRLSLLHCGGSSQ----SSEDSFRQSCINVPGVSTGTVLGA 453
Query 493 GKIGRMIAEEIMEIHRIRGSSP-------------SSCGSSPLNITSTPPPDASSPGGKK 539
G IG IA E++ + R+ SSP S G + ST P A SP +
Sbjct 454 GSIGTDIANEVLSLQRLHSSSPEDASPSEEVRDDCSVNGGNAYGPASTREPFAVSPSETE 513
Query 540 ILNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAA 599
+L Q+ E P +P+ + G++ +G D++ + +D
Sbjct 514 VLEAAR---------QHQSTE-PAHPH---GPLPGDSAQLGFDVLCD--------SDSID 552
Query 600 MAVIMSLLEADAGLGGPVDFSDLPWPL 626
MA M+ LEA+ GLG P DFSD+ W L
Sbjct 553 MAAFMNYLEAEGGLGDPGDFSDIQWAL 579
>sp|O61734|CYCL_DROME Protein cycle OS=Drosophila melanogaster
OX=7227 GN=cyc PE=1 SV=2
Length=413
Score = 424 bits (1091), Expect = 5e-143, Method: Compositional matrix adjust.
Identities = 210/387 (54%), Positives = 280/387 (72%), Gaps = 17/387 (4%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA-- 128
+N ++ HS+IEKRRRDKMN++I+EL+S++P C AM RKLDKLTVLRMAVQH++ +RG+
Sbjct 29 ENRKQNHSEIEKRRRDKMNTYINELSSMIPMCFAMQRKLDKLTVLRMAVQHLRGIRGSGS 88
Query 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
+P+ ++Y+P+FLSD ELK +IL+A++GFLFVVGCDRG+IL+VS+SV +LN +Q DL+
Sbjct 89 LHPFNGSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNSTQADLL 148
Query 189 GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFF 248
GQS FD LHPKDI KVKEQLSS + PRERLIDAKT LPVKTD+ RLC GARRSFF
Sbjct 149 GQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSLCRLCPGARRSFF 208
Query 249 CRMKCNRPS---VKVEDKDFPSTCSKKKADRKSFCT------IHSTGYLKSWPPTKMGLD 299
CRMK S +K E+ D S+ + T I TGYLKSW P K D
Sbjct 209 CRMKLRTASNNQIK-EESDTSSSSRSSTKRKSRLTTGHKYRVIQCTGYLKSWTPIK-DED 266
Query 300 EDNEPDNEGCNLSCLVAIGRLHSHV----VPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQ 355
+D + D + NLSCLVAIGR+ +V VP ++ ++ + ++SRH+ +GKF+F+DQ
Sbjct 267 QDADSDEQTTNLSCLVAIGRIPPNVRNSTVPASLDNHPNIRHVLFISRHSGEGKFLFIDQ 326
Query 356 RATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFIT 415
RAT ++ +LPQE+LGTS YEYFH +DI L E H+ V+Q EK+TT Y+F+ KD S+I
Sbjct 327 RATLVIGFLPQEILGTSFYEYFHNEDIAALMESHKMVMQVPEKVTTQVYRFRCKDNSYIQ 386
Query 416 LRSRWFSFMNPWTKEVEYIVSTNTVVL 442
L+S W +F NPWT E++YI++ N+V L
Sbjct 387 LQSEWRAFKNPWTSEIDYIIAKNSVFL 413
>sp|O15945|ARNT_DROME Aryl hydrocarbon receptor nuclear translocator
homolog OS=Drosophila melanogaster OX=7227 GN=tgo PE=1
SV=3
Length=642
Score = 339 bits (869), Expect = 8e-107, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 247/374 (66%), Gaps = 10/374 (3%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
+RE H +IE+RRR+KM ++I EL+ +VPTC+A++RK DKLT+LRMAV HMK LRG N
Sbjct 14 SRENHCEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVAHMKALRGTGNTS 73
Query 133 TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSL 192
++ YKP+FL+D ELKHLIL AADGFLFVV CD G++++VS+SV +LNY+Q+D G SL
Sbjct 74 SDGTYKPSFLTDQELKHLILEAADGFLFVVSCDSGRVIYVSDSVTPVLNYTQSDWYGTSL 133
Query 193 FDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMK 252
++++HP D K++EQLS+ ++ R++D K+G VK + RL GARR F CRM+
Sbjct 134 YEHIHPDDREKIREQLSTQESQNAGRILDLKSGT-VKKEGHQSSMRLSMGARRGFICRMR 192
Query 253 CNRPSVKVEDKDFPSTCSKKKA-----DRKSFCTIHSTGYLKSWPPTKMGLDEDNEPD-N 306
+ + + ++ + D ++ +H TGY+K+WPPT M + E D +
Sbjct 193 VGNVNPESMVSGHLNRLKQRNSLGPSRDGTNYAVVHCTGYIKNWPPTDMFPNMHMERDVD 252
Query 307 EGCNLSCLVAIGRLH-SHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLP 365
+ + CLVAIGRL + ++G E+++RHA+DGKF FVDQR IL Y P
Sbjct 253 DMSSHCCLVAIGRLQVTSTAANDMSGS--NNQSEFITRHAMDGKFTFVDQRVLNILGYTP 310
Query 366 QELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMN 425
ELLG CY++FH +D H+ E QVL+ + ++ + Y+ + K+ ++ LR++ ++F+N
Sbjct 311 TELLGKICYDFFHPEDQSHMKESFDQVLKQKGQMFSLLYRARAKNSEYVWLRTQAYAFLN 370
Query 426 PWTKEVEYIVSTNT 439
P+T EVEYIV TN+
Sbjct 371 PYTDEVEYIVCTNS 384
>sp|Q9BE97|ARNT_BOVIN Aryl hydrocarbon receptor nuclear translocator
OS=Bos taurus OX=9913 GN=ARNT PE=1 SV=1
Length=790
Score = 341 bits (874), Expect = 5e-106, Method: Compositional matrix adjust.
Identities = 165/377 (44%), Positives = 243/377 (64%), Gaps = 10/377 (3%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
ARE HS+IE+RRR+KM ++I EL+ +VPTC+A++RK DKLT+LRMAV HMK+LRG N
Sbjct 90 ARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTS 149
Query 133 TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSL 192
T+ YKP+FL+D ELKHLIL AADGFLF+V C+ G++++VS+SV +LN Q++ G +L
Sbjct 150 TDGTYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGSTL 209
Query 193 FDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMK 252
+D +HP D+ K++EQLS+S+ A R++D KTG VK + R+C G+RRSF CRM+
Sbjct 210 YDQVHPDDVDKLREQLSTSENALTGRILDLKTGT-VKKEGQQSSMRMCMGSRRSFICRMR 268
Query 253 CNRPSVKVEDKDFPSTCSKK--------KADRKSFCTIHSTGYLKSWPPTKMGLDEDNEP 304
C SV + S + K F +H TGY+K+WPP + L +D+
Sbjct 269 CGNSSVDSVSMNRLSFVRNRCRNGLGSAKDGEPHFVVVHCTGYIKAWPPAGVSLPDDDPE 328
Query 305 DNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYL 364
+G CLVAIGRL P + + E++SRH I+G F FVD R A + Y
Sbjct 329 AGQGSKF-CLVAIGRLQVTSSPNCTDMSNVCQPTEFISRHNIEGIFTFVDHRCVATVGYQ 387
Query 365 PQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFM 424
PQELLG + E+ H +D L + +QV++ + ++ + ++F+ K+ ++ +R+ F+F
Sbjct 388 PQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKNREWLWVRTSSFTFQ 447
Query 425 NPWTKEVEYIVSTNTVV 441
NP++ E+EYI+ TNT V
Sbjct 448 NPYSDEIEYIICTNTNV 464
>sp|P27540|ARNT_HUMAN Aryl hydrocarbon receptor nuclear translocator
OS=Homo sapiens OX=9606 GN=ARNT PE=1 SV=1
Length=789
Score = 341 bits (874), Expect = 6e-106, Method: Compositional matrix adjust.
Identities = 166/377 (44%), Positives = 244/377 (65%), Gaps = 10/377 (3%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
ARE HS+IE+RRR+KM ++I EL+ +VPTC+A++RK DKLT+LRMAV HMK+LRG N
Sbjct 90 ARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTS 149
Query 133 TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSL 192
T+ +YKP+FL+D ELKHLIL AADGFLF+V C+ G++++VS+SV +LN Q++ G +L
Sbjct 150 TDGSYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGSTL 209
Query 193 FDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMK 252
+D +HP D+ K++EQLS+S+ A R++D KTG VK + R+C G+RRSF CRM+
Sbjct 210 YDQVHPDDVDKLREQLSTSENALTGRILDLKTGT-VKKEGQQSSMRMCMGSRRSFICRMR 268
Query 253 CNRPS---VKVEDKDFPSTCSKK-----KADRKSFCTIHSTGYLKSWPPTKMGLDEDNEP 304
C S V V F + K F +H TGY+K+WPP + L +D+
Sbjct 269 CGSSSVDPVSVNRLSFVRNRCRNGLGSVKDGEPHFVVVHCTGYIKAWPPAGVSLPDDDPE 328
Query 305 DNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYL 364
+G CLVAIGRL P + + E++SRH I+G F FVD R A + Y
Sbjct 329 AGQGSKF-CLVAIGRLQVTSSPNCTDMSNVCQPTEFISRHNIEGIFTFVDHRCVATVGYQ 387
Query 365 PQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFM 424
PQELLG + E+ H +D L + +QV++ + ++ + ++F+ K+ ++ +R+ F+F
Sbjct 388 PQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKNQEWLWMRTSSFTFQ 447
Query 425 NPWTKEVEYIVSTNTVV 441
NP++ E+EYI+ TNT V
Sbjct 448 NPYSDEIEYIICTNTNV 464
>sp|P53762|ARNT_MOUSE Aryl hydrocarbon receptor nuclear translocator
OS=Mus musculus OX=10090 GN=Arnt PE=1 SV=3
Length=791
Score = 340 bits (871), Expect = 2e-105, Method: Compositional matrix adjust.
Identities = 174/415 (42%), Positives = 258/415 (62%), Gaps = 26/415 (6%)
Query 35 CNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDE 94
CN K + + +D ++S DK+ RL ARE HS+IE+RRR+KM ++I E
Sbjct 68 CNDKERFARSDDEQS-SADKE----RL-----------ARENHSEIERRRRNKMTAYITE 111
Query 95 LASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRA 154
L+ +VPTC+A++RK DKLT+LRMAV HMK+LRG N T+ +YKP+FL+D ELKHLIL A
Sbjct 112 LSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSTDGSYKPSFLTDQELKHLILEA 171
Query 155 ADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTA 214
ADGFLF+V C+ G++++VS+SV +LN Q++ G +L+D +HP D+ K++EQLS+S+ A
Sbjct 172 ADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVDKLREQLSTSENA 231
Query 215 PRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKK-- 272
R++D KTG VK + R+C G+RRSF CRM+C SV + S +
Sbjct 232 LTGRVLDLKTGT-VKKEGQQSSMRMCMGSRRSFICRMRCGTSSVDPVSMNRLSFLRNRCR 290
Query 273 ------KADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVP 326
K F +H TGY+K+WPP + L +D+ +G CLVAIGRL P
Sbjct 291 NGLGSVKEGEPHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKF-CLVAIGRLQVTSSP 349
Query 327 QPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLA 386
+ + E++SRH I+G F FVD R A + Y PQELLG + E+ H +D L
Sbjct 350 NCTDMSNICQPTEFISRHNIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLR 409
Query 387 ECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 441
+ +QV++ + ++ + ++F+ K ++ +R+ F+F NP++ E+EYI+ TNT V
Sbjct 410 DSFQQVVKLKGQVLSVMFRFRSKTREWLWMRTSSFTFQNPYSDEIEYIICTNTNV 464
>sp|O02748|ARNT_RABIT Aryl hydrocarbon receptor nuclear translocator
OS=Oryctolagus cuniculus OX=9986 GN=ARNT PE=2 SV=1
Length=790
Score = 339 bits (870), Expect = 2e-105, Method: Compositional matrix adjust.
Identities = 165/377 (44%), Positives = 243/377 (64%), Gaps = 10/377 (3%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
ARE HS+IE+RRR+KM ++I EL+ +VPTC+A++RK DKLT+LRMAV HMK+LRG N
Sbjct 90 ARENHSEIERRRRNKMTAYITELSDIVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTS 149
Query 133 TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSL 192
T+ +YKP+FL+D ELKHLIL AADGFLF+V C+ G++++VS+SV +LN Q++ G +L
Sbjct 150 TDGSYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGSTL 209
Query 193 FDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMK 252
+D +HP D+ K++EQLS+S+ A R++D KTG VK + R+C G+RRSF CRM+
Sbjct 210 YDQVHPDDVDKLREQLSTSENALTGRILDLKTGT-VKKEGQQSSMRMCMGSRRSFICRMR 268
Query 253 CNRPSVKVEDKDFPSTCSKK--------KADRKSFCTIHSTGYLKSWPPTKMGLDEDNEP 304
C SV + S + K F +H TGY+K+WPP + L +D+
Sbjct 269 CGNSSVDPVSMNRLSFVRNRCRNGLGSVKDGEPHFVVVHCTGYIKAWPPAGVSLPDDDPE 328
Query 305 DNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYL 364
+G CLVAIGRL P + + E++SRH I+G F FVD R A + Y
Sbjct 329 AGQGSKF-CLVAIGRLQVTSSPNCTDMSNVCQPTEFISRHNIEGIFTFVDHRCVATVGYQ 387
Query 365 PQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFM 424
PQELLG + E+ H +D L + +QV++ + ++ + ++F+ K+ ++ R+ F+F
Sbjct 388 PQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKNREWLWTRTSSFTFQ 447
Query 425 NPWTKEVEYIVSTNTVV 441
NP++ E+EYI+ TNT V
Sbjct 448 NPYSDEIEYIICTNTNV 464
>sp|Q9DG12|ARNT2_DANRE Aryl hydrocarbon receptor nuclear translocator
2 OS=Danio rerio OX=7955 GN=arnt2 PE=1 SV=2
Length=737
Score = 338 bits (866), Expect = 3e-105, Method: Compositional matrix adjust.
Identities = 178/444 (40%), Positives = 270/444 (61%), Gaps = 27/444 (6%)
Query 18 PGPTDLLSSSLGTSGVDCNRKRKGSSTDYQES-MDTDKDDPHGRLEYTEHQG------RI 70
PGP + + +G V G + + MD D +D G +++ + +
Sbjct 17 PGPVSMPGAVVGAGQVRMTGAMPGRGGKRRSAGMDFDDEDGEGPSKFSRYDDDQIPGDKE 76
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
+ ARE HS+IE+RRR+KM +I EL+ +VPTC+A++RK DKLT+LRMAV HMK++RG N
Sbjct 77 RYARENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTGN 136
Query 131 PYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQ 190
T+ YKP+FL++ ELKHLIL AADGFLFVV + G++++VS+SV +LN+ Q++ G
Sbjct 137 TSTDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNHPQSEWFGS 196
Query 191 SLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCR 250
+LF+ +HP D+ K++EQLS+S+ + R++D KTG VK + R+C G+RRSF CR
Sbjct 197 TLFEQVHPDDVDKLREQLSTSENSMTGRILDLKTGT-VKKEGQQSSMRMCMGSRRSFICR 255
Query 251 MKC----------NRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGL-D 299
M+C NR S K + + K + +H TGY+K+WPP M + D
Sbjct 256 MRCGSAPLDHISLNRLSSM--RKRYRNGLGPSKEGEAQYSVVHCTGYIKAWPPAGMTIPD 313
Query 300 EDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSM--EYVSRHAIDGKFVFVDQRA 357
ED E + CLVAIGRL V PV+ ++ S+ E++SRH DG FVD R
Sbjct 314 EDTEAGQ--TSKYCLVAIGRL--QVTSSPVSMDMNGLSVPTEFLSRHNSDGIITFVDPRC 369
Query 358 TAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLR 417
++ Y PQ+LLG E+ H +D HL E +QV++ + ++ + Y+F++K+ ++ +R
Sbjct 370 INVIGYQPQDLLGKDILEFCHPEDQSHLRESFQQVVKLKGQVLSVMYRFRMKNREWMLIR 429
Query 418 SRWFSFMNPWTKEVEYIVSTNTVV 441
+ F+F NP++ E+EYI+ TNT V
Sbjct 430 TSSFTFQNPYSDEIEYIICTNTNV 453
>sp|Q9HBZ2|ARNT2_HUMAN Aryl hydrocarbon receptor nuclear translocator
2 OS=Homo sapiens OX=9606 GN=ARNT2 PE=1 SV=2
Length=717
Score = 333 bits (853), Expect = 1e-103, Method: Compositional matrix adjust.
Identities = 167/402 (42%), Positives = 252/402 (63%), Gaps = 23/402 (6%)
Query 50 MDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKL 109
MD D +D G +++ RE HS+IE+RRR+KM +I EL+ +VPTC+A++RK
Sbjct 50 MDFDDEDGEGPSKFS---------RENHSEIERRRRNKMTQYITELSDMVPTCSALARKP 100
Query 110 DKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKI 169
DKLT+LRMAV HMK++RG N T+ YKP+FL++ ELKHLIL AADGFLFVV + G++
Sbjct 101 DKLTILRMAVSHMKSMRGTGNKSTDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRV 160
Query 170 LFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVK 229
++VS+SV +LN Q++ G +L++ +HP D+ K++EQL +S+ + R++D KTG VK
Sbjct 161 IYVSDSVTPVLNQPQSEWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGT-VK 219
Query 230 TDITPGPSRLCSGARRSFFCRMKC-NRP-------SVKVEDKDFPSTCSKKKADRKSFCT 281
+ R+C G+RRSF CRM+C N P + K F + K +
Sbjct 220 KEGQQSSMRMCMGSRRSFICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAV 279
Query 282 IHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSM--E 339
+H TGY+K+WPP M + E++ +G CLVAIGRL V PV ++ S+ E
Sbjct 280 VHCTGYIKAWPPAGMTIPEEDADVGQGSKY-CLVAIGRL--QVTSSPVCMDMNGMSVPTE 336
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKI 399
++SRH DG FVD R +++ Y PQ+LLG E+ H +D HL E +QV++ + ++
Sbjct 337 FLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSHLRESFQQVVKLKGQV 396
Query 400 TTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 441
+ Y+F+ K+ ++ +R+ F+F NP++ E+EYI+ TNT V
Sbjct 397 LSVMYRFRTKNREWMLIRTSSFTFQNPYSDEIEYIICTNTNV 438
>sp|Q78E60|ARNT2_RAT Aryl hydrocarbon receptor nuclear translocator
2 OS=Rattus norvegicus OX=10116 GN=Arnt2 PE=2 SV=1
Length=712
Score = 331 bits (849), Expect = 4e-103, Method: Compositional matrix adjust.
Identities = 163/385 (42%), Positives = 247/385 (64%), Gaps = 14/385 (4%)
Query 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
+G K +RE HS+IE+RRR+KM +I EL+ +VPTC+A++RK DKLT+LRMAV HMK++R
Sbjct 58 EGPSKFSRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMR 117
Query 127 GATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQND 186
G N T+ YKP+FL++ ELKHLIL AADGFLFVV + G++++VS+SV +LN Q++
Sbjct 118 GTGNKSTDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSE 177
Query 187 LIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRS 246
G +L++ +HP D+ K++EQL +S+ + R++D KTG VK + R+C G+RRS
Sbjct 178 WFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGT-VKKEGQQSSMRMCMGSRRS 236
Query 247 FFCRMKC-NRP-------SVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGL 298
F CRM+C N P + K F + K + +H TGY+K+WPP M +
Sbjct 237 FICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGYIKAWPPAGMSI 296
Query 299 DEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSM--EYVSRHAIDGKFVFVDQR 356
E++ +G CLVAIGRL V PV ++ S+ E++SRH DG FVD R
Sbjct 297 PEEDADVGQGSKY-CLVAIGRL--QVTSSPVCMDMSGMSVPTEFLSRHNSDGIITFVDPR 353
Query 357 ATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITL 416
+++ Y PQ+LLG E+ H +D HL E +QV++ + ++ + Y+F+ K+ ++ +
Sbjct 354 CISVIGYQPQDLLGKDILEFCHPEDQSHLRESFQQVVKLKGQVLSVMYRFRTKNREWLLI 413
Query 417 RSRWFSFMNPWTKEVEYIVSTNTVV 441
R+ F+F NP++ E+EY++ TNT V
Sbjct 414 RTSSFTFQNPYSDEIEYVICTNTNV 438
>sp|P41739|ARNT_RAT Aryl hydrocarbon receptor nuclear translocator
OS=Rattus norvegicus OX=10116 GN=Arnt PE=1 SV=2
Length=800
Score = 333 bits (855), Expect = 4e-103, Method: Compositional matrix adjust.
Identities = 171/415 (41%), Positives = 256/415 (62%), Gaps = 26/415 (6%)
Query 35 CNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDE 94
CN K + + +D ++S DK+ RL ARE HS+IE+RRR+KM ++I E
Sbjct 68 CNDKERFARSDDEQS-SADKE----RL-----------ARENHSEIERRRRNKMTAYITE 111
Query 95 LASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRA 154
L+ +VPTC+A++RK DKLT+LRMAV HMK+LRG N T+ +YKP+FL+D ELKHLIL A
Sbjct 112 LSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSTDGSYKPSFLTDQELKHLILEA 171
Query 155 ADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTA 214
ADGFLF+V C+ G++++VS+SV +LN Q++ G +L+D +HP D+ K++EQLS+S+ A
Sbjct 172 ADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVDKLREQLSTSENA 231
Query 215 PRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKK-- 272
R++D KTG VK + R+C G+RRSF CRM+C SV + S +
Sbjct 232 LTGRILDLKTGT-VKKEGQQSSMRMCMGSRRSFICRMRCGTSSVDPVSMNRLSFLRNRCR 290
Query 273 ------KADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVP 326
K F +H TGY+K+WPP + L +D+ +G CLVAIGRL P
Sbjct 291 NGLGSVKEGEPHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKF-CLVAIGRLQVTSSP 349
Query 327 QPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLA 386
+ + E++SRH I+G F FVD R A + Y PQELLG + E+ H +D L
Sbjct 350 NCTDMSNICQPTEFISRHNIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLR 409
Query 387 ECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 441
+ +QV++ + ++ + ++F+ K+ ++ +R+ F+F NP++ E+ + TNT V
Sbjct 410 DSFQQVVKLKGQVLSVMFRFRAKNREWLWMRTSSFTFQNPYSDEMSIFICTNTNV 464
>sp|Q61324|ARNT2_MOUSE Aryl hydrocarbon receptor nuclear translocator
2 OS=Mus musculus OX=10090 GN=Arnt2 PE=1 SV=2
Length=712
Score = 331 bits (849), Expect = 4e-103, Method: Compositional matrix adjust.
Identities = 166/402 (41%), Positives = 252/402 (63%), Gaps = 23/402 (6%)
Query 50 MDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKL 109
MD D +D G +++ RE HS+IE+RRR+KM +I EL+ +VPTC+A++RK
Sbjct 50 MDFDDEDGEGPSKFS---------RENHSEIERRRRNKMTQYITELSDMVPTCSALARKP 100
Query 110 DKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKI 169
DKLT+LRMAV HMK++RG N T+ YKP+FL++ ELKHLIL AADGFLFVV + G++
Sbjct 101 DKLTILRMAVSHMKSMRGTGNKSTDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRV 160
Query 170 LFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVK 229
++VS+SV +LN Q++ G +L++ +HP D+ K++EQL +S+ + R++D KTG VK
Sbjct 161 IYVSDSVTPVLNQPQSEWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGT-VK 219
Query 230 TDITPGPSRLCSGARRSFFCRMKC-NRP-------SVKVEDKDFPSTCSKKKADRKSFCT 281
+ R+C G+RRSF CRM+C N P + K F + K +
Sbjct 220 KEGQQSSMRMCMGSRRSFICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAV 279
Query 282 IHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSM--E 339
+H TGY+K+WPP M + E++ +G CLVAIGRL V PV ++ S+ E
Sbjct 280 VHCTGYIKAWPPAGMTIPEEDADVGQGSKY-CLVAIGRL--QVTSSPVCMDMSGMSVPTE 336
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKI 399
++SRH DG FVD R +++ Y PQ+LLG E+ H +D HL E +QV++ + ++
Sbjct 337 FLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSHLRESFQQVVKLKGQV 396
Query 400 TTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 441
+ Y+F+ K+ ++ +R+ F+F NP++ E+EY++ TNT V
Sbjct 397 LSVMYRFRTKNREWLLIRTSSFTFQNPYSDEIEYVICTNTNV 438
>sp|P79832|ARNT_ONCMY Aryl hydrocarbon receptor nuclear translocator
OS=Oncorhynchus mykiss OX=8022 GN=arnt PE=1 SV=1
Length=723
Score = 330 bits (846), Expect = 1e-102, Method: Compositional matrix adjust.
Identities = 167/377 (44%), Positives = 243/377 (64%), Gaps = 10/377 (3%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
ARE HS+IE+RRR+KM ++I EL+ +VPTC+A++RK DKLT+LRMAV HMK+LRG+ N
Sbjct 66 ARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGSGNTA 125
Query 133 TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSL 192
+ YKP+FL+D ELKHLIL AADGFLFVV C+ G++++VS+S+ +LN SQ+D +G SL
Sbjct 126 ADGTYKPSFLTDQELKHLILEAADGFLFVVSCESGRVVYVSDSLTPVLNQSQSDWLGSSL 185
Query 193 FDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMK 252
+D LHP D K++EQLS++++ R++D KTG VK + R+C GARRSF CRM+
Sbjct 186 YDQLHPDDGDKLREQLSTAESNNTGRMLDLKTGT-VKKEGQQSSVRMCMGARRSFICRMR 244
Query 253 CNRPSVK---VEDKDFPSTCSKK-----KADRKSFCTIHSTGYLKSWPPTKMGLDEDNEP 304
C V+ + +F + ++ K + +H TGY+KSWPPT + L D E
Sbjct 245 CGSCPVEPMSMNRLNFLRSRNRNGLGPPKDGEPQYVVVHCTGYIKSWPPTGVNL-TDEEA 303
Query 305 DNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYL 364
DN + CLVAIGRL P + +E++SRH G F FVD R A + Y
Sbjct 304 DNILGSRYCLVAIGRLQVTSCPSDTDMNSISVPVEFISRHNCQGLFTFVDHRCMATVGYQ 363
Query 365 PQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFM 424
PQELLG + E H +D L + +QV++ + ++ + ++F K ++ +R+ F+F
Sbjct 364 PQELLGKNILELAHPEDQELLRDSFQQVVKLKGQVLSVMFRFLSKTRDWLWIRTSSFTFQ 423
Query 425 NPWTKEVEYIVSTNTVV 441
NP+++E+EYI+ TN V
Sbjct 424 NPFSEEIEYIICTNANV 440
>sp|O02219|AHA1_CAEEL Aryl hydrocarbon receptor nuclear translocator
homolog OS=Caenorhabditis elegans OX=6239 GN=aha-1 PE=1
SV=1
Length=453
Score = 221 bits (563), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 230/409 (56%), Gaps = 36/409 (9%)
Query 58 HGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRM 117
+ R+E + + + ARE HS+IE+RRR+KM +I+ELA +VP C ++ RK DKLT+LRM
Sbjct 30 YARMEDEMGENKERFARENHSEIERRRRNKMTHYINELAEMVPQCASLGRKPDKLTILRM 89
Query 118 AVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVF 177
AV HMK +RG T E +YKP+FL+D ELKHLIL AA+GFLFVV C GK+L+V++S+
Sbjct 90 AVSHMKGIRGHT-AQDETSYKPSFLTDQELKHLILEAANGFLFVVCCQTGKVLYVADSIT 148
Query 178 KILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPS 237
+LN Q D + ++L + +HP D K+++QL S+ + +++D K+G VK + +
Sbjct 149 PVLNLKQEDWLQRNLNELIHPDDQDKIRDQLCGSEVSV-NKVLDLKSG-SVKRE--GAST 204
Query 238 RLCSGARRSFFCRMKCN--RPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTK 295
R+ RR F CRM+ P ++ ++ + +++ +H TGY+K+ PP
Sbjct 205 RVHMSCRRGFICRMRVGALEPLHRLRNRR-----PLFQHAGQNYVVMHCTGYIKNAPPQG 259
Query 296 MGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQ 355
+ N P + SCLVAI RL V PV + + ++ R + DGK F+D
Sbjct 260 I-----NAPAS-----SCLVAIARL--QVASMPVCAD-PTSTNQFSVRVSEDGKMTFIDA 306
Query 356 RATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGS-FI 414
R + ++ +L+G + H D L + +L + + + N +++ + +I
Sbjct 307 RVSDLIGLSSDQLIGRYWWNLAHPADEKTLQDSFVALL-SDQPMRIN---IRVRTSTDYI 362
Query 415 TLRSRWFSFMNPWTKEVEYIVSTNTVV----LANVLEGGDPTFPQLTAS 459
+ FMNP++++ EY+V+T+ + + N + PT PQ AS
Sbjct 363 PCTVSAYKFMNPYSEQFEYVVATHQIAPQEDINNWVTA--PTVPQPQAS 409
>sp|O08785|CLOCK_MOUSE Circadian locomoter output cycles protein
kaput OS=Mus musculus OX=10090 GN=Clock PE=1 SV=1
Length=855
Score = 168 bits (425), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/397 (32%), Positives = 207/397 (52%), Gaps = 43/397 (11%)
Query 53 DKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 112
D+DD E + K R + ++ EK+RRD+ N I EL S++P +RK+DK
Sbjct 15 DRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSMLP---GNARKMDKS 71
Query 113 TVLRMAV----QHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGK 168
TVL+ ++ +H +T + ++KPTFLS++E L+L A DGF + D G
Sbjct 72 TVLQKSIDFLRKHKETTAQSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTD-GS 130
Query 169 ILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPV 228
I++VSESV +L + +DL+ QS+F+++ + ++V + LS+ L+++ +
Sbjct 131 IIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILST-------HLLESDSL--- 180
Query 229 KTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKK--ADRKSFCTIHSTG 286
P L S + F C M R ++ D PST + + KS ++ ST
Sbjct 181 ------TPEYLKSKNQLEFCCHML--RGTI---DPKEPSTYEYVRFIGNFKSLTSV-STS 228
Query 287 YLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVK--SMEYVSRH 344
+ T + + P E + C VA RL PQ + V+ + E+ SRH
Sbjct 229 THNGFEGT---IQRTHRPSYE--DRVCFVATVRL---ATPQFIKEMCTVEEPNEEFTSRH 280
Query 345 AIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCY 404
+++ KF+F+D RA I+ YLP E+LGTS Y+Y+H DD+ +LA+CH ++Q K + Y
Sbjct 281 SLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQ-YGKGKSCYY 339
Query 405 KFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 441
+F K +I L++ ++ + W E+IV T+TVV
Sbjct 340 RFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 376
>sp|Q5RAK8|CLOCK_PONAB Circadian locomoter output cycles protein
kaput OS=Pongo abelii OX=9601 GN=CLOCK PE=2 SV=1
Length=846
Score = 167 bits (423), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/397 (31%), Positives = 207/397 (52%), Gaps = 43/397 (11%)
Query 53 DKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 112
D+DD E + K R + ++ EK+RRD+ N I EL S++P +RK+DK
Sbjct 15 DRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSMLP---GNARKMDKS 71
Query 113 TVLRMAVQHMKTLRGATNPY----TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGK 168
TVL+ ++ ++ + T ++KPTFLS++E L+L A DGF + D G
Sbjct 72 TVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTD-GS 130
Query 169 ILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPV 228
I++VSESV +L + +DL+ QS+F+++ + ++V + LS+ L+++ +
Sbjct 131 IIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILST-------HLLESDSL--- 180
Query 229 KTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKK--ADRKSFCTIHSTG 286
P L S + F C M R ++ D PST K + KS ++ S+
Sbjct 181 ------TPEYLKSKNQLEFCCHML--RGTI---DPKEPSTYEYVKFIGNFKSLNSVSSSA 229
Query 287 YLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVK--SMEYVSRH 344
+ + T + + P E + C VA RL PQ + V+ + E+ SRH
Sbjct 230 H-NGFEGT---IQRTHRPSYE--DRVCFVATVRL---ATPQFIKEMCTVEEPNEEFASRH 280
Query 345 AIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCY 404
+++ KF+F+D RA I+ YLP E+LGTS Y+Y+H DD+ +LA+CH ++Q K + Y
Sbjct 281 SLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQ-YGKGKSCYY 339
Query 405 KFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 441
+F K +I L++ ++ + W E+IV T+TVV
Sbjct 340 RFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 376
>sp|O15516|CLOCK_HUMAN Circadian locomoter output cycles protein
kaput OS=Homo sapiens OX=9606 GN=CLOCK PE=1 SV=1
Length=846
Score = 167 bits (423), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/397 (31%), Positives = 207/397 (52%), Gaps = 43/397 (11%)
Query 53 DKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 112
D+DD E + K R + ++ EK+RRD+ N I EL S++P +RK+DK
Sbjct 15 DRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSMLP---GNARKMDKS 71
Query 113 TVLRMAVQHMKTLRGATNPY----TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGK 168
TVL+ ++ ++ + T ++KPTFLS++E L+L A DGF + D G
Sbjct 72 TVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTD-GS 130
Query 169 ILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPV 228
I++VSESV +L + +DL+ QS+F+++ + ++V + LS+ L+++ +
Sbjct 131 IIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILST-------HLLESDSL--- 180
Query 229 KTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKK--ADRKSFCTIHSTG 286
P L S + F C M R ++ D PST K + KS ++ S+
Sbjct 181 ------TPEYLKSKNQLEFCCHML--RGTI---DPKEPSTYEYVKFIGNFKSLNSVSSSA 229
Query 287 YLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVK--SMEYVSRH 344
+ + T + + P E + C VA RL PQ + V+ + E+ SRH
Sbjct 230 H-NGFEGT---IQRTHRPSYE--DRVCFVATVRL---ATPQFIKEMCTVEEPNEEFTSRH 280
Query 345 AIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCY 404
+++ KF+F+D RA I+ YLP E+LGTS Y+Y+H DD+ +LA+CH ++Q K + Y
Sbjct 281 SLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQ-YGKGKSCYY 339
Query 405 KFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 441
+F K +I L++ ++ + W E+IV T+TVV
Sbjct 340 RFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 376
>sp|Q91YB0|CLOCK_NANGA Circadian locomoter output cycles protein
kaput OS=Nannospalax galili OX=1026970 GN=Clock PE=1 SV=1
Length=865
Score = 165 bits (417), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 207/397 (52%), Gaps = 43/397 (11%)
Query 53 DKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 112
D+DD E + K R + ++ EK+RRD+ N I EL S++P +RK+DK
Sbjct 15 DRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSMLP---GNARKMDKS 71
Query 113 TVLRMAVQHMKTLRGATNPY----TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGK 168
TVL+ ++ ++ + T ++KPTFLS++E L+L A DGF + D G
Sbjct 72 TVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTD-GS 130
Query 169 ILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPV 228
I++VSESV +L + +DL+ QS+F+++ + ++V + LS+ L+++ +
Sbjct 131 IIYVSESVTSLLEHLPSDLVDQSVFNFIPEGEHSEVYKILST-------HLLESDSL--- 180
Query 229 KTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKK--ADRKSFCTIHSTG 286
P L S + F C M R +V D PST + + KS ++ ++
Sbjct 181 ------TPEYLKSKNQLEFCCHML--RGTV---DPKEPSTYEYVRFIGNFKSLNSVPTSA 229
Query 287 YLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVK--SMEYVSRH 344
+ + T + + P E + C VA RL PQ + V+ + E+ SRH
Sbjct 230 H-NGFEGT---IQRTHRPSYE--DRVCFVATVRL---ATPQFIKEMCTVEEPNEEFTSRH 280
Query 345 AIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCY 404
+++ KF+F+D RA I+ YLP E+LGTS Y+Y+H DD+ +LA+CH ++Q K + Y
Sbjct 281 SLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQ-YGKGKSCYY 339
Query 405 KFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 441
+F K +I L++ ++ + W E+IV T+TVV
Sbjct 340 RFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 376
>sp|Q91YB2|CLOCK_SPACA Circadian locomoter output cycles protein
kaput OS=Spalax carmeli OX=164324 GN=Clock PE=2 SV=1
Length=865
Score = 164 bits (416), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/397 (31%), Positives = 207/397 (52%), Gaps = 43/397 (11%)
Query 53 DKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 112
D+DD E + K R + ++ EK+RRD+ N I EL S++P +RK+DK
Sbjct 15 DRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSMLP---GNARKMDKS 71
Query 113 TVLRMAVQHMKTLRGATNPY----TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGK 168
TVL+ ++ ++ + T ++KPTFLS++E L+L A DGF + D G
Sbjct 72 TVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTD-GS 130
Query 169 ILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPV 228
I++VSESV +L + +DL+ QS+F+++ + ++V + LS+ L+++ +
Sbjct 131 IIYVSESVTSLLEHLPSDLVDQSVFNFIPEGEHSEVYKILST-------HLLESDSL--- 180
Query 229 KTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKK--ADRKSFCTIHSTG 286
P L S + F C M R ++ D PST + + KS ++ ++
Sbjct 181 ------TPEYLKSKNQLEFCCHML--RGTI---DPKEPSTYEYVRFIGNFKSLNSVPTSA 229
Query 287 YLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVK--SMEYVSRH 344
+ + T + + P E + C VA RL PQ + V+ + E+ SRH
Sbjct 230 H-NGFEGT---IQRTHRPSYE--DRVCFVATVRL---ATPQFIKEMCTVEEPNEEFTSRH 280
Query 345 AIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCY 404
+++ KF+F+D RA I+ YLP E+LGTS Y+Y+H DD+ +LA+CH ++Q K + Y
Sbjct 281 SLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQ-YGKGKSCYY 339
Query 405 KFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 441
+F K +I L++ ++ + W E+IV T+TVV
Sbjct 340 RFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 376
>sp|Q9WVS9|CLOCK_RAT Circadian locomoter output cycles protein
kaput OS=Rattus norvegicus OX=10116 GN=Clock PE=2 SV=1
Length=862
Score = 164 bits (415), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 205/397 (52%), Gaps = 43/397 (11%)
Query 53 DKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 112
D+DD E + K R + ++ EK+RRD+ N I EL S++P +RK+DK
Sbjct 15 DRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSMLP---GNARKMDKS 71
Query 113 TVLRMAVQHMKTLRGATNPY----TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGK 168
TVL+ ++ ++ + T ++KPTFLS++E L+L A DGF + D G
Sbjct 72 TVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTD-GS 130
Query 169 ILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPV 228
I++VSE+V +L + +DL+ QS+F+++ + ++V + LS+ L+++ +
Sbjct 131 IIYVSETVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILST-------HLLESDSL--- 180
Query 229 KTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKK--ADRKSFCTIHSTG 286
P L S + F C M R ++ D PST + + KS ++ ST
Sbjct 181 ------TPEDLKSKNQLEFCCHML--RGTI---DPKEPSTYEYVRFIGNFKSLNSV-STS 228
Query 287 YLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVK--SMEYVSRH 344
+ T + + P E + C VA RL PQ + V+ + E+ SRH
Sbjct 229 THNGFEGT---IQRTHRPSYE--DRVCFVATVRL---ATPQFIKEMCTVEEPNEEFTSRH 280
Query 345 AIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCY 404
+++ KF+F+D RA I+ YLP E+LGTS Y+Y+H DD+ LA+CH ++Q K + Y
Sbjct 281 SLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLESLAKCHEHLMQ-YGKGKSCYY 339
Query 405 KFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 441
+F K +I L++ ++ + W E+IV T+TVV
Sbjct 340 RFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 376
>sp|Q99743|NPAS2_HUMAN Neuronal PAS domain-containing protein
2 OS=Homo sapiens OX=9606 GN=NPAS2 PE=1 SV=3
Length=824
Score = 163 bits (412), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 198/387 (51%), Gaps = 59/387 (15%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
+ R + ++ EK+RRD+ N I EL+S++P +RK+DK TVL + ++ +
Sbjct 8 RAKRASRNKSEKKRRDQFNVLIKELSSMLP---GNTRKMDKTTVLEKVIGFLQK-HNEVS 63
Query 131 PYTE-----ANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQN 185
TE ++KP+FLS++E L+L A DGF+ V D G I++VS+S+ +L + +
Sbjct 64 AQTEICDIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTTD-GSIIYVSDSITPLLGHLPS 122
Query 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
D++ Q+L ++L ++ ++V + LSS + TD +P P L S +
Sbjct 123 DVMDQNLLNFLPEQEHSEVYKILSSHM---------------LVTD-SPSPEYLKSDSDL 166
Query 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSW----PPTKMGLDED 301
F+C + + K+FP+ + I G +S+ P+ G D
Sbjct 167 EFYCHLLRG----SLNPKEFPT-----------YEYIKFVGNFRSYNNVPSPSCNGFDNT 211
Query 302 NEPDNEGCNLS-----CLVAIGRLHSHVVPQPVNGEIRVKS--MEYVSRHAIDGKFVFVD 354
+ C + C +A RL PQ + V E+ SRH+++ KF+F+D
Sbjct 212 L---SRPCRVPLGKEVCFIATVRL---ATPQFLKEMCIVDEPLEEFTSRHSLEWKFLFLD 265
Query 355 QRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFI 414
RA I+ YLP E+LGTS Y+Y+H DD+ LA CH+ ++Q K + CY+F K +I
Sbjct 266 HRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQF-GKGKSCCYRFLTKGQQWI 324
Query 415 TLRSRWFSFMNPWTKEVEYIVSTNTVV 441
L++ ++ + W + E+IV T++VV
Sbjct 325 WLQTHYYITYHQWNSKPEFIVCTHSVV 351
>sp|P97460|NPAS2_MOUSE Neuronal PAS domain-containing protein
2 OS=Mus musculus OX=10090 GN=Npas2 PE=1 SV=1
Length=816
Score = 160 bits (406), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/388 (31%), Positives = 199/388 (51%), Gaps = 61/388 (16%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
+ R + ++ EK+RRD+ N I EL+S++P +RK+DK TVL + ++ +
Sbjct 8 RAKRASRNKSEKKRRDQFNVLIKELSSMLP---GNTRKMDKTTVLEKVIGFLQK-HNEVS 63
Query 131 PYTE-----ANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQN 185
TE ++KP+FLS++E L+L A DGF+ VV D G I++VS+S+ +L +
Sbjct 64 AQTEICDIQQDWKPSFLSNEEFTQLMLEALDGFVIVVTTD-GSIIYVSDSITPLLGHLPA 122
Query 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
D++ Q+L ++L ++ ++V + LSS + TD +P P L S
Sbjct 123 DVMDQNLLNFLPEQEHSEVYKILSSHM---------------LVTD-SPSPEFLKSDNDL 166
Query 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSW----PPTKMGLDED 301
F+C + + K+FP+ + I G +S+ P+ G D
Sbjct 167 EFYCHLLRG----SLNPKEFPT-----------YEYIKFVGNFRSYNNVPSPSCNGFDNT 211
Query 302 NEPDNEGCNLS-----CLVAIGRLHSHVVPQPVNGEIRVKSM---EYVSRHAIDGKFVFV 353
+ C++ C +A RL PQ + E+ V E+ SRH+++ KF+F+
Sbjct 212 L---SRPCHVPLGKDVCFIATVRL---ATPQFLK-EMCVADEPLEEFTSRHSLEWKFLFL 264
Query 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 413
D RA I+ YLP E+LGTS Y Y+H DD+ LA CH+ ++Q K + CY+F K +
Sbjct 265 DHRAPPIIGYLPFEVLGTSGYNYYHIDDLELLARCHQHLMQFG-KGKSCCYRFLTKGQQW 323
Query 414 ITLRSRWFSFMNPWTKEVEYIVSTNTVV 441
I L++ ++ + W + E+IV T++VV
Sbjct 324 IWLQTHYYITYHQWNSKPEFIVCTHSVV 351
>sp|Q91YA8|CLOCK_SPAJD Circadian locomoter output cycles protein
kaput OS=Spalax judaei OX=134510 GN=Clock PE=2 SV=1
Length=865
Score = 160 bits (405), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/400 (31%), Positives = 205/400 (51%), Gaps = 49/400 (12%)
Query 53 DKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 112
D+DD E + K R + ++ EK+RRD+ N I EL S++P +R++DK
Sbjct 15 DRDDSSIFDGLVEEDDKNKAKRVSRNKSEKKRRDQFNVLIKELGSMLP---GNAREMDKS 71
Query 113 TVLRMAVQHMKTLRGATNPY----TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGK 168
TVL+ ++ ++ + T ++KPTFLS++E L+L A DGF + D G
Sbjct 72 TVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTD-GS 130
Query 169 ILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPV 228
I++VSESV +L + +DL+ QS+F+++ + ++V + LS+ L+++ +
Sbjct 131 IIYVSESVTSLLEHLPSDLVDQSVFNFIPEGEHSEVYKILST-------HLLESDSL--- 180
Query 229 KTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKK--ADRKSFCTIHST- 285
P L S + F C M R ++ D PST + + KS ++ ++
Sbjct 181 ------TPEYLKSKNQLEFCCHML--RGTI---DPKEPSTYEYMRFIGNFKSLNSVPTSA 229
Query 286 --GYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVK--SMEYV 341
G+ + T ED C VA RL PQ + V+ + E+
Sbjct 230 HNGFEGTIQRTHRLSYEDR---------VCSVATVRL---ATPQFIKEMCTVEEPNEEFT 277
Query 342 SRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITT 401
SRH+++ KF+F+D RA I+ YLP E+LGTS Y+Y+H DD+ +LA+CH ++Q K +
Sbjct 278 SRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQ-YGKGKS 336
Query 402 NCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 441
Y+F K +I L++ ++ + W E+IV T+TVV
Sbjct 337 CYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 376
>sp|Q6YGZ4|CLOCK_TYTAL Circadian locomoter output cycles protein
kaput OS=Tyto alba OX=56313 GN=CLOCK PE=2 SV=1
Length=851
Score = 159 bits (402), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/384 (31%), Positives = 191/384 (50%), Gaps = 53/384 (14%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
K R + ++ EK+RRD+ N I EL S++P +RK+DK TVL+ ++ ++ + T
Sbjct 33 KAKRVSRNKSEKKRRDQFNVLIKELGSMLP---GNARKMDKSTVLQKSIDFLRKHKEITA 89
Query 131 P----YTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQND 186
++KPTFLS++E L+L A DGF + D G I++VSES+ +L + +D
Sbjct 90 QSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTD-GNIIYVSESITPLLEHLPSD 148
Query 187 LIGQSLFDYLHPKDIAKVKEQLSS----SDTAPRERLIDAKTGLPVKTDITPG---PSRL 239
L+ QS+F+++ + +++ + LSS SD+ E L +K L + G P
Sbjct 149 LVDQSVFNFIPEGEHSEIYKILSSHLLESDSLTPEYL-KSKNQLEFCCHMLRGTIDPKEQ 207
Query 240 CSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLD 299
+ F KC F T +++ R S+
Sbjct 208 PTYEYVKFIGNFKCLNNVPNSAHNGFEGTI--QRSHRPSY-------------------- 245
Query 300 EDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVK--SMEYVSRHAIDGKFVFVDQRA 357
ED C VA RL PQ + V+ + E+ SRH+++ KF+F+D RA
Sbjct 246 EDK---------VCFVATVRL---ATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRA 293
Query 358 TAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLR 417
I+ YLP E+LGTS Y+Y+H DD+ +LA+CH ++Q K + Y+F K +I L+
Sbjct 294 PPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHEHLMQ-YGKGKSCYYRFLTKGQQWIWLQ 352
Query 418 SRWFSFMNPWTKEVEYIVSTNTVV 441
+ ++ + W E+IV T+TVV
Sbjct 353 THYYITYHQWNSRPEFIVCTHTVV 376
>sp|Q8QGQ6|CLOCK_CHICK Circadian locomoter output cycles protein
kaput OS=Gallus gallus OX=9031 GN=CLOCK PE=1 SV=2
Length=875
Score = 159 bits (402), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/384 (31%), Positives = 191/384 (50%), Gaps = 53/384 (14%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
K R + ++ EK+RRD+ N I EL S++P +RK+DK TVL+ ++ ++ + T
Sbjct 33 KAKRVSRNKSEKKRRDQFNVLIKELGSMLP---GNARKMDKSTVLQKSIDFLRKHKEITA 89
Query 131 PY----TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQND 186
++KPTFLS++E L+L A DGF + D G I++VSESV +L + +D
Sbjct 90 QSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTD-GNIIYVSESVTPLLEHLPSD 148
Query 187 LIGQSLFDYLHPKDIAKVKEQLSS----SDTAPRERLIDAKTGLPVKTDITPG---PSRL 239
L+ QS+F+++ + +++ + LSS SD+ E L +K L + G P
Sbjct 149 LVDQSVFNFIPEGEHSEIYKILSSHLLESDSLTPEYL-KSKNQLEFCCHMLRGTIDPKEQ 207
Query 240 CSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLD 299
+ F KC F T +++ R S+
Sbjct 208 PTYEYVKFIGNFKCLNNVPNSAHNGFEGTI--QRSHRPSY-------------------- 245
Query 300 EDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVK--SMEYVSRHAIDGKFVFVDQRA 357
ED C +A RL PQ + V+ + E+ SRH+++ KF+F+D RA
Sbjct 246 EDK---------VCFIATVRL---ATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRA 293
Query 358 TAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLR 417
I+ YLP E+LGTS Y+Y+H DD+ +LA+CH ++Q K + Y+F K +I L+
Sbjct 294 PPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHEHLMQ-YGKGKSCYYRFLTKGQQWIWLQ 352
Query 418 SRWFSFMNPWTKEVEYIVSTNTVV 441
+ ++ + W E+IV T+TVV
Sbjct 353 THYYITYHQWNSRPEFIVCTHTVV 376
>sp|Q5ZQU2|NPAS2_CHICK Neuronal PAS domain-containing protein
2 OS=Gallus gallus OX=9031 GN=NPAS2 PE=1 SV=1
Length=815
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 192/383 (50%), Gaps = 51/383 (13%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV----QHMKTLR 126
+ R + ++ EK+RRD+ N I EL+S++P +RK+DK TVL + +H +
Sbjct 8 RAKRASRNKSEKKRRDQFNVLIKELSSMLP---GNTRKMDKTTVLEKVIGFLQKHNEVSA 64
Query 127 GATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQND 186
+ ++KP+FLS++E L+L A DGF+ V G I++VS+S+ +L + D
Sbjct 65 QTEISEIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTTG-GSIIYVSDSITPLLGHLPCD 123
Query 187 LIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRS 246
++ Q+L ++L ++ +++ + LSS + D+ + +KTD
Sbjct 124 VLDQNLLNFLPEQEHSEIYKMLSSCML-----MTDSASSDCLKTD-----------NELE 167
Query 247 FFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWP----PTKMGLDEDN 302
F+C + R S+ K+FP+ + I G +S+ T G DE
Sbjct 168 FYCHLL--RGSLN--PKEFPT-----------YEYIKFVGNFRSYSNVPNSTCNGFDEAV 212
Query 303 EPDNEGC--NLSCLVAIGRLHSHVVPQPVNGEIRVKS--MEYVSRHAIDGKFVFVDQRAT 358
C VA RL PQ + V+ E+ SRH+++ KF+F+D RA
Sbjct 213 PRAYRASPGKQICFVATVRL---ATPQFLKEMCIVEEPLEEFTSRHSLEWKFLFLDHRAP 269
Query 359 AILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRS 418
I+ YLP E+LGTS Y+Y+H DD+ LA CH ++Q K + CY+F K +I L++
Sbjct 270 PIIGYLPFEVLGTSGYDYYHIDDLELLARCHEHLMQFG-KGKSCCYRFLTKGQQWIWLQT 328
Query 419 RWFSFMNPWTKEVEYIVSTNTVV 441
++ + W + E+IV T+ VV
Sbjct 329 HYYITYHQWNSKPEFIVCTHMVV 351
>sp|Q9YIB9|HIF1A_CHICK Hypoxia-inducible factor 1-alpha OS=Gallus
gallus OX=9031 GN=HIF1A PE=2 SV=2
Length=811
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/363 (31%), Positives = 178/363 (49%), Gaps = 54/363 (15%)
Query 84 RRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQH--MKTLRGATNPYTEANYKPTF 141
RR K + ELA +P + +S LDK +++R+ + + M+ L A TEAN
Sbjct 29 RRSKESEVFYELAHQLPLPHTVSAHLDKASIMRLTISYLRMRKLLDAGELETEANM---- 84
Query 142 LSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDI 201
+ EL L+A DGF+ V+ D G ++++SE+V K + +Q DL G S+FD+ HP D
Sbjct 85 --EKELNCFYLKALDGFVMVLSED-GDMIYMSENVNKCMGLTQFDLTGHSVFDFTHPCDH 141
Query 202 AKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVE 261
+++E L+ + PVK G + RSFF RMKC S
Sbjct 142 EELREMLTHRNG-------------PVKK----GKEQ---NTERSFFLRMKCTLTSRG-- 179
Query 262 DKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCN---LSCLVAIG 318
T + K A K +H TG+++ + D N + G ++CLV I
Sbjct 180 -----RTVNIKSATWK---VLHCTGHIRVY-------DTCNNQTHCGYKKPPMTCLVLI- 223
Query 319 RLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFH 378
+P P N E+ + S ++SRH++D KF + D+R T ++ Y P+ELLG S YEY+H
Sbjct 224 ---CEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYH 280
Query 379 QDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTN 438
D HL + H + T+ ++TT Y+ K G ++ + ++ N + + IV N
Sbjct 281 ALDSDHLTKTHHDMF-TKGQVTTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVN 339
Query 439 TVV 441
V+
Sbjct 340 YVL 342
>sp|O61735|CLOCK_DROME Circadian locomoter output cycles protein
kaput OS=Drosophila melanogaster OX=7227 GN=Clk PE=1 SV=3
Length=1027
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/400 (28%), Positives = 190/400 (48%), Gaps = 68/400 (17%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY- 132
R++ + EK+RRD+ NS +++L++L+ T SRK+DK TVL+ + +K AT+
Sbjct 17 RKSRNLSEKKRRDQFNSLVNDLSALISTS---SRKMDKSTVLKSTIAFLKNHNEATDRSK 73
Query 133 ---TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIG 189
+ ++KP FLS+DE HL+L + DGF+ V G I + SES+ L Y DL
Sbjct 74 VFEIQQDWKPAFLSNDEYTHLMLESLDGFMMVFSS-MGSIFYASESITSQLGYLPQDLYN 132
Query 190 QSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTG-LPVKTDITPGPSRLCSGARRSFF 248
+++D + D E L++ PV I P + + S + +F+
Sbjct 133 MTIYDLAYEMD---------------HEALLNIFMNPTPV---IEPRQTDISSSNQITFY 174
Query 249 CRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDED------- 301
++ +K D ++ + GY ++ T G +
Sbjct 175 THLR---------------RGGMEKVDANAYELVKFVGYFRNDTNTSTGSSSEVSNGSNG 219
Query 302 ----------NEPDNEGCNLSCLVAIGRLHSHVVPQPVN--GEIRVKSMEYVSRHAIDGK 349
P+ E V GR+ + PQ + I S E+ S+H+++ K
Sbjct 220 QPAVLPRIFQQNPNAEVDKKLVFVGTGRVQN---PQLIREMSIIDPTSNEFTSKHSMEWK 276
Query 350 FVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKI 408
F+F+D RA I+ Y+P E+LGTS Y+Y+H DD+ + CH ++ QT E +C Y+F
Sbjct 277 FLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEG--KSCYYRFLT 334
Query 409 KDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLE 447
K +I L++ ++ + + + +Y+V T+ VV A VL+
Sbjct 335 KGQQWIWLQTDYYVSYHQFNSKPDYVVCTHKVVSYAEVLK 374
>sp|Q0PGG7|HIF1A_BOSMU Hypoxia-inducible factor 1-alpha OS=Bos
mutus grunniens OX=30521 GN=HIF1A PE=2 SV=1
Length=823
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/375 (29%), Positives = 178/375 (47%), Gaps = 58/375 (15%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT--LRGATNP 131
+E + RR K + ELA +P + +S LDK +V+R+ + +++ L A +
Sbjct 19 KEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGDL 78
Query 132 YTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQS 191
E K ++ L+A DGF+ V+ D G ++++S++V K + +Q +L G S
Sbjct 79 DIEDEMKA------QMNCFYLKALDGFVMVL-TDDGDMIYISDNVNKYMGLTQFELTGHS 131
Query 192 LFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRM 251
+FD+ HP D +++E L+ + GL + G + +RSFF RM
Sbjct 132 VFDFTHPCDHEEMREMLTH------------RNGL-----VKKGKEQ---NTQRSFFLRM 171
Query 252 KCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCN- 310
KC S T + K A K +H TG++ + D + C
Sbjct 172 KCTLTSRG-------RTMNIKSATWK---VLHCTGHIHVY---------DTNSNQSQCGY 212
Query 311 ----LSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQ 366
++CLV I +P P N EI + S ++SRH++D KF + D+R T ++ Y P+
Sbjct 213 KKPPMTCLVLI----CEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPE 268
Query 367 ELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNP 426
ELLG S YEY+H D HL + H + T+ ++TT Y+ K G ++ + ++ N
Sbjct 269 ELLGRSIYEYYHALDSDHLTKTHHDMF-TKGQVTTGQYRMLAKKGGYVWIETQATVIYNT 327
Query 427 WTKEVEYIVSTNTVV 441
+ + IV N VV
Sbjct 328 KNSQPQCIVCVNYVV 342
>sp|Q9XTA5|HIF1A_BOVIN Hypoxia-inducible factor 1-alpha OS=Bos
taurus OX=9913 GN=HIF1A PE=2 SV=1
Length=823
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/375 (29%), Positives = 178/375 (47%), Gaps = 58/375 (15%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT--LRGATNP 131
+E + RR K + ELA +P + +S LDK +V+R+ + +++ L A +
Sbjct 19 KEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGDL 78
Query 132 YTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQS 191
E K ++ L+A DGF+ V+ D G ++++S++V K + +Q +L G S
Sbjct 79 DIEDEMKA------QMNCFYLKALDGFVMVL-TDDGDMIYISDNVNKYMGLTQFELTGHS 131
Query 192 LFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRM 251
+FD+ HP D +++E L+ + GL + G + +RSFF RM
Sbjct 132 VFDFTHPCDHEEMREMLTH------------RNGL-----VKKGKEQ---NTQRSFFLRM 171
Query 252 KCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCN- 310
KC S T + K A K +H TG++ + D + C
Sbjct 172 KCTLTSRG-------RTMNIKSATWK---VLHCTGHIHVY---------DTNSNQSQCGY 212
Query 311 ----LSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQ 366
++CLV I +P P N EI + S ++SRH++D KF + D+R T ++ Y P+
Sbjct 213 KKPPMTCLVLI----CEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPE 268
Query 367 ELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNP 426
ELLG S YEY+H D HL + H + T+ ++TT Y+ K G ++ + ++ N
Sbjct 269 ELLGRSIYEYYHALDSDHLTKTHHDMF-TKGQVTTGQYRMLAKRGGYVWIETQATVIYNT 327
Query 427 WTKEVEYIVSTNTVV 441
+ + IV N VV
Sbjct 328 KNSQPQCIVCVNYVV 342
>sp|Q309Z6|HIF1A_EOSFB Hypoxia-inducible factor 1-alpha OS=Eospalax
fontanierii baileyi OX=146132 GN=HIF1A PE=2 SV=1
Length=819
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 184/386 (48%), Gaps = 60/386 (16%)
Query 65 EHQGRIKNAR--EAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
E + R+ + R E + RR K + ELA +P + +S LDK +V+R+ + ++
Sbjct 9 EKKNRMSSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVMRLTISYL 68
Query 123 KT--LRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
+ L A + E + K ++ L+A DGF+ V+ D G ++++S++V K +
Sbjct 69 RVRKLLDAGDLDIEDDMKA------QMNCFYLKALDGFVMVL-TDDGDMIYISDNVNKYM 121
Query 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
+Q +L G S+FD+ HP D +++E L+ + P+K G +
Sbjct 122 GLTQFELTGHSVFDFTHPCDHEEMREMLTHRNG-------------PIKK----GKEQ-- 162
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
+RSFF RMKC S T + K A K +H TG++ +
Sbjct 163 -NTQRSFFLRMKCTLTSRG-------RTMNIKSATWK---VLHCTGHIHVY--------- 202
Query 301 DNEPDNEGCN-----LSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQ 355
D + C ++CLV I +P P N EI + S ++SRH++D KF + D+
Sbjct 203 DTNSNQPQCGYKKPPMTCLVLI----CEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDE 258
Query 356 RATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFIT 415
R T ++ Y P+ELLG S YEY+H D HL + H + T+ ++TT Y+ K G ++
Sbjct 259 RITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMF-TKGQVTTGQYRMLAKRGGYVW 317
Query 416 LRSRWFSFMNPWTKEVEYIVSTNTVV 441
+ ++ N + + IV N VV
Sbjct 318 VETQATVIYNTKNSQPQCIVCVNYVV 343
>sp|Q16665|HIF1A_HUMAN Hypoxia-inducible factor 1-alpha OS=Homo
sapiens OX=9606 GN=HIF1A PE=1 SV=1
Length=826
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/375 (29%), Positives = 179/375 (48%), Gaps = 58/375 (15%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT--LRGATNP 131
+E + RR K + ELA +P + +S LDK +V+R+ + +++ L A +
Sbjct 19 KEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGDL 78
Query 132 YTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQS 191
E + K ++ L+A DGF+ V+ D G ++++S++V K + +Q +L G S
Sbjct 79 DIEDDMKA------QMNCFYLKALDGFVMVL-TDDGDMIYISDNVNKYMGLTQFELTGHS 131
Query 192 LFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRM 251
+FD+ HP D +++E L+ + GL + G + +RSFF RM
Sbjct 132 VFDFTHPCDHEEMREMLTH------------RNGL-----VKKGKEQ---NTQRSFFLRM 171
Query 252 KCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCN- 310
KC S T + K A K +H TG++ + D + C
Sbjct 172 KCTLTSRG-------RTMNIKSATWK---VLHCTGHIHVY---------DTNSNQPQCGY 212
Query 311 ----LSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQ 366
++CLV I +P P N EI + S ++SRH++D KF + D+R T ++ Y P+
Sbjct 213 KKPPMTCLVLI----CEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPE 268
Query 367 ELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNP 426
ELLG S YEY+H D HL + H + T+ ++TT Y+ K G ++ + ++ N
Sbjct 269 ELLGRSIYEYYHALDSDHLTKTHHDMF-TKGQVTTGQYRMLAKRGGYVWVETQATVIYNT 327
Query 427 WTKEVEYIVSTNTVV 441
+ + IV N VV
Sbjct 328 KNSQPQCIVCVNYVV 342
>sp|Q61221|HIF1A_MOUSE Hypoxia-inducible factor 1-alpha OS=Mus
musculus OX=10090 GN=Hif1a PE=1 SV=3
Length=836
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 180/381 (47%), Gaps = 70/381 (18%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR----GAT 129
+E + RR K + ELA +P + +S LDK +V+R+ + +++ + G
Sbjct 19 KEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGGL 78
Query 130 NPYTEANYKPTFLSDDELKH----LILRAADGFLFVVGCDRGKILFVSESVFKILNYSQN 185
+ S+DE+K L+A DGF+ V+ D G ++++S++V K + +Q
Sbjct 79 D------------SEDEMKAQMDCFYLKALDGFVMVL-TDDGDMVYISDNVNKYMGLTQF 125
Query 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
+L G S+FD+ HP D +++E L+ + R+ G + T +R
Sbjct 126 ELTGHSVFDFTHPCDHEEMREMLTHRNGPVRK-------GKELNT-------------QR 165
Query 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPD 305
SFF RMKC S T + K A K +H TG++ + D +
Sbjct 166 SFFLRMKCTLTSRG-------RTMNIKSATWK---VLHCTGHIHVY---------DTNSN 206
Query 306 NEGCN-----LSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
C ++CLV I +P P N EI + S ++SRH++D KF + D+R T +
Sbjct 207 QPQCGYKKPPMTCLVLI----CEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITEL 262
Query 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
+ Y P+ELLG S YEY+H D HL + H + T+ ++TT Y+ K G ++ + ++
Sbjct 263 MGYEPEELLGRSIYEYYHALDSDHLTKTHHDMF-TKGQVTTGQYRMLAKRGGYVWVETQA 321
Query 421 FSFMNPWTKEVEYIVSTNTVV 441
N + + IV N VV
Sbjct 322 TVIYNTKNSQPQCIVCVNYVV 342
>sp|Q99814|EPAS1_HUMAN Endothelial PAS domain-containing protein
1 OS=Homo sapiens OX=9606 GN=EPAS1 PE=1 SV=3
Length=870
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 188/376 (50%), Gaps = 53/376 (14%)
Query 84 RRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLS 143
RR K ELA +P +++S LDK +++R+A+ ++T + ++ +E + +
Sbjct 26 RRSKETEVFYELAHELPLPHSVSSHLDKASIMRLAISFLRTHKLLSSVCSENESEAE--A 83
Query 144 DDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAK 203
D ++ +L L+A +GF+ VV D G ++F+SE++ K + +Q +L G S+FD+ HP D +
Sbjct 84 DQQMDNLYLKALEGFIAVVTQD-GDMIFLSENISKFMGLTQVELTGHSIFDFTHPCDHEE 142
Query 204 VKEQLSSSDTAPRERLIDAKTGLPVKT-DITPGPSRLCSGARRSFFCRMKCNRPSVKVED 262
++E LS + +G K+ D++ R FF RMKC V +
Sbjct 143 IRENLS----------LKNGSGFGKKSKDMS---------TERDFFMRMKCT-----VTN 178
Query 263 KDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCN-----LSCLVAI 317
+ T + K A K +H TG +K + + P N C LSCL+ +
Sbjct 179 RG--RTVNLKSATWK---VLHCTGQVKVY--------NNCPPHNSLCGYKEPLLSCLIIM 225
Query 318 GRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYF 377
H P + +I + S ++SRH++D KF + D R T ++ Y P+ELLG S YE++
Sbjct 226 CEPIQH----PSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELIGYHPEELLGRSAYEFY 281
Query 378 HQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVST 437
H D ++ + H Q L T+ ++ + Y+ K G ++ L ++ NP + + I+
Sbjct 282 HALDSENMTKSH-QNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQPQCIMCV 340
Query 438 NTVVLANVLEGGDPTF 453
N V+ + +E D F
Sbjct 341 NYVL--SEIEKNDVVF 354
>sp|O35800|HIF1A_RAT Hypoxia-inducible factor 1-alpha OS=Rattus
norvegicus OX=10116 GN=Hif1a PE=2 SV=1
Length=825
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 176/377 (47%), Gaps = 62/377 (16%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT--LRGATNP 131
+E + RR K + ELA +P + +S LDK +V+R+ + +++ L A +
Sbjct 19 KEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVMRLTISYLRVRKLLDAGDL 78
Query 132 YTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQS 191
E K ++ L+A DGF+ V+ D G ++++S++V K + +Q +L G S
Sbjct 79 DIEDEMKA------QMNCFYLKAPDGFVMVL-TDDGDMIYISDNVNKYMGLTQFELTGHS 131
Query 192 LFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC--SGARRSFFC 249
+FD+ HP D +++E L+ + GP R +RSFF
Sbjct 132 VFDFTHPCDHEEMREMLTHRN----------------------GPVRKGKEQNTQRSFFL 169
Query 250 RMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGC 309
RMKC S T + K A K +H TG++ + D + C
Sbjct 170 RMKCTLTSRG-------RTMNIKSATWK---VLHCTGHIHVY---------DTSSNQPQC 210
Query 310 N-----LSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYL 364
++CLV I +P P N EI + S ++SRH++D KF + D+R T ++ Y
Sbjct 211 GYKKPPMTCLVLI----CEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYE 266
Query 365 PQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFM 424
P+ELLG S YEY+H D HL + H + T+ ++TT Y+ K G ++ + ++
Sbjct 267 PEELLGRSIYEYYHALDSDHLTKTHHDMF-TKGQVTTGQYRMLAKRGGYVWVETQATVIY 325
Query 425 NPWTKEVEYIVSTNTVV 441
N + + IV N VV
Sbjct 326 NTKDSQPQCIVCVNYVV 342
>sp|P97481|EPAS1_MOUSE Endothelial PAS domain-containing protein
1 OS=Mus musculus OX=10090 GN=Epas1 PE=1 SV=2
Length=874
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/383 (28%), Positives = 190/383 (50%), Gaps = 47/383 (12%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
+E + RR K ELA +P +++S LDK +++R+A+ ++T + ++ +
Sbjct 16 KEKSRDAARCRRSKETEVFYELAHELPLPHSVSSHLDKASIMRLAISFLRTHKLLSSVCS 75
Query 134 EANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLF 193
E + +D ++ +L L+A +GF+ VV D G ++F+SE++ K + +Q +L G S+F
Sbjct 76 ENESEAE--ADQQMDNLYLKALEGFIAVVTQD-GDMIFLSENISKFMGLTQVELTGHSIF 132
Query 194 DYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKT-DITPGPSRLCSGARRSFFCRMK 252
D+ HP D +++E L+ + +G K+ D++ R FF RMK
Sbjct 133 DFTHPCDHEEIRENLT----------LKNGSGFGKKSKDVS---------TERDFFMRMK 173
Query 253 CNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWP--PTKMGLDEDNEPDNEGCN 310
C V ++ T + K A K +H TG ++ + P L EP
Sbjct 174 CT-----VTNRG--RTVNLKSATWK---VLHCTGQVRVYNNCPPHSSLCGSKEP-----L 218
Query 311 LSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLG 370
LSCL+ + H P + +I + S ++SRH++D KF + D R ++ Y P+ELLG
Sbjct 219 LSCLIIMCEPIQH----PSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELIGYHPEELLG 274
Query 371 TSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKE 430
S YE++H D ++ + H Q L T+ ++ + Y+ K G ++ L ++ NP +
Sbjct 275 RSAYEFYHALDSENMTKSH-QNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQ 333
Query 431 VEYIVSTNTVVLANVLEGGDPTF 453
+ I+ N V+ + +E D F
Sbjct 334 PQCIMCVNYVL--SEIEKNDVVF 354
>sp|Q9JHS1|EPAS1_RAT Endothelial PAS domain-containing protein
1 OS=Rattus norvegicus OX=10116 GN=Epas1 PE=2 SV=1
Length=874
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/370 (28%), Positives = 181/370 (49%), Gaps = 43/370 (12%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
+E + RR K ELA +P +++S LDK +++R+A+ ++T + ++ +
Sbjct 16 KEKSRDAARCRRSKETEVFYELAHELPLPHSVSSHLDKASIMRLAISFLRTHKLLSSVCS 75
Query 134 EANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLF 193
E + +D ++ +L L+A +GF+ VV D G ++F+SE++ K + +Q +L G S+F
Sbjct 76 ENESEAE--ADQQMDNLYLKALEGFIAVVTQD-GDMIFLSENISKFMGLTQVELTGHSIF 132
Query 194 DYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKC 253
D+ HP D +++E L+ +KT G R FF RMKC
Sbjct 133 DFTHPCDHEEIRENLT------------------LKTGSGFGKKNKDRSTERDFFMRMKC 174
Query 254 NRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWP--PTKMGLDEDNEPDNEGCNL 311
V ++ T + K A K +H TG ++ + P L EP L
Sbjct 175 T-----VTNRG--RTVNLKSATWK---VLHCTGQVRVYNNCPPHSSLCGYKEP-----LL 219
Query 312 SCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGT 371
SCL+ + H P + +I + S ++SRH++D KF + D R ++ Y P+ELLG
Sbjct 220 SCLIIMCEPIQH----PSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELVGYHPEELLGR 275
Query 372 SCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEV 431
S YE++H D ++ + H Q L T+ ++ + Y+ K G ++ L ++ NP +
Sbjct 276 SAYEFYHALDSENMTKSH-QNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVVYNPRNLQP 334
Query 432 EYIVSTNTVV 441
+ I+ N V+
Sbjct 335 QCIMCVNYVL 344
>sp|A1YFY6|SIM1_PANPA Single-minded homolog 1 OS=Pan paniscus
OX=9597 GN=SIM1 PE=3 SV=1
Length=766
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/392 (28%), Positives = 183/392 (47%), Gaps = 49/392 (13%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL----RGAT 129
+E + RR+K NS ELA L+P +A++ +LDK +++R+ ++K G
Sbjct 2 KEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGLG 61
Query 130 NPYTEANY-KPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
+ +++ P EL +L+ DGF+FVV D GKI+++SE+ L SQ +L
Sbjct 62 EAWGHSSWTSPLDNVGRELGSHLLQTLDGFIFVVAPD-GKIMYISETASVHLGLSQVELT 120
Query 189 GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFF 248
G S+++Y+HP D ++ L++ + + + RSFF
Sbjct 121 GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEI-------------------ERSFF 161
Query 249 CRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEG 308
RMKC + ++ TC K IH +GYLK + LD +G
Sbjct 162 LRMKC-----VLAKRNAGLTCGGYK-------VIHCSGYLKI---RQYSLDMS---PFDG 203
Query 309 CNLSC-LVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
C + LVA+G H +P EI++ S ++ R ++D K +F+D R + Y PQ+
Sbjct 204 CYQNVGLVAVG----HSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQD 259
Query 368 LLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPW 427
L+ + Y + H D HL C +L + ++TT Y+F K G ++ ++S N
Sbjct 260 LIEKTLYHHVHGCDTFHL-RCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSR 318
Query 428 TKEVEYIVSTNTVVLANVLEGGDPTFPQLTAS 459
+ IVS N V+ +G + Q++AS
Sbjct 319 SSRPHCIVSVNYVLTDTEYKGLQLSLDQISAS 350
>sp|P05709|SIM_DROME Protein single-minded OS=Drosophila melanogaster
OX=7227 GN=sim PE=1 SV=3
Length=697
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/382 (29%), Positives = 178/382 (47%), Gaps = 41/382 (11%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
+E + RR+K N+ ELA L+P A++ +LDK +V+R+ ++K + +
Sbjct 26 KEKSKNAARTRREKENTEFCELAKLLPLPAAITSQLDKASVIRLTTSYLKMRQVFPDGLG 85
Query 134 EA-NYKPTFLSDDELKHL---ILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIG 189
EA P +K L +L+ DGF+FVV D GKI+++SE+ L SQ +L G
Sbjct 86 EAWGSSPAMQRGATIKELGSHLLQTLDGFIFVVAPD-GKIMYISETASVHLGLSQVELTG 144
Query 190 QSLFDYLHPKD------IAKVKEQLSSSDTAPRERLIDAKTGL--PVKTDITPGPSRLCS 241
S+F+Y+H D I + ++ A I + G+ P D G +
Sbjct 145 NSIFEYIHNYDQDEMNAILSLHPHINQHPLAQTHTPIGSPNGVQHPSAYDHDRGSHTI-- 202
Query 242 GARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKS--FCTIHSTGYLKSWPPTKMGLD 299
++FF RMKC +K+ A + F IH +GYLK+ G
Sbjct 203 EIEKTFFLRMKC--------------VLAKRNAGLTTSGFKVIHCSGYLKARIYPDRGDG 248
Query 300 EDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATA 359
+ + N G LVA+G H +P EI++ ++ R +D K +F D R +
Sbjct 249 QGSLIQNLG-----LVAVG----HSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQ 299
Query 360 ILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSR 419
+ Y PQ+L+ + Y+Y H DI + C Q+L + ++TT Y+F K G ++ ++S
Sbjct 300 LTGYEPQDLIEKTLYQYIHAADIMAM-RCSHQILLYKGQVTTKYYRFLTKGGGWVWVQSY 358
Query 420 WFSFMNPWTKEVEYIVSTNTVV 441
N + +IVS N V+
Sbjct 359 ATLVHNSRSSREVFIVSVNYVL 380
>sp|Q61045|SIM1_MOUSE Single-minded homolog 1 OS=Mus musculus
OX=10090 GN=Sim1 PE=1 SV=3
Length=765
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 180/392 (46%), Gaps = 49/392 (13%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
+E + RR+K NS ELA L+P +A++ +LDK +++R+ ++K
Sbjct 2 KEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGLG 61
Query 134 EA-----NYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
EA P EL +L+ DGF+FVV D GKI+++SE+ L SQ +L
Sbjct 62 EAWGHTSRTSPLDNVGRELGSHLLQTLDGFIFVVAPD-GKIMYISETASVHLGLSQVELT 120
Query 189 GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFF 248
G S+++Y+HP D ++ L++ + + + RSFF
Sbjct 121 GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEI-------------------ERSFF 161
Query 249 CRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEG 308
RMKC + ++ TC K IH +GYLK + LD +G
Sbjct 162 LRMKC-----VLAKRNAGLTCGGYKV-------IHCSGYLKI---RQYSLDMS---PFDG 203
Query 309 CNLSC-LVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
C + LVA+G H +P EI++ S ++ R ++D K +F+D R + Y PQ+
Sbjct 204 CYQNVGLVAVG----HSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQD 259
Query 368 LLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPW 427
L+ + Y + H D HL C +L + ++TT Y+F K G ++ ++S N
Sbjct 260 LIEKTLYHHVHGCDTFHL-RCAHHLLLVKGQVTTKYYRFLAKQGGWVWVQSYATIVHNSR 318
Query 428 TKEVEYIVSTNTVVLANVLEGGDPTFPQLTAS 459
+ IVS N V+ +G + Q++AS
Sbjct 319 SSRPHCIVSVNYVLTDTEYKGLQLSLDQISAS 350
>sp|P81133|SIM1_HUMAN Single-minded homolog 1 OS=Homo sapiens
OX=9606 GN=SIM1 PE=1 SV=2
Length=766
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 180/392 (46%), Gaps = 49/392 (13%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
+E + RR+K NS ELA L+P +A++ +LDK +++R+ ++K
Sbjct 2 KEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGLG 61
Query 134 EA-----NYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
EA P EL +L+ DGF+FVV D GKI+++SE+ L SQ +L
Sbjct 62 EAWGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPD-GKIMYISETASVHLGLSQVELT 120
Query 189 GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFF 248
G S+++Y+HP D ++ L++ + + + RSFF
Sbjct 121 GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEI-------------------ERSFF 161
Query 249 CRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEG 308
RMKC + ++ TC K IH +GYLK + LD +G
Sbjct 162 LRMKC-----VLAKRNAGLTCGGYK-------VIHCSGYLKI---RQYSLDMS---PFDG 203
Query 309 CNLSC-LVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
C + LVA+G H +P EI++ S ++ R ++D K +F+D R + Y PQ+
Sbjct 204 CYQNVGLVAVG----HSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQD 259
Query 368 LLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPW 427
L+ + Y + H D HL C +L + ++TT Y+F K G ++ ++S N
Sbjct 260 LIEKTLYHHVHGCDTFHL-RCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSR 318
Query 428 TKEVEYIVSTNTVVLANVLEGGDPTFPQLTAS 459
+ IVS N V+ +G + Q++AS
Sbjct 319 SSRPHCIVSVNYVLTDTEYKGLQLSLDQISAS 350
>sp|A2T6X9|SIM1_PANTR Single-minded homolog 1 OS=Pan troglodytes
OX=9598 GN=SIM1 PE=3 SV=1
Length=766
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 180/392 (46%), Gaps = 49/392 (13%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
+E + RR+K NS ELA L+P +A++ +LDK +++R+ ++K
Sbjct 2 KEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGLG 61
Query 134 EA-----NYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
EA P EL +L+ DGF+FVV D GKI+++SE+ L SQ +L
Sbjct 62 EAWGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPD-GKIMYISETASVHLGLSQVELT 120
Query 189 GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFF 248
G S+++Y+HP D ++ L++ + + + RSFF
Sbjct 121 GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEI-------------------ERSFF 161
Query 249 CRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEG 308
RMKC + ++ TC K IH +GYLK + LD +G
Sbjct 162 LRMKC-----VLAKRNAGLTCGGYK-------VIHCSGYLKI---RQYSLDMS---PFDG 203
Query 309 CNLSC-LVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
C + LVA+G H +P EI++ S ++ R ++D K +F+D R + Y PQ+
Sbjct 204 CYQNVGLVAVG----HSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQD 259
Query 368 LLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPW 427
L+ + Y + H D HL C +L + ++TT Y+F K G ++ ++S N
Sbjct 260 LIEKTLYHHVHGCDTFHL-RCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSR 318
Query 428 TKEVEYIVSTNTVVLANVLEGGDPTFPQLTAS 459
+ IVS N V+ +G + Q++AS
Sbjct 319 SSRPHCIVSVNYVLTDTEYKGLQLSLDQISAS 350
>sp|Q14190|SIM2_HUMAN Single-minded homolog 2 OS=Homo sapiens
OX=9606 GN=SIM2 PE=1 SV=2
Length=667
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 174/374 (47%), Gaps = 49/374 (13%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
+E K RR+K N ELA L+P +A++ +LDK +++R+ ++K
Sbjct 2 KEKSKNAAKTRREKENGEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLG 61
Query 134 EANYKPTFLS-----DDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
+A +P+ EL +L+ DGF+FVV D GKI+++SE+ L SQ +L
Sbjct 62 DAWGQPSRAGPLDGVAKELGSHLLQTLDGFVFVVASD-GKIMYISETASVHLGLSQVELT 120
Query 189 GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFF 248
G S+++Y+HP D ++ L++ L + + RSFF
Sbjct 121 GNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEI-------------------ERSFF 161
Query 249 CRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEG 308
RMKC + ++ TCS K IH +GYLK + LD +
Sbjct 162 LRMKC-----VLAKRNAGLTCSGYK-------VIHCSGYLKI---RQYMLDMSL---YDS 203
Query 309 C-NLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
C + LVA+G+ +P EI++ S ++ R ++D K +F+D R T + Y PQ+
Sbjct 204 CYQIVGLVAVGQ----SLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGYEPQD 259
Query 368 LLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPW 427
L+ + Y + H D+ HL H +L + ++TT Y+ K G ++ ++S N
Sbjct 260 LIEKTLYHHVHGCDVFHLRYAH-HLLLVKGQVTTKYYRLLSKRGGWVWVQSYATVVHNSR 318
Query 428 TKEVEYIVSTNTVV 441
+ IVS N V+
Sbjct 319 SSRPHCIVSVNYVL 332
>sp|Q98SJ5|SIM1A_DANRE Single-minded homolog 1-A OS=Danio rerio
OX=7955 GN=sim1a PE=2 SV=1
Length=745
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/395 (28%), Positives = 181/395 (46%), Gaps = 51/395 (13%)
Query 82 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL----RGATNPYTEANY 137
+ RR+K NS ELA L+P +A++ + DK +++R+ ++K G + +
Sbjct 10 RTRREKENSEFYELAKLLPLPSAITSQSDKASIIRLTTSYLKMRIVFPEGLGESWGHVS- 68
Query 138 KPTFLSD--DELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDY 195
+ T L + EL +L+ DGF+FVV D GKIL++SE+ L SQ +L G S+++Y
Sbjct 69 RTTSLENVGRELGSHLLQTLDGFIFVVAPD-GKILYISETASVHLGLSQEELTGNSIYEY 127
Query 196 LHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNR 255
+HP D ++ L++ + + + RSFF RMKC
Sbjct 128 IHPADHDEMTAVLTAHQPYHSHFVHEYEM-------------------ERSFFLRMKC-- 166
Query 256 PSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSC-L 314
+ + TC K IH +GYLK + LD +GC + L
Sbjct 167 ---VLAKANAGLTCGGYKV-------IHCSGYLKI---RQYSLDMS---PFDGCYQNVGL 210
Query 315 VAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCY 374
VA+G H +P EI++ S ++ R ++D K +F+D R + Y PQ+L+ + Y
Sbjct 211 VAVG----HSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLY 266
Query 375 EYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYI 434
+ H D HL C +L + ++TT Y+F K G ++ ++S N + I
Sbjct 267 HHVHSCDTFHL-RCAHHLLLVKGQVTTKYYRFLAKQGGWVWVQSYATIVHNSRSSRPHCI 325
Query 435 VSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPS 469
VS N V+ +G + Q ++ S PS
Sbjct 326 VSVNYVLTDTEYKGLQLSLDQAASTKPSFTYNSPS 360
>sp|Q61079|SIM2_MOUSE Single-minded homolog 2 OS=Mus musculus
OX=10090 GN=Sim2 PE=1 SV=1
Length=657
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 173/374 (46%), Gaps = 49/374 (13%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
+E K RR+K N ELA L+P +A++ +LDK +++R+ ++K
Sbjct 2 KEKSKNAAKTRREKENGEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLG 61
Query 134 EANYKPTFLS-----DDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
+A +P+ EL +L+ DGF+FVV D GKI+++SE+ L SQ +L
Sbjct 62 DAWGQPSRTGPLDSVAKELGSHLLQTLDGFVFVVASD-GKIMYISETASVHLGLSQVELT 120
Query 189 GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFF 248
G S+++Y+HP D ++ L++ L + + RSFF
Sbjct 121 GNSIYEYIHPSDHDEMTAVLTAHPPLHHHLLQEYEI-------------------ERSFF 161
Query 249 CRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEG 308
RMKC + ++ TCS K IH +GYLK + LD +
Sbjct 162 LRMKC-----VLAKRNAGLTCSGYK-------VIHCSGYLKI---RQYMLDMS---LYDS 203
Query 309 C-NLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
C + LVA+G+ +P EI++ S ++ R ++D K +F+D R T + Y PQ+
Sbjct 204 CYQIVGLVAVGQ----SLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQD 259
Query 368 LLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPW 427
L+ + Y + H D HL H +L + ++TT Y+ K G ++ ++S N
Sbjct 260 LIEKTLYHHVHGCDTFHLRYAH-HLLLVKGQVTTKYYRLLSKLGGWVWVQSYATVVHNSR 318
Query 428 TKEVEYIVSTNTVV 441
+ IVS N V+
Sbjct 319 SSRPHCIVSVNYVL 332
>sp|Q98SW2|HIF1A_ONCMY Hypoxia-inducible factor 1-alpha OS=Oncorhynchus
mykiss OX=8022 GN=hif1a PE=2 SV=1
Length=766
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/382 (27%), Positives = 174/382 (46%), Gaps = 50/382 (13%)
Query 65 EHQGRIKNAR--EAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ-- 120
E + R+ + R E + RR K + ELA +P ++++ LDK +++R+A+
Sbjct 8 EKKSRVSSDRRKEKSRDAARCRRGKESEVFYELAQELPLPHSVTSNLDKASIMRLAISYL 67
Query 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
HM+ L N + + D +L L+A +GFL V+ D G ++++SE+V K L
Sbjct 68 HMRNLLSTDNEEEQEERE----MDSQLNGSYLKAIEGFLMVLSED-GDMIYLSENVNKCL 122
Query 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
+Q DL G S+F+Y HP D +++E L +TG K+
Sbjct 123 GLAQIDLTGLSVFEYTHPCDHEELREMLVH------------RTGTSKKSKE-------- 162
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWP-PTKMGLD 299
RSFF RMKC + T + K A K +H + +++ P +
Sbjct 163 PNTERSFFLRMKCTL-------TNRGRTVNVKSATWK---VLHCSDHVRVHESPAEQIPG 212
Query 300 EDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATA 359
EP L C +P P N E + + ++SRH +D KF + D+R T
Sbjct 213 GHKEPSVPYLVLVC---------DPIPHPSNIEAPLDTKTFLSRHTLDMKFTYCDERITE 263
Query 360 ILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSR 419
++ Y P++LL S YEY+H D HL + H + + +++T Y+ K G F+ + ++
Sbjct 264 LMGYDPEDLLNRSVYEYYHALDSDHLMKTHHNLF-AKGQVSTGQYRMLAKRGGFVWVETQ 322
Query 420 WFSFMNPWTKEVEYIVSTNTVV 441
N + + +V N V+
Sbjct 323 ATVIYNNKNSQPQCVVCVNYVL 344
>sp|Q9QZQ0|NPAS3_MOUSE Neuronal PAS domain-containing protein
3 OS=Mus musculus OX=10090 GN=Npas3 PE=1 SV=1
Length=925
Score = 120 bits (300), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 106/410 (26%), Positives = 182/410 (44%), Gaps = 73/410 (18%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN--- 130
+E + RR K N ELA L+P A++ +LDK +++R+ + ++K +R N
Sbjct 60 KEKSRDAARSRRGKENFEFYELAKLLPLPAAITSQLDKASIIRLTISYLK-MRDFANQGD 118
Query 131 -PY---------------TEANYKPTFLSDDELK-HL---ILRAADGFLFVVGCDRGKIL 170
P+ + P+ L+ + + HL IL++ DGF+F + GK L
Sbjct 119 PPWNLRMEGPPPNTSVKGAQRRRSPSALAIEVFEAHLGSHILQSLDGFVFALN-QEGKFL 177
Query 171 FVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDA-------- 222
++SE+V L SQ +L G S+FDY+HP D ++ EQL R L
Sbjct 178 YISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTTEDAASS 237
Query 223 -------KTGLPVKTDITPGPSRLCSG--ARRSFFCRMKCNRPSVKVEDKDFPSTCSKKK 273
+T PV+T PS L + RSFF RMK ST +K+
Sbjct 238 ASSSSQSETPEPVETT---SPSLLTTDNTLERSFFIRMK--------------STLTKRG 280
Query 274 ADRKS--FCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNG 331
KS + IH TG L+ P G ++ + LV + +H +P P
Sbjct 281 VHIKSSGYKVIHITGRLRLRVPLSHGRTVPSQ-------IMGLVVV----AHALPPPTIN 329
Query 332 EIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQ 391
E+R+ +V+R +D ++ + R + + P +++G CY + H +D+ + H
Sbjct 330 EVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLD 389
Query 392 VLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 441
+L + + T Y++ K+G +I ++S +N + I+ N ++
Sbjct 390 LLN-KGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWVNYLL 438
>sp|Q9Y2N7|HIF3A_HUMAN Hypoxia-inducible factor 3-alpha OS=Homo
sapiens OX=9606 GN=HIF3A PE=1 SV=2
Length=669
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 163/364 (45%), Gaps = 56/364 (15%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
+E + RR + + +LA +P +S LDK +++R+ + +++ R
Sbjct 16 KEKSRDAARSRRSQETEVLYQLAHTLPFARGVSAHLDKASIMRLTISYLRMHRLCA---- 71
Query 134 EANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLF 193
+ + L L+A +GF+ V+ + G + ++SE+V K L SQ +LIG S+F
Sbjct 72 AGEWNQVGAGGEPLDACYLKALEGFVMVLTAE-GDMAYLSENVSKHLGLSQLELIGHSIF 130
Query 194 DYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKC 253
D++HP D ++++ L+ T R R ++A T R F RMK
Sbjct 131 DFIHPCDQEELQDALTPQQTLSR-RKVEAPT-------------------ERCFSLRMKS 170
Query 254 NRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSW-PPTKMGLDEDNEPDNEGCNLS 312
S T + K A K ++ +G+++++ PP + PD+E L
Sbjct 171 TLTSRG-------RTLNLKAATWK---VLNCSGHMRAYKPPAQT--SPAGSPDSEP-PLQ 217
Query 313 CLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTS 372
CLV I +P P + E + ++SRH++D KF + D R + Y P +L+G S
Sbjct 218 CLVLI----CEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEVAGYSPDDLIGCS 273
Query 373 CYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVE 432
YEY H D +++ +L + +T Y+F + G ++ WT+
Sbjct 274 AYEYIHALDSDAVSKSIHTLLSKGQAVTGQ-YRFLARSGGYL------------WTQTQA 320
Query 433 YIVS 436
+VS
Sbjct 321 TVVS 324
>sp|Q0VBL6|HIF3A_MOUSE Hypoxia-inducible factor 3-alpha OS=Mus
musculus OX=10090 GN=Hif3a PE=1 SV=2
Length=662
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 171/390 (44%), Gaps = 71/390 (18%)
Query 50 MDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKL 109
MD D+D + L R + +R+A + RR + + +LA +P +S L
Sbjct 1 MDWDQDRSNTEL-------RKEKSRDA----ARSRRSQETEVLYQLAHTLPFARGVSAHL 49
Query 110 DKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKI 169
DK +++R+ + +++ R + + L L+A +GF+ V+ + G +
Sbjct 50 DKASIMRLTISYLRMHRLCA----AGEWNQVEKGGEPLDACYLKALEGFVMVLTAE-GDM 104
Query 170 LFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVK 229
++SE+V K L SQ +LIG S+FD++HP D ++++ L+ PR L K P +
Sbjct 105 AYLSENVSKHLGLSQLELIGHSIFDFIHPCDQEELQDALT-----PRPNLSKKKLEAPTE 159
Query 230 TDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLK 289
R F RMK S T + K A K +H +G+++
Sbjct 160 ---------------RHFSLRMKSTLTSRG-------RTLNLKAATWK---VLHCSGHMR 194
Query 290 SWPP---TKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAI 346
++ P T +EP L CLV I +P P + E + ++SRH++
Sbjct 195 AYKPPAQTSPAGSPRSEPP-----LQCLVLI----CEAIPHPASLEPPLGRGAFLSRHSL 245
Query 347 DGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKF 406
D KF + D+R + Y P +L+G S YEY H D ++ +L + +T Y+F
Sbjct 246 DMKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLLSKGQAVTGQ-YRF 304
Query 407 KIKDGSFITLRSRWFSFMNPWTKEVEYIVS 436
+ G ++ WT+ +VS
Sbjct 305 LARTGGYL------------WTQTQATVVS 322
>sp|Q8IXF0|NPAS3_HUMAN Neuronal PAS domain-containing protein
3 OS=Homo sapiens OX=9606 GN=NPAS3 PE=1 SV=1
Length=933
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 184/412 (45%), Gaps = 75/412 (18%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN--- 130
+E + RR K N ELA L+P A++ +LDK +++R+ + ++K +R N
Sbjct 53 KEKSRDAARSRRGKENFEFYELAKLLPLPAAITSQLDKASIIRLTISYLK-MRDFANQGD 111
Query 131 -PY-----------------TEANYKPTFLSDDELK-HL---ILRAADGFLFVVGCDRGK 168
P+ + P+ L+ + + HL IL++ DGF+F + + GK
Sbjct 112 PPWNLRMEGPPPNTSVKVIGAQRRRSPSALAIEVFEAHLGSHILQSLDGFVFALNQE-GK 170
Query 169 ILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDA------ 222
L++SE+V L SQ +L G S+FDY+HP D ++ EQL R L
Sbjct 171 FLYISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGA 230
Query 223 ---------KTGLPVKTDITPGPSRLCSG--ARRSFFCRMKCNRPSVKVEDKDFPSTCSK 271
+T PV++ PS L + RSFF RMK ST +K
Sbjct 231 SSASSSSQSETPEPVEST---SPSLLTTDNTLERSFFIRMK--------------STLTK 273
Query 272 KKADRKS--FCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPV 329
+ KS + IH TG L+ ++ L ++ + LV + +H +P P
Sbjct 274 RGVHIKSSGYKVIHITGRLR----LRVSLSHGRTVPSQ---IMGLVVV----AHALPPPT 322
Query 330 NGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECH 389
E+R+ +V+R +D ++ + R + + P +++G CY + H +D+ + H
Sbjct 323 INEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSH 382
Query 390 RQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 441
+L + + T Y++ K+G +I ++S +N + I+ N ++
Sbjct 383 LDLLN-KGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWVNYLL 433
>sp|Q9I8A9|HIF1A_XENLA Hypoxia-inducible factor 1-alpha OS=Xenopus
laevis OX=8355 GN=hif1a PE=2 SV=1
Length=805
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/376 (27%), Positives = 173/376 (46%), Gaps = 68/376 (18%)
Query 84 RRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRM-----AVQHMKTLRGATNPYTEANYK 138
RR + EL+ +P + +S LDK +++R+ AV+ + G + TE
Sbjct 29 RRSNESEVFYELSHELPLPHNVSSHLDKASIMRLDHQLPAVEKVAD-AGDLDGETEL--- 84
Query 139 PTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHP 198
D +L L+A +GF+ V+ + G ++++SE+V K + +Q +L G S+FD+ HP
Sbjct 85 -----DKQLNCFYLKALEGFVLVLT-EEGDMIYLSENVNKCMGLTQFELTGHSVFDFTHP 138
Query 199 KDIAKVKEQLSSSD--TAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRP 256
D +++E L+ + R+R + LP + + + NR
Sbjct 139 CDHEELREMLTFRNGPAKKRKRTNHREKFLP---------------SYEMYINQSWKNR- 182
Query 257 SVKVEDKDFPS-----TCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNL 311
KV + PS C A+ ++ C GY K PP +
Sbjct 183 EYKVSHMEGPSLYRTHACIYDNANNQNHC-----GYKK--PP-----------------M 218
Query 312 SCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGT 371
+C+V I +P P N E + S ++SRH++D KF + D+R T ++ Y P ELLG
Sbjct 219 TCMVVI----CEPIPHPSNIEFPLDSKTFLSRHSLDMKFSYCDERVTELVGYEPDELLGR 274
Query 372 SCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEV 431
S YEY+H D HL + + + T+ ++TT Y+ K G ++ + ++ N +
Sbjct 275 SVYEYYHALDSDHLTKPNYNMF-TKGQVTTGQYRMLAKKGGYVWVETQATVIYNSKNSQP 333
Query 432 EYIVSTNTVVLANVLE 447
+ IV N VL+ V+E
Sbjct 334 QCIVCVN-YVLSEVVE 348
>sp|P97459|NPAS1_MOUSE Neuronal PAS domain-containing protein
1 OS=Mus musculus OX=10090 GN=Npas1 PE=1 SV=1
Length=594
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 101/380 (27%), Positives = 168/380 (44%), Gaps = 78/380 (21%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGAT---N 130
+E + RR K N ELA L+P A+S +LDK +++R++V +++ R A
Sbjct 47 KEKSRNAARWRRGKENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAP 106
Query 131 PYTEANYKP------------TFLSDDELKHL---ILRAADGFLFVVGCDRGKILFVSES 175
P+ P +S+ +HL IL++ DGF+F + + GK L++SE+
Sbjct 107 PWGLRAVGPPAGLAPGRRGPVALVSEVFEQHLGGHILQSLDGFVFALNQE-GKFLYISET 165
Query 176 VFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLS--SSDTAP-------------RERLI 220
V L SQ +L G S+FDY+HP D ++V EQL ++ P L+
Sbjct 166 VSIYLGLSQVELTGSSVFDYIHPGDHSEVLEQLGLRAASIGPPTPPSVSSSSSSSSSSLV 225
Query 221 DAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKS-- 278
D T+ +P RSFF RMK ST +K+ + K+
Sbjct 226 DTPEIEASPTEASPA----FRAQERSFFVRMK--------------STLTKRGLNVKASG 267
Query 279 FCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSM 338
+ IH TG L++ +G LVA+G H +P E+ +
Sbjct 268 YKVIHVTGRLRA---RALG----------------LVALG----HTLPPAPLAELPLHGH 304
Query 339 EYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREK 398
V R ++ + + R + + P EL+G SCY++ H D + + H +L + +
Sbjct 305 MIVFRLSLGLTILACESRVSDHMDMGPSELVGRSCYQFVHGQDATRIRQSHLDLLD-KGQ 363
Query 399 ITTNCYKFKIKDGSFITLRS 418
+ T Y++ + G F+ L+S
Sbjct 364 VVTGYYRWLQRAGGFVWLQS 383
>sp|Q9JHS2|HIF3A_RAT Hypoxia-inducible factor 3-alpha OS=Rattus
norvegicus OX=10116 GN=Hif3a PE=1 SV=1
Length=662
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/388 (25%), Positives = 169/388 (44%), Gaps = 67/388 (17%)
Query 50 MDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKL 109
MD D+D L R + +R+A + RR + + +LA +P +S L
Sbjct 1 MDWDQDRSSTEL-------RKEKSRDA----ARSRRSQETEVLYQLAHTLPFARGVSAHL 49
Query 110 DKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKI 169
DK +++R+ + +++ R + + L L+A +GF+ V+ + G +
Sbjct 50 DKASIMRLTISYLRMHRLCA----AGEWNQVRKEGEPLDACYLKALEGFVMVLTAE-GDM 104
Query 170 LFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVK 229
++SE+V K L SQ +LIG S+FD++HP D ++++ L+ PR L K
Sbjct 105 AYLSENVSKHLGLSQLELIGHSIFDFIHPCDQEELQDALT-----PRPSLSKKK------ 153
Query 230 TDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLK 289
S +G R F RMK S ++ +H +G+++
Sbjct 154 -------SEAATG--RHFSLRMKST----------LTSRGRALNLKAATWKVLHCSGHMR 194
Query 290 SW-PPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDG 348
++ PP + P +E L CLV I +P P + E + ++SRH++D
Sbjct 195 AYKPPAQTS--PAGSPRSEP-PLQCLVLI----CEAIPHPASLEPPLGRGAFLSRHSLDM 247
Query 349 KFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKI 408
KF + D+R + Y P +L+G S YEY H D ++ +L + +T Y+F
Sbjct 248 KFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLLSKGQAVTGQ-YRFLA 306
Query 409 KDGSFITLRSRWFSFMNPWTKEVEYIVS 436
+ G ++ WT+ +VS
Sbjct 307 RTGGYL------------WTQTQATVVS 322
>sp|Q99742|NPAS1_HUMAN Neuronal PAS domain-containing protein
1 OS=Homo sapiens OX=9606 GN=NPAS1 PE=1 SV=2
Length=590
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 77/379 (20%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT--------- 124
+E + RR K N ELA L+P A+S +LDK +++R++V +++
Sbjct 47 KEKSRNAARSRRGKENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAP 106
Query 125 ---LRGATNPYTEANYK---PTFLSDDELKHL---ILRAADGFLFVVGCDRGKILFVSES 175
LR A P A + +S+ +HL IL++ DGF+F + + GK L++SE+
Sbjct 107 PWGLRAAGPPAGLAPGRRGPAALVSEVFEQHLGGHILQSLDGFVFALNQE-GKFLYISET 165
Query 176 VFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLS--------------SSDTAPRERLID 221
V L SQ ++ G S+FDY+HP D ++V EQL SS ++ L D
Sbjct 166 VSIYLGLSQVEMTGSSVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVSSSSSSSSSLAD 225
Query 222 AKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKS--F 279
T + PS L RSFF RMK ST +K+ K+ +
Sbjct 226 TPEIEASLTKVP--PSSLVQ--ERSFFVRMK--------------STLTKRGLHVKASGY 267
Query 280 CTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSME 339
IH TG L++ + LVA+G H +P E+ +
Sbjct 268 KVIHVTGRLRA-------------------HALGLVALG----HTLPPAPLAELPLHGHM 304
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKI 399
V R ++ + + R + + P EL+G SCY++ H D + + H +L + ++
Sbjct 305 IVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQSHVDLLD-KGQV 363
Query 400 TTNCYKFKIKDGSFITLRS 418
T Y++ + G F+ L+S
Sbjct 364 MTGYYRWLQRAGGFVWLQS 382
>sp|Q24767|PER_DROYA Period circadian protein OS=Drosophila yakuba
OX=7245 GN=per PE=3 SV=1
Length=1208
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/312 (25%), Positives = 138/312 (44%), Gaps = 59/312 (19%)
Query 156 DGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAP 215
+ F V+ G +L+ + S+ +L Y ++ +G+S D++H KD A Q++
Sbjct 242 ESFCCVISMHDGIVLYTTPSITDVLGYPRDMWLGRSFIDFVHLKDRATFASQIT------ 295
Query 216 RERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKAD 275
TG+P+ P +S FC M +K
Sbjct 296 --------TGIPIAESRGSVPKDT-----KSTFCVMLRRYRGLK---------------- 326
Query 276 RKSFCTIHSTGYLKSWPPTKMGLD-----EDNEPDN----EGCNLSCLVAIGRLHS-HVV 325
F I G S+ P ++GL E+ PDN G N+ ++ + S + +
Sbjct 327 SGGFGVI---GRPVSYEPFRLGLTFREAPEEARPDNYMVSNGTNMLLVICATPIKSSYKI 383
Query 326 PQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
P + + KS ++ RH G VD A + L YLPQ+L+G S +++HQ+D+ +
Sbjct 384 PDEI---LSQKSPKFAIRHTATGIISHVDSAAVSALGYLPQDLIGRSIMDFYHQEDLSVM 440
Query 386 AECHRQVLQTRE----KITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 441
E + V++ + + Y+F I++G ++ L + W SF+NPW++++E++V + V
Sbjct 441 KETYEMVMKKGQTAGASFCSKPYRFLIQNGCYVLLETEWTSFVNPWSRKLEFVVGHHRVF 500
Query 442 LA----NVLEGG 449
NV E
Sbjct 501 QGPKSCNVFEAA 512
>sp|P07663|PER_DROME Period circadian protein OS=Drosophila melanogaster
OX=7227 GN=per PE=1 SV=2
Length=1224
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 137/312 (44%), Gaps = 59/312 (19%)
Query 156 DGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAP 215
D F V+ G +L+ + S+ +L Y ++ +G+S D++H KD A Q++
Sbjct 238 DSFCCVISMHDGIVLYTTPSITDVLGYPRDMWLGRSFIDFVHLKDRATFASQIT------ 291
Query 216 RERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKAD 275
TG+P+ P +S FC M +K
Sbjct 292 --------TGIPIAESRGSVPKDA-----KSTFCVMLRRYRGLK---------------- 322
Query 276 RKSFCTIHSTGYLKSWPPTKMGLD-----EDNEPDN----EGCNLSCLVAIGRLHS-HVV 325
F I G S+ P ++GL E+ PDN G N+ ++ + S + V
Sbjct 323 SGGFGVI---GRPVSYEPFRLGLTFREAPEEARPDNYMVSNGTNMLLVICATPIKSSYKV 379
Query 326 PQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
P + + KS ++ RH G VD A + L YLPQ+L+G S +++H +D+ +
Sbjct 380 PDEI---LSQKSPKFAIRHTATGIISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVM 436
Query 386 AECHRQVLQTRE----KITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 441
E + V++ + + Y+F I++G ++ L + W SF+NPW++++E++V + V
Sbjct 437 KETYETVMKKGQTAGASFCSKPYRFLIQNGCYVLLETEWTSFVNPWSRKLEFVVGHHRVF 496
Query 442 LA----NVLEGG 449
NV E
Sbjct 497 QGPKQCNVFEAA 508
>sp|P12348|PER_DROPS Period circadian protein OS=Drosophila pseudoobscura
pseudoobscura OX=46245 GN=per PE=3 SV=3
Length=1271
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/319 (23%), Positives = 133/319 (42%), Gaps = 77/319 (24%)
Query 156 DGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAP 215
D F V+ G +L+ + S+ +L + ++ +G+S D++H KD A Q++
Sbjct 200 DSFCCVISMHDGIVLYTTPSITDVLGFPRDMWLGRSFIDFVHTKDRATFASQIT------ 253
Query 216 RERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKAD 275
TG+P+ S CS K
Sbjct 254 --------TGIPIAE------------------------------------SRCSMPKDA 269
Query 276 RKSFCT-------IHSTGY-----LKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSH 323
R +FC + ++GY ++ P ++G+ P+ E + + +
Sbjct 270 RSTFCVMLRQYRGLQTSGYGVIGRSVNYEPFRLGMSFREAPEEERSDNYMVANSSNMLLV 329
Query 324 VVPQPVNGEIRV-------KSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEY 376
+ P+ RV +S ++ RH G VD A + L YLPQ+L+G S +
Sbjct 330 ICATPIKSSYRVPEEIHSQRSPKFAIRHTAAGIISHVDSAAVSALGYLPQDLMGRSIMDL 389
Query 377 FHQDDIGHLAECHRQVLQTRE----KITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVE 432
+H DD+ + E + V++ + + Y+F I++G +I L + W SF+NPW++++E
Sbjct 390 YHHDDLPVIKEIYESVMKKGQTAGASFCSKPYRFLIQNGCYILLETEWSSFVNPWSRKLE 449
Query 433 YIVSTNTVV----LANVLE 447
++V + V + NV E
Sbjct 450 FVVGHHRVFQGPKICNVFE 468
>sp|Q03297|PER_DROWI Period circadian protein (Fragment) OS=Drosophila
willistoni OX=7260 GN=per PE=3 SV=2
Length=1093
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/321 (25%), Positives = 144/321 (45%), Gaps = 61/321 (19%)
Query 156 DGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAP 215
+ F V+ G +L+ + S+ +L + ++ +G+S D++H KD A Q++
Sbjct 150 ESFCCVISMHDGIVLYTTPSISDVLGFPRDMWLGRSFVDFVHHKDRATFASQIT------ 203
Query 216 RERLIDAKTGLPVKTDITPGPSRLCSGA-RRSFFCRMKCNRPSVKVEDKDFPSTCSKKKA 274
TG+P+ SR C RS FC M +
Sbjct 204 --------TGIPI------AESRGCMPKDARSTFCVMLRRY----------------RGL 233
Query 275 DRKSFCTIHSTGYLKSWPPTKMGLD-----EDNEPDN----EGCNLSCLVAIGRLHS-HV 324
+ F I G ++ P ++GL E+ PDN G N+ ++ + S +
Sbjct 234 NSGGFGVI---GRAVNYEPFRLGLTFREAPEEARPDNYMVSNGTNMLLVICATPIKSSYK 290
Query 325 VPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGH 384
VP + + KS ++ RH G VD A + L YLPQ+L+G S +++H +D+
Sbjct 291 VPDEI---LSQKSPKFAIRHTATGIISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSV 347
Query 385 LAECHRQVLQTRE----KITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTV 440
+ + + V++ + + Y+F I++G F+ L + W SF+NPW++++E++V + V
Sbjct 348 MKDTYETVMKKGQTAGASFCSKPYRFLIQNGCFVLLETEWTSFVNPWSRKLEFVVGHHRV 407
Query 441 V----LANVLEGGDPTFPQLT 457
L NV E P+++
Sbjct 408 FQGPKLCNVFETSVSAKPKIS 428
>sp|Q03355|PER_DROSI Period circadian protein (Fragments) OS=Drosophila
simulans OX=7240 GN=per PE=3 SV=2
Length=656
Score = 104 bits (259), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 137/312 (44%), Gaps = 59/312 (19%)
Query 156 DGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAP 215
D F V+ G +L+ + S+ +L Y ++ +G+S D++H KD A Q++
Sbjct 224 DSFCCVISMHDGIVLYTTPSITDVLGYPRDMWLGRSFIDFVHLKDRATFASQIT------ 277
Query 216 RERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKAD 275
TG+P+ P +S FC M +K
Sbjct 278 --------TGIPIAESRGSVPKDA-----KSTFCVMLRRYRGLK---------------- 308
Query 276 RKSFCTIHSTGYLKSWPPTKMGLD-----EDNEPDN----EGCNLSCLVAIGRLHS-HVV 325
F I G S+ P ++GL E+ PDN G N+ ++ + S + V
Sbjct 309 SGGFGVI---GRPVSYEPFRLGLTFREAPEEARPDNYMVSNGTNMLLVICATPIKSSYKV 365
Query 326 PQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
P + + KS ++ RH G VD A + L YLPQ+L+G S +++H +D+ +
Sbjct 366 PDEI---LSQKSPKFAIRHTATGIISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVM 422
Query 386 AECHRQVLQTRE----KITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 441
E + V++ + + Y+F I++G ++ L + W SF+NPW++++E++V + V
Sbjct 423 KETYETVMKKGQTAGASFCSKPYRFLIQNGCYVLLETEWTSFVNPWSRKLEFVVGHHRVF 482
Query 442 LA----NVLEGG 449
NV E
Sbjct 483 QGPKQCNVFEAA 494
>sp|Q03353|PER_DROMA Period circadian protein (Fragments) OS=Drosophila
mauritiana OX=7226 GN=per PE=3 SV=2
Length=676
Score = 104 bits (259), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 137/312 (44%), Gaps = 59/312 (19%)
Query 156 DGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAP 215
D F V+ G +L+ + S+ +L Y ++ +G+S D++H KD A Q++
Sbjct 224 DSFCCVISMHDGIVLYTTPSITDVLGYPRDMWLGRSFIDFVHLKDRATFASQIT------ 277
Query 216 RERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKAD 275
TG+P+ P +S FC M +K
Sbjct 278 --------TGIPIAESRGSVPKDA-----KSTFCVMLRRYRGLK---------------- 308
Query 276 RKSFCTIHSTGYLKSWPPTKMGLD-----EDNEPDN----EGCNLSCLVAIGRLHS-HVV 325
F I G S+ P ++GL E+ PDN G N+ ++ + S + V
Sbjct 309 SGGFGVI---GRPVSYEPFRLGLTFREAPEEARPDNYMVSNGTNMLLVICATPIKSSYKV 365
Query 326 PQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
P + + KS ++ RH G VD A + L YLPQ+L+G S +++H +D+ +
Sbjct 366 PDEI---LSQKSPKFAIRHTATGIISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVM 422
Query 386 AECHRQVLQTRE----KITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 441
E + V++ + + Y+F I++G ++ L + W SF+NPW++++E++V + V
Sbjct 423 KETYETVMKKGQTAGASFCSKPYRFLIQNGCYVLLETEWTSFVNPWSRKLEFVVGHHRVF 482
Query 442 LA----NVLEGG 449
NV E
Sbjct 483 QGPKQCNVFEAA 494
>sp|Q03354|PER_DROSE Period circadian protein (Fragments) OS=Drosophila
sechellia OX=7238 GN=per PE=3 SV=2
Length=661
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 137/312 (44%), Gaps = 59/312 (19%)
Query 156 DGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAP 215
D F V+ G +L+ + S+ +L Y ++ +G+S D++H KD A Q++
Sbjct 223 DSFCCVISMHDGIVLYTTPSITDVLGYPRDMWLGRSFIDFVHLKDRATFASQIT------ 276
Query 216 RERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKAD 275
TG+P+ P +S FC M +K
Sbjct 277 --------TGIPIAESRGSVPKDA-----KSTFCVMLRRYRGLK---------------- 307
Query 276 RKSFCTIHSTGYLKSWPPTKMGLD-----EDNEPDN----EGCNLSCLVAIGRLHS-HVV 325
F I G S+ P ++GL E+ PDN G N+ ++ + S + V
Sbjct 308 SGGFGVI---GRPVSYEPFRLGLTFREAPEEARPDNYMVSNGTNMLLVICATPIKSSYKV 364
Query 326 PQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
P + + KS ++ RH G VD A + L YLPQ+L+G S +++H +D+ +
Sbjct 365 PDEI---LSQKSPKFAIRHTATGIISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVM 421
Query 386 AECHRQVLQTRE----KITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 441
E + V++ + + Y+F I++G ++ L + W SF+NPW++++E++V + V
Sbjct 422 KETYETVMKKGQTAGASFCSKPYRFLIQNGCYVLLETEWTSFVNPWSRKLEFVVGHHRVF 481
Query 442 LA----NVLEGG 449
NV E
Sbjct 482 QGPKQCNVFEAA 493
>sp|Q8R4S6|AHR_MUSMC Aryl hydrocarbon receptor OS=Mus musculus
castaneus OX=10091 GN=Ahr PE=2 SV=1
Length=848
Score = 101 bits (251), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 158/356 (44%), Gaps = 54/356 (15%)
Query 82 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL-------------RGA 128
KR RD++N+ +D LASL+P + KLDKL+VLR++V +++ R
Sbjct 36 KRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSTPADRNG 95
Query 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
A + D + +L+A +GF+ VV D + + S ++ L + Q+D+I
Sbjct 96 GQDQCRAQIRD--WQDLQEGEFLLQALNGFVLVVTAD-ALVFYASSTIQDYLGFQQSDVI 152
Query 189 GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLP-VKTDITPG--PSRLCSGARR 245
QS+++ +H +D A+ + QL + + +D G P TP P S R
Sbjct 153 HQSVYELIHTEDRAEFQRQLHWALNPDSAQGVDEAHGPPQAAVYYTPDQLPPENASFMER 212
Query 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPD 305
F CR++C + D + F ++ G LK L N+
Sbjct 213 CFRCRLRC------LLD------------NSSGFLAMNFQGRLKY-------LHGQNKKG 247
Query 306 NEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLP 365
+G L +A+ + + + P P EIR K+ + ++H +D + D + IL Y
Sbjct 248 KDGALLPPQLALFAIATPLQP-PSILEIRTKNFIFRTKHKLDFTPIGCDAKGQLILGYTE 306
Query 366 QELLGT-SCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
EL S Y++ H D+ H AE H ++++T E T F++ + SRW
Sbjct 307 VELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMT---VFRL-----LAKHSRW 354
>sp|P30561|AHR_MOUSE Aryl hydrocarbon receptor OS=Mus musculus
OX=10090 GN=Ahr PE=1 SV=3
Length=848
Score = 100 bits (250), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 150/333 (45%), Gaps = 46/333 (14%)
Query 82 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL-------------RGA 128
KR RD++N+ +D LASL+P + KLDKL+VLR++V +++ R
Sbjct 36 KRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSTPADRNG 95
Query 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
A + D + +L+A +GF+ VV D + + S ++ L + Q+D+I
Sbjct 96 GQDQCRAQIRD--WQDLQEGEFLLQALNGFVLVVTAD-ALVFYASSTIQDYLGFQQSDVI 152
Query 189 GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLP-VKTDITPG--PSRLCSGARR 245
QS+++ +H +D A+ + QL + + +D G P TP P S R
Sbjct 153 HQSVYELIHTEDRAEFQRQLHWALNPDSAQGVDEAHGPPQAAVYYTPDQLPPENASFMER 212
Query 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPD 305
F CR++C + D + F ++ G LK L N+
Sbjct 213 CFRCRLRC------LLD------------NSSGFLAMNFQGRLKY-------LHGQNKKG 247
Query 306 NEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLP 365
+G L +A+ + + + P P EIR K+ + ++H +D + D + IL Y
Sbjct 248 KDGALLPPQLALFAIATPLQP-PSILEIRTKNFIFRTKHKLDFTPIGCDAKGQLILGYTE 306
Query 366 QELLGT-SCYEYFHQDDIGHLAECHRQVLQTRE 397
EL S Y++ H D+ H AE H ++++T E
Sbjct 307 VELCTRGSGYQFIHAADMLHCAESHIRMIKTGE 339
>sp|P12349|PER_DROVI Period circadian protein OS=Drosophila virilis
OX=7244 GN=per PE=3 SV=1
Length=1087
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/310 (24%), Positives = 135/310 (44%), Gaps = 77/310 (25%)
Query 156 DGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAP 215
D F V+ G +LF + ++ ++L Y + +G+S D++H KD A Q++
Sbjct 220 DSFCCVISMHDGVVLFTTANLNEMLGYPREMWLGRSFIDFVHIKDRATFASQIT------ 273
Query 216 RERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKAD 275
TG+P+ S CS+ K
Sbjct 274 --------TGIPIAE------------------------------------SRCSQSKDA 289
Query 276 RKSFCTIHS------------TGYLKSWPPTKMGLD-----EDNEPDNEGCNLSCLVAIG 318
R +FC + G S+ P ++GL E+ +PD GC LS ++
Sbjct 290 RTTFCVMLRRYRGLASGGFGIIGRPVSYAPFRLGLTFREAPEEVQPD--GCTLSNATSML 347
Query 319 RLHSHVVPQPVNGE----IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCY 374
+ S + E + K ++ +H G VD A + L YLPQ+L+G S
Sbjct 348 LVISATPIKSCYKEPDEFLSPKGPKFAIQHTAAGIISHVDTAAVSALGYLPQDLIGRSIL 407
Query 375 EYFHQDDIGHLAECHRQVLQTREKI-TTNC---YKFKIKDGSFITLRSRWFSFMNPWTKE 430
+++H +D+ + + + +V++ + + T C ++F I++G +I L + W SF+NPW+++
Sbjct 408 DFYHHEDLSDIKDIYEKVVKKGQTVGATFCSKPFRFLIQNGCYILLETEWTSFVNPWSRK 467
Query 431 VEYIVSTNTV 440
+E++V + V
Sbjct 468 LEFVVGHHRV 477
>sp|Q8R4S5|AHR_MUSMM Aryl hydrocarbon receptor OS=Mus musculus
molossinus OX=57486 GN=Ahr PE=2 SV=1
Length=883
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 158/356 (44%), Gaps = 54/356 (15%)
Query 82 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL-------------RGA 128
KR RD++N+ +D LASL+P + KLDKL+VLR++V +++ R
Sbjct 36 KRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSTPADRNG 95
Query 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
A + D + +L+A +GF+ VV D + + S ++ L + Q+D+I
Sbjct 96 GQDQCRAQIRD--WQDLQEGEFLLQALNGFVLVVTAD-ALVFYASSTIQDYLGFQQSDVI 152
Query 189 GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLP-VKTDITPG--PSRLCSGARR 245
QS+++ +H +D A+ + QL + + +D G P TP P S R
Sbjct 153 HQSVYELIHTEDRAEFQRQLHWALNPDSAQGVDEAHGPPQAAVYYTPDQLPPENASFMER 212
Query 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPD 305
F CR++C + D + F ++ G LK L N+
Sbjct 213 CFRCRLRC------LLD------------NSSGFLAMNFQGRLKY-------LHGQNKKG 247
Query 306 NEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLP 365
+G L +A+ + + + P P EIR K+ + ++H +D + D + IL Y
Sbjct 248 KDGALLPPQLALFAIATPLQP-PSILEIRTKNFIFRTKHKLDFTPIGCDAKGQLILGYTE 306
Query 366 QELLGT-SCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
EL S Y++ H D+ H AE H ++++T E T F++ + SRW
Sbjct 307 VELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMT---VFRL-----LAKHSRW 354
>sp|Q24167|SIMA_DROME Protein similar OS=Drosophila melanogaster
OX=7227 GN=sima PE=1 SV=2
Length=1507
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 155/360 (43%), Gaps = 68/360 (19%)
Query 84 RRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMK---------TLRGATNPYTE 134
RR K EL++ +P +LDK +V+R+ + +K +LR + +
Sbjct 84 RRSKETEIFMELSAALPLKTDDVNQLDKASVMRITIAFLKIREMLQFVPSLRDCNDDIKQ 143
Query 135 --------ANYKPT-------FLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKI 179
KP +L+ E + L+ + DGFL V+ G I +VSE+V +
Sbjct 144 DIETAEDQQEVKPKLEVGTEDWLNGAEARELLKQTMDGFLLVLS-HEGDITYVSENVVEY 202
Query 180 LNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRL 239
L ++ D +GQ +++Y H D A++KE LS K L K P +
Sbjct 203 LGITKIDTLGQQIWEYSHQCDHAEIKEALS------------LKRELAQKVKDEPQQNSG 250
Query 240 CSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLD 299
S R F R+KC S S+ IH TG+L
Sbjct 251 VSTHHRDLFVRLKCT----------LTSRGRSINIKSASYKVIHITGHLVV--------- 291
Query 300 EDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATA 359
+ +G L L+AIGR +P P N EI + + ++++H++D +F +VD +
Sbjct 292 -----NAKGERL--LMAIGR----PIPHPSNIEIPLGTSTFLTKHSLDMRFTYVDDKMHD 340
Query 360 ILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSR 419
+L Y P++LL TS + H D L + VL ++ + T+ Y+F K G + + S+
Sbjct 341 LLGYSPKDLLDTSLFSCQHGADSERLMATFKSVL-SKGQGETSRYRFLGKYGGYCWILSQ 399
>sp|Q25637|PER_PERAM Period circadian protein OS=Periplaneta americana
OX=6978 GN=per PE=2 SV=2
Length=893
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/289 (25%), Positives = 126/289 (44%), Gaps = 31/289 (11%)
Query 158 FLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRE 217
F VV G ++F + S+ ++ + ++ +G+S D++HP+D ++S P
Sbjct 230 FCVVVSMQDGVVVFTTPSITDVVGFPKDMWLGRSFIDFVHPRDRTAFANHITSGVITP-- 287
Query 218 RLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRK 277
L ++ K PG + SF+C ++ R ST
Sbjct 288 -LSNSNP----KGGSHPG--------KNSFYCCLRRYR--------GLKSTGYGVTEKEV 326
Query 278 SFCTIHSTGYLKSWPPTKMGLDEDNEPDNE----GCNLSCLVAIGRLHSHVVPQPVNGEI 333
S+ + P L+ + E GCN LV +L GE
Sbjct 327 SYLPFQLNMTFRELLPHSNPLEVEGNTSPESVPGGCNSMFLVITAKLICSAYKHA--GET 384
Query 334 RVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVL 393
S ++V+RH K +VD L YLP E+LG S +++H +D+ L E ++ V+
Sbjct 385 -CASPKFVTRHLATCKLNYVDPECMPYLGYLPHEMLGNSVLDFYHPEDLPFLKEVYQIVM 443
Query 394 QTR-EKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 441
Q + Y+F+ +G +I L + W SF+NPW+K++E++V + V+
Sbjct 444 QENGAPFRSKPYRFRSHNGGYILLETEWSSFVNPWSKKLEFVVGQHRVL 492
>sp|P41738|AHR_RAT Aryl hydrocarbon receptor OS=Rattus norvegicus
OX=10116 GN=Ahr PE=1 SV=2
Length=853
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/358 (26%), Positives = 160/358 (45%), Gaps = 52/358 (15%)
Query 82 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMK-----------TLRGATN 130
KR RD++N+ +D LASL+P + KLDKL+VLR++V +++ T +
Sbjct 36 KRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSTPADRSR 95
Query 131 PYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQ 190
+ + D + +L+A +GF+ VV D + + S ++ L + Q+D+I Q
Sbjct 96 GQDQCRAQVRDWQDLQEGEFLLQALNGFVLVVTAD-ALVFYASSTIQDYLGFQQSDVIHQ 154
Query 191 SLFDYLHPKDIAKVKEQ----LSSSDTAPRERLIDAKTGLPV-KTDITPG--PSRLCSGA 243
S+++ +H +D A+ + Q L+ S + +D GLP TP P +
Sbjct 155 SVYELIHTEDRAEFQRQLHWALNPSQCTDSAQGVDETHGLPQPAVYYTPDQLPPENTAFM 214
Query 244 RRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNE 303
R F CR++C + D + F ++ G LK L N+
Sbjct 215 ERCFRCRLRC------LLD------------NSSGFLAMNFQGRLKY-------LHGQNK 249
Query 304 PDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAY 363
+G L +A+ + + + P P EIR K+ + ++H +D + D + IL Y
Sbjct 250 KGKDGALLPPQLALFAIATPLQP-PSILEIRTKNFIFRTKHKLDFTPIGCDAKGQLILGY 308
Query 364 LPQELLGT-SCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
EL S Y++ H D+ H AE H ++++T E T ++ K R RW
Sbjct 309 TEVELCNKGSGYQFIHAADMLHCAESHIRMIKTGESGMT-VFRLLAKHS-----RWRW 360
>sp|O02747|AHR_RABIT Aryl hydrocarbon receptor OS=Oryctolagus
cuniculus OX=9986 GN=AHR PE=2 SV=1
Length=847
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/359 (26%), Positives = 159/359 (44%), Gaps = 54/359 (15%)
Query 82 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT--------------LRG 127
KR RD++N+ +D LASL+P + KLDKL+VLR++V +++ G
Sbjct 37 KRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSSADRNG 96
Query 128 ATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDL 187
+P + L + E +L+A +GF+ VV D + + S ++ L + Q+D+
Sbjct 97 GQDPCRAKFGEGLNLQEGE---FLLQALNGFVLVVTVD-ALVFYASSTIQDYLGFQQSDV 152
Query 188 IGQSLFDYLHPKDIAKVKEQLS-----SSDTAPRERLIDAKTGLPVKTDITPG--PSRLC 240
I QS+++ +H +D A+ + QL S T P + D GLP P P
Sbjct 153 IHQSVYELIHTEDRAEFQRQLHWALNPSQCTDPGQG-ADETHGLPQPVYYNPDQLPPENS 211
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
S R F CR++C + F ++ G LK L
Sbjct 212 SFMERCFICRLRC------------------LLDNSSGFLAMNFQGRLKF-------LHG 246
Query 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
N+ +G L +A+ + + + P P EIR K+ + ++H +D D + +
Sbjct 247 QNKKGKDGSLLPPQLALFAIATPLQP-PSILEIRTKNFIFRTKHKLDFTPTGCDAKGQIV 305
Query 361 LAYLPQEL-LGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRS 418
L Y EL + S Y++ H D+ + AE H ++++T E ++ KD + ++S
Sbjct 306 LGYTEAELCMRGSGYQFIHAADMLYCAESHIRMIKTGES-GLAVFRLLTKDNRWAWVQS 363
>sp|Q8R4S4|AHR_MUSSI Aryl hydrocarbon receptor OS=Mus spicilegus
OX=10103 GN=Ahr PE=2 SV=1
Length=854
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 159/360 (44%), Gaps = 58/360 (16%)
Query 82 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL-------------RGA 128
KR RD++N+ +D LASL+P + KLDKL+VLR++V +++ R
Sbjct 36 KRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSTPADRNG 95
Query 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
A + D + +L+A +GF+ VV D + + S ++ L + Q+D+I
Sbjct 96 GQDQCRAQIRD--WQDLQEGEFLLQALNGFVLVVTAD-ALVFYASSTIQDYLGFQQSDVI 152
Query 189 GQSLFDYLHPKDIAKVKEQ----LSSSDTAPRERLIDAKTGLP-VKTDITPG--PSRLCS 241
QS+++ +H +D A+ + Q L+ S + +D G P TP P S
Sbjct 153 HQSVYELIHTEDRAEFQRQLHWALNPSQCTDSAQGVDEAHGPPQAAVYYTPDQLPPENAS 212
Query 242 GARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDED 301
R F CR++C + D + F ++ G LK L
Sbjct 213 FMERCFRCRLRC------LLD------------NSSGFLAMNFQGRLKY-------LHGQ 247
Query 302 NEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAIL 361
N+ +G L +A+ + + + P P EIR K+ + ++H +D + D + IL
Sbjct 248 NKKGKDGALLPPQLALFAIATPLQP-PSILEIRTKNFIFRTKHKLDFTPIGCDAKGQLIL 306
Query 362 AYLPQELLGT-SCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
Y EL S Y++ H D+ H AE H ++++T E T F++ + SRW
Sbjct 307 GYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMT---VFRL-----LAKHSRW 358
>sp|Q8R4S7|AHR_MUSCR Aryl hydrocarbon receptor OS=Mus caroli OX=10089
GN=Ahr PE=2 SV=1
Length=854
Score = 98.2 bits (243), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 161/361 (45%), Gaps = 60/361 (17%)
Query 82 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL-------------RGA 128
KR RD++N+ +D LASL+P + KLDKL+VLR++V +++ R
Sbjct 36 KRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSTPADRNG 95
Query 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
A + D + +L+A +GF+ VV D + + S ++ L + Q+D+I
Sbjct 96 GQDQCRAQIRD--WQDLQEGEFLLQALNGFVLVVTAD-ALVFYASSTIQDYLGFQQSDVI 152
Query 189 GQSLFDYLHPKDIAKVKEQ----LSSSDTAPRERLIDAKTGLPVKTDITPGPSRL----C 240
QS+++ +H +D A+ + Q L+ S + +D G P +T + P +L
Sbjct 153 HQSVYELIHTEDRAEFQRQLHWALNPSQCTDSAQGVDEAHG-PPQTAVYYTPDQLPPENA 211
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
S R F CR++C + D + F ++ G LK L
Sbjct 212 SFMERCFRCRLRC------LLD------------NSSGFLAMNFQGRLKY-------LHG 246
Query 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
N+ +G L +A+ + + + P P EIR K+ + ++H +D D + I
Sbjct 247 QNKKGKDGALLPPQLALFAIATPLQP-PSILEIRTKNFIFRTKHKLDFTPSGCDAKGQLI 305
Query 361 LAYLPQELLGT-SCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSR 419
L Y EL S Y++ H D+ H AE H ++++T E T F++ + SR
Sbjct 306 LGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMT---VFRL-----LAKHSR 357
Query 420 W 420
W
Sbjct 358 W 358
>sp|P35869|AHR_HUMAN Aryl hydrocarbon receptor OS=Homo sapiens
OX=9606 GN=AHR PE=1 SV=2
Length=848
Score = 97.4 bits (241), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/340 (26%), Positives = 156/340 (46%), Gaps = 55/340 (16%)
Query 82 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT--------------LRG 127
KR RD++N+ +D LASL+P + KLDKL+VLR++V +++ G
Sbjct 37 KRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPTERNG 96
Query 128 ATNPYTEANYKPTF-LSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQND 186
+ AN++ L + E +L+A +GF+ VV D + + S ++ L + Q+D
Sbjct 97 GQDNCRAANFREGLNLQEGE---FLLQALNGFVLVVTTD-ALVFYASSTIQDYLGFQQSD 152
Query 187 LIGQSLFDYLHPKDIAKVKEQ----LSSSDTAPRERLIDAKTGLPVKTDITPGPSRL--- 239
+I QS+++ +H +D A+ + Q L+ S + I+ TGLP +T + P ++
Sbjct 153 VIHQSVYELIHTEDRAEFQRQLHWALNPSQCTESGQGIEEATGLP-QTVVCYNPDQIPPE 211
Query 240 -CSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGL 298
R F CR++C + F ++ G LK L
Sbjct 212 NSPLMERCFICRLRC------------------LLDNSSGFLAMNFQGKLKY-------L 246
Query 299 DEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRAT 358
+ +G L +A+ + + + P P EIR K+ + ++H +D + D +
Sbjct 247 HGQKKKGKDGSILPPQLALFAIATPLQP-PSILEIRTKNFIFRTKHKLDFTPIGCDAKGR 305
Query 359 AILAYLPQELLGT-SCYEYFHQDDIGHLAECHRQVLQTRE 397
+L Y EL S Y++ H D+ + AE H ++++T E
Sbjct 306 IVLGYTEAELCTRGSGYQFIHAADMLYCAESHIRMIKTGE 345
>sp|O70361|PER3_MOUSE Period circadian protein homolog 3 OS=Mus
musculus OX=10090 GN=Per3 PE=1 SV=2
Length=1113
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/289 (26%), Positives = 125/289 (43%), Gaps = 50/289 (17%)
Query 156 DGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAP 215
D F V G+++ +SE ILN + L D L P+D+ + TAP
Sbjct 130 DTFAAVFSFLSGRLVHISEQAALILNSKRGFLKSVHFVDLLAPQDVRAFY-----AHTAP 184
Query 216 RERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKAD 275
T LP + T S+ + FFCR+ C +
Sbjct 185 --------TQLPFWNNWTQRASQYECAPAKPFFCRI-----------------CGGGDRE 219
Query 276 RKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHS-HVVPQ-PVNGEI 333
++ + YL + + +P+ E C CL + ++HS + P+ PV+ I
Sbjct 220 KRHYSPFRILPYL-------VHVHSSAQPEPEPC---CLTLVEKIHSGYEAPRIPVDKRI 269
Query 334 RVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVL 393
+ + H F+ VD+RA +L YLPQ+L+GTS Y H +D + H++VL
Sbjct 270 ------FTTTHTPGCVFLEVDERAVPLLGYLPQDLIGTSILTYLHPEDRPLMVAIHQKVL 323
Query 394 QT--REKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTV 440
+ + +F ++G ++ L S W SF+NPW+++V +I+ + V
Sbjct 324 KYAGHPPFEHSPVRFCTQNGEYVILDSSWSSFVNPWSRKVSFIIGRHKV 372
>sp|Q95LD9|AHR_DELLE Aryl hydrocarbon receptor OS=Delphinapterus
leucas OX=9749 GN=AHR PE=2 SV=1
Length=845
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 161/356 (45%), Gaps = 47/356 (13%)
Query 82 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMK-------TLRG--ATNPY 132
KR RD++N+ +D LASL+P + KLDKL+VLR++V +++ L+ A
Sbjct 37 KRHRDRLNTELDRLASLLPFPQDVVNKLDKLSVLRLSVSYLRAKSFFDVALKSTPADRNG 96
Query 133 TEANYKPTFLSDDELK--HLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQ 190
+ N + F L+ +L+A +GF+ VV D + + S ++ L + Q+D+I Q
Sbjct 97 VQDNCRTKFREGLNLQEGEFLLQALNGFVLVVTTD-ALVFYASSTIQDYLGFQQSDVIHQ 155
Query 191 SLFDYLHPKDIAKVKEQ----LSSSDTAPRERLIDAKTGL---PVKTDITPGPSRLCSGA 243
S+++ +H +D A+ + Q L+ S + +D GL V + P S
Sbjct 156 SVYELIHTEDRAEFQRQLHWALNPSQCPDSGQKMDEANGLSQPAVYYNPDQVPPENSSSM 215
Query 244 RRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNE 303
R F CR++C + F ++ G LK L N+
Sbjct 216 ERCFVCRLRC------------------LLDNSSGFLAMNFQGRLKY-------LHGQNK 250
Query 304 PDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAY 363
+G L +A+ + + + P P EIR K+ + ++H +D D + +L Y
Sbjct 251 KGKDGSILPPQLALFAIATPLQP-PSILEIRTKNFIFRTKHKLDFTPTGCDAKGRIVLGY 309
Query 364 LPQEL-LGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRS 418
EL + S Y++ H D+ + AE H ++++T E ++ KD + ++S
Sbjct 310 TEAELCMRGSGYQFIHAADMLYCAEYHIRMIKTGESGLI-VFRLLTKDNRWTWVQS 364
>sp|Q8R4S2|AHR_MUSSP Aryl hydrocarbon receptor OS=Mus spretus
OX=10096 GN=Ahr PE=2 SV=1
Length=854
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/360 (26%), Positives = 159/360 (44%), Gaps = 58/360 (16%)
Query 82 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL-------------RGA 128
KR RD++N+ +D LASL+P + KLDKL+VLR++V +++ R
Sbjct 36 KRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSTPADRNG 95
Query 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
A + + + +L+A +GF+ VV D + + S ++ L + Q+D+I
Sbjct 96 GQDQCRAQIRD--WQNLQEGEFLLQALNGFVLVVTAD-ALVFYASSTIQDYLGFQQSDVI 152
Query 189 GQSLFDYLHPKDIAKVKEQL----SSSDTAPRERLIDAKTGLP-VKTDITPG--PSRLCS 241
QS+++ +H +D A+ + QL + S + +D G P TP P S
Sbjct 153 HQSVYELIHTEDRAEFQRQLHWALNPSQCTDSAQGVDEAHGPPQAAVYYTPDQLPPENAS 212
Query 242 GARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDED 301
R F CR++C + D + F ++ G LK L
Sbjct 213 FMERCFRCRLRC------LLD------------NSSGFLAMNFQGRLKY-------LHGQ 247
Query 302 NEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAIL 361
N+ +G L +A+ + + + P P EIR K+ + ++H +D + D + IL
Sbjct 248 NKKGKDGALLPPQLALFAIATPLQP-PSILEIRTKNFIFRTKHKLDFTPIGCDAKGQLIL 306
Query 362 AYLPQELLGT-SCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
Y EL S Y++ H D+ H AE H ++++T E T F++ + SRW
Sbjct 307 GYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMT---VFRL-----LAKHSRW 358
>sp|P56645|PER3_HUMAN Period circadian protein homolog 3 OS=Homo
sapiens OX=9606 GN=PER3 PE=1 SV=4
Length=1201
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 129/294 (44%), Gaps = 51/294 (17%)
Query 153 RAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSD 212
+ D F+ V G+++ +SE ILN ++ L D L P+D+
Sbjct 128 KNTDTFVAVFSFLSGRLVHISEQAALILNRKKDVLASSHFVDLLAPQDMRVFYAH----- 182
Query 213 TAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKK 272
A+ LP + T +R + FFCR++ ED+ K+
Sbjct 183 --------TARAQLPFWNNWTQRAARYECAPVKPFFCRIRGG------EDR-------KQ 221
Query 273 KADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPD--NEGCNLSCLVAIGRLHS-HVVPQ-P 328
+ F I P + + +P+ +E C CL + ++HS + P+ P
Sbjct 222 EKCHSPFRII----------PYLIHVHHPAQPELESEPC---CLTVVEKIHSGYEAPRIP 268
Query 329 VNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAEC 388
VN I + + H F+ VD++A +L YLPQ+L+GTS Y H +D +
Sbjct 269 VNKRI------FTTTHTPGCVFLEVDEKAVPLLGYLPQDLIGTSILSYLHPEDRSLMVAI 322
Query 389 HRQVLQT--REKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTV 440
H++VL+ + +F ++G +I L S W SF+NPW++++ +I+ + V
Sbjct 323 HQKVLKYAGHPPFEHSPIRFCTQNGDYIILDSSWSSFVNPWSRKISFIIGRHKV 376
>sp|Q9Y6Q9|NCOA3_HUMAN Nuclear receptor coactivator 3 OS=Homo
sapiens OX=9606 GN=NCOA3 PE=1 SV=1
Length=1424
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/373 (26%), Positives = 158/373 (42%), Gaps = 56/373 (15%)
Query 81 EKRRRDKMNSFIDELASLVPT----CNAMSRKLDKLTVLRMAVQHMKTLR--GAT----N 130
EKRRR++ + +I+ELA L+ + + K DK +L+ V+ ++ ++ G T +
Sbjct 34 EKRRREQESKYIEELAELISANLSDIDNFNVKPDKCAILKETVRQIRQIKEQGKTISNDD 93
Query 131 PYTEANYKPT---FLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDL 187
+A+ T + D L L+L+A DGFLFVV D G I+FVSE+V + L Y Q DL
Sbjct 94 DVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRD-GNIVFVSENVTQYLQYKQEDL 152
Query 188 IGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSF 247
+ S+++ LH +D + L S G+ + S +F
Sbjct 153 VNTSVYNILHEEDRKDFLKNLPKSTV----------NGVSWTNETQRQKS-------HTF 195
Query 248 FCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNE 307
CRM P +ED + ++ + F S P M ED +
Sbjct 196 NCRMLMKTPHDILEDINASPEMRQRYETMQCFAL--------SQPRAMMEEGEDLQ---- 243
Query 308 GCNLSCLVAIG-RLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQ 366
SC++ + R+ + P N E +++RH + GK V +D +
Sbjct 244 ----SCMICVARRITTGERTFPSNPE------SFITRHDLSGKVVNIDTNSLRSSMRPGF 293
Query 367 ELLGTSCYEYFHQDDIGH--LAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFM 424
E + C + F + G + H Q T Y+F + DG+ +T +++ F
Sbjct 294 EDIIRRCIQRFFSLNDGQSWSQKRHYQEAYLNGHAETPVYRFSLADGTIVTAQTKSKLFR 353
Query 425 NPWTKEVEYIVST 437
NP T + VST
Sbjct 354 NPVTNDRHGFVST 366
>sp|O54943|PER2_MOUSE Period circadian protein homolog 2 OS=Mus
musculus OX=10090 GN=Per2 PE=1 SV=3
Length=1257
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 128/300 (43%), Gaps = 61/300 (20%)
Query 151 ILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSS 210
I++ AD F V GKIL++S V I + ++ ++L P D++ +
Sbjct 184 IVKNADMFAVAVSLVSGKILYISNQVASIFHCKKDAFSDAKFVEFLAPHDVS-----VFH 238
Query 211 SDTAPRERLIDAKTGLPVKTDITPGPSRLCSG---------ARRSFFCRMKCNRPSVKVE 261
S T P + LP P +CSG +SFFCR+
Sbjct 239 SYTTPYK--------LP--------PWSVCSGLDSFTQECMEEKSFFCRV---------- 272
Query 262 DKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLH 321
+ K + + T YL + + E +++ C CL+ R+H
Sbjct 273 ------SVGKHHENEIRYQPFRMTPYL-------VKVQEQQGAESQLC---CLLLAERVH 316
Query 322 SHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDD 381
S + E R+ + + H + F VD+RA +L YLPQ+L+ T H D
Sbjct 317 SGYEAPRIPPEKRI----FTTTHTPNCLFQAVDERAVPLLGYLPQDLIETPVLVQLHPSD 372
Query 382 IGHLAECHRQVLQT-REKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTV 440
+ H+++LQ + + +F+ ++G +ITL + W SF+NPW++++ +I+ + V
Sbjct 373 RPLMLAIHKKILQAGGQPFDYSPIRFRTRNGEYITLDTSWSSFINPWSRKISFIIGRHKV 432
>sp|Q17062|PER_ANTPE Period circadian protein OS=Antheraea pernyi
OX=7119 GN=per PE=2 SV=1
Length=849
Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/291 (21%), Positives = 128/291 (44%), Gaps = 38/291 (13%)
Query 152 LRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSS 211
L +GF V+ G +L+ + S+ L + ++ +G+S D++HP+D Q+++
Sbjct 162 LSNCNGFSCVISMHDGVVLYATASLTSTLGFPKDMWVGRSFIDFVHPRDRNTFASQITNE 221
Query 212 DTAPRERLIDAKTGLPVKTDITPGPSRLCSGAR-RSFFCRMKCNRPSVKVEDKDFPSTCS 270
P+ + +T +T PG + +C R R C SVK
Sbjct 222 LAIPKIVSLTEETD---QTMENPGSTMVCRIRRYRGLSCGF-----SVKNT--------- 264
Query 271 KKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVN 330
+T YL P + N +++G + ++ S +
Sbjct 265 -------------TTAYL----PFLLKFKFKNVNEDKGNVIYLVIQAVPFFSAF---KTS 304
Query 331 GEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHR 390
E+ K++ +V RH+ DG ++D + L YLPQ++ +H D+G+L E +
Sbjct 305 NEVLAKTVSFVIRHSADGNLEYIDAESVPYLGYLPQDITNRDALLLYHPGDLGYLQEIYG 364
Query 391 QVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 441
+++ + Y+ ++G ++ + + W +F+NPW+K++E++ + ++
Sbjct 365 SLVKEGNVTRSKTYRMMTQNGHYMKVETEWSAFINPWSKKLEFVTGKHYII 415
>sp|Q8K3T2|PER2_SPAJD Period circadian protein homolog 2 OS=Spalax
judaei OX=134510 GN=PER2 PE=2 SV=1
Length=1248
Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 102/457 (22%), Positives = 178/457 (39%), Gaps = 82/457 (18%)
Query 22 DLLSSSLGTSGVDCNRKRKGSSTD---YQESMDTDKDDPHG-----RLEYTEHQGRIKNA 73
D+ S S G R +GS D + M + D H RL TE Q +
Sbjct 30 DMSSGSSGHENCSMGRDSQGSDCDDNGKELRMLVEPSDTHSSPDAFRLMMTEPQHNPSTS 89
Query 74 REAHSQIEKRRRDK-MNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
+ Q K K + + EL +P K L +L+ A++ +K ++ Y
Sbjct 90 GCSSEQSAKANAHKELIRTLRELKVHLPADKKAKGKASTLAILKYALRSVKQVKANEEYY 149
Query 133 T---EANYKPTFLS---------DDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
+ +P + + I++ AD F V GKIL++S V I
Sbjct 150 QLLMSSESQPCSMDVPSYTVEQVEGITSEYIVKNADMFAVAVSLVSGKILYISNQVASIF 209
Query 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
+ ++ ++L P D++ + S T P + LP P +C
Sbjct 210 HCKKDAFSDAKFVEFLAPHDVS-----VFHSYTTPYK--------LP--------PWSMC 248
Query 241 SGA---------RRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSW 291
G +SFFCR+ + K + T YL
Sbjct 249 CGVDSFTQECMEEKSFFCRV----------------SVGKHHESEIRYQPFRMTPYL--- 289
Query 292 PPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFV 351
+ + E +++ C CL+ R+HS + E R+ + + H + F
Sbjct 290 ----VKVQEQQGAESQLC---CLLLAERIHSGYEAPRIPPEKRI----FTTTHIPNCLFQ 338
Query 352 FVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQT-REKITTNCYKFKIKD 410
VD+RA +L YLPQ+L+ T H D + H+++LQ + + +F+ ++
Sbjct 339 DVDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQAGGQPFDYSPIRFRARN 398
Query 411 GSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLE 447
G +ITL + W SF+NPW++++ +I+ + V + + E
Sbjct 399 GEYITLDTSWSSFINPWSRKISFIIGRHKVRVGPLNE 435
>sp|Q8CJE2|PER3_RAT Period circadian protein homolog 3 OS=Rattus
norvegicus OX=10116 GN=Per3 PE=2 SV=1
Length=1119
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 159/378 (42%), Gaps = 57/378 (15%)
Query 76 AHSQIEKRRR--DKMNSFIDELASLVPT-CNAMSRKLDKLT-VLRM--AVQHMKTLRGAT 129
+HS+ E R R +++ + E+ P + LD L LR +VQ +
Sbjct 40 SHSEHEDRNRMSEELIMVVQEMKKYFPAERHTKPSTLDALNYALRCVHSVQANSEFFQSL 99
Query 130 NPYTEANYKPTFLSDDELKHL----ILRAADGFLFVVGCDRGKILFVSESVFKILNYSQN 185
+P + T + +EL L + D F+ V G+++ +SE ILN +
Sbjct 100 SPRGARQAEATVYNLEELTSLASEHTSKNTDTFVAVFSFLSGRLVHISEQAAWILNSKKG 159
Query 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
L D L P+D+ ++ + TAP T LP T S+ +
Sbjct 160 FLKSLHFVDLLAPRDV-----RVFYAHTAP--------TQLPFWNTWTQRASQYECAPVK 206
Query 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPD 305
FFCR+ C + ++ + YL + + +P+
Sbjct 207 PFFCRI-CG---------------GGDREQKRHYSPFRILPYL-------VHVHSPAQPE 243
Query 306 NEGCNLSCLVAIGRLHS-HVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYL 364
E C CL + ++HS + P+ I V + + H F+ VD+RA +L +L
Sbjct 244 PEPC---CLTLVEKIHSGYEAPR-----IPVDKRVFTTTHTPGCVFLEVDERAVPLLGFL 295
Query 365 PQELLGTSCYEYFHQDDIGHLAECHRQVLQT--REKITTNCYKFKIKDGSFITLRSRWFS 422
PQ+L+GTS Y H +D + H++VL+ + +F ++G ++ L S W S
Sbjct 296 PQDLIGTSILTYLHPEDRPLMVAVHQKVLKYVGHPPFEHSPIRFCTQNGDYVILDSSWSS 355
Query 423 FMNPWTKEVEYIVSTNTV 440
F+NPW+++V +I+ + V
Sbjct 356 FVNPWSRKVSFIIGRHKV 373
>sp|O15055|PER2_HUMAN Period circadian protein homolog 2 OS=Homo
sapiens OX=9606 GN=PER2 PE=1 SV=2
Length=1255
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 133/302 (44%), Gaps = 65/302 (22%)
Query 151 ILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSS 210
I++ AD F V GKIL++S+ V I + ++ ++L P D+ +
Sbjct 186 IVKNADMFAVAVSLVSGKILYISDQVASIFHCKRDAFSDAKFVEFLAPHDVG-----VFH 240
Query 211 SDTAPRERLIDAKTGLPVKTDITPGPSRLCSGA---------RRSFFCRMKCNRPSVKVE 261
S T+P + LP+ + +CSGA +SFFCR+ SV+
Sbjct 241 SFTSPYK--------LPLWS--------MCSGADSFTQECMEEKSFFCRV-----SVR-- 277
Query 262 DKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGC--NLSCLVAIGR 319
K + + T YL K+ D +G L CL+ R
Sbjct 278 ---------KSHENEIRYHPFRMTPYL-----VKVR-------DQQGAESQLCCLLLAER 316
Query 320 LHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQ 379
+HS + E R+ + + H + F VD+RA +L YLPQ+L+ T H
Sbjct 317 VHSGYEAPRIPPEKRI----FTTTHTPNCLFQDVDERAVPLLGYLPQDLIETPVLVQLHP 372
Query 380 DDIGHLAECHRQVLQTR-EKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTN 438
D + H+++LQ+ + + +F+ ++G +ITL + W SF+NPW++++ +I+ +
Sbjct 373 SDRPLMLAIHKKILQSGGQPFDYSPIRFRARNGEYITLDTSWSSFINPWSRKISFIIGRH 432
Query 439 TV 440
V
Sbjct 433 KV 434
>sp|Q24119|TRH_DROME Protein trachealess OS=Drosophila melanogaster
OX=7227 GN=trh PE=1 SV=4
Length=1022
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 129/542 (24%), Positives = 216/542 (40%), Gaps = 75/542 (14%)
Query 68 GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
G ++ +E + RR K N ELA ++P A++ +LDK +++R+ + ++K LR
Sbjct 82 GILELRKEKSRDAARSRRGKENYEFYELAKMLPLPAAITSQLDKASIIRLTISYLK-LRD 140
Query 128 ATN----PYTEANYKPTFLSDDELKH-------------LILRAADGFLFVVGCDRGKIL 170
+ P+T + L ++ IL++ DGF V D G+ L
Sbjct 141 FSGHGDPPWTREASSSSKLKSAAIRRSPAVDLFEQHQGTHILQSLDGFALAVAAD-GRFL 199
Query 171 FVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKT 230
++SE+V L SQ ++ G S+FDY+H D +++ +QL S T+ + +
Sbjct 200 YISETVSIYLGLSQVEMTGSSIFDYIHQADHSEIADQLGLSLTSGGGGGGGSSSSGGGGG 259
Query 231 DITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADR-----------KSF 279
G + SGA N P V ST K DR K
Sbjct 260 GAGGGMASPTSGASDDGSGTHGTNNPDVAASMTQA-STSGYKGYDRSFCVRMKSTLTKRG 318
Query 280 CTIHSTGYLKS-----WPPTKMGLDEDNEPDNEGCNLSCLVAIGRLH-----SH------ 323
C S+GY S + N G N S ++ + +L SH
Sbjct 319 CHFKSSGYRASDATSNCNNGNNASNNAKNVKNPGSNYSVVLLLCKLRPQYTFSHSRKSQP 378
Query 324 ----------VVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSC 373
+P P EIR++ +V+R D + + R + +L Y P++L+ S
Sbjct 379 PLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPEDLVNKSL 438
Query 374 YEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEY 433
Y H +D L + H +++ + ++ T Y+ K G + L++ + + +
Sbjct 439 YSLCHAEDANRLRKSHSDLIE-KGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKNADEQN 497
Query 434 IVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAG 493
I+ N V+ E QL SP S+ G G K + G PGG +G G
Sbjct 498 IICVNYVISNRENENMILDCCQLEPSPDSIKHE--EGLGNDKSS-----GSPGGDASGEG 550
Query 494 ---------KIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGG 544
K+ + HR RG S ++ S +N + T D+ +P G +I +G
Sbjct 551 NSHLSAGDMKLNSPKTDSEGHSHRGRGRSAAASHGSSMN-SLTMIKDSPTPLGVEIDSGV 609
Query 545 TP 546
P
Sbjct 610 LP 611
>sp|Q4PJW2|NCOA1_PIG Nuclear receptor coactivator 1 OS=Sus scrofa
OX=9823 GN=NCOA1 PE=2 SV=1
Length=1440
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 155/363 (43%), Gaps = 69/363 (19%)
Query 78 SQIEKRRRDKMNSFIDELASLVPT--------------CNAMSRKLDKLTVLRMAVQHMK 123
S EKRRR++ N +++ELA L+ C + + +D++ +++ Q
Sbjct 29 SSTEKRRREQENKYLEELAELLSANISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKS 88
Query 124 TLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYS 183
T ++ + + L L+L A DGF FVV C+ G+I+FVSE+V L Y+
Sbjct 89 TTDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCE-GRIVFVSENVTSYLGYN 147
Query 184 QNDLIGQSLFDYLHPKDIAK-VKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSG 242
Q +L+ S++ LH D A+ VK L S L++ P P
Sbjct 148 QEELMNTSVYSILHVGDHAEFVKNLLPKS-------LVNG----------VPWPQEATRR 190
Query 243 ARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDN 302
+F CRM + P D P T +++ R + KS + ED
Sbjct 191 NSHTFNCRMLIHPP-------DEPGTENQEACQRYEVMQCFTVSQPKS-------IQEDG 236
Query 303 EPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQ---RATA 359
E D + SCL+ I R +P+P + V+S ++++ GK + +D RA
Sbjct 237 E-DFQ----SCLICIARR----LPRPP-AIMGVES--FMTKQDTTGKIISIDTSSLRAAG 284
Query 360 ILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQ---TREKITTNCYKFKIKDGSFITL 416
+ +E + Y +F G RQ+ Q TR ++ Y+F + DG+ ++
Sbjct 285 RTGW--EEFMRKCIYAFFQPQ--GREPSYARQLFQEVMTRGTASSPSYRFILNDGTMLSA 340
Query 417 RSR 419
++
Sbjct 341 HTK 343
>sp|Q15788|NCOA1_HUMAN Nuclear receptor coactivator 1 OS=Homo
sapiens OX=9606 GN=NCOA1 PE=1 SV=3
Length=1441
Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 94/362 (26%), Positives = 157/362 (43%), Gaps = 67/362 (19%)
Query 78 SQIEKRRRDKMNSFIDELASL----VPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
S EKRRR++ N +++ELA L + +++S K DK +L+ V ++ ++ +
Sbjct 29 SSTEKRRREQENKYLEELAELLSANISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKS 88
Query 134 E----------ANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYS 183
++ + + L L+L A DGF FVV C+ G+I+FVSE+V L Y+
Sbjct 89 TTDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCE-GRIVFVSENVTSYLGYN 147
Query 184 QNDLIGQSLFDYLHPKDIAK-VKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSG 242
Q +L+ S++ LH D A+ VK L S L++ P P
Sbjct 148 QEELMNTSVYSILHVGDHAEFVKNLLPKS-------LVNG----------VPWPQEATRR 190
Query 243 ARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDN 302
+F CRM + P D P T +++ R + KS + ED
Sbjct 191 NSHTFNCRMLIHPP-------DEPGTENQEACQRYEVMQCFTVSQPKS-------IQEDG 236
Query 303 EPDNEGCNLSCLVAIGRLHSHVVPQP--VNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
E D + SCL+ I R +P+P + G V+S ++++ GK + +D +
Sbjct 237 E-DFQ----SCLICIARR----LPRPPAITG---VES--FMTKQDTTGKIISIDTSSLRA 282
Query 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQ---TREKITTNCYKFKIKDGSFITLR 417
E L C F Q G RQ+ Q TR ++ Y+F + DG+ ++
Sbjct 283 AGRTGWEDLVRKCIYAFFQPQ-GREPSYARQLFQEVMTRGTASSPSYRFILNDGTMLSAH 341
Query 418 SR 419
++
Sbjct 342 TK 343
>sp|Q9Z301|PER2_RAT Period circadian protein homolog 2 OS=Rattus
norvegicus OX=10116 GN=Per2 PE=1 SV=1
Length=1257
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 123/298 (41%), Gaps = 43/298 (14%)
Query 151 ILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSS 210
I++ +D F V GKIL++S V I + ++ ++L P D++ +
Sbjct 184 IVKNSDMFAVAVSLVSGKILYISNQVAPIFHCKKDAFSDAKFVEFLAPHDVSVFHSYTTP 243
Query 211 SDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCS 270
P +GL T + C +SFFCR+ +
Sbjct 244 YKLPP----WSVSSGLDSFT-------QECM-EEKSFFCRV----------------SVG 275
Query 271 KKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVN 330
K + + T YL + E L CL+ R+HS +
Sbjct 276 KHHENEIRYQPFRMTPYLV----------KVQEQKGAASQLCCLLLAERVHSGYEAPRIP 325
Query 331 GEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHR 390
E R+ + + H + F VD+RA +L YLPQ+L+ T H D + H+
Sbjct 326 PEKRI----FTTTHTPNCLFQDVDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHK 381
Query 391 QVLQTR-EKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLE 447
++LQ + + +F+ ++G +ITL + W SF+NPW++++ +I+ + V + + E
Sbjct 382 KILQASGQPFDYSPIRFRTRNGEYITLDTSWSSFINPWSRKISFIIGRHKVRVGPLNE 439
>sp|B5DE09|NCOA2_XENTR Nuclear receptor coactivator 2 OS=Xenopus
tropicalis OX=8364 GN=ncoa2 PE=2 SV=1
Length=1440
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/380 (24%), Positives = 160/380 (42%), Gaps = 68/380 (18%)
Query 81 EKRRRDKMNSFIDELASLV----PTCNAMSRKLDKLTVLRMAV-------QHMKTLRGAT 129
EKR R++ N +I+ELA L+ + ++ K DK +L+ V +H KT
Sbjct 35 EKRNREQENKYIEELAELIFANFNDIDNLNFKPDKCAILKETVKQIRQIKEHEKTAAANE 94
Query 130 NPYTEANYKPT---FLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQND 186
+ +A+ T + D L ++L A DGF FVV + G ++FVSE+V + L Y+Q +
Sbjct 95 DEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVNRE-GNVVFVSENVTQYLRYNQEE 153
Query 187 LIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRS 246
L+ S++ LH D ++ + L LP K+ + GP R +
Sbjct 154 LMNTSVYSILHVGDHSEFIKNL-----------------LP-KSIVNGGPRR----NSHT 191
Query 247 FFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDN 306
F CRM +P ++ E++ + +K + + +K
Sbjct 192 FNCRMLV-KPMMECEEEGHDGQETHQKYETMQCFAVSQPKSIKE---------------- 234
Query 307 EGCNL-SCLVAIGR---LHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILA 362
EG + SCL+ + R + VP P S + +R + GK +D L
Sbjct 235 EGEDFQSCLICVARRVPMKERPVPPP--------SESFTTRQDLQGKITSLDTTNMRALM 286
Query 363 YLPQELLGTSCYEYFHQDDIGHL--AECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
E L C + FH G + ++ H Q + + T+ Y+F + DG+ + ++
Sbjct 287 RPGWEDLVRRCIQRFHSQHDGEISYSKRHHQEVLRQGHATSPFYRFALSDGTTVLAHTKS 346
Query 421 FSFMNPWTKEVEYIVSTNTV 440
+ T E + ++S + +
Sbjct 347 KLMRSQTTNEPQLVLSLHVL 366
>sp|P70365|NCOA1_MOUSE Nuclear receptor coactivator 1 OS=Mus musculus
OX=10090 GN=Ncoa1 PE=1 SV=2
Length=1447
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 158/362 (44%), Gaps = 67/362 (19%)
Query 78 SQIEKRRRDKMNSFIDELASL----VPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
S EKRRR++ N +++ELA L + +++S K DK +L+ V ++ ++ +
Sbjct 29 SSTEKRRREQENKYLEELAELLSANISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKS 88
Query 134 E----------ANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYS 183
++ + + L L+L A DGF FVV C+ G+I+FVSE+V L Y+
Sbjct 89 TTDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCE-GRIVFVSENVTSYLGYN 147
Query 184 QNDLIGQSLFDYLHPKDIAK-VKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSG 242
Q +L+ S++ LH D A+ VK L S L++ P P
Sbjct 148 QEELMNTSVYSILHVGDHAEFVKNLLPKS-------LVNG----------VPWPQEATRR 190
Query 243 ARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDN 302
+F CRM + P ED P T +++ R + KS + ED
Sbjct 191 NSHTFNCRMLIHPP----ED---PGTENQEACQRYEVMQCFTVSQPKS-------IQEDG 236
Query 303 EPDNEGCNLSCLVAIGRLHSHVVPQP--VNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
E D + SCL+ I R +P+P + G V+S ++++ GK + +D +
Sbjct 237 E-DFQ----SCLICIARR----LPRPPAITG---VES--FMTKQDTTGKIISIDTSSLRA 282
Query 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQ---TREKITTNCYKFKIKDGSFITLR 417
E L C F Q G RQ+ Q TR ++ Y+F + DG+ ++
Sbjct 283 AGRTGWEDLVRKCIYAFFQPQ-GREPSYARQLFQEVMTRGTASSPSYRFILNDGTMLSAH 341
Query 418 SR 419
++
Sbjct 342 TK 343
>sp|Q8QGQ8|PER2_CHICK Period circadian protein homolog 2 OS=Gallus
gallus OX=9031 GN=PER2 PE=2 SV=1
Length=1344
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/377 (22%), Positives = 156/377 (41%), Gaps = 85/377 (23%)
Query 92 IDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHL- 150
+ EL + +P + K LT L+ A++ +K ++ E Y+ +++ + L
Sbjct 165 LQELKAHLPAEKRIKGKSSVLTTLKYALKSIKQVKA-----NEEYYQLLMINESQPSGLN 219
Query 151 ----------------ILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFD 194
I++ AD F V GKI+++S+ IL ++ +
Sbjct 220 VSSYTVEEVETITSEYIMKNADMFAVAVSLITGKIVYISDQAAAILRCKRSYFKNAKFVE 279
Query 195 YLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPS-RLCSGAR--------- 244
L P+D++ + + T P RL PS +CS A
Sbjct 280 LLAPQDVS-----VFYTSTTPY-RL----------------PSWNICSRAESSTQDCMEE 317
Query 245 RSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEP 304
+SFFCR+ + K++ + + T YL ++ D+
Sbjct 318 KSFFCRI----------------SAGKERENEICYHPFRMTPYLIKVQDPEVAEDQ---- 357
Query 305 DNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYL 364
L C++ ++HS + + R+ + + H F VD+RA +L YL
Sbjct 358 ------LCCVLLAEKVHSGYEAPRIPPDKRI----FTTTHTPTCLFQDVDERAVPLLGYL 407
Query 365 PQELLGTSCYEYFHQDDIGHLAECHRQVLQT-REKITTNCYKFKIKDGSFITLRSRWFSF 423
PQ+L+GT + H +D + H+++LQ + + +F ++G +IT+ + W SF
Sbjct 408 PQDLIGTPVLVHLHPNDRPLMLAIHKKILQYGGQPFDYSPIRFCTRNGDYITMDTSWSSF 467
Query 424 MNPWTKEVEYIVSTNTV 440
+NPW+++V +I+ + V
Sbjct 468 INPWSRKVSFIIGRHKV 484
>sp|O57539|NCOA3_XENLA Nuclear receptor coactivator 3 OS=Xenopus
laevis OX=8355 GN=ncoa3 PE=1 SV=1
Length=1391
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/414 (25%), Positives = 175/414 (42%), Gaps = 70/414 (17%)
Query 81 EKRRRDKMNSFIDELASLVPT----CNAMSRKLDKLTVLRMAVQHMKTLR----GATNP- 131
EKRRR++ + +I+ELA L+ + + K DK +L+ V+ ++ ++ ++N
Sbjct 36 EKRRREQESKYIEELADLISANLSDIDNFNVKPDKCAILKETVRQIRQIKEQGKASSNDD 95
Query 132 -YTEANYKPT---FLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDL 187
+A+ T + D L L+L+A DGFL+VV + G I+FVSE+V + L Y Q DL
Sbjct 96 DVQKADVSSTGQGVIDKDSLGPLLLQALDGFLYVVNRE-GSIVFVSENVTQYLQYKQEDL 154
Query 188 IGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSF 247
+ S++ LH +D + L S G+P ++ TP +F
Sbjct 155 VNTSVYSILHEEDRKDFLKNLPKSTV----------NGVPWFSE-TP------RQKSHTF 197
Query 248 FCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNE 307
CRM +ED R+ + T+ + S P + ED +
Sbjct 198 NCRMLVKTSHDHLED-------GSNLDARQRYETMQC--FALSQPRAMIEEGEDLQ---- 244
Query 308 GCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
SC++ + R + +++RH + GK V +D A ++ + +
Sbjct 245 ----SCMICVARRITT-----AERAFSANPESFITRHDLTGKVVNID--ANSLRSSMRPG 293
Query 368 LLGT--SCYE--YFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSF 423
T C + FH + + H Q T Y+F + DG+ +T +++ F
Sbjct 294 FEDTIRRCIQRFLFHSEGQPWTYKRHYQEAYVHGLSETPLYRFSLADGTMVTAQTKSKLF 353
Query 424 MNPWTKEVEYIVSTNTVVLANVLEGGDPT--------FPQLTAS-PHSMDSMLP 468
NP T + VST+ L G P PQ+ + P++M+SM P
Sbjct 354 RNPVTNDPHGFVSTH--FLQREQNGYRPNPNPMAQGIRPQMNPNLPNTMNSMPP 405
>sp|Q25478|PER_MANSE Period circadian protein (Fragment) OS=Manduca
sexta OX=7130 GN=per PE=2 SV=1
Length=354
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/295 (21%), Positives = 132/295 (45%), Gaps = 50/295 (17%)
Query 167 GKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-G 225
G +++ + S+ L + ++ IG+S D++HP+D Q++S P+ +++ ++ G
Sbjct 1 GIVMYTTSSLTTTLGFPKDMWIGRSFIDFVHPRDRNTFASQITSGLAVPK--IVNGQSPG 58
Query 226 LPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHST 285
P T + CR++ R T DR
Sbjct 59 NPASTMV----------------CRIRRYRGL----------TTGFGVKDR--------- 83
Query 286 GYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHA 345
+ ++ P + N D EG + ++ + S + E+ K++ +V RHA
Sbjct 84 --VVTFMPFLLKFTFKNVSDEEGKVIYLVIQATQFFSAF---RIPSEVVSKAVPFVMRHA 138
Query 346 IDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYK 405
+G ++D + L YLPQ++ + +H +D+ +L + + +++ T Y+
Sbjct 139 ANGNLEYIDPESVPYLGYLPQDVTDKDALQLYHPEDLDYLQQVYETIVKEGGVPRTKAYR 198
Query 406 FKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASP 460
++G ++ L + W SF+NPW+K +++++ + +++EG P+ P + SP
Sbjct 199 MMAQNGDYLKLETEWSSFINPWSKRLDFVIGKH-----HIIEG--PSNPDVFQSP 246
>sp|Q8CHI5|PER1_RAT Period circadian protein homolog 1 OS=Rattus
norvegicus OX=10116 GN=Per1 PE=1 SV=2
Length=1293
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 129/308 (42%), Gaps = 47/308 (15%)
Query 145 DELKHLI----LRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKD 200
+EL+H+ LR D F V G+I+++SE +L ++ G + L P+D
Sbjct 203 EELEHITSEYTLRNQDTFSVAVSFLTGRIVYISEQAGVLLRCKRDVFRGARFSELLAPQD 262
Query 201 IAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKV 260
+ + S A +GL D T +S FCR++
Sbjct 263 VGVFYGSTTPSRLPTWGTGTSAGSGL---KDFT---------QEKSVFCRIRGG------ 304
Query 261 EDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRL 320
D+D + T Y+ TK+ + D CL+ R+
Sbjct 305 PDRD----------PGPRYQPFRLTPYV-----TKIRVS-----DGAPAQPCCLLIAERI 344
Query 321 HSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQD 380
HS + + R+ + +RH F VD+RA +L YLPQ+LLG + H +
Sbjct 345 HSGYEAPRIPPDKRI----FTTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPE 400
Query 381 DIGHLAECHRQVLQ-TREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNT 439
D + H+++LQ + + +F ++G ++T+ + W F++PW+++V +++ +
Sbjct 401 DRPLMLAIHKKILQLAGQPFDHSPIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHK 460
Query 440 VVLANVLE 447
V A + E
Sbjct 461 VRTAPLNE 468
>sp|O35973|PER1_MOUSE Period circadian protein homolog 1 OS=Mus
musculus OX=10090 GN=Per1 PE=1 SV=2
Length=1291
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 129/308 (42%), Gaps = 47/308 (15%)
Query 145 DELKHLI----LRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKD 200
+EL+H+ LR D F V G+I+++SE +L ++ G + L P+D
Sbjct 203 EELEHITSEYTLRNQDTFSVAVSFLTGRIVYISEQAGVLLRCKRDVFRGARFSELLAPQD 262
Query 201 IAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKV 260
+ + S A +GL D T +S FCR++
Sbjct 263 VGVFYGSTTPSRLPTWGTGTSAGSGL---KDFT---------QEKSVFCRIRGG------ 304
Query 261 EDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRL 320
D+D + T Y+ TK+ + D CL+ R+
Sbjct 305 PDRD----------PGPRYQPFRLTPYV-----TKIRVS-----DGAPAQPCCLLIAERI 344
Query 321 HSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQD 380
HS + + R+ + +RH F VD+RA +L YLPQ+LLG + H +
Sbjct 345 HSGYEAPRIPPDKRI----FTTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPE 400
Query 381 DIGHLAECHRQVLQ-TREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNT 439
D + H+++LQ + + +F ++G ++T+ + W F++PW+++V +++ +
Sbjct 401 DRPLMLAIHKKILQLAGQPFDHSPIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHK 460
Query 440 VVLANVLE 447
V A + E
Sbjct 461 VRTAPLNE 468
>sp|Q9W705|NCOA2_XENLA Nuclear receptor coactivator 2 OS=Xenopus
laevis OX=8355 GN=ncoa2 PE=2 SV=1
Length=1516
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/360 (24%), Positives = 152/360 (42%), Gaps = 70/360 (19%)
Query 81 EKRRRDKMNSFIDELASLV----PTCNAMSRKLDKLTVLRMAV-------QHMKTLRGAT 129
EKR R++ N +I+ELA L+ + ++ K DK +L+ V +H KT
Sbjct 32 EKRNREQENKYIEELAELIFANFNDIDNLNFKPDKCAILKETVKQIRQIKEHEKTAAANE 91
Query 130 NPYTEANYKPT---FLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQND 186
+ +A+ T + D L ++L A DGF FVV + G ++FVSE+V + L Y+Q +
Sbjct 92 DEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVNRE-GNVVFVSENVTQYLRYNQEE 150
Query 187 LIGQSLFDYLHPKDIAK-VKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
L+ S++ LH D ++ +K L S L++ G+P + T
Sbjct 151 LMNTSVYSILHVGDHSEFIKNLLPKS-------LVN---GVPRRNSHT------------ 188
Query 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPD 305
F CRM +P ++ E++ + +K + + +K
Sbjct 189 -FNCRMLV-KPMMECEEERHDGQETHQKYESMQCFAVSQPKSIKE--------------- 231
Query 306 NEGCNL-SCLVAIGR---LHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAIL 361
EG + SCL+ + R + VP P S + +R GK +D + L
Sbjct 232 -EGEDFQSCLICVARRVPVKERPVPPP--------SESFTTRQDFQGKITSLDTTSMRAL 282
Query 362 AYLPQELLGTSCYEYFHQDDIGHLAEC--HRQVLQTREKITTNCYKFKIKDGSFITLRSR 419
E + C + FH G ++ H Q + + T+ Y+F + DG+ + +++
Sbjct 283 MRPGWEDMVRRCIQRFHSQHDGEISYSRRHHQEVLRQGHATSPFYRFSLSDGTTVVAQTK 342
>sp|O15534|PER1_HUMAN Period circadian protein homolog 1 OS=Homo
sapiens OX=9606 GN=PER1 PE=1 SV=2
Length=1290
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 132/311 (42%), Gaps = 53/311 (17%)
Query 145 DELKHLI----LRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKD 200
+EL+H+ L+ D F V G+I+++SE +L ++ G + L P+D
Sbjct 203 EELEHITSEYTLQNQDTFSVAVSFLTGRIVYISEQAAVLLRCKRDVFRGTRFSELLAPQD 262
Query 201 IAKVKEQLSSSDTAPRERLIDAKTGLPVKT---DITPGPSRLCSGARRSFFCRMKCNRPS 257
+ + TAP RL TG + D T +S FCR++
Sbjct 263 VG-----VFYGSTAP-SRLPTWGTGASAGSGLRDFT---------QEKSVFCRIRGG--- 304
Query 258 VKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAI 317
D+D + T Y+ TK+ + D CL+
Sbjct 305 ---PDRD----------PGPRYQPFRLTPYV-----TKIRVS-----DGAPAQPCCLLIA 341
Query 318 GRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYF 377
R+HS + + R+ + +RH F VD+RA +L YLPQ+LLG +
Sbjct 342 ERIHSGYEAPRIPPDKRI----FTTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFL 397
Query 378 HQDDIGHLAECHRQVLQ-TREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVS 436
H +D + H+++LQ + + +F ++G ++T+ + W F++PW+++V +++
Sbjct 398 HPEDRPLMLAIHKKILQLAGQPFDHSPIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLG 457
Query 437 TNTVVLANVLE 447
+ V A + E
Sbjct 458 RHKVRTAPLNE 468
>sp|Q8K3T3|PER1_SPAJD Period circadian protein homolog 1 OS=Spalax
judaei OX=134510 GN=PER1 PE=2 SV=1
Length=1285
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/381 (22%), Positives = 159/381 (42%), Gaps = 61/381 (16%)
Query 83 RRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKP--- 139
R + ++ + + EL +P + + L L+ A+ +K ++ Y + + +
Sbjct 133 RTQKELMTALRELKLRLPPGHRGKGRSGTLATLQYALACVKQVQANQEYYQQWSLEEGEP 192
Query 140 -----TFLSDDELKHLI----LRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQ 190
+ + +EL+H+ LR D F V G+I+++SE +L ++ G
Sbjct 193 CAMDMSTYTLEELEHITSEYTLRNQDTFSVAVSFLTGRIVYISEQAGVLLRCKRDVFRGA 252
Query 191 SLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKT---DITPGPSRLCSGARRSF 247
+ L P+D+ + TAP RL TG + D T +S
Sbjct 253 RFSELLAPQDVG-----VFYGSTAPF-RLPTWGTGTSAGSGLKDFT---------QEKSV 297
Query 248 FCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNE 307
FCR++ D+D + T Y+ TK+ + D
Sbjct 298 FCRIRGG------PDRD----------PGPRYHPFRLTPYV-----TKIRVS-----DGA 331
Query 308 GCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
CL+ R+HS + + R+ + +RH F VD+RA +L YLPQ+
Sbjct 332 PAQPCCLLIAERIHSGYEAPRIPPDKRI----FTTRHTPSCLFQDVDERAAPLLGYLPQD 387
Query 368 LLGTSCYEYFHQDDIGHLAECHRQVLQ-TREKITTNCYKFKIKDGSFITLRSRWFSFMNP 426
LLG + H +D + H+++LQ + + +F ++G ++T+ + W F++P
Sbjct 388 LLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPFDHSPIRFCARNGEYVTMDTSWAGFVHP 447
Query 427 WTKEVEYIVSTNTVVLANVLE 447
W+++V +++ + V A + E
Sbjct 448 WSRKVAFVLGRHKVRTAPLNE 468
>sp|Q9WUI9|NCOA2_RAT Nuclear receptor coactivator 2 OS=Rattus
norvegicus OX=10116 GN=Ncoa2 PE=1 SV=1
Length=1465
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/378 (23%), Positives = 157/378 (42%), Gaps = 65/378 (17%)
Query 81 EKRRRDKMNSFIDELASLV----PTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEAN 136
EKR R++ N +I+ELA L+ + + K DK +L+ V+ ++ ++ AN
Sbjct 35 EKRNREQENKYIEELAELIFANFNDIDNFNFKPDKCAILKETVKQIRQIKEQEK-AAAAN 93
Query 137 YKPTFLSD-----------DELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQN 185
SD D L ++L A DGF FVV + G ++FVSE+V + L Y+Q
Sbjct 94 IDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLE-GNVVFVSENVTQYLRYNQE 152
Query 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAK-TGLPVKTDITPGPSRLCSGAR 244
+L+ +S++ LH D + + L P+ + TG P + +
Sbjct 153 ELMNKSVYSILHVGDHTEFVKNL-----LPKSMVNGGSWTGEPPRRN------------S 195
Query 245 RSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEP 304
+F CRM +P E++ + + +K + + +K ED +
Sbjct 196 HTFNCRMLV-KPLPDSEEEGHDNQEAHQKYETMQCFAVSQPKSIKEE-------GEDKQ- 246
Query 305 DNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSME-YVSRHAIDGKFVFVDQRATAILAY 363
SCL+ + R P+ + S E + +R + GK F+D
Sbjct 247 -------SCLICVARRV------PMKERPALPSSESFTTRQDLQGKITFLDTSTMRDAMK 293
Query 364 LPQELLGTSCYEYFHQ----DDIGHLAECHRQVLQTREKIT-TNCYKFKIKDGSFITLRS 418
E L C + FH + + + H +VL R+ + + Y+F + DG+ + ++
Sbjct 294 PGWEDLVRRCIQKFHTQHEGESLSYAKRHHHEVL--RQGLAFSQIYRFSLSDGTLVAAQT 351
Query 419 RWFSFMNPWTKEVEYIVS 436
+ + T E + ++S
Sbjct 352 KSKLIRSQTTNEPQLVIS 369
>sp|Q25020|PER_HYACE Period circadian protein (Fragment) OS=Hyalophora
cecropia OX=7123 GN=per PE=2 SV=1
Length=358
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/300 (19%), Positives = 126/300 (42%), Gaps = 49/300 (16%)
Query 167 GKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGL 226
G +++ + S+ L + ++ IG+S D+LHPKD Q+++ +
Sbjct 1 GVVMYTTSSITATLGFPKDMWIGRSFIDFLHPKDANTFASQITNG------------LAI 48
Query 227 PVKTDITPGPSRLCSGARRSFFCRMKCNR---PSVKVEDKDFPSTCSKKKADRKSFCTIH 283
P + T +++ + CR++ R V+D
Sbjct 49 PKIVNDTQEKAQIFGTQGSTMVCRIRRYRGLSSGFGVKDTSV------------------ 90
Query 284 STGYLKSWPPTKMGLDEDNEPDNEGCNLSCLV-AIGRLHSHVVPQPVNGEIRVKSMEYVS 342
S+ P + N D++G + ++ + ++ P EI + + ++
Sbjct 91 ------SYMPFLLKFRFRNISDDKGLVVYLVIQTVPFFSAYKTP----NEILTQEVSFIM 140
Query 343 RHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTN 402
RH+ +G ++D L Y+PQ++ + +H D+ L E ++ +++ +
Sbjct 141 RHSANGNLEYIDPDCVPYLGYIPQDITNRNALVLYHPGDLPFLQEVYQAIVKEGSVTRSK 200
Query 403 CYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLA----NVLEGGDP-TFPQLT 457
Y+ ++G FI + + W +F+NPW++++E++ ++ +V E DP P+LT
Sbjct 201 SYRMVTQNGHFIKVETEWSAFINPWSRKLEFVNGKYYIIEGPANPDVFESPDPEKTPKLT 260
>sp|Q98TW1|NCOA2_DANRE Nuclear receptor coactivator 2 OS=Danio
rerio OX=7955 GN=ncoa2 PE=1 SV=1
Length=1505
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 162/376 (43%), Gaps = 64/376 (17%)
Query 81 EKRRRDKMNSFIDELASLV----PTCNAMSRKLDKLTVLRMAVQHMKTLR-----GATNP 131
EKR R+ + +I+ELA L+ + + K DK +L+ V+ ++ ++ A N
Sbjct 36 EKRNREHESKYIEELAELIFANFNDIDNFNVKPDKCAILKETVKQIRQIKEQEKAAAANE 95
Query 132 --YTEANYKPT---FLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQND 186
+A+ T + D L ++L A DGF FVV + G I+FVSE+V + L Y+Q +
Sbjct 96 DEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVNME-GNIVFVSENVTQYLRYNQEE 154
Query 187 LIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRS 246
L+ S++ LH D A+ + L P+ + G+P ++ P R +
Sbjct 155 LMNTSVYSILHVGDHAEFIKNL-----LPKSHV----NGVPWSSE---NPRR----NSHT 198
Query 247 FFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDN 306
F CRM N S E +D +K + F S P + ED +
Sbjct 199 FNCRMLVNPHSEAEETQDH--EAQQKYETMQCFAV--------SEPKSIKEEGEDFQ--- 245
Query 307 EGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSME-YVSRHAIDGKFVFVDQ---RATAILA 362
SCL+ + R P+ + + E + +R + GK +D RA+
Sbjct 246 -----SCLICVARR------VPMKERPMLPTQESFTTRQDLQGKITSLDTSLLRASMKPG 294
Query 363 YLPQELLGTSCYEYFHQDDIGHL--AECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
+ E L C + FH + G + A+ H+Q + + + Y+F + DG+ ++ ++
Sbjct 295 W---EDLVRRCIQRFHLQNDGDISFAKRHQQEVIRHGQAFSPIYRFSLSDGTIVSAHTKS 351
Query 421 FSFMNPWTKEVEYIVS 436
+ T E + +S
Sbjct 352 KLVRSSSTNEPQLYMS 367
>sp|Q61026|NCOA2_MOUSE Nuclear receptor coactivator 2 OS=Mus musculus
OX=10090 GN=Ncoa2 PE=1 SV=3
Length=1462
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 167/415 (40%), Gaps = 81/415 (20%)
Query 81 EKRRRDKMNSFIDELASLV----PTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEAN 136
EKR R++ N +I+ELA L+ + + K DK +L+ V+ ++ ++ AN
Sbjct 35 EKRNREQENKYIEELAELIFANFNDIDNFNFKPDKCAILKETVKQIRQIKEQEK-AAAAN 93
Query 137 YKPTFLSD-----------DELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQN 185
SD D L ++L A DGF FVV + G ++FVSE+V + L Y+Q
Sbjct 94 IDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLE-GSVVFVSENVTQYLRYNQE 152
Query 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
+L+ +S++ LH D + + L + + G S RR
Sbjct 153 ELMNKSVYSILHVGDHTEFVKNL-------------------LPKSMVNGGSWSGEPPRR 193
Query 246 S---FFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDN 302
S F CRM +P E++ S + +K + + +K
Sbjct 194 SSHTFNCRMLV-KPLPDSEEEGHDSQEAHQKYEAMQCFAVSQPKSIKE------------ 240
Query 303 EPDNEGCNL-SCLVAIGRLHSHVVPQPVNGEIRVKSME-YVSRHAIDGKFVFVDQRATAI 360
EG +L SCL+ + R P+ + S E + +R + GK +D
Sbjct 241 ----EGEDLQSCLICVARRV------PMKERPTLPSSESFTTRQDLQGKITSLDTSTMRA 290
Query 361 LAYLPQELLGTSCYEYFHQ----DDIGHLAECHRQVLQTREKIT-TNCYKFKIKDGSFIT 415
E L C + FH + + + H +VL R+ + + Y+F + DG+ +
Sbjct 291 AMKPGWEDLVRRCIQKFHTQHEGESLSYAKRHHHEVL--RQGLAFSQIYRFSLSDGTLVA 348
Query 416 LRSRWFSFMNPWTKEVEYIVS-------TNTVVLANVLEG---GDPTFPQLTASP 460
+++ + T E + ++S N V+ L G G P P ++SP
Sbjct 349 AQTKSKLIRSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQAMGKPLNPISSSSP 403
>sp|Q15596|NCOA2_HUMAN Nuclear receptor coactivator 2 OS=Homo
sapiens OX=9606 GN=NCOA2 PE=1 SV=2
Length=1464
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/380 (23%), Positives = 154/380 (41%), Gaps = 69/380 (18%)
Query 81 EKRRRDKMNSFIDELASLV----PTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEAN 136
EKR R++ N +I+ELA L+ + + K DK +L+ V+ ++ ++ AN
Sbjct 35 EKRNREQENKYIEELAELIFANFNDIDNFNFKPDKCAILKETVKQIRQIKEQEK-AAAAN 93
Query 137 YKPTFLSD-----------DELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQN 185
SD D L ++L A DGF FVV + G ++FVSE+V + L Y+Q
Sbjct 94 IDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLE-GNVVFVSENVTQYLRYNQE 152
Query 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
+L+ +S++ LH D + + L + I G S RR
Sbjct 153 ELMNKSVYSILHVGDHTEFVKNL-------------------LPKSIVNGGSWSGEPPRR 193
Query 246 ---SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDN 302
+F CRM +P E++ + + +K + + +K
Sbjct 194 NSHTFNCRMLV-KPLPDSEEEGHDNQEAHQKYETMQCFAVSQPKSIKE------------ 240
Query 303 EPDNEGCNL-SCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAIL 361
EG +L SCL+ + R VP + S + +R + GK +D
Sbjct 241 ----EGEDLQSCLICVARR----VPM-KERPVLPSSESFTTRQDLQGKITSLDTSTMRAA 291
Query 362 AYLPQELLGTSCYEYFHQ----DDIGHLAECHRQVLQTREKIT-TNCYKFKIKDGSFITL 416
E L C + FH + + + H +VL R+ + + Y+F + DG+ +
Sbjct 292 MKPGWEDLVRRCIQKFHAQHEGESVSYAKRHHHEVL--RQGLAFSQIYRFSLSDGTLVAA 349
Query 417 RSRWFSFMNPWTKEVEYIVS 436
+++ + T E + ++S
Sbjct 350 QTKSKLIRSQTTNEPQLVIS 369
>sp|Q3U1U7|AHRR_MOUSE Aryl hydrocarbon receptor repressor OS=Mus
musculus OX=10090 GN=Ahrr PE=1 SV=1
Length=701
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/197 (27%), Positives = 90/197 (46%), Gaps = 32/197 (16%)
Query 82 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTF 141
KR RD++N+ +D LASL+P + KLDKL+VLR++V +++ +
Sbjct 35 KRHRDRLNTELDHLASLLPFSPDIISKLDKLSVLRLSVSYLRVKSFFQALQETCVWSAPA 94
Query 142 LSDDELKH---------LILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSL 192
LS +E + L+L + +GF VV + G I + S ++ L + Q D++ Q++
Sbjct 95 LSPEEHSYRGFPVQEGRLLLESLNGFALVVSAE-GMIFYASATIVDYLGFHQTDVMHQNI 153
Query 193 FDYLHPKDIAKVKEQL----------------SSSDTAPRERLIDAKTGLPVKTDITPGP 236
+DY+H D QL + +D +L+ A+ G P
Sbjct 154 YDYIHVDDRQDFCRQLHWAMDPPQVVFGQSPHADTDNTVLGKLLRAQEG------GKGLP 207
Query 237 SRLCSGARRSFFCRMKC 253
S + R F CR++C
Sbjct 208 SEYSAFLTRCFICRVRC 224
>sp|A9YTQ3|AHRR_HUMAN Aryl hydrocarbon receptor repressor OS=Homo
sapiens OX=9606 GN=AHRR PE=1 SV=3
Length=701
Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 24/199 (12%)
Query 78 SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMK------------TL 125
S KR RD++N+ +D LASL+P + KLDKL+VLR++V +++ +
Sbjct 34 SNPSKRHRDRLNAELDHLASLLPFPPDIISKLDKLSVLRLSVSYLRVKSFFQVVQEQSSR 93
Query 126 RGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQN 185
+ A + + P S L+L + +GF VV + G I + S ++ L + Q
Sbjct 94 QPAAGAPSPGDSCPLAGSAVLEGRLLLESLNGFALVVSAE-GTIFYASATIVDYLGFHQT 152
Query 186 DLIGQSLFDYLHPKDIAKVKEQLSSS---------DTAPRERLIDAKTG--LPVKTDITP 234
D++ Q+++DY+H D QL + P E DA G L + T
Sbjct 153 DVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVFGQPPPLETGDDAILGRLLRAQEWGTG 212
Query 235 GPSRLCSGARRSFFCRMKC 253
P+ + R F CR++C
Sbjct 213 TPTEYSAFLTRCFICRVRC 231
>sp|Q75NT5|AHRR_RAT Aryl hydrocarbon receptor repressor OS=Rattus
norvegicus OX=10116 GN=Ahrr PE=2 SV=1
Length=701
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 32/197 (16%)
Query 82 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTF 141
KR RD++N+ +D LASL+P + KLDKL+VLR++V +++ +
Sbjct 35 KRHRDRLNTELDHLASLLPFSPDIISKLDKLSVLRLSVSYLRVKSFFQALQETCVWSAPA 94
Query 142 LSDDELK---------HLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSL 192
LS ++ L+L + +GF VV + G I + S ++ L + Q D++ Q++
Sbjct 95 LSPEDHSSRGFPVQEGRLLLESLNGFALVVSAE-GMIFYASATIVDYLGFHQTDVMHQNI 153
Query 193 FDYLHPKDIAKVKEQL----------------SSSDTAPRERLIDAKTGLPVKTDITPGP 236
+DY+H D QL + +D +L+ A+ G P
Sbjct 154 YDYIHVDDRQDFCRQLHWAMDPPQVVFGQSPHADTDNTVLGKLLRAQEG------GKGLP 207
Query 237 SRLCSGARRSFFCRMKC 253
S + R F CR++C
Sbjct 208 SEYSAFLTRCFICRVRC 224
>sp|O09000|NCOA3_MOUSE Nuclear receptor coactivator 3 OS=Mus musculus
OX=10090 GN=Ncoa3 PE=1 SV=2
Length=1398
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 14/130 (11%)
Query 81 EKRRRDKMNSFIDELASLVPT----CNAMSRKLDKLTVLRMAVQHMKTLR--GAT----N 130
EK RR++ + +I+ELA L+ + + K DK +L+ V+ ++ ++ G T +
Sbjct 35 EKWRREQESKYIEELAELISANLSDIDNFNVKPDKCAILKETVRQIRQIKEQGKTISSDD 94
Query 131 PYTEANYKPT---FLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDL 187
+A+ T + D L L+L+A DGFLFVV D G I+FVSE+V + L Y Q DL
Sbjct 95 DVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRD-GNIVFVSENVTQYLQYKQEDL 153
Query 188 IGQSLFDYLH 197
+ S++ LH
Sbjct 154 VNTSVYSILH 163
>sp|O44712|AHR_CAEEL Aryl hydrocarbon receptor protein 1 OS=Caenorhabditis
elegans OX=6239 GN=ahr-1 PE=1 SV=1
Length=602
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/370 (22%), Positives = 145/370 (39%), Gaps = 79/370 (21%)
Query 67 QGRIKNAREAHSQI-----EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ- 120
Q K R+ Q+ KR R+++N ++ +A L+P ++ +LDKL+VLR+AV
Sbjct 8 QRNFKRVRDPPKQLTNTNPSKRHRERLNGELETVAMLLPYDSSTISRLDKLSVLRLAVSF 67
Query 121 -----------HMKTLRGATNPYTEANYK-------------PTFL-----------SDD 145
H A P + +Y PT +
Sbjct 68 LQCKAHFQACLHNSQFLSAGFPMSTHSYSYQPHPPIPFSNKVPTIFDLRIGTPMLDPEES 127
Query 146 ELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVK 205
+ + L++ GF+ V+ D G+I + SE+V L + Q+D++ Q ++D +H +D ++
Sbjct 128 NFEEISLKSLGGFILVLN-DNGEIYYASENVENYLGFHQSDVLHQPVYDLIHSEDRDDIR 186
Query 206 EQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDF 265
+QL S+ P A V P S+ R+ R +C
Sbjct 187 QQLDSNFHIPTS---SASNQFDV---FAPQNSKYL---ERNVNARFRCL----------L 227
Query 266 PSTCSKKKAD-RKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHV 324
+TC + D R ++H G S+ MG C + V
Sbjct 228 DNTCGFLRIDMRGKLMSLH--GLPSSY---VMGRTASGPVLGMICVCTPFVP-------- 274
Query 325 VPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGH 384
P ++ + M ++H +DG V +DQ+ +L + + L Y H +D
Sbjct 275 ---PSTSDLASEDMILKTKHQLDGALVSMDQKVYEMLE-IDETDLPMPLYNLVHVEDAVC 330
Query 385 LAECHRQVLQ 394
+AE H++ ++
Sbjct 331 MAEAHKEAIK 340
>sp|G5EGD2|HIF1_CAEEL Hypoxia-inducible factor 1 OS=Caenorhabditis
elegans OX=6239 GN=hif-1 PE=1 SV=1
Length=719
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Query 70 IKNAREAHSQIEKRRRDKMNSFIDELASLVPTCN-AMSRKLDKLTVLRMAVQHMKTLRGA 128
++ RE + RR K + D+L VP LD++ +LR+A + + A
Sbjct 9 MERRRETSRHAARDRRSKESDIFDDLKMCVPIVEEGTVTHLDRIALLRVAATICRLRKTA 68
Query 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
N E N ++ + I DGF+ +V D IL+V+ESV L +Q DL
Sbjct 69 GN-VLENNLDNEITNEVWTEDTIAECLDGFVMIVDSD-SSILYVTESVAMYLGLTQTDLT 126
Query 189 GQSLFDYLHPKDIAKVKEQ 207
G++L D+LHP D + +Q
Sbjct 127 GRALRDFLHPSDYDEFDKQ 145
Score = 34.3 bits (77), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/67 (27%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKI 399
+ +RH D + FV + IL + L+GTS YE H D+ +++ +++ + I
Sbjct 236 FTTRHTCDMRITFVSDKFNYILKSELKTLMGTSFYELVHPADMMIVSKSMKELF-AKGHI 294
Query 400 TTNCYKF 406
T Y+
Sbjct 295 RTPYYRL 301
>sp|Q8CJH6|NPAS4_RAT Neuronal PAS domain-containing protein 4
OS=Rattus norvegicus OX=10116 GN=Npas4 PE=1 SV=1
Length=802
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (52%), Gaps = 7/145 (5%)
Query 82 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPT- 140
K RRD++N+ I L L+P A +L L ++ +A + T +G PT
Sbjct 10 KARRDQINAEIRNLKELLPLAEADKVRLSYLHIMSLAC--IYTRKGVFFAGGTPLAGPTG 67
Query 141 FLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQ--SLFDYLHP 198
LS EL+ I+ A GFL V + GK+L++SESV + L +S DL+ Q S++D + P
Sbjct 68 LLSAQELED-IVAALPGFLLVFTAE-GKLLYLSESVSEHLGHSMVDLVAQGDSIYDIIDP 125
Query 199 KDIAKVKEQLSSSDTAPRERLIDAK 223
D V++QL+ +RL +
Sbjct 126 ADHLTVRQQLTMPSALDADRLFRCR 150
Score = 33.9 bits (76), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/84 (24%), Positives = 35/84 (42%), Gaps = 1/84 (1%)
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKI 399
+ SRHA D + + + L + ELL S Y H +D+ H + H ++L I
Sbjct 219 FQSRHAKDLALLDISESVLIYLGFERSELLCKSWYGLLHPEDLAHASSQHYRLLAENGDI 278
Query 400 TTN-CYKFKIKDGSFITLRSRWFS 422
+ + K G + + +S
Sbjct 279 QAEMVVRLQAKHGGWTWIYCMLYS 302
Score = 33.9 bits (76), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/39 (36%), Positives = 25/39 (64%), Gaps = 0/39 (0%)
Query 169 ILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQ 207
+L +SESV L + +++L+ +S + LHP+D+A Q
Sbjct 229 LLDISESVLIYLGFERSELLCKSWYGLLHPEDLAHASSQ 267
>sp|Q8BGD7|NPAS4_MOUSE Neuronal PAS domain-containing protein
4 OS=Mus musculus OX=10090 GN=Npas4 PE=1 SV=1
Length=802
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (52%), Gaps = 7/145 (5%)
Query 82 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPT- 140
K RRD++N+ I L L+P A +L L ++ +A + T +G PT
Sbjct 10 KARRDQINAEIRNLKELLPLAEADKVRLSYLHIMSLAC--IYTRKGVFFAGGTPLAGPTG 67
Query 141 FLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQ--SLFDYLHP 198
LS EL+ I+ A GFL V + GK+L++SESV + L +S DL+ Q S++D + P
Sbjct 68 LLSAQELED-IVAALPGFLLVFTAE-GKLLYLSESVSEHLGHSMVDLVAQGDSIYDIIDP 125
Query 199 KDIAKVKEQLSSSDTAPRERLIDAK 223
D V++QL+ +RL +
Sbjct 126 ADHLTVRQQLTMPSALDADRLFRCR 150
Score = 35.0 bits (79), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (67%), Gaps = 0/39 (0%)
Query 169 ILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQ 207
+L VSESV L + +++L+ +S + LHP+D+A+ Q
Sbjct 229 LLDVSESVLIYLGFERSELLCKSWYGLLHPEDLAQASSQ 267
>sp|Q8IUM7|NPAS4_HUMAN Neuronal PAS domain-containing protein
4 OS=Homo sapiens OX=9606 GN=NPAS4 PE=1 SV=1
Length=802
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/142 (34%), Positives = 74/142 (52%), Gaps = 7/142 (5%)
Query 82 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPT- 140
K RRD++N+ I L L+P A +L L ++ +A + T +G PT
Sbjct 10 KARRDQINAEIRNLKELLPLAEADKVRLSYLHIMSLAC--IYTRKGVFFAGGTPLAGPTG 67
Query 141 FLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQ--SLFDYLHP 198
LS EL+ I+ A GFL V + GK+L++SESV + L +S DL+ Q S++D + P
Sbjct 68 LLSAQELED-IVAALPGFLLVFTAE-GKLLYLSESVSEHLGHSMVDLVAQGDSIYDIIDP 125
Query 199 KDIAKVKEQLSSSDTAPRERLI 220
D V++QL+ +RL
Sbjct 126 ADHLTVRQQLTLPSALDTDRLF 147
Score = 35.4 bits (80), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 85/232 (37%), Gaps = 41/232 (18%)
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKI 399
+ SRHA D + + + L + ELL S Y H +D+ H + H ++L I
Sbjct 217 FQSRHAKDLALLDISESVLIYLGFERSELLCKSWYGLLHPEDLAHASAQHYRLLAESGDI 276
Query 400 TTN-CYKFKIKDGSF---------------ITLRSRWFSFMNPWT---------KEVEYI 434
+ + K G + IT + S M W+ + Y+
Sbjct 277 QAEMVVRLQAKTGGWAWIYCLLYSEGPEGPITANNYPISDMEAWSLRQQLNSEDTQAAYV 336
Query 435 VSTNTVVLANVLEGGDPTFPQLTASPH---SMDSMLPSGEGGPKRT-HPTVPGIPGGTRA 490
+ T T++ P+FP+ S S + + + G P+ T P+ P + +
Sbjct 337 LGTPTML---------PSFPENILSQEECSSTNPLFTAALGAPRSTSFPSAPEL--SVVS 385
Query 491 GAGKIGRMIAE-EIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKIL 541
+ ++ R E + + G PS ++ TPP PGG L
Sbjct 386 ASEELPRPSKELDFSYLTFPSGPEPSLQAELSKDLVCTPPYTPHQPGGCAFL 437
Score = 33.9 bits (76), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/39 (36%), Positives = 25/39 (64%), Gaps = 0/39 (0%)
Query 169 ILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQ 207
+L +SESV L + +++L+ +S + LHP+D+A Q
Sbjct 227 LLDISESVLIYLGFERSELLCKSWYGLLHPEDLAHASAQ 265
>sp|P90953|HLH34_CAEEL Helix-loop-helix 34 OS=Caenorhabditis elegans
OX=6239 GN=hlh-34 PE=2 SV=3
Length=322
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/139 (31%), Positives = 76/139 (55%), Gaps = 8/139 (6%)
Query 78 SQIEKRRRDKMNSFIDELASLVPTCNAMS-RKLDKLTVLRMAVQHMK---TLRGATNPYT 133
SQ ++RR+ + F +LA+ +P A+S + +DK T++R+A ++K + Y+
Sbjct 15 SQAQQRRQMENYEF-SQLANELPLARAISGQHIDKTTMVRLATAYIKLHNIFGQSQRAYS 73
Query 134 EANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLF 193
A+Y + SD + L DGF FV+ RG +L++SE++ L SQ ++ G ++
Sbjct 74 SADYY--YGSDSLWTNNHLDLLDGF-FVILDRRGDVLYISETISIYLGLSQVEMTGNAMV 130
Query 194 DYLHPKDIAKVKEQLSSSD 212
DY+H +DI L+ D
Sbjct 131 DYIHEQDINCFNSALNYCD 149
>sp|G5EFL9|NPASH_CAEEL PAS domain-containing protein cky-1 OS=Caenorhabditis
elegans OX=6239 GN=cky-1 PE=1 SV=1
Length=676
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 137/345 (40%), Gaps = 55/345 (16%)
Query 82 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTF 141
K+RRD++N I +L L+P + + +L +L V+ + ++ R
Sbjct 86 KQRRDQINVEIQKLRDLLPLSDLIKDRLFQLQVMSLGCIFIRKHRYQQTVLQPQLQMLQM 145
Query 142 LSDDELKHL--ILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI--GQSLFDYLH 197
+ I +A GF+ +V GKIL VS++ + L +S +++ G S++D +
Sbjct 146 QMSSPMPRGIDICKALRGFMLMV-TRSGKILHVSDNASEYLGHSVEEIMCQGDSIYDLVD 204
Query 198 PKDIAKVKEQLSS----SDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKC 253
+D V+ +L+S + T P ER+ F CR+
Sbjct 205 GRDHGAVQAELASGPPGAATFPEERV---------------------------FICRLNL 237
Query 254 NRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSC 313
R +K++ F Y++ + ++++PD C+
Sbjct 238 AR-------------TAKRQLQYHKFVLFQGR-YIQPAEFYQQLNAQNSQPD---CDQPV 280
Query 314 LVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSC 373
A + + P+ G + + ++H +D KF D A+ L + ++L G S
Sbjct 281 FSAYCQ--PLINPENAEGMSTGNTHVFSTQHYLDMKFKEADTMASQHLGFSKEQLKGMSW 338
Query 374 YEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRS 418
Y H + + +A HR + Q +E + + +G +I L +
Sbjct 339 YGMIHPNHVPEIAHKHRLLCQEKEGSVLALIRLQAANGEWIWLHT 383
>sp|Q65ZG8|PER_CAEEL Period protein homolog lin-42 OS=Caenorhabditis
elegans OX=6239 GN=lin-42 PE=1 SV=1
Length=597
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 55/103 (53%), Gaps = 2/103 (2%)
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKI 399
++++H+ +D + L LP +L+G S + + D+ + + H + +R KI
Sbjct 169 FITKHSSTCALTHIDYASIPYLGLLPTDLIGKSLLAFVYSPDVHVVRQAHIDLHNSRGKI 228
Query 400 TTNCYKFKI--KDGSFITLRSRWFSFMNPWTKEVEYIVSTNTV 440
+ ++ +GS + ++ W +++NPWT+++E +V+ + +
Sbjct 229 VKSIADLRLVAHNGSILRCQTEWSAYVNPWTRKMELVVARHRI 271
>sp|Q1ECW2|NPS4A_DANRE Neuronal PAS domain-containing protein
4A OS=Danio rerio OX=7955 GN=npas4a PE=2 SV=1
Length=933
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 77/147 (52%), Gaps = 7/147 (5%)
Query 82 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM-KTLRGATNPYTEANYKPT 140
K RRD++N+ I L L+P +A +L L ++ +A + K++ + + T ++ + T
Sbjct 10 KARRDQINAEIRNLKDLLPISDADKSRLSYLHIMSLACMYTRKSVFFSQDITTASSAEET 69
Query 141 --FLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQ--SLFDYL 196
FLS EL LI + GFL ++ GK+L++S+SV L +S DL+ Q S++D +
Sbjct 70 TGFLSFYELNELI-QGMPGFLLLL-TGEGKLLYLSDSVSDHLGHSMVDLVAQGDSVYDII 127
Query 197 HPKDIAKVKEQLSSSDTAPRERLIDAK 223
D ++ L + +RL +
Sbjct 128 DTADHFIMRSNLVPPTSPDTDRLFRCR 154
>sp|E7FFX1|NPS4B_DANRE Neuronal PAS domain-containing protein
4B OS=Danio rerio OX=7955 GN=npas4b PE=3 SV=1
Length=844
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 4/144 (3%)
Query 82 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTF 141
K RRD++N+ I L L+P +A +L L ++ +A + + + +
Sbjct 71 KARRDQINAEIRSLKELLPISDADKARLSYLHIMSLACIYTRKSVFFSQAAAGHGMSGSL 130
Query 142 LSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQ--SLFDYLHPK 199
LS EL L L GFL V+ + GK+L++S++V + L +S DL+ Q S++D + P
Sbjct 131 LSLPELSDL-LHTLPGFLLVLTSE-GKLLYLSDNVAEHLGHSMVDLVAQSDSVYDIIDPV 188
Query 200 DIAKVKEQLSSSDTAPRERLIDAK 223
D ++ L T +RL +
Sbjct 189 DHFIMRGNLVPITTPDTDRLFRCR 212
>sp|Q5A1E3|CBF1_CANAL Transcriptional regulator CBF1 OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=CBF1
PE=1 SV=2
Length=251
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 24/122 (20%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
PHG E+ H+ R RE H ++E++RR+ +N+ I ELA L+PT + +K +L+
Sbjct 143 PHGSEEW--HRQR----RENHKEVERKRRESINTGIRELARLIPTTDT-----NKAQILQ 191
Query 117 MAVQHMKTLRGATNP----------YTEANYKPTFLSDDELKHLILRAADGFLFVVGCDR 166
AV+++K L+ N TE S+++LKH + A + + R
Sbjct 192 RAVEYIKRLKENENNNIEKWTLEKLLTEQAVSELSASNEKLKHELESA---YREIEQLKR 248
Query 167 GK 168
GK
Sbjct 249 GK 250
>sp|Q9NQ87|HEYL_HUMAN Hairy/enhancer-of-split related with YRPW
motif-like protein OS=Homo sapiens OX=9606 GN=HEYL PE=1 SV=2
Length=328
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (51%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query 72 NAREAHSQI-EKRRRDKMNSFIDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTL 125
AR+ H I EKRRRD++NS + EL LVPT S KL+K VL+M V H+K L
Sbjct 42 QARKKHRGIIEKRRRDRINSSLSELRRLVPTAFEKQGSSKLEKAEVLQMTVDHLKML 98
>sp|Q0JNI9|PIL15_ORYSJ Transcription factor PHYTOCHROME INTERACTING
FACTOR-LIKE 15 OS=Oryza sativa subsp. japonica OX=39947
GN=PIL15 PE=1 SV=2
Length=637
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 8/94 (9%)
Query 36 NRKRK-GSSTDYQESMDTDKDDPHG--RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFI 92
+KRK + + S D D DD G R T R + A E H+ E+RRRD++N +
Sbjct 346 QQKRKCQAQAECSASQDDDLDDEPGVLRKSGTRSTKRSRTA-EVHNLSERRRRDRINEKM 404
Query 93 DELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
L L+P CN K+DK ++L A++++KTL+
Sbjct 405 RALQELIPNCN----KIDKASMLDEAIEYLKTLQ 434
>sp|Q9DBX7|HEYL_MOUSE Hairy/enhancer-of-split related with YRPW
motif-like protein OS=Mus musculus OX=10090 GN=Heyl PE=1 SV=2
Length=326
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 32/48 (67%), Gaps = 2/48 (4%)
Query 80 IEKRRRDKMNSFIDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTL 125
IEKRRRD++NS + EL LVPT S KL+K VL+M V H+K L
Sbjct 51 IEKRRRDRINSSLSELRRLVPTAFEKQGSSKLEKAEVLQMTVDHLKML 98
>sp|Q2NL18|HEYL_BOVIN Hairy/enhancer-of-split related with YRPW
motif-like protein OS=Bos taurus OX=9913 GN=HEYL PE=2 SV=3
Length=328
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 32/48 (67%), Gaps = 2/48 (4%)
Query 80 IEKRRRDKMNSFIDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTL 125
IEKRRRD++NS + EL LVPT S KL+K VL+M V H+K L
Sbjct 51 IEKRRRDRINSSLSELRRLVPTAFEKQGSSKLEKAEVLQMTVDHLKML 98
>sp|Q9UBP5|HEY2_HUMAN Hairy/enhancer-of-split related with YRPW
motif protein 2 OS=Homo sapiens OX=9606 GN=HEY2 PE=1 SV=1
Length=337
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query 42 SSTDYQESMDTDKDDPHG--------RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFID 93
S +D E++D ++ + RL +I ++ IEKRRRD++N+ +
Sbjct 10 SESDMDETIDVGSENNYSGQSTSSVIRLNSPTTTSQIMARKKRRGIIEKRRRDRINNSLS 69
Query 94 ELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRG 127
EL LVPT S KL+K +L+M V H+K L+
Sbjct 70 ELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQA 105
>sp|Q7KM13|HEY_DROME Hairy/enhancer-of-split related with YRPW
motif protein OS=Drosophila melanogaster OX=7227 GN=Hey PE=2
SV=1
Length=425
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%), Gaps = 2/52 (4%)
Query 80 IEKRRRDKMNSFIDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGAT 129
IEK+RRD++NS + EL LVP+ S KL+K +L++ V+H+K+L+ T
Sbjct 108 IEKKRRDRINSSLTELKRLVPSAYEKQGSAKLEKAEILQLTVEHLKSLQSKT 159
>sp|Q15853|USF2_HUMAN Upstream stimulatory factor 2 OS=Homo sapiens
OX=9606 GN=USF2 PE=1 SV=1
Length=346
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/83 (34%), Positives = 48/83 (58%), Gaps = 5/83 (6%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK--LDKLTVLRMAVQHMKTLR 126
R + R H+++E+RRRDK+N++I +L+ ++P CNA + K K +L A +++ LR
Sbjct 232 RDERRRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNSKTGASKGGILSKACDYIRELR 291
Query 127 GATNPYTEANYKPT--FLSDDEL 147
TN + +K D+EL
Sbjct 292 -QTNQRMQETFKEAERLQMDNEL 313
>sp|A6NFD8|HELT_HUMAN Hairy and enhancer of split-related protein
HELT OS=Homo sapiens OX=9606 GN=HELT PE=2 SV=2
Length=242
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query 76 AHSQIEKRRRDKMNSFIDELASLVPTCNAM--SRKLDKLTVLRMAVQHMKTLRGATNP 131
+H IEKRRRD++N ++EL VP A S KL+K +L M VQ+++ L A P
Sbjct 14 SHKVIEKRRRDRINRCLNELGKTVPMALAKQSSGKLEKAEILEMTVQYLRALHSADFP 71
>sp|Q7TS99|HELT_MOUSE Hairy and enhancer of split-related protein
HELT OS=Mus musculus OX=10090 GN=Helt PE=1 SV=1
Length=240
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query 76 AHSQIEKRRRDKMNSFIDELASLVPTCNAM--SRKLDKLTVLRMAVQHMKTLRGATNP 131
+H IEKRRRD++N ++EL VP A S KL+K +L M VQ+++ L A P
Sbjct 14 SHKVIEKRRRDRINRCLNELGKTVPMALAKQSSGKLEKAEILEMTVQYLRALHSADFP 71
>sp|P0DOC7|NPS4L_DANRE Neuronal PAS domain-containing protein
4-like OS=Danio rerio OX=7955 GN=npas4l PE=2 SV=1
Length=647
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 67/153 (44%), Gaps = 28/153 (18%)
Query 82 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT---LRGATNPYT----- 133
K RRD+MNS I L +L+P + +L L + + +++ LRG T
Sbjct 26 KARRDQMNSEIRNLRALLPI--SPEHRLSYLHSMSITCTYIRKSVELRGVCEESTVFSAV 83
Query 134 ----------------EANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVF 177
E + L + L+ +L+A GF+ D GK+L+VSE+V
Sbjct 84 NGCVPQDCALQDCALQECVLQECVLQECVLQECVLQALPGFIVAFTTD-GKLLYVSENVH 142
Query 178 KILNYSQNDLI-GQSLFDYLHPKDIAKVKEQLS 209
+ L S D++ S FD L D+ V+ L+
Sbjct 143 EYLGLSMVDVLQSDSFFDMLDRSDVEAVRSVLA 175
Score = 38.5 bits (88), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/115 (22%), Positives = 47/115 (41%), Gaps = 5/115 (4%)
Query 327 QPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLA 386
+P + ++ ++ + H+ D + L + EL+G S YE H DD+ H A
Sbjct 220 RPTADRLPARNADFHTHHSADMRLASASSSVLFHLGFSADELIGRSWYELLHPDDLRHAA 279
Query 387 ECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 441
+ H +L + + KD S++ W T E + I +N ++
Sbjct 280 DRHAAILAAATADAEMLIRVQCKDLSWV-----WMYTHASATAERDAISCSNYMI 329
>sp|Q6QB00|HELT_DANRE Hairy and enhancer of split-related protein
helt OS=Danio rerio OX=7955 GN=helt PE=2 SV=1
Length=270
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query 76 AHSQIEKRRRDKMNSFIDELASLVPTCNAM--SRKLDKLTVLRMAVQHMKTLRGATNP 131
+H IEKRRRD++N ++EL VP A S KL+K +L M VQ+++ L A P
Sbjct 63 SHKVIEKRRRDRINRCLNELGKTVPMALAKQNSGKLEKAEILEMTVQYLRALHSADFP 120
>sp|Q8AXV6|HEY1_DANRE Hairy/enhancer-of-split related with YRPW
motif protein 1 OS=Danio rerio OX=7955 GN=hey1 PE=2 SV=1
Length=317
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (65%), Gaps = 2/51 (4%)
Query 80 IEKRRRDKMNSFIDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGA 128
IEKRRRD++N+ + EL LVP+ S KL+K +L+M V H+K L A
Sbjct 56 IEKRRRDRINNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHAA 106
>sp|Q9QUS4|HEY2_MOUSE Hairy/enhancer-of-split related with YRPW
motif protein 2 OS=Mus musculus OX=10090 GN=Hey2 PE=1 SV=1
Length=339
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query 80 IEKRRRDKMNSFIDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRG 127
IEKRRRD++N+ + EL LVPT S KL+K +L+M V H+K L+
Sbjct 56 IEKRRRDRINNSLSELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQA 105
>sp|Q9I9L0|HEY2_DANRE Hairy/enhancer-of-split related with YRPW
motif protein 2 OS=Danio rerio OX=7955 GN=hey2 PE=2 SV=2
Length=324
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query 80 IEKRRRDKMNSFIDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRG 127
IEKRRRD++N+ + EL LVPT S KL+K +L+M V H+K L+
Sbjct 56 IEKRRRDRINNSLSELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQA 105
>sp|Q2KIN4|HEY1_BOVIN Hairy/enhancer-of-split related with YRPW
motif protein 1 OS=Bos taurus OX=9913 GN=HEY1 PE=2 SV=1
Length=304
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (65%), Gaps = 2/51 (4%)
Query 80 IEKRRRDKMNSFIDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGA 128
IEKRRRD++N+ + EL LVP+ S KL+K +L+M V H+K L A
Sbjct 57 IEKRRRDRINNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHTA 107
>sp|Q9Y5J3|HEY1_HUMAN Hairy/enhancer-of-split related with YRPW
motif protein 1 OS=Homo sapiens OX=9606 GN=HEY1 PE=1 SV=1
Length=304
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (65%), Gaps = 2/51 (4%)
Query 80 IEKRRRDKMNSFIDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGA 128
IEKRRRD++N+ + EL LVP+ S KL+K +L+M V H+K L A
Sbjct 57 IEKRRRDRINNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHTA 107
>sp|Q9TSZ2|HEY1_CANLF Hairy/enhancer-of-split related with YRPW
motif protein 1 OS=Canis lupus familiaris OX=9615 GN=HEY1
PE=2 SV=1
Length=304
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (65%), Gaps = 2/51 (4%)
Query 80 IEKRRRDKMNSFIDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGA 128
IEKRRRD++N+ + EL LVP+ S KL+K +L+M V H+K L A
Sbjct 57 IEKRRRDRINNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHTA 107
>sp|Q6AT90|APG_ORYSJ Transcription factor APG OS=Oryza sativa
subsp. japonica OX=39947 GN=APG PE=1 SV=1
Length=505
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/93 (27%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query 34 DCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFID 93
D + + + Q+ +D D + + E H+ E+RRRD++N +
Sbjct 297 DSHNNQSAEWSASQDELDLDDELAGVHRRSAARSSKRSRTAEVHNLSERRRRDRINEKMR 356
Query 94 ELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
L L+P CN K+DK ++L A++++KTL+
Sbjct 357 ALQELIPNCN----KIDKASMLEEAIEYLKTLQ 385
>sp|Q9WV93|HEY1_MOUSE Hairy/enhancer-of-split related with YRPW
motif protein 1 OS=Mus musculus OX=10090 GN=Hey1 PE=1 SV=1
Length=299
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (65%), Gaps = 2/51 (4%)
Query 80 IEKRRRDKMNSFIDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGA 128
IEKRRRD++N+ + EL LVP+ S KL+K +L+M V H+K L A
Sbjct 57 IEKRRRDRINNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHTA 107
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis
thaliana OX=3702 GN=PIF1 PE=1 SV=1
Length=478
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query 31 SGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNS 90
+ VD ++++ +T E+ ++ R+ T + A E H+ E++RRD++N
Sbjct 245 TNVDDRKRKEREATTTDETESRSEETKQARVSTTS--TKRSRAAEVHNLSERKRRDRINE 302
Query 91 FIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
+ L L+P CN K DK ++L A+++MK+L+
Sbjct 303 RMKALQELIPRCN----KSDKASMLDEAIEYMKSLQ 334
>sp|Q66KK8|HEY1_XENTR Hairy/enhancer-of-split related with YRPW
motif protein 1 OS=Xenopus tropicalis OX=8364 GN=hey1 PE=2
SV=1
Length=300
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (65%), Gaps = 2/51 (4%)
Query 80 IEKRRRDKMNSFIDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGA 128
IEKRRRD++N+ + EL LVP+ S KL+K +L+M V H+K L A
Sbjct 56 IEKRRRDRINNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHTA 106
>sp|Q9I8A3|HEY1_XENLA Hairy/enhancer-of-split related with YRPW
motif protein 1 OS=Xenopus laevis OX=8355 GN=hey1 PE=1 SV=1
Length=294
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (65%), Gaps = 2/51 (4%)
Query 80 IEKRRRDKMNSFIDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGA 128
IEKRRRD++N+ + EL LVP+ S KL+K +L+M V H+K L A
Sbjct 52 IEKRRRDRINNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHTA 102
>sp|Q63665|USF2_RAT Upstream stimulatory factor 2 OS=Rattus norvegicus
OX=10116 GN=Usf2 PE=1 SV=2
Length=346
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/83 (33%), Positives = 48/83 (58%), Gaps = 5/83 (6%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK--LDKLTVLRMAVQHMKTLR 126
R + R H+++E+RRRDK+N++I +L+ ++P C+A + K K +L A +++ LR
Sbjct 232 RDERRRAQHNEVERRRRDKINNWIVQLSKIIPDCHADNSKTGASKGGILSKACDYIRELR 291
Query 127 GATNPYTEANYKPT--FLSDDEL 147
TN + +K D+EL
Sbjct 292 -QTNQRMQETFKEAERLQMDNEL 313
>sp|Q64705|USF2_MOUSE Upstream stimulatory factor 2 OS=Mus musculus
OX=10090 GN=Usf2 PE=1 SV=1
Length=346
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/83 (33%), Positives = 48/83 (58%), Gaps = 5/83 (6%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK--LDKLTVLRMAVQHMKTLR 126
R + R H+++E+RRRDK+N++I +L+ ++P C+A + K K +L A +++ LR
Sbjct 232 RDERRRAQHNEVERRRRDKINNWIVQLSKIIPDCHADNSKTGASKGGILSKACDYIRELR 291
Query 127 GATNPYTEANYKPT--FLSDDEL 147
TN + +K D+EL
Sbjct 292 -QTNQRMQETFKEAERLQMDNEL 313
>sp|Q9VGZ5|CWO_DROME Transcription factor cwo OS=Drosophila melanogaster
OX=7227 GN=cwo PE=1 SV=2
Length=698
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 23/127 (18%)
Query 69 RIKNARE---AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK----LDKLTVLRMAVQH 121
R K +R+ +H IEKRRRD+MNS + +L+ L+P RK ++K ++ MA++H
Sbjct 56 RNKTSRQDPLSHRIIEKRRRDRMNSCLADLSRLIPP--QYQRKGRGRIEKTEIIEMAIRH 113
Query 122 MKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVG----CDR--GKILFVSES 175
+K L+ E++Y+ ++ ++ A FL+ V C R G++ +
Sbjct 114 LKHLQSECQ-QKESDYRSGYMD-------CMKEAAKFLYDVHMQDFCHRLLGRLQEHIDE 165
Query 176 VFKILNY 182
+FK Y
Sbjct 166 MFKTDCY 172
>sp|Q10CH5|PIL13_ORYSJ Transcription factor PHYTOCHROME INTERACTING
FACTOR-LIKE 13 OS=Oryza sativa subsp. japonica OX=39947
GN=PIL13 PE=1 SV=1
Length=410
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/58 (38%), Positives = 36/58 (62%), Gaps = 4/58 (7%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
R A E H+ E+RRRD++N + L L+P CN K DK ++L A++++K+L+
Sbjct 217 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCN----KTDKASILDEAIEYLKSLQ 270
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis
thaliana OX=3702 GN=PIF3 PE=1 SV=1
Length=524
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (32%), Positives = 47/82 (57%), Gaps = 8/82 (10%)
Query 49 SMDTDKDDPHGRLEYTEHQGRIKNAR----EAHSQIEKRRRDKMNSFIDELASLVPTCNA 104
S D +++ GR E + + + R E H+ E+RRRD++N + L L+P CN
Sbjct 316 SEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCN- 374
Query 105 MSRKLDKLTVLRMAVQHMKTLR 126
K+DK ++L A++++K+L+
Sbjct 375 ---KVDKASMLDEAIEYLKSLQ 393
>sp|Q8AXV5|HEYL_DANRE Hairy/enhancer-of-split related with YRPW
motif-like protein OS=Danio rerio OX=7955 GN=heyl PE=2 SV=2
Length=310
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/48 (48%), Positives = 31/48 (65%), Gaps = 2/48 (4%)
Query 80 IEKRRRDKMNSFIDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTL 125
IEKRRRD++N + EL LVP+ S KL+K +L+M V H+K L
Sbjct 51 IEKRRRDRINHSLSELRRLVPSAFEKQGSSKLEKAEILQMTVDHLKLL 98
>sp|O43019|SRE2_SCHPO Putative transcription factor sre2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) OX=284812
GN=sre2 PE=1 SV=1
Length=793
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 16/79 (20%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNA----------------MSRKLDKLTVLRM 117
R AH+ IEKR R +N I EL VPT + +SRKL+K T+L
Sbjct 428 RSAHNMIEKRYRSNLNDKIAELRDAVPTLRSGYNSTTADELKGTYVPLSRKLNKATILSK 487
Query 118 AVQHMKTLRGATNPYTEAN 136
A +++K+L+ E N
Sbjct 488 ATEYIKSLQSKNKKLIEEN 506
>sp|Q6XBT4|USF1_BOVIN Upstream stimulatory factor 1 OS=Bos taurus
OX=9913 GN=USF1 PE=2 SV=1
Length=310
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (62%), Gaps = 2/68 (3%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK--LDKLTVLRMAVQHMKTLR 126
R + R H+++E+RRRDK+N++I +L+ ++P C+ S K K +L A +++ LR
Sbjct 196 RDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELR 255
Query 127 GATNPYTE 134
+ + +E
Sbjct 256 QSNHRLSE 263
>sp|P22415|USF1_HUMAN Upstream stimulatory factor 1 OS=Homo sapiens
OX=9606 GN=USF1 PE=1 SV=1
Length=310
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (62%), Gaps = 2/68 (3%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK--LDKLTVLRMAVQHMKTLR 126
R + R H+++E+RRRDK+N++I +L+ ++P C+ S K K +L A +++ LR
Sbjct 196 RDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELR 255
Query 127 GATNPYTE 134
+ + +E
Sbjct 256 QSNHRLSE 263
>sp|O02818|USF1_RABIT Upstream stimulatory factor 1 OS=Oryctolagus
cuniculus OX=9986 GN=USF1 PE=2 SV=1
Length=310
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (62%), Gaps = 2/68 (3%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK--LDKLTVLRMAVQHMKTLR 126
R + R H+++E+RRRDK+N++I +L+ ++P C+ S K K +L A +++ LR
Sbjct 196 RDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELR 255
Query 127 GATNPYTE 134
+ + +E
Sbjct 256 QSNHRLSE 263
>sp|Q61069|USF1_MOUSE Upstream stimulatory factor 1 OS=Mus musculus
OX=10090 GN=Usf1 PE=1 SV=1
Length=310
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (62%), Gaps = 2/68 (3%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK--LDKLTVLRMAVQHMKTLR 126
R + R H+++E+RRRDK+N++I +L+ ++P C+ S K K +L A +++ LR
Sbjct 196 RDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELR 255
Query 127 GATNPYTE 134
+ + +E
Sbjct 256 QSNHRLSE 263
>sp|O08609|MLX_MOUSE Max-like protein X OS=Mus musculus OX=10090
GN=Mlx PE=1 SV=1
Length=298
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/57 (37%), Positives = 34/57 (60%), Gaps = 5/57 (9%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAM-----SRKLDKLTVLRMAVQHMKTL 125
R AH+Q E++RRD + D+L ++VPTC S+KL K VL+ + +++ L
Sbjct 131 RRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFL 187
>sp|Q9UH92|MLX_HUMAN Max-like protein X OS=Homo sapiens OX=9606
GN=MLX PE=1 SV=2
Length=298
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/57 (37%), Positives = 34/57 (60%), Gaps = 5/57 (9%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAM-----SRKLDKLTVLRMAVQHMKTL 125
R AH+Q E++RRD + D+L ++VPTC S+KL K VL+ + +++ L
Sbjct 131 RRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFL 187
>sp|Q07957|USF1_XENBO Upstream stimulatory factor 1 OS=Xenopus
borealis OX=8354 GN=usf1 PE=2 SV=1
Length=307
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 2/55 (4%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKL--DKLTVLRMAVQHMKTLR 126
R H+++E+RRRDK+N++I +L+ ++P C+ S K K +L A +++ LR
Sbjct 198 RAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKTGQSKGGILSKACDYIQELR 252
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis
thaliana OX=3702 GN=PIL1 PE=1 SV=1
Length=416
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query 35 CNRKRKGSSTDYQESM------DTDKDDPHGRLEYTEHQGRIKNAR--EAHSQIEKRRRD 86
C+ KRK + +ES D + DD ++ + K R E H E++RRD
Sbjct 184 CSLKRKYGDIEEEESTYLSNNSDDESDDAKTQVHARTRKPVTKRKRSTEVHKLYERKRRD 243
Query 87 KMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
+ N + L L+P C K DK ++L A+++M+TL+
Sbjct 244 EFNKKMRALQDLLPNC----YKDDKASLLDEAIKYMRTLQ 279
>sp|Q9XEF0|BH051_ARATH Transcription factor bHLH51 OS=Arabidopsis
thaliana OX=3702 GN=BHLH51 PE=2 SV=1
Length=254
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 20/102 (20%)
Query 55 DDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTV 114
DD G +E E R +H EKRRRD++NS + L LVP S KLDK +
Sbjct 51 DDCVGGIEKAESLSR------SHRLAEKRRRDRINSHLTALRKLVPN----SDKLDKAAL 100
Query 115 LRMAVQHMKTL--RGATNPY-----TEAN---YKPTFLSDDE 146
L ++ +K L + A +P TEA+ +P +SD E
Sbjct 101 LATVIEQVKELKQKAAESPIFQDLPTEADEVTVQPETISDFE 142
>sp|Q07956|USF_STRPU Upstream stimulatory factor OS=Strongylocentrotus
purpuratus OX=7668 PE=2 SV=1
Length=265
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/35 (43%), Positives = 27/35 (77%), Gaps = 0/35 (0%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCN 103
R + R H+++E+RRRDK+N++I +L+ ++P CN
Sbjct 187 RDERRRATHNEVERRRRDKINNWIVKLSKIIPDCN 221
>sp|O75030|MITF_HUMAN Microphthalmia-associated transcription
factor OS=Homo sapiens OX=9606 GN=MITF PE=1 SV=2
Length=526
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/97 (28%), Positives = 49/97 (51%), Gaps = 5/97 (5%)
Query 64 TEHQGRI----KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
TE + R + ++ H+ IE+RRR +N I EL +L+P N + +K T+L+ +V
Sbjct 299 TESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASV 358
Query 120 QHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAAD 156
+++ L+ E + L +HL+LR +
Sbjct 359 DYIRKLQREQQRAKELENRQKKLEHAN-RHLLLRIQE 394
>sp|Q01371|WC1_NEUCR White collar 1 protein OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 /
FGSC 987) OX=367110 GN=wc-1 PE=1 SV=2
Length=1167
Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/59 (36%), Positives = 33/59 (56%), Gaps = 1/59 (2%)
Query 150 LILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQL 208
++L AD + V+ +G L++S + K+L Y +DL+G SL HP DI V +L
Sbjct 580 MLLENADDVVHVLSL-KGLFLYLSPACKKVLEYDASDLVGTSLSSICHPSDIVPVTREL 637
Score = 39.3 bits (90), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/223 (21%), Positives = 83/223 (37%), Gaps = 31/223 (14%)
Query 305 DNEGCNLSCLVAIGR----LHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
+ +G C++ +GR H +NG I E ++ + G F+FV ++
Sbjct 670 NEQGKGRKCIILVGRKRPVFALHRKDLELNGGI--GDSEIWTKVSTSGMFLFVSSNVRSL 727
Query 361 LAYLPQELLGTSCYEYFHQDD------------IGHLAECHRQVLQTREKITTNCYKFKI 408
L LP+ L GTS + ++ G +A C +V R ++ F
Sbjct 728 LDLLPENLQGTSMQDLMRKESRAEFGRTIEKARKGKIASCKHEVQNKRGQVLQAYTTFYP 787
Query 409 KDG------SFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHS 462
DG +F+ +++ K ++ TV + N+ GG P P S
Sbjct 788 GDGGEGQRPTFLLAQTKLL-------KASSRTLAPATVTVKNMSPGGVPLSPMKGIQTDS 840
Query 463 MDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIME 505
+ L G + T + + AG G+ + A+ I +
Sbjct 841 DSNTLMGGMSKSGSSDSTGAMVSARSSAGPGQDAALDADNIFD 883
>sp|H2KZZ2|HLH30_CAEEL Helix-loop-helix protein 30 OS=Caenorhabditis
elegans OX=6239 GN=hlh-30 PE=1 SV=1
Length=524
Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 0/58 (0%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
R + ++ H+ IE+RRR +N I EL ++P + KL+K T+L+ + +++ L+
Sbjct 260 RDRRKKDIHNMIERRRRYNINDRIKELGQMLPKNTSEDMKLNKGTILKASCDYIRVLQ 317
>sp|Q10186|YAWC_SCHPO Uncharacterized bHLH domain-containing protein
C3F10.12c OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) OX=284812 GN=SPAC3F10.12c PE=3 SV=1
Length=201
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/97 (25%), Positives = 49/97 (51%), Gaps = 8/97 (8%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
K R +H ++E+RRR+ ++ I ELA++VP C +K ++L+ Q++++L+
Sbjct 87 KAKRLSHKEVERRRREAISEGIKELANIVPGCEK-----NKGSILQRTAQYIRSLKEMEE 141
Query 131 PYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRG 167
E + ++D ++ L A + C+R
Sbjct 142 MCREKSNLEKLVADHTIQEL---ARENARLKSECERA 175
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis
thaliana OX=3702 GN=BHLH56 PE=3 SV=2
Length=445
Score = 41.6 bits (96), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query 48 ESMDTDKDDPHGRLEYTEHQGRIKN-AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMS 106
ES +++ HG E R ++ E H+ E+RRR+K+N + L L+P CN
Sbjct 230 ESKLKAREETHGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCN--- 286
Query 107 RKLDKLTVLRMAVQHMKTL----RGATNPYTEANYKPTFL 142
K K++ L A++++K+L +G +P A F+
Sbjct 287 -KSTKVSTLDDAIEYVKSLQSQIQGMMSPMMNAGNTQQFM 325
>sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis
thaliana OX=3702 GN=BHLH127 PE=2 SV=1
Length=307
Score = 41.2 bits (95), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/83 (28%), Positives = 41/83 (49%), Gaps = 9/83 (11%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
A E H+ E+RRR+K+N + L L+P CN K K+++L ++++K+L N +
Sbjct 151 AAEMHNLAERRRREKINERMKTLQQLIPRCN----KSTKVSMLEDVIEYVKSLEMQINQF 206
Query 133 TE-----ANYKPTFLSDDELKHL 150
N P ++ H+
Sbjct 207 MPHMAMGMNQPPAYIPFPSQAHM 229
>sp|Q64092|TFE3_MOUSE Transcription factor E3 OS=Mus musculus
OX=10090 GN=Tfe3 PE=1 SV=2
Length=572
Score = 41.6 bits (96), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query 57 PHGRLEYTEHQGRI----KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 112
P+ + E +E + + + ++ H+ IE+RRR +N I EL +L+P N + +K
Sbjct 326 PNIKREISETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPEMRWNKG 385
Query 113 TVLRMAVQHMKTLR 126
T+L+ +V +++ L+
Sbjct 386 TILKASVDYIRKLQ 399
>sp|P19484|TFEB_HUMAN Transcription factor EB OS=Homo sapiens
OX=9606 GN=TFEB PE=1 SV=3
Length=476
Score = 41.2 bits (95), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 35/56 (63%), Gaps = 0/56 (0%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
+ ++ H+ IE+RRR +N I EL L+P N + + +K T+L+ +V +++ ++
Sbjct 234 RQKKDNHNLIERRRRFNINDRIKELGMLIPKANDLDVRWNKGTILKASVDYIRRMQ 289
>sp|Q5RAI7|BHE40_PONAB Class E basic helix-loop-helix protein
40 OS=Pongo abelii OX=9601 GN=BHLHE40 PE=2 SV=1
Length=412
Score = 40.8 bits (94), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 29/174 (17%)
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSR--KLDKLTVLRMAVQHMKTLRGATNPYTE 134
H IEK+RRD++N I +L L+P ++ L+K VL + ++H+K L
Sbjct 57 HRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKAL--------- 107
Query 135 ANYKPTFLSDDELKHLILRAAD---GFLFVVGCDRGKILFVS------ESVFKILNYSQN 185
T L D + + +I + G L + G+ +F S V + L +N
Sbjct 108 -----TNLIDQQQQKIIALQSGLQAGELSGRNVETGQEMFCSGFQTCAREVLQYLAKHEN 162
Query 186 --DLIGQSLFDYLH--PKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPG 235
DL L +LH ++ + SSD AP+ K P K PG
Sbjct 163 TRDLKSSQLVTHLHRVVSELLQGGTSRKSSDPAPKVMDFKEKPSSPAKGSEGPG 216
>sp|Q9R210|TFEB_MOUSE Transcription factor EB OS=Mus musculus
OX=10090 GN=Tfeb PE=1 SV=2
Length=475
Score = 41.2 bits (95), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 35/56 (63%), Gaps = 0/56 (0%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
+ ++ H+ IE+RRR +N I EL L+P N + + +K T+L+ +V +++ ++
Sbjct 233 RQKKDNHNLIERRRRFNINDRIKELGMLIPKANDLDVRWNKGTILKASVDYIRRMQ 288
>sp|O88368|MITF_RAT Microphthalmia-associated transcription factor
OS=Rattus norvegicus OX=10116 GN=Mitf PE=2 SV=2
Length=526
Score = 40.8 bits (94), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/97 (27%), Positives = 49/97 (51%), Gaps = 5/97 (5%)
Query 64 TEHQGRI----KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
TE + R + ++ H+ IE+RRR +N I EL +L+P N + +K T+L+ +V
Sbjct 299 TESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASV 358
Query 120 QHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAAD 156
+++ L+ + + L +HL+LR +
Sbjct 359 DYIRKLQREQQRAKDLENRQKKLEHAN-RHLLLRVQE 394
>sp|Q08874|MITF_MOUSE Microphthalmia-associated transcription
factor OS=Mus musculus OX=10090 GN=Mitf PE=1 SV=4
Length=526
Score = 40.8 bits (94), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/97 (27%), Positives = 49/97 (51%), Gaps = 5/97 (5%)
Query 64 TEHQGRI----KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
TE + R + ++ H+ IE+RRR +N I EL +L+P N + +K T+L+ +V
Sbjct 299 TESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASV 358
Query 120 QHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAAD 156
+++ L+ + + L +HL+LR +
Sbjct 359 DYIRKLQREQQRAKDLENRQKKLEHAN-RHLLLRVQE 394
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis
thaliana OX=3702 GN=SPT PE=1 SV=1
Length=373
Score = 40.4 bits (93), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/54 (39%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
A E H+ EKRRR ++N + L SL+P N K DK ++L A++++K L+
Sbjct 198 AAEVHNLSEKRRRSRINEKMKALQSLIPNSN----KTDKASMLDEAIEYLKQLQ 247
>sp|G5EEH5|MXL1_CAEEL Max-like protein 1 OS=Caenorhabditis elegans
OX=6239 GN=mxl-1 PE=1 SV=1
Length=124
Score = 38.1 bits (87), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/83 (28%), Positives = 42/83 (51%), Gaps = 5/83 (6%)
Query 54 KDDPHGRLEYTEHQGRI---KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLD 110
+DD G EH G ++ARE H+ +E+RRRD + L +VP N +
Sbjct 8 EDDQTGHCGSGEHSGPFDPKRHAREQHNALERRRRDNIKDMYTSLREVVPDANGERVQAS 67
Query 111 KLTVLRMAVQHMKTLRGATNPYT 133
+ +L+ A++ ++ +G ++ T
Sbjct 68 RAVILKKAIESIE--KGQSDSAT 88
>sp|O35779|BHE41_RAT Class E basic helix-loop-helix protein 41
OS=Rattus norvegicus OX=10116 GN=Bhlhb3 PE=2 SV=2
Length=410
Score = 40.4 bits (93), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/56 (36%), Positives = 32/56 (57%), Gaps = 2/56 (4%)
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSR--KLDKLTVLRMAVQHMKTLRGATN 130
H IEK+RRD++N I +L L+P ++ L+K VL + ++H+K L T
Sbjct 49 HRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTALTE 104
>sp|Q99PV5|BHE41_MOUSE Class E basic helix-loop-helix protein
41 OS=Mus musculus OX=10090 GN=Bhlhe41 PE=1 SV=1
Length=410
Score = 40.4 bits (93), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/56 (36%), Positives = 32/56 (57%), Gaps = 2/56 (4%)
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSR--KLDKLTVLRMAVQHMKTLRGATN 130
H IEK+RRD++N I +L L+P ++ L+K VL + ++H+K L T
Sbjct 49 HRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTALTE 104
>sp|Q9C0J9|BHE41_HUMAN Class E basic helix-loop-helix protein
41 OS=Homo sapiens OX=9606 GN=BHLHE41 PE=1 SV=1
Length=482
Score = 40.0 bits (92), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/56 (36%), Positives = 32/56 (57%), Gaps = 2/56 (4%)
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSR--KLDKLTVLRMAVQHMKTLRGATN 130
H IEK+RRD++N I +L L+P ++ L+K VL + ++H+K L T
Sbjct 49 HRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTALTE 104
>sp|O14503|BHE40_HUMAN Class E basic helix-loop-helix protein
40 OS=Homo sapiens OX=9606 GN=BHLHE40 PE=1 SV=1
Length=412
Score = 39.7 bits (91), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 31/175 (18%)
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSR--KLDKLTVLRMAVQHMKTLRGATNPYTE 134
H IEK+RRD++N I +L L+P ++ L+K VL + ++H+K L
Sbjct 57 HRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKAL--------- 107
Query 135 ANYKPTFLSDDELKHLILRAAD---GFLFVVGCDRGKILFVS------ESVFKILNYSQN 185
T L D + + +I + G L + G+ +F S V + L +N
Sbjct 108 -----TNLIDQQQQKIIALQSGLQAGELSGRNVETGQEMFCSGFQTCAREVLQYLAKHEN 162
Query 186 --DLIGQSLFDYLHPKDIAKVKEQLSS---SDTAPRERLIDAKTGLPVKTDITPG 235
DL L +LH + ++++ + +S SD AP+ K P K PG
Sbjct 163 TRDLKSSQLVTHLH-RVVSELLQGGTSRKPSDPAPKVMDFKEKPSSPAKGSEGPG 216
>sp|Q60416|SRBP1_CRIGR Sterol regulatory element-binding protein
1 OS=Cricetulus griseus OX=10029 GN=SREBF1 PE=2 SV=1
Length=1133
Score = 40.0 bits (92), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 6/90 (7%)
Query 50 MDTDKDDPHGRLEYTEHQGRIKN---AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMS 106
+DTDK H ++ G ++ R AH+ IEKR R +N I EL LV A
Sbjct 292 VDTDKLPIHRLAAGSKALGSAQSRGEKRTAHNAIEKRYRSSINDKIVELKDLVVGTEA-- 349
Query 107 RKLDKLTVLRMAVQHMKTLRGATNPYTEAN 136
KL+K VLR A+ +++ L+ + + N
Sbjct 350 -KLNKSAVLRKAIDYIRFLQHSNQKLKQEN 378
>sp|Q9WTN3|SRBP1_MOUSE Sterol regulatory element-binding protein
1 OS=Mus musculus OX=10090 GN=Srebf1 PE=1 SV=4
Length=1134
Score = 40.0 bits (92), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 6/90 (7%)
Query 50 MDTDKDDPHGRLEYTEHQGRIKN---AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMS 106
+DTDK H ++ G ++ R AH+ IEKR R +N I EL LV A
Sbjct 292 VDTDKLPIHRLAAGSKALGSAQSRGEKRTAHNAIEKRYRSSINDKIVELKDLVVGTEA-- 349
Query 107 RKLDKLTVLRMAVQHMKTLRGATNPYTEAN 136
KL+K VLR A+ +++ L+ + + N
Sbjct 350 -KLNKSAVLRKAIDYIRFLQHSNQKLKQEN 378
>sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis
thaliana OX=3702 GN=BHLH77 PE=1 SV=1
Length=371
Score = 39.7 bits (91), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (47%), Gaps = 13/109 (12%)
Query 41 GSSTDYQESMDT---DKDD---PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDE 94
GSS + E D+ +KDD P +Y + R A ++HS E+ RR+K++ +
Sbjct 160 GSSKNGVEKCDSKGDNKDDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTL 219
Query 95 LASLVPTCNAMSRK-------LDKLTVLRMAVQHMKTLRGATNPYTEAN 136
L LVP CN ++ K ++ + L+ V+ + NP E N
Sbjct 220 LQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFN 268
>sp|Q05B92|TFE3_BOVIN Transcription factor E3 OS=Bos taurus OX=9913
GN=TFE3 PE=2 SV=1
Length=573
Score = 39.7 bits (91), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query 57 PHGRLEYTEHQGRI----KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 112
P+ + E +E + + + ++ H+ IE+RRR +N I EL +L+P + + +K
Sbjct 325 PNIKREISETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNKG 384
Query 113 TVLRMAVQHMKTLR 126
T+L+ +V +++ L+
Sbjct 385 TILKASVDYIRKLQ 398
>sp|P13097|ESM7_DROME Enhancer of split m7 protein OS=Drosophila
melanogaster OX=7227 GN=E(spl)m7-HLH PE=1 SV=1
Length=186
Score = 38.1 bits (87), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 3/64 (5%)
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMS--RKLDKLTVLRMAVQHMKTLRGATNPYTEANY 137
+E++RR ++N +DEL L+ C A + K +K +L + VQH++ L+ + + AN
Sbjct 21 LERKRRARINKCLDELKDLMAECVAQTGDAKFEKADILEVTVQHLRKLK-ESKKHVPANP 79
Query 138 KPTF 141
+ +F
Sbjct 80 EQSF 83
>sp|Q28DB3|MAD3_XENTR Max dimerization protein 3 OS=Xenopus tropicalis
OX=8364 GN=mxd3 PE=2 SV=1
Length=200
Score = 38.5 bits (88), Expect = 0.10, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query 37 RKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELA 96
R+ + + Y + D P GR + N R H+++EK RR ++ +++L
Sbjct 20 RREREAEHGYASILPCDPATP-GRRKRQRTNSNPDNVRSVHNELEKHRRAQLRRCLEQLK 78
Query 97 SLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
VP SR L++L A QH+K L
Sbjct 79 QQVPLSMENSRH-TTLSLLHRAKQHIKKL 106
>sp|P19532|TFE3_HUMAN Transcription factor E3 OS=Homo sapiens
OX=9606 GN=TFE3 PE=1 SV=4
Length=575
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query 57 PHGRLEYTEHQGRI----KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 112
P+ + E +E + + + ++ H+ IE+RRR +N I EL +L+P + + +K
Sbjct 327 PNIKREISETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNKG 386
Query 113 TVLRMAVQHMKTLR 126
T+L+ +V +++ L+
Sbjct 387 TILKASVDYIRKLQ 400
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis
thaliana OX=3702 GN=UNE10 PE=1 SV=1
Length=399
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (34%), Positives = 38/68 (56%), Gaps = 6/68 (9%)
Query 71 KNAREA--HSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
K +R A H+Q E++RRDK+N + L LVP S K DK ++L ++++K L+
Sbjct 210 KRSRAAAIHNQSERKRRDKINQRMKTLQKLVPN----SSKTDKASMLDEVIEYLKQLQAQ 265
Query 129 TNPYTEAN 136
+ + N
Sbjct 266 VSMMSRMN 273
>sp|Q0VH33|MAD3_XENLA Max dimerization protein 3 OS=Xenopus laevis
OX=8355 GN=mxd3 PE=2 SV=1
Length=200
Score = 38.1 bits (87), Expect = 0.13, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query 37 RKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELA 96
R+ + + Y + D P GR + N R H+++EK RR ++ +++L
Sbjct 20 RREREAEHGYASILPCDPATP-GRRKRQRTNSNPDNVRSVHNELEKHRRAQLRRCLEQLK 78
Query 97 SLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
VP SR L++L A QH+K L
Sbjct 79 QQVPLSMENSRH-TTLSLLHRAKQHIKKL 106
>sp|P56720|SRBP1_RAT Sterol regulatory element-binding protein
1 OS=Rattus norvegicus OX=10116 GN=Srebf1 PE=1 SV=3
Length=1134
Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (54%), Gaps = 3/63 (5%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
R AH+ IEKR R +N I EL LV A KL+K VLR A+ +++ L+ +
Sbjct 319 RTAHNAIEKRYRSSINDKIVELKDLVVGTEA---KLNKSAVLRKAIDYIRFLQHSNQKLK 375
Query 134 EAN 136
+ N
Sbjct 376 QEN 378
>sp|O97676|SRBP1_PIG Sterol regulatory element-binding protein
1 OS=Sus scrofa OX=9823 GN=SREBF1 PE=2 SV=2
Length=1151
Score = 38.9 bits (89), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (54%), Gaps = 3/63 (5%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
R AH+ IEKR R +N I EL LV A KL+K VLR A+ +++ L+ +
Sbjct 326 RTAHNAIEKRYRSSINDKIIELKDLVVGTEA---KLNKSAVLRKAIDYIRFLQQSNQKLK 382
Query 134 EAN 136
+ N
Sbjct 383 QEN 385
>sp|O35185|BHE40_MOUSE Class E basic helix-loop-helix protein
40 OS=Mus musculus OX=10090 GN=Bhlhe40 PE=1 SV=1
Length=411
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (61%), Gaps = 2/51 (4%)
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSR--KLDKLTVLRMAVQHMKTL 125
H IEK+RRD++N I +L L+P ++ L+K VL + ++H+K L
Sbjct 57 HRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKAL 107
>sp|P36956|SRBP1_HUMAN Sterol regulatory element-binding protein
1 OS=Homo sapiens OX=9606 GN=SREBF1 PE=1 SV=2
Length=1147
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (54%), Gaps = 3/63 (5%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
R AH+ IEKR R +N I EL LV A KL+K VLR A+ +++ L+ +
Sbjct 325 RTAHNAIEKRYRSSINDKIIELKDLVVGTEA---KLNKSAVLRKAIDYIRFLQHSNQKLK 381
Query 134 EAN 136
+ N
Sbjct 382 QEN 384
>sp|O35780|BHE40_RAT Class E basic helix-loop-helix protein 40
OS=Rattus norvegicus OX=10116 GN=Bhlhe40 PE=1 SV=1
Length=411
Score = 38.5 bits (88), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (61%), Gaps = 2/51 (4%)
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSR--KLDKLTVLRMAVQHMKTL 125
H IEK+RRD++N I +L L+P ++ L+K VL + ++H+K L
Sbjct 57 HRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKAL 107
>sp|B3F209|BHE40_SHEEP Class E basic helix-loop-helix protein
40 OS=Ovis aries OX=9940 GN=BHLHE40 PE=2 SV=1
Length=412
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (61%), Gaps = 2/51 (4%)
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSR--KLDKLTVLRMAVQHMKTL 125
H IEK+RRD++N I +L L+P ++ L+K VL + ++H+K L
Sbjct 57 HRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKAL 107
>sp|Q5EA15|BHE40_BOVIN Class E basic helix-loop-helix protein
40 OS=Bos taurus OX=9913 GN=BHLHE40 PE=2 SV=1
Length=412
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (61%), Gaps = 2/51 (4%)
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSR--KLDKLTVLRMAVQHMKTL 125
H IEK+RRD++N I +L L+P ++ L+K VL + ++H+K L
Sbjct 57 HRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKAL 107
>sp|Q01069|ESMB_DROME Enhancer of split mbeta protein OS=Drosophila
melanogaster OX=7227 GN=E(spl)mbeta-HLH PE=1 SV=2
Length=195
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/52 (33%), Positives = 30/52 (58%), Gaps = 4/52 (8%)
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMS----RKLDKLTVLRMAVQHMKTLRG 127
+E++RR ++N +DEL ++ C +L+K +L + V+HMK LR
Sbjct 21 LERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEHMKKLRA 72
>sp|Q570R7|PIF7_ARATH Transcription factor PIF7 OS=Arabidopsis
thaliana OX=3702 GN=BHLH72 PE=1 SV=2
Length=366
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/80 (34%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query 48 ESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSR 107
E+ DT+ D+ R E GR A H++ E+RRRD++N + L L+PT +
Sbjct 142 ETQDTEGDEQETRGEAGRSNGRRGRAAAIHNESERRRRDRINQRMRTLQKLLPTAS---- 197
Query 108 KLDKLTVLRMAVQHMKTLRG 127
K DK+++L ++H+K L+
Sbjct 198 KADKVSILDDVIEHLKQLQA 217
>sp|Q8VZ02|BH048_ARATH Transcription factor bHLH48 OS=Arabidopsis
thaliana OX=3702 GN=BHLH48 PE=2 SV=1
Length=327
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/93 (25%), Positives = 42/93 (45%), Gaps = 7/93 (8%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCN-------AMSRKLDKL 112
+L Y + R A + HS E+ RR+K+N+ + L LVP C+ + ++ +
Sbjct 179 KLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHV 238
Query 113 TVLRMAVQHMKTLRGATNPYTEANYKPTFLSDD 145
L+ V+ + A NP + N S++
Sbjct 239 QTLQRQVEMLSMRLAAVNPRIDFNLDSILASEN 271
>sp|A0A3Q7H216|MTB3_SOLLC Transcription factor MTB3 OS=Solanum
lycopersicum OX=4081 GN=MTB3 PE=2 SV=1
Length=517
Score = 38.1 bits (87), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/112 (28%), Positives = 54/112 (48%), Gaps = 20/112 (18%)
Query 24 LSSSLGTSGVDCN-----RKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREA-- 76
+ ++LG+S V N R +G Y+E +D K GR + N RE
Sbjct 279 VQAALGSSQVYGNSSNGYRSDEGEGKLYKEELDERKPRKRGR--------KPANGREEAL 330
Query 77 -HSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
H + E++RR+K+N L ++VP + K+DK ++L A+ ++ L+
Sbjct 331 NHVEAERQRREKLNQRFYALRAVVPNIS----KMDKASLLGDAIAYITDLQA 378
>sp|Q9FE22|HFR1_ARATH Transcription factor HFR1 OS=Arabidopsis
thaliana OX=3702 GN=HFR1 PE=1 SV=1
Length=292
Score = 37.7 bits (86), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/63 (35%), Positives = 36/63 (57%), Gaps = 5/63 (8%)
Query 81 EKRRRD-KMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKP 139
++RRRD KM++ + +L LVP C+ K DK++VL +++MK L+ + P
Sbjct 142 KRRRRDEKMSNKMRKLQQLVPNCH----KTDKVSVLDKTIEYMKNLQLQLQMMSTVGVNP 197
Query 140 TFL 142
FL
Sbjct 198 YFL 200
>sp|Q68DE3|USF3_HUMAN Basic helix-loop-helix domain-containing
protein USF3 OS=Homo sapiens OX=9606 GN=USF3 PE=1 SV=4
Length=2245
Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (59%), Gaps = 3/63 (5%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMK 123
T+ Q R KN RE H+ +E+ R+ K+N+ I+ + L+P A+ K K +L A +++
Sbjct 11 TKKQHRKKN-RETHNAVERHRKKKINAGINRIGELIPCSPAL--KQSKNMILDQAFKYIT 67
Query 124 TLR 126
L+
Sbjct 68 ELK 70
>sp|Q7SX95|MAD3_DANRE Max dimerization protein 3 OS=Danio rerio
OX=7955 GN=mxd3 PE=2 SV=1
Length=200
Score = 37.0 bits (84), Expect = 0.27, Method: Composition-based stats.
Identities = 19/55 (35%), Positives = 32/55 (58%), Gaps = 1/55 (2%)
Query 72 NAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
N+R H+++EK RR ++ +++L VP + SR L +LR A H+K L+
Sbjct 57 NSRSVHNELEKHRRAQLRHCLEQLKQQVPLSSDSSRN-TTLNLLRQAQLHIKKLQ 110
>sp|Q26263|DPN_DROME Protein deadpan OS=Drosophila melanogaster
OX=7227 GN=dpn PE=1 SV=2
Length=435
Score = 37.4 bits (85), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/53 (36%), Positives = 34/53 (64%), Gaps = 8/53 (15%)
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMSR------KLDKLTVLRMAVQHMKTLR 126
+EKRRR ++N ++EL SL+ AM + KL+K +L M V+H+++++
Sbjct 48 MEKRRRARINHCLNELKSLI--LEAMKKDPARHTKLEKADILEMTVKHLQSVQ 98
>sp|A0A286LEZ9|PSIR_PSICY Psilocybin cluster transcription regulator
OS=Psilocybe cyanescens OX=93625 GN=psiR PE=2 SV=1
Length=370
Score = 37.4 bits (85), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/53 (34%), Positives = 32/53 (60%), Gaps = 3/53 (6%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
++ H ++E+RRR +N I+EL +VP+ S + K +L AVQ++ L+
Sbjct 210 KDNHKEVERRRRGNINEGINELGRIVPSG---SGEKAKGAILSRAVQYIHHLK 259
>sp|Q9LS08|BH032_ARATH Transcription factor AIG1 OS=Arabidopsis
thaliana OX=3702 GN=BHLH32 PE=1 SV=1
Length=344
Score = 37.4 bits (85), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/91 (33%), Positives = 53/91 (58%), Gaps = 12/91 (13%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
A ++HS+ E+RRR+++N+ + +L S++P + K DK ++L +QHMK L+ T+
Sbjct 132 ASKSHSEAERRRRERINTHLAKLRSILPN----TTKTDKASLLAEVIQHMKELKRQTSQI 187
Query 133 TEANYKPTFLSD--------DELKHLILRAA 155
T+ PT D DE +L++RA+
Sbjct 188 TDTYQVPTECDDLTVDSSYNDEEGNLVIRAS 218
>sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis
thaliana OX=3702 GN=BHLH96 PE=1 SV=1
Length=320
Score = 37.4 bits (85), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMK 123
++++ I+N R H +E+ RR +MN ++ L SL+P A ++ D+ +++ A+ ++K
Sbjct 114 SKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYA--QRGDQASIVGGAINYLK 171
Query 124 TL 125
L
Sbjct 172 EL 173
>sp|Q8IV76|PASD1_HUMAN Circadian clock protein PASD1 OS=Homo sapiens
OX=9606 GN=PASD1 PE=1 SV=1
Length=773
Score = 37.4 bits (85), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (53%), Gaps = 4/74 (5%)
Query 126 RGATNPYT---EANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNY 182
R NP + + N+ P+F + D + L+ DGF+ + D G I+ V+E++ +L +
Sbjct 9 RDKVNPKSSQRKLNWIPSFPTYDYFNQVTLQLLDGFMITLSTD-GVIICVAENISSLLGH 67
Query 183 SQNDLIGQSLFDYL 196
+++G+ L L
Sbjct 68 LPAEIVGKKLLSLL 81
>sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thaliana
OX=3702 GN=BPE PE=2 SV=1
Length=343
Score = 37.0 bits (84), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 56/110 (51%), Gaps = 10/110 (9%)
Query 24 LSSSLGTSGVDCNRKRKGSSTDYQ---ESMDTDKDDPHGRLE----YTEHQGRIKNAREA 76
+ S++G S + R++ D + ES+ T+ + ++E Y + R A ++
Sbjct 87 IVSTIGASEGENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDS 146
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
HS E+ RR+K++ + L LVP CN + + K VL + ++++L+
Sbjct 147 HSLAERARREKISERMKILQDLVPGCNKV---IGKALVLDEIINYIQSLQ 193
>sp|Q14582|MAD4_HUMAN Max dimerization protein 4 OS=Homo sapiens
OX=9606 GN=MXD4 PE=1 SV=2
Length=209
Score = 36.2 bits (82), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 1/54 (2%)
Query 72 NAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
N R +H+++EK RR K+ ++++L LVP +R L++L+ A H+K L
Sbjct 53 NNRSSHNELEKHRRAKLRLYLEQLKQLVPLGPDSTRHT-TLSLLKRAKVHIKKL 105
>sp|Q9HCC6|HES4_HUMAN Transcription factor HES-4 OS=Homo sapiens
OX=9606 GN=HES4 PE=1 SV=1
Length=221
Score = 36.2 bits (82), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 24/99 (24%)
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMSR------KLDKLTVLRMAVQHMKTLRG------ 127
+EKRRR ++N + +L +L+ +A+ + KL+K +L M V+H+++LR
Sbjct 42 MEKRRRARINESLAQLKTLI--LDALRKESSRHSKLEKADILEMTVRHLRSLRRVQVTAA 99
Query 128 -ATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCD 165
+ +P Y+ F H L A+ F+ GC+
Sbjct 100 LSADPAVLGKYRAGF-------HECL--AEVNRFLAGCE 129
>sp|Q9S7Y1|BH030_ARATH Transcription factor bHLH30 OS=Arabidopsis
thaliana OX=3702 GN=BHLH30 PE=1 SV=1
Length=368
Score = 37.0 bits (84), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (63%), Gaps = 6/75 (8%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
A ++HS+ E+RRR+++N+ + +L S++P + K DK ++L +QH+K L+ T+
Sbjct 174 ASKSHSEAERRRRERINNHLAKLRSILPN----TTKTDKASLLAEVIQHVKELKRETSVI 229
Query 133 TEANYKPTFLSDDEL 147
+E N PT DEL
Sbjct 230 SETNLVPT--ESDEL 242
>sp|Q9ZPW3|HBI1_ARATH Transcription factor HBI1 OS=Arabidopsis
thaliana OX=3702 GN=HBI1 PE=1 SV=3
Length=337
Score = 37.0 bits (84), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/113 (25%), Positives = 52/113 (46%), Gaps = 12/113 (11%)
Query 34 DCNRKRKGSSTDYQESMDTDKDDPHG-----RLEYTEHQGRIKNAREAHSQIEKRRRDKM 88
+ + K K + + + S DT K+ G +L+Y + R A + HS E+ RR+K+
Sbjct 148 ESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAERARREKI 207
Query 89 NSFIDELASLVPTCNAMSRK-------LDKLTVLRMAVQHMKTLRGATNPYTE 134
+ + L +VP CN ++ K ++ + L+ V+ + NP E
Sbjct 208 SKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELE 260
>sp|P0DPB0|PSIR_PSICU Psilocybin cluster transcription regulator
OS=Psilocybe cubensis OX=181762 GN=psiR PE=3 SV=1
Length=358
Score = 36.6 bits (83), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/53 (34%), Positives = 32/53 (60%), Gaps = 3/53 (6%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
++ H ++E+RRR +N I+EL +VP+ S + K +L AVQ++ L+
Sbjct 201 KDNHKEVERRRRGNINEGINELGRIVPSG---SGEKAKGAILSRAVQYIHHLK 250
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana
OX=3702 GN=ALC PE=2 SV=1
Length=210
Score = 35.8 bits (81), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
H+ EK+RR K+N + L L+P N K DK ++L A++++K L+
Sbjct 98 HNLSEKKRRSKINEKMKALQKLIPNSN----KTDKASMLDEAIEYLKQLQ 143
>sp|Q9LET0|BH107_ARATH Putative transcription factor bHLH107 OS=Arabidopsis
thaliana OX=3702 GN=BHLH107 PE=3 SV=1
Length=230
Score = 36.2 bits (82), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 4/58 (7%)
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTE 134
H + E++RR ++NS +++L L+ +CN+ K DK T+L VQ +K L+ T T+
Sbjct 49 HKEAERKRRARINSHLNKLRKLL-SCNS---KTDKSTLLAKVVQRVKELKQQTLEITD 102
>sp|Q04666|HES1_RAT Transcription factor HES-1 OS=Rattus norvegicus
OX=10116 GN=Hes1 PE=1 SV=1
Length=281
Score = 36.2 bits (82), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 24/106 (23%)
Query 49 SMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSR- 107
S++T D P E+ + I +EKRRR ++N + +L +L+ +A+ +
Sbjct 20 SVNTTPDKPKTASEHRKSSKPI---------MEKRRRARINESLSQLKTLI--LDALKKD 68
Query 108 -----KLDKLTVLRMAVQHMKTLRGA-------TNPYTEANYKPTF 141
KL+K +L M V+H++ L+ A T+P Y+ F
Sbjct 69 SSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGF 114
>sp|Q9SK91|BH094_ARATH Transcription factor bHLH94 OS=Arabidopsis
thaliana OX=3702 GN=BHLH94 PE=1 SV=2
Length=304
Score = 36.2 bits (82), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 35/56 (63%), Gaps = 2/56 (4%)
Query 70 IKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
I+N R H +E+ RR +MN ++ L SL+P+ A ++ D+ +++ A+ ++K L
Sbjct 110 IENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYA--QRGDQASIVGGAINYVKEL 163
>sp|Q14469|HES1_HUMAN Transcription factor HES-1 OS=Homo sapiens
OX=9606 GN=HES1 PE=1 SV=1
Length=280
Score = 36.2 bits (82), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 24/106 (23%)
Query 49 SMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSR- 107
S++T D P E+ + I +EKRRR ++N + +L +L+ +A+ +
Sbjct 20 SVNTTPDKPKTASEHRKSSKPI---------MEKRRRARINESLSQLKTLI--LDALKKD 68
Query 108 -----KLDKLTVLRMAVQHMKTLRGA-------TNPYTEANYKPTF 141
KL+K +L M V+H++ L+ A T+P Y+ F
Sbjct 69 SSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGF 114
>sp|Q3ZBG4|HES1_BOVIN Transcription factor HES-1 OS=Bos taurus
OX=9913 GN=HES1 PE=2 SV=1
Length=280
Score = 36.2 bits (82), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 24/106 (23%)
Query 49 SMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSR- 107
S++T D P E+ + I +EKRRR ++N + +L +L+ +A+ +
Sbjct 20 SVNTTPDKPKTASEHRKSSKPI---------MEKRRRARINESLSQLKTLI--LDALKKD 68
Query 108 -----KLDKLTVLRMAVQHMKTLRGA-------TNPYTEANYKPTF 141
KL+K +L M V+H++ L+ A T+P Y+ F
Sbjct 69 SSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGF 114
>sp|A3BV95|BCL1_ORYSJ Basic helix-loop-helix protein 80 OS=Oryza
sativa subsp. japonica OX=39947 GN=BCL1 PE=1 SV=1
Length=291
Score = 36.2 bits (82), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 50/91 (55%), Gaps = 6/91 (7%)
Query 36 NRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDEL 95
+R+ K +S + +E T+ + P G Y + R A ++HS E+ RR++++ + L
Sbjct 96 SRRGKKASKEVEEKSTTEDEPPKG---YIHVRARRGQATDSHSLAERVRRERISERMRML 152
Query 96 ASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
+LVP C+ ++ K +L + ++++L+
Sbjct 153 QALVPGCDKVT---GKALILDEIINYVQSLQ 180
>sp|A2YXI4|BCL1_ORYSI Basic helix-loop-helix protein 80 OS=Oryza
sativa subsp. indica OX=39946 GN=BCL1 PE=3 SV=1
Length=291
Score = 36.2 bits (82), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 50/91 (55%), Gaps = 6/91 (7%)
Query 36 NRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDEL 95
+R+ K +S + +E T+ + P G Y + R A ++HS E+ RR++++ + L
Sbjct 96 SRRGKKASKEVEEKSTTEDEPPKG---YIHVRARRGQATDSHSLAERVRRERISERMRML 152
Query 96 ASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
+LVP C+ ++ K +L + ++++L+
Sbjct 153 QALVPGCDKVT---GKALILDEIINYVQSLQ 180
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis
thaliana OX=3702 GN=NAI1 PE=2 SV=1
Length=320
Score = 36.2 bits (82), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 4/58 (7%)
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTE 134
H E++RR K+N + L++L+P +K DK TVL A++H+K L+ E
Sbjct 133 HVLAERKRRQKLNERLIALSALLPGL----KKTDKATVLEDAIKHLKQLQERVKKLEE 186
>sp|P49379|CBF1_KLULA Centromere-binding protein 1 OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) OX=284590 GN=CBF1 PE=1 SV=2
Length=359
Score = 36.2 bits (82), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
+E+H ++E+RRR +N+ I++L+ L+P ++ K +L A ++++ ++
Sbjct 251 KESHKEVERRRRQNINTAIEKLSDLLPV-----KETSKAAILSRAAEYIQKMK 298
>sp|Q6Z2G7|BCL2_ORYSJ Basic helix-loop-helix protein 79 OS=Oryza
sativa subsp. japonica OX=39947 GN=BCL2 PE=1 SV=1
Length=361
Score = 36.2 bits (82), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 41/84 (49%), Gaps = 7/84 (8%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK-------LDKL 112
+ +Y + R A ++HS E+ RR++++ + L LVP CN ++ K ++ +
Sbjct 158 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYV 217
Query 113 TVLRMAVQHMKTLRGATNPYTEAN 136
L+ V+ + A+NP N
Sbjct 218 QSLQKQVEFLSMKIAASNPVVNFN 241
>sp|B8AH97|BCL2_ORYSI Basic helix-loop-helix protein 79 OS=Oryza
sativa subsp. indica OX=39946 GN=BCL2 PE=3 SV=1
Length=361
Score = 36.2 bits (82), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 41/84 (49%), Gaps = 7/84 (8%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK-------LDKL 112
+ +Y + R A ++HS E+ RR++++ + L LVP CN ++ K ++ +
Sbjct 158 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYV 217
Query 113 TVLRMAVQHMKTLRGATNPYTEAN 136
L+ V+ + A+NP N
Sbjct 218 QSLQKQVEFLSMKIAASNPVVNFN 241
>sp|Q9FMB6|BIM3_ARATH Transcription factor BIM3 OS=Arabidopsis
thaliana OX=3702 GN=BIM3 PE=1 SV=1
Length=298
Score = 35.8 bits (81), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/63 (29%), Positives = 34/63 (54%), Gaps = 1/63 (2%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
R HS+ E+RRR K+N L ++P N +K DK + L ++++ L+ + Y
Sbjct 35 RSKHSETEQRRRSKINERFQSLMDIIPQ-NQNDQKRDKASFLLEVIEYIHFLQEKVHMYE 93
Query 134 EAN 136
+++
Sbjct 94 DSH 96
>sp|P35428|HES1_MOUSE Transcription factor HES-1 OS=Mus musculus
OX=10090 GN=Hes1 PE=1 SV=1
Length=282
Score = 35.8 bits (81), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 15/75 (20%)
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMSR------KLDKLTVLRMAVQHMKTLRGA----- 128
+EKRRR ++N + +L +L+ +A+ + KL+K +L M V+H++ L+ A
Sbjct 42 MEKRRRARINESLSQLKTLI--LDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAA 99
Query 129 --TNPYTEANYKPTF 141
T+P Y+ F
Sbjct 100 LSTDPSVLGKYRAGF 114
>sp|Q336P5|MYC2_ORYSJ Transcription factor MYC2 OS=Oryza sativa
subsp. japonica OX=39947 GN=MYC2 PE=1 SV=1
Length=699
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/59 (34%), Positives = 34/59 (58%), Gaps = 7/59 (12%)
Query 72 NAREA---HSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
N RE H + E++RR+K+N L ++VP + K+DK ++L A+ ++ LRG
Sbjct 517 NGREEPLNHVEAERQRREKLNQRFYALRAVVPNVS----KMDKASLLGDAISYINELRG 571
>sp|Q9LEZ3|BIM1_ARATH Transcription factor BIM1 OS=Arabidopsis
thaliana OX=3702 GN=BIM1 PE=1 SV=2
Length=529
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/78 (27%), Positives = 39/78 (50%), Gaps = 7/78 (9%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
++ R HS E+RRR K+N L L+P + +K DK + L +++++ L+
Sbjct 273 KLNTPRSKHSATEQRRRSKINDRFQMLRQLIPNSD---QKRDKASFLLEVIEYIQFLQEK 329
Query 129 TNPYTEA----NYKPTFL 142
+ Y + N++P L
Sbjct 330 ADKYVTSYQGWNHEPAKL 347
>sp|Q5TGS1|HES3_HUMAN Transcription factor HES-3 OS=Homo sapiens
OX=9606 GN=HES3 PE=3 SV=1
Length=186
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Query 80 IEKRRRDKMNSFIDELASLVP---TCNAMSRKLDKLTVLRMAVQHMKTLR 126
+EK+RR ++N +++L SL+ + RKL+K +L ++V++M++L+
Sbjct 1 MEKKRRARINVSLEQLKSLLEKHYSHQIRKRKLEKADILELSVKYMRSLQ 50
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis
thaliana OX=3702 GN=GL3 PE=1 SV=1
Length=637
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/49 (31%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
H+ +EK+RR+K+N L ++P+ N K+DK+++L +++++ L
Sbjct 442 HAVLEKKRREKLNERFMTLRKIIPSIN----KIDKVSILDDTIEYLQEL 486
>sp|Q69WS3|BH094_ORYSJ Transcription factor BHLH094 OS=Oryza sativa
subsp. japonica OX=39947 GN=BHLH094 PE=1 SV=2
Length=256
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (57%), Gaps = 3/67 (4%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
+ +Y + R A ++HS E+ RR+K++ + L LVP CN + + K +VL +
Sbjct 122 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV---IGKASVLDEII 178
Query 120 QHMKTLR 126
++++L+
Sbjct 179 NYIQSLQ 185
>sp|Q61657|HES3_MOUSE Transcription factor HES-3 OS=Mus musculus
OX=10090 GN=Hes3 PE=2 SV=2
Length=175
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/52 (31%), Positives = 35/52 (67%), Gaps = 3/52 (6%)
Query 80 IEKRRRDKMNSFIDELASLVP---TCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
+EK+RR ++N +++L SL+ + RKL+K +L ++V++M++L+ +
Sbjct 1 MEKKRRARINVSLEQLRSLLERHYSHQIRKRKLEKADILELSVKYMRSLQNS 52
>sp|E3SXU4|BHLHW_PEA Basic helix-loop-helix protein A OS=Pisum
sativum OX=3888 GN=BHLH PE=3 SV=1
Length=652
Score = 35.8 bits (81), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query 42 SSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREA-HSQIEKRRRDKMNSFIDELASLVP 100
+S +++ + +DP RL +G ++ A H E+RRR+K+N L SLVP
Sbjct 436 TSPQTRDTAGVNSNDPSARLR---GKGTPQDELSANHVLAERRRREKLNERFIILRSLVP 492
Query 101 TCNAMSRKLDKLTVLRMAVQHMKTLR 126
K+DK ++L ++++K LR
Sbjct 493 FVT----KMDKASILGDTIEYLKQLR 514
>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis
thaliana OX=3702 GN=BHLH49 PE=1 SV=1
Length=486
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 11/100 (11%)
Query 63 YTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK-------LDKLTVL 115
Y + R A +HS E+ RR+K++ + L LVP CN ++ K ++ + L
Sbjct 300 YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSL 359
Query 116 RMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAA 155
+ V+ + NP + N + L+ D L+ LRA
Sbjct 360 QRQVEFLSMKLATVNPQMDFNLE-GLLAKDALQ---LRAG 395
>sp|Q3EAI1|BH060_ARATH Transcription factor bHLH60 OS=Arabidopsis
thaliana OX=3702 GN=BHLH60 PE=1 SV=1
Length=426
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/97 (27%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query 18 PGPTD----LLSSSLGTSGVDC--NRKRKGSSTDYQESMDTDKD-----DPHGRLEYTEH 66
P TD L+S S + + C R G D+++ + + + +L Y
Sbjct 145 PAETDSSQRLISDSAIENQIPCPNQNNRNGKRKDFEKKGKSSTKKNKSSEENEKLPYVHV 204
Query 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCN 103
+ R A ++HS E+ RR+K+N+ + L LVP C+
Sbjct 205 RARRGQATDSHSLAERARREKINARMKLLQELVPGCD 241
>sp|Q5TA89|HES5_HUMAN Transcription factor HES-5 OS=Homo sapiens
OX=9606 GN=HES5 PE=2 SV=1
Length=166
Score = 34.3 bits (77), Expect = 1.9, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (64%), Gaps = 3/47 (6%)
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMSR---KLDKLTVLRMAVQHMK 123
+EK RRD++NS I++L L+ A + KL+K +L MAV ++K
Sbjct 24 VEKMRRDRINSSIEQLKLLLEQEFARHQPNSKLEKADILEMAVSYLK 70
>sp|P17106|CBF1_YEAST Centromere-binding protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CBF1
PE=1 SV=2
Length=351
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/56 (29%), Positives = 35/56 (63%), Gaps = 5/56 (9%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
K +++H ++E+RRR+ +N+ I+ L+ L+P R+ K +L A ++++ L+
Sbjct 221 KQRKDSHKEVERRRRENINTAINVLSDLLPV-----RESSKAAILACAAEYIQKLK 271
>sp|Q12398|HMS1_YEAST Probable transcription factor HMS1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) OX=559292
GN=HMS1 PE=1 SV=1
Length=434
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/61 (30%), Positives = 31/61 (51%), Gaps = 0/61 (0%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
R++ R +H+ IEK+ R +N I++L VPT +K + L + + + L A
Sbjct 263 RVRTGRVSHNIIEKKYRSNINDKIEQLRRTVPTLRVAYKKCNDLPITSRDLADLDGLEPA 322
Query 129 T 129
T
Sbjct 323 T 323
>sp|Q9W6C8|NDF2_DANRE Neurogenic differentiation factor 2 OS=Danio
rerio OX=7955 GN=neurod2 PE=2 SV=1
Length=363
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/67 (33%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query 59 GRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMA 118
RLE ++ + + NARE + R +NS +D L +VP C + ++KL K+ LR+A
Sbjct 100 ARLERSKVRRQKANARE------RTRMHDLNSALDNLLKVVP-CYSKTQKLSKIETLRLA 152
Query 119 VQHMKTL 125
++ L
Sbjct 153 KNYIWAL 159
>sp|Q6PBD4|HES4_XENTR Transcription factor HES-4 OS=Xenopus tropicalis
OX=8364 GN=hes4 PE=2 SV=1
Length=281
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 8/53 (15%)
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMSR------KLDKLTVLRMAVQHMKTLR 126
+EKRRR ++N + +L +L+ +A+ + KL+K +L M V+H++ L+
Sbjct 42 MEKRRRARINESLGQLKTLI--LDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92
>sp|P70120|HES5_MOUSE Transcription factor HES-5 OS=Mus musculus
OX=10090 GN=Hes5 PE=1 SV=1
Length=167
Score = 33.9 bits (76), Expect = 2.1, Method: Composition-based stats.
Identities = 22/58 (38%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMSR---KLDKLTVLRMAV---QHMKTLRGATNP 131
+EK RRD++NS I++L L+ A + KL+K +L MAV +H K A P
Sbjct 24 VEKMRRDRINSSIEQLKLLLEQEFARHQPNSKLEKADILEMAVSYLKHSKAFAAAAGP 81
>sp|Q28555|HAND1_SHEEP Heart- and neural crest derivatives-expressed
protein 1 OS=Ovis aries OX=9940 GN=HAND1 PE=2 SV=1
Length=204
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/67 (33%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query 59 GRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMA 118
GRLE GR+ + + + E+RR + +NS EL +P A + KL K+ LR+A
Sbjct 89 GRLEAL--GGRLGRRKGSGPKKERRRTESINSAFAELRECIPNVPADT-KLSKIKTLRLA 145
Query 119 VQHMKTL 125
++ L
Sbjct 146 TSYIAYL 152
>sp|Q84T08|BH089_ORYSJ Transcription factor BHLH089 OS=Oryza sativa
subsp. japonica OX=39947 GN=BHLH089 PE=1 SV=1
Length=265
Score = 34.7 bits (78), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
+ +Y + R A ++HS E+ RR+K++ + L LVP CN + + K +VL +
Sbjct 130 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV---IGKASVLDEII 186
Query 120 QHMKTLR 126
+++ L+
Sbjct 187 NYIQALQ 193
>sp|Q10574|LIN32_CAEEL Protein lin-32 OS=Caenorhabditis elegans
OX=6239 GN=lin-32 PE=1 SV=2
Length=142
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 34/56 (61%), Gaps = 1/56 (2%)
Query 70 IKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
++ R A ++ E+RR + +N DEL ++P ++ +KL K L+MA ++++ L
Sbjct 70 LRMRRSAANERERRRMNTLNVAYDELREVLPEIDS-GKKLSKFETLQMAQKYIECL 124
>sp|Q90VV1|HES4B_XENLA Transcription factor HES-4-B OS=Xenopus
laevis OX=8355 GN=hes4-b PE=1 SV=1
Length=277
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 8/53 (15%)
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMSR------KLDKLTVLRMAVQHMKTLR 126
+EKRRR ++N + +L +L+ +A+ + KL+K +L M V+H++ L+
Sbjct 42 MEKRRRARINESLGQLKTLI--LDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92
>sp|Q90Z12|HES4A_XENLA Transcription factor HES-4-A OS=Xenopus
laevis OX=8355 GN=hes4-a PE=1 SV=2
Length=281
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 8/53 (15%)
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMSR------KLDKLTVLRMAVQHMKTLR 126
+EKRRR ++N + +L +L+ +A+ + KL+K +L M V+H++ L+
Sbjct 42 MEKRRRARINESLGQLKTLI--LDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92
>sp|Q9D489|SOLH2_MOUSE Spermatogenesis- and oogenesis-specific
basic helix-loop-helix-containing protein 2 OS=Mus musculus
OX=10090 GN=Sohlh2 PE=1 SV=2
Length=467
Score = 35.0 bits (79), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/61 (33%), Positives = 34/61 (56%), Gaps = 2/61 (3%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
K A HS EK RR+++ S ++L +L+P RK D +V+ V ++K +R + +
Sbjct 199 KQASFLHSTKEKLRRERIKSCCEQLRTLLPYVKG--RKSDVASVIEATVDYVKQVRESLS 256
Query 131 P 131
P
Sbjct 257 P 257
>sp|Q93W88|BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis
thaliana OX=3702 GN=BHLH137 PE=1 SV=1
Length=286
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 13/118 (11%)
Query 14 DFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR-------LEYTEH 66
D +S GP S++ +G RK + S+ + +E ++ K R +Y
Sbjct 83 DQLSHGP-----SAITNTGKTRGRKARNSN-NSKEGVEGRKSKKQKRGSKEEPPTDYIHV 136
Query 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ R A ++HS E+ RR+K++ + L +LVP C+ ++ K L + VQ ++T
Sbjct 137 RARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQT 194
>sp|Q60948|MAD4_MOUSE Max dimerization protein 4 OS=Mus musculus
OX=10090 GN=Mxd4 PE=1 SV=1
Length=209
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (2%)
Query 72 NAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
N R +H+++EK RR K+ ++++L L P +R L++L+ A H+K L
Sbjct 53 NNRSSHNELEKHRRAKLRLYLEQLKQLGPLGPDSTRHT-TLSLLKRAKMHIKKL 105
>sp|Q9Z304|MYCS_MOUSE Protein S-Myc OS=Mus musculus OX=10090 GN=Mycs
PE=2 SV=2
Length=431
Score = 35.0 bits (79), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (2%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
R H+++E++RRD M S L LVP + K K+ +L+ A +++ TL+
Sbjct 350 RRNHNRMERQRRDIMRSSFLNLRDLVPEL-VHNEKAAKVVILKKATEYIHTLQA 402
>sp|Q5ADL8|TRY6_CANAL Transcriptional regulator of yeast form
adherence 6 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
OX=237561 GN=TRY6 PE=2 SV=1
Length=467
Score = 35.0 bits (79), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 0/44 (0%)
Query 59 GRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTC 102
++ E R ++ HS IEKRRR K+N + L L+P C
Sbjct 79 ANIDSEELAKRKNETKQLHSIIEKRRRIKINREFEALKYLIPAC 122
>sp|Q3MHT3|SOLH2_RAT Spermatogenesis- and oogenesis-specific basic
helix-loop-helix-containing protein 2 OS=Rattus norvegicus
OX=10116 GN=Sohlh2 PE=2 SV=1
Length=462
Score = 34.7 bits (78), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/79 (28%), Positives = 38/79 (48%), Gaps = 2/79 (3%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
R K A HS EK RR+++ ++L +L+P RK D +V+ V ++K +R +
Sbjct 197 RNKKASFLHSSKEKLRRERIKFCCEQLRTLLPYVKG--RKSDVASVIEATVDYVKQVRES 254
Query 129 TNPYTEANYKPTFLSDDEL 147
+P A + S+
Sbjct 255 LSPAIMAQITESLQSNKRF 273
>sp|Q6IRB2|HES1A_XENLA Transcription factor HES-1-A OS=Xenopus
laevis OX=8355 GN=hes1-a PE=1 SV=1
Length=267
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 8/53 (15%)
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMSR------KLDKLTVLRMAVQHMKTLR 126
+EKRRR ++N + +L +L+ +A+ + KL+K +L M V+H++ L+
Sbjct 42 MEKRRRARINESLGQLKTLI--LDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92
>sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis
thaliana OX=3702 GN=BHLH62 PE=2 SV=1
Length=456
Score = 34.7 bits (78), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (49%), Gaps = 7/86 (8%)
Query 38 KRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELAS 97
K+ + D +S+D KD H R R A ++HS E+ RR+K++ + L
Sbjct 237 KKSEENGDKTKSIDPYKDYIHVR-------ARRGQATDSHSLAERVRREKISERMKLLQD 289
Query 98 LVPTCNAMSRKLDKLTVLRMAVQHMK 123
LVP CN ++ K L + VQ ++
Sbjct 290 LVPGCNKVTGKALMLDEIINYVQSLQ 315
>sp|Q8AVU4|HES1B_XENLA Transcription factor HES-1-B OS=Xenopus
laevis OX=8355 GN=hes1-b PE=2 SV=1
Length=267
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 8/53 (15%)
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMSR------KLDKLTVLRMAVQHMKTLR 126
+EKRRR ++N + +L +L+ +A+ + KL+K +L M V+H++ L+
Sbjct 42 MEKRRRARINESLGQLKTLI--LDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92
>sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis
thaliana OX=3702 GN=BHLH79 PE=1 SV=1
Length=281
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query 54 KDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT 113
K+ P +Y + R A + HS E+ RR+K++ + L ++P CN + + K
Sbjct 141 KNKPEPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKI---IGKAL 197
Query 114 VLRMAVQHMKTLR 126
VL + ++++L+
Sbjct 198 VLDEIINYIQSLQ 210
>sp|P97832|HAND1_RAT Heart- and neural crest derivatives-expressed
protein 1 OS=Rattus norvegicus OX=10116 GN=Hand1 PE=2 SV=2
Length=216
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/67 (33%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query 59 GRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMA 118
GRLE GR+ + + + E+RR + +NS EL +P A + KL K+ LR+A
Sbjct 83 GRLEAL--GGRLPRRKGSGPKKERRRTESINSAFAELRECIPNVPADT-KLSKIKTLRLA 139
Query 119 VQHMKTL 125
++ L
Sbjct 140 TSYIAYL 146
>sp|Q08DI0|NDF6_BOVIN Neurogenic differentiation factor 6 OS=Bos
taurus OX=9913 GN=NEUROD6 PE=2 SV=1
Length=337
Score = 34.7 bits (78), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/57 (32%), Positives = 32/57 (56%), Gaps = 1/57 (2%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
R+K R+ + E+ R +N +D L +VP C + ++KL K+ LR+A ++ L
Sbjct 91 RVKFRRQEANARERNRMHGLNDALDNLRKVVP-CYSKTQKLSKIETLRLAKNYIWAL 146
>sp|P57100|HAND1_RABIT Heart- and neural crest derivatives-expressed
protein 1 OS=Oryctolagus cuniculus OX=9986 GN=HAND1 PE=2
SV=1
Length=215
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query 51 DTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLD 110
DT GRLE GR+ + + + E+RR + +NS EL +P A + KL
Sbjct 75 DTRPGQSPGRLEAL--GGRLGRRKGSGPKKERRRTESINSAFAELRECIPNVPADT-KLS 131
Query 111 KLTVLRMAVQHMKTL 125
K+ LR+A ++ L
Sbjct 132 KIKTLRLATSYIAYL 146
>sp|O08789|MNT_MOUSE Max-binding protein MNT OS=Mus musculus OX=10090
GN=Mnt PE=2 SV=2
Length=591
Score = 34.7 bits (78), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 2/53 (4%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
RE H+++EK RR + + L +P N +K L+VLR A++++++L+
Sbjct 224 REVHNKLEKNRRAHLKECFETLKRNIP--NVDDKKTSNLSVLRTALRYIQSLK 274
>sp|Q9C670|BH076_ARATH Transcription factor bHLH76 OS=Arabidopsis
thaliana OX=3702 GN=BHLH76 PE=1 SV=1
Length=390
Score = 34.7 bits (78), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/93 (25%), Positives = 45/93 (48%), Gaps = 8/93 (9%)
Query 63 YTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK-------LDKLTVL 115
Y + R A +HS E+ RR+K++ + L LVP C+ ++ K ++ + L
Sbjct 220 YIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSL 279
Query 116 RMAVQHMKTLRGATNPYTEANYKPTFLSDDELK 148
+ ++ + A NP + N + + L+ D L+
Sbjct 280 QCQIEFLSMKLSAVNPVLDFNLE-SLLAKDALQ 311
>sp|Q4R5G6|NDF6_MACFA Neurogenic differentiation factor 6 OS=Macaca
fascicularis OX=9541 GN=NEUROD6 PE=2 SV=1
Length=337
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/57 (32%), Positives = 32/57 (56%), Gaps = 1/57 (2%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
R+K R+ + E+ R +N +D L +VP C + ++KL K+ LR+A ++ L
Sbjct 91 RVKFRRQEANARERNRMHGLNDALDNLRKVVP-CYSKTQKLSKIETLRLAKNYIWAL 146
>sp|Q96NK8|NDF6_HUMAN Neurogenic differentiation factor 6 OS=Homo
sapiens OX=9606 GN=NEUROD6 PE=1 SV=1
Length=337
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/57 (32%), Positives = 32/57 (56%), Gaps = 1/57 (2%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
R+K R+ + E+ R +N +D L +VP C + ++KL K+ LR+A ++ L
Sbjct 91 RVKFRRQEANARERNRMHGLNDALDNLRKVVP-CYSKTQKLSKIETLRLAKNYIWAL 146
>sp|P48986|NDF6_MOUSE Neurogenic differentiation factor 6 OS=Mus
musculus OX=10090 GN=Neurod6 PE=2 SV=1
Length=337
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/57 (32%), Positives = 32/57 (56%), Gaps = 1/57 (2%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
R+K R+ + E+ R +N +D L +VP C + ++KL K+ LR+A ++ L
Sbjct 91 RVKFRRQEANARERNRMHGLNDALDNLRKVVP-CYSKTQKLSKIETLRLAKNYIWAL 146
>sp|Q99583|MNT_HUMAN Max-binding protein MNT OS=Homo sapiens OX=9606
GN=MNT PE=1 SV=1
Length=582
Score = 34.7 bits (78), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 2/53 (4%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
RE H+++EK RR + + L +P N +K L+VLR A++++++L+
Sbjct 222 REVHNKLEKNRRAHLKECFETLKRNIP--NVDDKKTSNLSVLRTALRYIQSLK 272
>sp|A0A2R6QE26|BHL42_ACTCC Transcription factor BHLH42 OS=Actinidia
chinensis var. chinensis OX=1590841 GN=BHLH42 PE=1 SV=1
Length=689
Score = 34.7 bits (78), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
H E+RRR+K+N L SLVP K+DK ++L ++++K LR
Sbjct 488 HVLAERRRREKLNERFIILRSLVPFVT----KMDKASILGDTIEYVKQLR 533
>sp|Q5PPM5|HES1_XENTR Transcription factor HES-1 OS=Xenopus tropicalis
OX=8364 GN=hes1 PE=2 SV=1
Length=267
Score = 34.3 bits (77), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 8/53 (15%)
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMSR------KLDKLTVLRMAVQHMKTLR 126
+EKRRR ++N + +L +L+ +A+ + KL+K +L M V+H++ L+
Sbjct 42 MEKRRRARINESLGQLKTLI--LDALKKDSSRHSKLEKADILEMTVKHLRNLQ 92
>sp|O73615|HAND1_XENLA Heart- and neural crest derivatives-expressed
protein 1 OS=Xenopus laevis OX=8355 GN=hand1 PE=2 SV=1
Length=197
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (2%)
Query 68 GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
G++ + A + E+RR + +NS EL +P A + KL K+ LR+A ++ L
Sbjct 76 GKLGRRKGAPPKKERRRTESINSAFAELRECIPNVPADT-KLSKIKTLRLATSYIGYL 132
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis
thaliana OX=3702 GN=BHLH23 PE=2 SV=1
Length=413
Score = 34.3 bits (77), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/58 (33%), Positives = 33/58 (57%), Gaps = 6/58 (10%)
Query 71 KNAREA--HSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
K +R A H E+RRR K+N + L L+P C K D+ ++L ++++K+L+
Sbjct 274 KRSRAAIMHKLSERRRRQKINEMMKALQELLPRCT----KTDRSSMLDDVIEYVKSLQ 327
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE
OS=Arabidopsis thaliana OX=3702 GN=AIB PE=2 SV=2
Length=566
Score = 34.3 bits (77), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (59%), Gaps = 7/58 (12%)
Query 72 NAREA---HSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
N RE H + E++RR+K+N L S+VP + K+DK ++L A+ ++K L+
Sbjct 388 NGREEPLNHVEAERQRREKLNQRFYALRSVVPNIS----KMDKASLLGDAISYIKELQ 441
>sp|Q6NYU3|NDF6A_DANRE Neurogenic differentiation factor 6-A OS=Danio
rerio OX=7955 GN=neurod6a PE=2 SV=1
Length=327
Score = 34.3 bits (77), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/57 (32%), Positives = 32/57 (56%), Gaps = 1/57 (2%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
R+K R + E+ R +N+ +D L +VP C + ++KL K+ LR+A ++ L
Sbjct 85 RVKVRRMEANARERNRMHGLNNALDSLRKVVP-CYSKTQKLSKIETLRLAKNYIWAL 140
>sp|P10166|MYCL_MOUSE Protein L-Myc OS=Mus musculus OX=10090 GN=Mycl
PE=2 SV=1
Length=368
Score = 34.3 bits (77), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/55 (33%), Positives = 33/55 (60%), Gaps = 1/55 (2%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
R+ H+ +E++RR+ + S L VPT + S K K+ +L A+++++ L GA
Sbjct 287 RKNHNFLERKRRNDLRSRFLALRDQVPTLASCS-KAPKVVILSKALEYLQALVGA 340
>sp|P23999|MYCS_RAT Protein S-Myc OS=Rattus norvegicus OX=10116
GN=Mycs PE=3 SV=1
Length=429
Score = 34.3 bits (77), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/53 (34%), Positives = 31/53 (58%), Gaps = 1/53 (2%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
R H+++E++RRD M S L LVP + K K+ +L+ A +++ TL+
Sbjct 348 RRNHNRMERQRRDIMRSSFLNLRDLVPEL-VHNEKAAKVVILKKATEYIHTLQ 399
>sp|O57337|HES1_CHICK Transcription factor HES-1 OS=Gallus gallus
OX=9031 GN=HES1 PE=2 SV=1
Length=290
Score = 33.9 bits (76), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/55 (33%), Positives = 33/55 (60%), Gaps = 8/55 (15%)
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMSR------KLDKLTVLRMAVQHMKTLRGA 128
+EKRRR ++N + +L L+ +A+ + KL+K +L M V+H++ L+ A
Sbjct 43 MEKRRRARINESLGQLKMLI--LDALKKDSSRHSKLEKADILEMTVKHLRNLQRA 95
>sp|Q0VCE2|HAND1_BOVIN Heart- and neural crest derivatives-expressed
protein 1 OS=Bos taurus OX=9913 GN=HAND1 PE=2 SV=1
Length=218
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/67 (33%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query 59 GRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMA 118
GRLE GR+ + + + E+RR + +NS EL +P A + KL K+ LR+A
Sbjct 86 GRLEAL--GGRLGRRKGSGPKKERRRTESINSAFAELRECIPNVPADT-KLSKIKTLRLA 142
Query 119 VQHMKTL 125
++ L
Sbjct 143 TSYIAYL 149
>sp|P12524|MYCL_HUMAN Protein L-Myc OS=Homo sapiens OX=9606 GN=MYCL
PE=1 SV=2
Length=364
Score = 33.9 bits (76), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/55 (33%), Positives = 33/55 (60%), Gaps = 1/55 (2%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
R+ H+ +E++RR+ + S L VPT + S K K+ +L A+++++ L GA
Sbjct 283 RKNHNFLERKRRNDLRSRFLALRDQVPTLASCS-KAPKVVILSKALEYLQALVGA 336
>sp|P29303|HAIR_DROVI Protein hairy OS=Drosophila virilis OX=7244
GN=hry PE=2 SV=2
Length=379
Score = 33.9 bits (76), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/64 (33%), Positives = 37/64 (58%), Gaps = 5/64 (8%)
Query 67 QGRIKNAREAHSQI-EKRRRDKMNSFIDELASLVPTCN----AMSRKLDKLTVLRMAVQH 121
+ IK+ R ++ I EKRRR ++N+ ++EL +L+ A KL+K +L V+H
Sbjct 32 EAPIKSDRRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKH 91
Query 122 MKTL 125
++ L
Sbjct 92 LQEL 95
>sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis
thaliana OX=3702 GN=BHLH74 PE=1 SV=1
Length=366
Score = 33.9 bits (76), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (51%), Gaps = 0/61 (0%)
Query 63 YTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
Y + R A +HS E+ RR+K++ + L LVP CN ++ K L + VQ +
Sbjct 203 YIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 262
Query 123 K 123
+
Sbjct 263 Q 263
>sp|Q01071|ESMD_DROME Enhancer of split mdelta protein OS=Drosophila
melanogaster OX=7227 GN=E(spl)mdelta-HLH PE=1 SV=1
Length=173
Score = 32.7 bits (73), Expect = 5.3, Method: Composition-based stats.
Identities = 18/48 (38%), Positives = 30/48 (63%), Gaps = 4/48 (8%)
Query 80 IEKRRRDKMNSFIDELASL-VPTCNAMSR---KLDKLTVLRMAVQHMK 123
+E++RR +MN ++DEL L V T +A KL+K +L + V ++K
Sbjct 23 LERKRRARMNLYLDELKDLIVDTMDAQGEQVSKLEKADILELTVNYLK 70
>sp|O96004|HAND1_HUMAN Heart- and neural crest derivatives-expressed
protein 1 OS=Homo sapiens OX=9606 GN=HAND1 PE=1 SV=1
Length=215
Score = 33.1 bits (74), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/67 (33%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query 59 GRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMA 118
GRLE GR+ + + + E+RR + +NS EL +P A + KL K+ LR+A
Sbjct 83 GRLEAL--GGRLGRRKGSGPKKERRRTESINSAFAELRECIPNVPADT-KLSKIKTLRLA 139
Query 119 VQHMKTL 125
++ L
Sbjct 140 TSYIAYL 146
>sp|Q9W6C7|NDF6B_DANRE Neurogenic differentiation factor 6-B OS=Danio
rerio OX=7955 GN=neurod6b PE=1 SV=3
Length=317
Score = 33.5 bits (75), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/57 (30%), Positives = 32/57 (56%), Gaps = 1/57 (2%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
R+K R+ + E+ R +N ++ L +VP C + ++KL K+ LR+A ++ L
Sbjct 75 RVKMRRQEANARERSRMHGLNDALESLRKVVP-CYSKTQKLSKIETLRLAKNYIWAL 130
>sp|Q0VH32|MNT_XENLA Max-binding protein MNT OS=Xenopus laevis
OX=8355 GN=mnt PE=2 SV=1
Length=574
Score = 33.9 bits (76), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/59 (31%), Positives = 33/59 (56%), Gaps = 2/59 (3%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
RE H+++EK RR + + L +P N +K L+VLR A++++++L+ Y
Sbjct 225 REVHNKLEKNRRAHLKECFETLKRNIP--NVDDKKTSNLSVLRSALRYIQSLKRKEKEY 281
>sp|Q62912|MAD3_RAT Max dimerization protein 3 OS=Rattus norvegicus
OX=10116 GN=Mxd3 PE=2 SV=1
Length=206
Score = 33.1 bits (74), Expect = 6.0, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 33/58 (57%), Gaps = 1/58 (2%)
Query 68 GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
G + + R H+++EKRRR ++ +++L +P +R L++LR A H++ L
Sbjct 53 GALNSGRHVHNELEKRRRAQLKRCLEQLRQQMPLGVDHTR-YTTLSLLRGARMHIQKL 109
>sp|P16497|KINA_BACSU Sporulation kinase A OS=Bacillus subtilis
(strain 168) OX=224308 GN=kinA PE=1 SV=2
Length=606
Score = 33.9 bits (76), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (66%), Gaps = 5/47 (11%)
Query 167 GKILFVSES---VFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSS 210
GK +F++ES +F+ Y DLIG++++D LHP D VKE++ +
Sbjct 286 GKWVFMNESGISLFEAATYE--DLIGKNIYDQLHPCDHEDVKERIQN 330
>sp|Q9UUD1|SREBP_SCHPO Sterol regulatory element-binding protein
1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
OX=284812 GN=sre1 PE=1 SV=1
Length=900
Score = 33.9 bits (76), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 19/85 (22%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAM-------------------SRKLDK 111
K + AH+ IEKR R +N I EL VP+ A +RKL+K
Sbjct 259 KPKKTAHNMIEKRYRTNLNDRICELRDAVPSLRAAAALRCGNSLDDEDLGGLTPARKLNK 318
Query 112 LTVLRMAVQHMKTLRGATNPYTEAN 136
T+L A ++++ L + N
Sbjct 319 GTILAKATEYIRHLEAKNKELQKTN 343
>sp|Q8XU10|KDPC_RALN1 Potassium-transporting ATPase KdpC subunit
OS=Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000)
OX=267608 GN=kdpC PE=3 SV=1
Length=204
Score = 33.1 bits (74), Expect = 6.1, Method: Composition-based stats.
Identities = 27/85 (32%), Positives = 38/85 (45%), Gaps = 4/85 (5%)
Query 533 SSPGGKKILNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSS 592
+ GG I GG P L GQ P Y + S+ NP+ G ++ G S+
Sbjct 51 AQAGGSIIERGGKP---VGSALIGQNFSEPQYFWGRLSAT-SPNPYNGAASSGSNLGPSN 106
Query 593 PSNDEAAMAVIMSLLEADAGLGGPV 617
P+ +AA A I +L EAD P+
Sbjct 107 PALTDAAKARIAALKEADPANTAPI 131
>sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis
thaliana OX=3702 GN=ILR3 PE=1 SV=1
Length=234
Score = 33.1 bits (74), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query 64 TEHQGRIKNAREAHSQI--EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQH 121
++ +GR +++ S+ EK+RRD++N EL +++ N K DK +L AV+
Sbjct 61 SKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPGNP--PKTDKAAILVDAVRM 118
Query 122 MKTLRGATNPYTEAN 136
+ LRG ++N
Sbjct 119 VTQLRGEAQKLKDSN 133
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis
thaliana OX=3702 GN=BHLH2 PE=1 SV=1
Length=596
Score = 33.5 bits (75), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
H+ EK+RR+K+N L S++P+ + K+DK+++L +++++ L+
Sbjct 406 HALSEKKRREKLNERFMTLRSIIPSIS----KIDKVSILDDTIEYLQDLQ 451
>sp|Q01068|ESM3_DROME Enhancer of split m3 protein OS=Drosophila
melanogaster OX=7227 GN=E(spl)m3-HLH PE=1 SV=1
Length=224
Score = 33.1 bits (74), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 29/51 (57%), Gaps = 4/51 (8%)
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMS----RKLDKLTVLRMAVQHMKTLR 126
+E++RR ++N +D+L L+ C +L+K +L + V HM+ L+
Sbjct 19 LERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDHMRKLK 69
>sp|Q04667|HES3_RAT Transcription factor HES-3 OS=Rattus norvegicus
OX=10116 GN=Hes3 PE=2 SV=1
Length=175
Score = 32.3 bits (72), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Query 80 IEKRRRDKMNSFIDELASLVP---TCNAMSRKLDKLTVLRMAVQHMKTLR 126
+EK+RR ++N +++L SL+ + RKL+K +L ++V+++++L+
Sbjct 1 MEKKRRARINLSLEQLRSLLERHYSHQIRKRKLEKADILELSVKYVRSLQ 50
>sp|P47185|HXT16_YEAST Hexose transporter HXT16 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HXT16
PE=3 SV=1
Length=567
Score = 33.5 bits (75), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 48/116 (41%), Gaps = 12/116 (10%)
Query 519 SSPLNITSTPPPDASSPGG---KKILNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGE 575
SS ++ PP + G K+++NG TPD P G L YP S + G
Sbjct 17 SSAADVHVQPPGEKEWSDGFYDKEVINGNTPDAPKRGFLGYLIIYLLCYPVSFGGFLPGW 76
Query 576 NPHIGIDMIDNDQ-----GSSSPSNDEAAMA-VIMSLLEADAGLG---GPVDFSDL 622
+ I I+ D GS S E ++ V M LL A +G G V F+ L
Sbjct 77 DSGITAGFINMDNFKMNFGSYKHSTGEYYLSNVRMGLLVAMFSVGCSIGGVAFARL 132
>sp|P54854|HXT15_YEAST Hexose transporter HXT15 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HXT15
PE=1 SV=1
Length=567
Score = 33.5 bits (75), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 48/116 (41%), Gaps = 12/116 (10%)
Query 519 SSPLNITSTPPPDASSPGG---KKILNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGE 575
SS ++ PP + G K+++NG TPD P G L YP S + G
Sbjct 17 SSAADVHVQPPGEKEWSDGFYDKEVINGNTPDAPKRGFLGYLIIYLLCYPVSFGGFLPGW 76
Query 576 NPHIGIDMIDNDQ-----GSSSPSNDEAAMA-VIMSLLEADAGLG---GPVDFSDL 622
+ I I+ D GS S E ++ V M LL A +G G V F+ L
Sbjct 77 DSGITAGFINMDNFKMNFGSYKHSTGEYYLSNVRMGLLVAMFSVGCSIGGVAFARL 132
>sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis
thaliana OX=3702 GN=BHLH63 PE=1 SV=1
Length=335
Score = 33.1 bits (74), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
+ +Y + R A ++HS E+ RR+K++ + L LVP C+ ++ K L + V
Sbjct 166 KTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYV 225
Query 120 QHM-KTLRGATNPYTEANYKPTFLSDD 145
Q + + + + N +P F DD
Sbjct 226 QSLQRQIEFLSMKLAIVNPRPDFDMDD 252
>sp|Q03062|HES5_RAT Transcription factor HES-5 OS=Rattus norvegicus
OX=10116 GN=Hes5 PE=2 SV=1
Length=166
Score = 32.3 bits (72), Expect = 8.0, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 30/47 (64%), Gaps = 3/47 (6%)
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMSR---KLDKLTVLRMAVQHMK 123
+EK RRD++NS I++L L+ A + KL+K +L MAV ++K
Sbjct 24 VEKMRRDRINSSIEQLKLLLEQEFARHQPNSKLEKADILEMAVSYLK 70
>sp|P38165|RTG3_YEAST Retrograde regulation protein 3 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RTG3
PE=1 SV=2
Length=486
Score = 33.1 bits (74), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/32 (41%), Positives = 21/32 (66%), Gaps = 0/32 (0%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVP 100
+++ RE H+ +E+RRR+ + I EL LVP
Sbjct 282 KLRRKREFHNAVERRRRELIKQKIKELGQLVP 313
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis
thaliana OX=3702 GN=BHLH18 PE=1 SV=1
Length=305
Score = 33.1 bits (74), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/55 (35%), Positives = 35/55 (64%), Gaps = 5/55 (9%)
Query 72 NAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
NA++ H E++RR+K+ L++L+P +K+DK +VL A++H+K L+
Sbjct 123 NAQD-HILAERKRREKLTQRFVALSALIPGL----KKMDKASVLGDAIKHIKYLQ 172
>sp|Q17R07|ARFG3_BOVIN ADP-ribosylation factor GTPase-activating
protein 3 OS=Bos taurus OX=9913 GN=ARFGAP3 PE=2 SV=1
Length=517
Score = 33.1 bits (74), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 38/154 (25%), Positives = 73/154 (47%), Gaps = 7/154 (5%)
Query 376 YFHQ---DDIGHLAECHRQVLQT-REKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEV 431
+FHQ D A+ + + Q RE+I + K G+ + L S +P KE
Sbjct 90 FFHQHGCDTNDTNAKYNSRAAQLYRERIKALASQATRKHGTDLWLDSCVVPPSSPPPKEE 149
Query 432 EYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAG 491
++ S + +++ G P+ + +P ++D+ S EG P++ P+V G+ T+A
Sbjct 150 DFFASHASPEVSST--GWASAQPEPSLTPRNVDAPAASSEGVPEQ-GPSVEGLNVPTKAA 206
Query 492 AGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNIT 525
G++ +I ++ + R G+ S G+ L+ T
Sbjct 207 VGEVSSIIKKKPNQAKRGLGAKKGSLGAQKLSNT 240
>sp|Q9CAA4|BIM2_ARATH Transcription factor BIM2 OS=Arabidopsis
thaliana OX=3702 GN=BIM2 PE=1 SV=1
Length=311
Score = 32.7 bits (73), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 18/106 (17%)
Query 34 DCNRKRKG--SSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSF 91
D N KR+G S+T + D+ ++D + R HS E+RRR K+N
Sbjct 17 DFNSKREGPSSNTTVHSNRDSKEND------------KASAIRSKHSVTEQRRRSKINER 64
Query 92 IDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANY 137
L L+P +K D + L + +++ L+ Y E +Y
Sbjct 65 FQILRELIPNS---EQKRDTASFLLEVIDYVQYLQEKVQKY-EGSY 106
>sp|Q80US8|MAD3_MOUSE Max dimerization protein 3 OS=Mus musculus
OX=10090 GN=Mxd3 PE=1 SV=1
Length=206
Score = 32.3 bits (72), Expect = 9.1, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 33/58 (57%), Gaps = 1/58 (2%)
Query 68 GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
G + + R H+++EKRRR ++ +++L +P +R L++LR A H++ L
Sbjct 53 GALNSGRSVHNELEKRRRAQLKRCLEQLRQQMPLGVDCTR-YTTLSLLRRARVHIQKL 109
>sp|Q9NX45|SOLH2_HUMAN Spermatogenesis- and oogenesis-specific
basic helix-loop-helix-containing protein 2 OS=Homo sapiens
OX=9606 GN=SOHLH2 PE=1 SV=2
Length=425
Score = 33.1 bits (74), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (49%), Gaps = 2/68 (3%)
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEAN 136
HS EK RR+++ ++L +L+P RK D +VL V ++K +R +P A
Sbjct 206 HSSKEKLRRERIKYCCEQLRTLLPYVKG--RKNDAASVLEATVDYVKYIREKISPAVMAQ 263
Query 137 YKPTFLSD 144
S+
Sbjct 264 ITEALQSN 271
>sp|P14003|HAIR_DROME Protein hairy OS=Drosophila melanogaster
OX=7227 GN=hry PE=1 SV=2
Length=337
Score = 32.7 bits (73), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/61 (33%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query 70 IKNAREAHSQI-EKRRRDKMNSFIDELASLVPTCN----AMSRKLDKLTVLRMAVQHMKT 124
+K+ R ++ I EKRRR ++N+ ++EL +L+ A KL+K +L V+H++
Sbjct 28 LKSDRRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQE 87
Query 125 L 125
L
Sbjct 88 L 88
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis
thaliana OX=3702 GN=BHLH14 PE=1 SV=1
Length=423
Score = 32.7 bits (73), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (63%), Gaps = 4/51 (8%)
Query 76 AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
+H + EK+RR+K+N L ++VP + M DK ++L AV ++++L+
Sbjct 249 SHVEAEKQRREKLNHRFYALRAIVPKVSRM----DKASLLSDAVSYIESLK 295
Lambda K H a alpha
0.316 0.133 0.398 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 68412876260
Results from round 2
Query= sp|O00327|BMAL1_HUMAN Basic helix-loop-helix ARNT-like protein 1
OS=Homo sapiens OX=9606 GN=BMAL1 PE=1 SV=2
Length=626
Score E
Sequences producing significant alignments: (Bits) Value
Sequences used in model and found again:
sp|O00327|BMAL1_HUMAN Basic helix-loop-helix ARNT-like protein 1 ... 883 0.0
sp|O88529|BMAL1_MESAU Basic helix-loop-helix ARNT-like protein 1 ... 880 0.0
sp|Q5R4T2|BMAL1_PONAB Basic helix-loop-helix ARNT-like protein 1 ... 876 0.0
sp|Q9EPW1|BMAL1_RAT Basic helix-loop-helix ARNT-like protein 1 OS... 873 0.0
sp|Q91YA9|BMAL1_NANGA Basic helix-loop-helix ARNT-like protein 1 ... 873 0.0
sp|A0MLS5|BMAL1_HORSE Basic helix-loop-helix ARNT-like protein 1 ... 872 0.0
sp|Q9WTL8|BMAL1_MOUSE Basic helix-loop-helix ARNT-like protein 1 ... 867 0.0
sp|Q6YGZ5|BMAL1_TYTAL Basic helix-loop-helix ARNT-like protein 1 ... 839 0.0
sp|Q9I8T7|BMAL1_CHICK Basic helix-loop-helix ARNT-like protein 1 ... 832 0.0
sp|Q8QGQ7|BMAL2_CHICK Basic helix-loop-helix ARNT-like protein 2 ... 693 0.0
sp|Q8WYA1|BMAL2_HUMAN Basic helix-loop-helix ARNT-like protein 2 ... 675 0.0
sp|Q2VPD4|BMAL2_MOUSE Basic helix-loop-helix ARNT-like protein 2 ... 570 0.0
sp|Q9DG12|ARNT2_DANRE Aryl hydrocarbon receptor nuclear transloca... 446 6e-147
sp|Q61324|ARNT2_MOUSE Aryl hydrocarbon receptor nuclear transloca... 438 4e-144
sp|Q78E60|ARNT2_RAT Aryl hydrocarbon receptor nuclear translocato... 437 5e-144
sp|Q9HBZ2|ARNT2_HUMAN Aryl hydrocarbon receptor nuclear transloca... 434 1e-142
sp|O02748|ARNT_RABIT Aryl hydrocarbon receptor nuclear translocat... 428 2e-139
sp|P27540|ARNT_HUMAN Aryl hydrocarbon receptor nuclear translocat... 428 3e-139
sp|Q9BE97|ARNT_BOVIN Aryl hydrocarbon receptor nuclear translocat... 426 1e-138
sp|O61734|CYCL_DROME Protein cycle OS=Drosophila melanogaster OX=... 411 8e-138
sp|P79832|ARNT_ONCMY Aryl hydrocarbon receptor nuclear translocat... 416 1e-135
sp|P53762|ARNT_MOUSE Aryl hydrocarbon receptor nuclear translocat... 417 3e-135
sp|P41739|ARNT_RAT Aryl hydrocarbon receptor nuclear translocator... 415 3e-134
sp|O15945|ARNT_DROME Aryl hydrocarbon receptor nuclear translocat... 408 1e-133
sp|Q9YIB9|HIF1A_CHICK Hypoxia-inducible factor 1-alpha OS=Gallus ... 358 3e-112
sp|Q309Z6|HIF1A_EOSFB Hypoxia-inducible factor 1-alpha OS=Eospala... 353 4e-110
sp|Q61221|HIF1A_MOUSE Hypoxia-inducible factor 1-alpha OS=Mus mus... 351 1e-109
sp|Q0PGG7|HIF1A_BOSMU Hypoxia-inducible factor 1-alpha OS=Bos mut... 350 3e-109
sp|O35800|HIF1A_RAT Hypoxia-inducible factor 1-alpha OS=Rattus no... 349 1e-108
sp|Q16665|HIF1A_HUMAN Hypoxia-inducible factor 1-alpha OS=Homo sa... 349 1e-108
sp|Q9XTA5|HIF1A_BOVIN Hypoxia-inducible factor 1-alpha OS=Bos tau... 349 1e-108
sp|O02219|AHA1_CAEEL Aryl hydrocarbon receptor nuclear translocat... 336 4e-108
sp|Q24119|TRH_DROME Protein trachealess OS=Drosophila melanogaste... 350 3e-107
sp|Q99814|EPAS1_HUMAN Endothelial PAS domain-containing protein 1... 344 3e-106
sp|A1YFY6|SIM1_PANPA Single-minded homolog 1 OS=Pan paniscus OX=9... 333 2e-103
sp|P97481|EPAS1_MOUSE Endothelial PAS domain-containing protein 1... 335 5e-103
sp|Q9JHS1|EPAS1_RAT Endothelial PAS domain-containing protein 1 O... 334 9e-103
sp|Q98SJ5|SIM1A_DANRE Single-minded homolog 1-A OS=Danio rerio OX... 331 1e-102
sp|A2T6X9|SIM1_PANTR Single-minded homolog 1 OS=Pan troglodytes O... 330 3e-102
sp|P81133|SIM1_HUMAN Single-minded homolog 1 OS=Homo sapiens OX=9... 330 3e-102
sp|Q61045|SIM1_MOUSE Single-minded homolog 1 OS=Mus musculus OX=1... 329 7e-102
sp|Q6YGZ4|CLOCK_TYTAL Circadian locomoter output cycles protein k... 325 2e-99
sp|P05709|SIM_DROME Protein single-minded OS=Drosophila melanogas... 321 3e-99
sp|Q61079|SIM2_MOUSE Single-minded homolog 2 OS=Mus musculus OX=1... 319 4e-99
sp|O08785|CLOCK_MOUSE Circadian locomoter output cycles protein k... 323 2e-98
sp|Q14190|SIM2_HUMAN Single-minded homolog 2 OS=Homo sapiens OX=9... 318 2e-98
sp|Q91YB2|CLOCK_SPACA Circadian locomoter output cycles protein k... 322 4e-98
sp|Q5RAK8|CLOCK_PONAB Circadian locomoter output cycles protein k... 321 4e-98
sp|Q91YB0|CLOCK_NANGA Circadian locomoter output cycles protein k... 322 5e-98
sp|Q9WVS9|CLOCK_RAT Circadian locomoter output cycles protein kap... 321 5e-98
sp|O15516|CLOCK_HUMAN Circadian locomoter output cycles protein k... 321 8e-98
sp|Q98SW2|HIF1A_ONCMY Hypoxia-inducible factor 1-alpha OS=Oncorhy... 318 1e-97
sp|Q8QGQ6|CLOCK_CHICK Circadian locomoter output cycles protein k... 320 2e-97
sp|Q91YA8|CLOCK_SPAJD Circadian locomoter output cycles protein k... 318 2e-96
sp|Q0VBL6|HIF3A_MOUSE Hypoxia-inducible factor 3-alpha OS=Mus mus... 306 8e-94
sp|Q9Y2N7|HIF3A_HUMAN Hypoxia-inducible factor 3-alpha OS=Homo sa... 302 1e-92
sp|Q9JHS2|HIF3A_RAT Hypoxia-inducible factor 3-alpha OS=Rattus no... 299 3e-91
sp|Q8K3T2|PER2_SPAJD Period circadian protein homolog 2 OS=Spalax... 307 2e-90
sp|Q9QZQ0|NPAS3_MOUSE Neuronal PAS domain-containing protein 3 OS... 299 7e-89
sp|Q5ZQU2|NPAS2_CHICK Neuronal PAS domain-containing protein 2 OS... 295 2e-88
sp|P97460|NPAS2_MOUSE Neuronal PAS domain-containing protein 2 OS... 295 2e-88
sp|Q9I8A9|HIF1A_XENLA Hypoxia-inducible factor 1-alpha OS=Xenopus... 292 1e-87
sp|Q99743|NPAS2_HUMAN Neuronal PAS domain-containing protein 2 OS... 290 1e-86
sp|O54943|PER2_MOUSE Period circadian protein homolog 2 OS=Mus mu... 297 2e-86
sp|Q8IXF0|NPAS3_HUMAN Neuronal PAS domain-containing protein 3 OS... 292 2e-86
sp|Q8R4S5|AHR_MUSMM Aryl hydrocarbon receptor OS=Mus musculus mol... 291 2e-86
sp|Q8R4S6|AHR_MUSMC Aryl hydrocarbon receptor OS=Mus musculus cas... 290 4e-86
sp|Q9Z301|PER2_RAT Period circadian protein homolog 2 OS=Rattus n... 296 4e-86
sp|P30561|AHR_MOUSE Aryl hydrocarbon receptor OS=Mus musculus OX=... 289 5e-86
sp|O02747|AHR_RABIT Aryl hydrocarbon receptor OS=Oryctolagus cuni... 284 3e-84
sp|Q8R4S4|AHR_MUSSI Aryl hydrocarbon receptor OS=Mus spicilegus O... 284 7e-84
sp|Q8R4S7|AHR_MUSCR Aryl hydrocarbon receptor OS=Mus caroli OX=10... 284 8e-84
sp|Q8R4S2|AHR_MUSSP Aryl hydrocarbon receptor OS=Mus spretus OX=1... 284 8e-84
sp|P35869|AHR_HUMAN Aryl hydrocarbon receptor OS=Homo sapiens OX=... 283 9e-84
sp|P41738|AHR_RAT Aryl hydrocarbon receptor OS=Rattus norvegicus ... 282 2e-83
sp|Q95LD9|AHR_DELLE Aryl hydrocarbon receptor OS=Delphinapterus l... 280 1e-82
sp|O61735|CLOCK_DROME Circadian locomoter output cycles protein k... 276 4e-80
sp|O15055|PER2_HUMAN Period circadian protein homolog 2 OS=Homo s... 279 4e-80
sp|P97459|NPAS1_MOUSE Neuronal PAS domain-containing protein 1 OS... 267 8e-80
sp|Q99742|NPAS1_HUMAN Neuronal PAS domain-containing protein 1 OS... 261 7e-78
sp|Q8CHI5|PER1_RAT Period circadian protein homolog 1 OS=Rattus n... 272 1e-77
sp|O57539|NCOA3_XENLA Nuclear receptor coactivator 3 OS=Xenopus l... 272 1e-77
sp|Q24167|SIMA_DROME Protein similar OS=Drosophila melanogaster O... 270 1e-76
sp|O15534|PER1_HUMAN Period circadian protein homolog 1 OS=Homo s... 269 1e-76
sp|Q15596|NCOA2_HUMAN Nuclear receptor coactivator 2 OS=Homo sapi... 268 4e-76
sp|Q8K3T3|PER1_SPAJD Period circadian protein homolog 1 OS=Spalax... 267 5e-76
sp|O35973|PER1_MOUSE Period circadian protein homolog 1 OS=Mus mu... 266 1e-75
sp|Q61026|NCOA2_MOUSE Nuclear receptor coactivator 2 OS=Mus muscu... 265 6e-75
sp|Q9W705|NCOA2_XENLA Nuclear receptor coactivator 2 OS=Xenopus l... 261 1e-73
sp|Q8QGQ8|PER2_CHICK Period circadian protein homolog 2 OS=Gallus... 260 2e-73
sp|Q9WUI9|NCOA2_RAT Nuclear receptor coactivator 2 OS=Rattus norv... 260 2e-73
sp|Q8CJE2|PER3_RAT Period circadian protein homolog 3 OS=Rattus n... 259 2e-73
sp|Q98TW1|NCOA2_DANRE Nuclear receptor coactivator 2 OS=Danio rer... 260 3e-73
sp|B5DE09|NCOA2_XENTR Nuclear receptor coactivator 2 OS=Xenopus t... 259 5e-73
sp|Q9Y6Q9|NCOA3_HUMAN Nuclear receptor coactivator 3 OS=Homo sapi... 259 6e-73
sp|O70361|PER3_MOUSE Period circadian protein homolog 3 OS=Mus mu... 257 7e-73
sp|P56645|PER3_HUMAN Period circadian protein homolog 3 OS=Homo s... 247 3e-69
sp|O09000|NCOA3_MOUSE Nuclear receptor coactivator 3 OS=Mus muscu... 236 3e-65
sp|Q03355|PER_DROSI Period circadian protein (Fragments) OS=Droso... 227 1e-64
sp|Q25637|PER_PERAM Period circadian protein OS=Periplaneta ameri... 230 3e-64
sp|P70365|NCOA1_MOUSE Nuclear receptor coactivator 1 OS=Mus muscu... 230 3e-63
sp|Q03354|PER_DROSE Period circadian protein (Fragments) OS=Droso... 224 3e-63
sp|Q03353|PER_DROMA Period circadian protein (Fragments) OS=Droso... 224 3e-63
sp|Q15788|NCOA1_HUMAN Nuclear receptor coactivator 1 OS=Homo sapi... 228 1e-62
sp|Q4PJW2|NCOA1_PIG Nuclear receptor coactivator 1 OS=Sus scrofa ... 227 3e-62
sp|Q17062|PER_ANTPE Period circadian protein OS=Antheraea pernyi ... 219 2e-60
sp|Q25020|PER_HYACE Period circadian protein (Fragment) OS=Hyalop... 207 7e-60
sp|Q03297|PER_DROWI Period circadian protein (Fragment) OS=Drosop... 217 8e-59
sp|Q25478|PER_MANSE Period circadian protein (Fragment) OS=Manduc... 200 2e-57
sp|G5EFL9|NPASH_CAEEL PAS domain-containing protein cky-1 OS=Caen... 208 3e-57
sp|P07663|PER_DROME Period circadian protein OS=Drosophila melano... 211 8e-57
sp|Q24767|PER_DROYA Period circadian protein OS=Drosophila yakuba... 210 1e-56
sp|P12348|PER_DROPS Period circadian protein OS=Drosophila pseudo... 210 2e-56
sp|P12349|PER_DROVI Period circadian protein OS=Drosophila virili... 201 1e-53
sp|O44712|AHR_CAEEL Aryl hydrocarbon receptor protein 1 OS=Caenor... 189 4e-51
sp|G5EGD2|HIF1_CAEEL Hypoxia-inducible factor 1 OS=Caenorhabditis... 184 1e-48
sp|Q3U1U7|AHRR_MOUSE Aryl hydrocarbon receptor repressor OS=Mus m... 174 4e-45
sp|Q75NT5|AHRR_RAT Aryl hydrocarbon receptor repressor OS=Rattus ... 172 3e-44
sp|Q8CJH6|NPAS4_RAT Neuronal PAS domain-containing protein 4 OS=R... 167 2e-42
sp|Q8IUM7|NPAS4_HUMAN Neuronal PAS domain-containing protein 4 OS... 166 4e-42
sp|Q8BGD7|NPAS4_MOUSE Neuronal PAS domain-containing protein 4 OS... 165 1e-41
sp|A9YTQ3|AHRR_HUMAN Aryl hydrocarbon receptor repressor OS=Homo ... 160 4e-40
sp|P90953|HLH34_CAEEL Helix-loop-helix 34 OS=Caenorhabditis elega... 152 5e-40
sp|P0DOC7|NPS4L_DANRE Neuronal PAS domain-containing protein 4-li... 158 8e-40
sp|E7FFX1|NPS4B_DANRE Neuronal PAS domain-containing protein 4B O... 157 4e-39
sp|Q1ECW2|NPS4A_DANRE Neuronal PAS domain-containing protein 4A O... 155 3e-38
sp|Q65ZG8|PER_CAEEL Period protein homolog lin-42 OS=Caenorhabdit... 118 1e-26
sp|Q6AT90|APG_ORYSJ Transcription factor APG OS=Oryza sativa subs... 90.3 9e-18
sp|Q63665|USF2_RAT Upstream stimulatory factor 2 OS=Rattus norveg... 86.1 7e-17
sp|Q64705|USF2_MOUSE Upstream stimulatory factor 2 OS=Mus musculu... 86.1 7e-17
sp|Q15853|USF2_HUMAN Upstream stimulatory factor 2 OS=Homo sapien... 85.3 1e-16
sp|Q9I9L0|HEY2_DANRE Hairy/enhancer-of-split related with YRPW mo... 81.5 2e-15
sp|Q9UBP5|HEY2_HUMAN Hairy/enhancer-of-split related with YRPW mo... 81.5 2e-15
sp|O02818|USF1_RABIT Upstream stimulatory factor 1 OS=Oryctolagus... 81.1 2e-15
sp|P22415|USF1_HUMAN Upstream stimulatory factor 1 OS=Homo sapien... 80.7 3e-15
sp|Q6XBT4|USF1_BOVIN Upstream stimulatory factor 1 OS=Bos taurus ... 80.3 3e-15
sp|Q61069|USF1_MOUSE Upstream stimulatory factor 1 OS=Mus musculu... 80.3 3e-15
sp|Q0JNI9|PIL15_ORYSJ Transcription factor PHYTOCHROME INTERACTIN... 79.9 2e-14
sp|Q9QUS4|HEY2_MOUSE Hairy/enhancer-of-split related with YRPW mo... 78.0 3e-14
sp|Q2NL18|HEYL_BOVIN Hairy/enhancer-of-split related with YRPW mo... 77.3 4e-14
sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis tha... 78.8 4e-14
sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis tha... 78.8 4e-14
sp|Q9DBX7|HEYL_MOUSE Hairy/enhancer-of-split related with YRPW mo... 76.9 6e-14
sp|Q8AXV5|HEYL_DANRE Hairy/enhancer-of-split related with YRPW mo... 76.5 6e-14
sp|Q5A1E3|CBF1_CANAL Transcriptional regulator CBF1 OS=Candida al... 74.9 1e-13
sp|Q9NQ87|HEYL_HUMAN Hairy/enhancer-of-split related with YRPW mo... 75.3 2e-13
sp|Q6QB00|HELT_DANRE Hairy and enhancer of split-related protein ... 74.2 3e-13
sp|Q10CH5|PIL13_ORYSJ Transcription factor PHYTOCHROME INTERACTIN... 74.6 7e-13
sp|Q9VGZ5|CWO_DROME Transcription factor cwo OS=Drosophila melano... 74.9 1e-12
sp|Q9WV93|HEY1_MOUSE Hairy/enhancer-of-split related with YRPW mo... 72.2 2e-12
sp|Q8AXV6|HEY1_DANRE Hairy/enhancer-of-split related with YRPW mo... 71.9 3e-12
sp|Q9TSZ2|HEY1_CANLF Hairy/enhancer-of-split related with YRPW mo... 71.5 3e-12
sp|Q9Y5J3|HEY1_HUMAN Hairy/enhancer-of-split related with YRPW mo... 71.5 3e-12
sp|Q9I8A3|HEY1_XENLA Hairy/enhancer-of-split related with YRPW mo... 70.7 5e-12
sp|A6NFD8|HELT_HUMAN Hairy and enhancer of split-related protein ... 69.5 6e-12
sp|Q66KK8|HEY1_XENTR Hairy/enhancer-of-split related with YRPW mo... 70.3 6e-12
sp|Q2KIN4|HEY1_BOVIN Hairy/enhancer-of-split related with YRPW mo... 70.3 6e-12
sp|Q7TS99|HELT_MOUSE Hairy and enhancer of split-related protein ... 68.0 2e-11
sp|Q7KM13|HEY_DROME Hairy/enhancer-of-split related with YRPW mot... 66.9 2e-10
sp|O43019|SRE2_SCHPO Putative transcription factor sre2 OS=Schizo... 57.6 3e-07
Sequences not found previously or not previously below threshold:
sp|Q9EPU2|NCOA3_RAT Nuclear receptor coactivator 3 (Fragment) OS=... 83.4 3e-15
sp|Q07957|USF1_XENBO Upstream stimulatory factor 1 OS=Xenopus bor... 78.4 2e-14
sp|Q07956|USF_STRPU Upstream stimulatory factor OS=Strongylocentr... 69.5 9e-12
sp|O14503|BHE40_HUMAN Class E basic helix-loop-helix protein 40 O... 68.4 6e-11
sp|Q5RAI7|BHE40_PONAB Class E basic helix-loop-helix protein 40 O... 68.0 9e-11
sp|Q10186|YAWC_SCHPO Uncharacterized bHLH domain-containing prote... 64.9 1e-10
sp|Q5EA15|BHE40_BOVIN Class E basic helix-loop-helix protein 40 O... 67.6 1e-10
sp|B3F209|BHE40_SHEEP Class E basic helix-loop-helix protein 40 O... 67.2 1e-10
sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis t... 67.2 2e-10
sp|O35780|BHE40_RAT Class E basic helix-loop-helix protein 40 OS=... 66.9 2e-10
sp|O35185|BHE40_MOUSE Class E basic helix-loop-helix protein 40 O... 66.5 3e-10
sp|A0A286LEZ9|PSIR_PSICY Psilocybin cluster transcription regulat... 65.7 4e-10
sp|P19484|TFEB_HUMAN Transcription factor EB OS=Homo sapiens OX=9... 64.9 1e-09
sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis t... 64.2 1e-09
sp|H2KZZ2|HLH30_CAEEL Helix-loop-helix protein 30 OS=Caenorhabdit... 64.5 1e-09
sp|Q9R210|TFEB_MOUSE Transcription factor EB OS=Mus musculus OX=1... 64.2 2e-09
sp|P0DPB0|PSIR_PSICU Psilocybin cluster transcription regulator O... 63.4 2e-09
sp|P49379|CBF1_KLULA Centromere-binding protein 1 OS=Kluyveromyce... 63.4 2e-09
sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis tha... 63.4 2e-09
sp|Q64092|TFE3_MOUSE Transcription factor E3 OS=Mus musculus OX=1... 64.2 2e-09
sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thali... 61.1 3e-09
sp|O75030|MITF_HUMAN Microphthalmia-associated transcription fact... 63.8 3e-09
sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY... 62.2 3e-09
sp|P19532|TFE3_HUMAN Transcription factor E3 OS=Homo sapiens OX=9... 63.0 5e-09
sp|E3SXU4|BHLHW_PEA Basic helix-loop-helix protein A OS=Pisum sat... 62.6 7e-09
sp|Q05B92|TFE3_BOVIN Transcription factor E3 OS=Bos taurus OX=991... 62.2 7e-09
sp|O88368|MITF_RAT Microphthalmia-associated transcription factor... 61.5 1e-08
sp|Q08874|MITF_MOUSE Microphthalmia-associated transcription fact... 61.5 1e-08
sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis ... 61.5 2e-08
sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Ar... 61.1 2e-08
sp|Q6GQ26|SRBP2_XENLA Sterol regulatory element-binding protein 2... 61.5 2e-08
sp|P70120|HES5_MOUSE Transcription factor HES-5 OS=Mus musculus O... 57.2 3e-08
sp|Q5TA89|HES5_HUMAN Transcription factor HES-5 OS=Homo sapiens O... 56.8 3e-08
sp|Q4WIN1|SRBA_ASPFU Transcription regulator srbA precursor OS=As... 60.7 3e-08
sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=A... 60.3 3e-08
sp|O97676|SRBP1_PIG Sterol regulatory element-binding protein 1 O... 60.7 3e-08
sp|P17106|CBF1_YEAST Centromere-binding protein 1 OS=Saccharomyce... 59.1 4e-08
sp|A0A3Q7H216|MTB3_SOLLC Transcription factor MTB3 OS=Solanum lyc... 59.9 4e-08
sp|Q9C0J9|BHE41_HUMAN Class E basic helix-loop-helix protein 41 O... 59.9 4e-08
sp|O35779|BHE41_RAT Class E basic helix-loop-helix protein 41 OS=... 59.5 4e-08
sp|P38165|RTG3_YEAST Retrograde regulation protein 3 OS=Saccharom... 59.5 5e-08
sp|Q60416|SRBP1_CRIGR Sterol regulatory element-binding protein 1... 59.9 6e-08
sp|Q3T1I5|SRBP2_RAT Sterol regulatory element-binding protein 2 O... 59.9 6e-08
sp|A0A2R6QE26|BHL42_ACTCC Transcription factor BHLH42 OS=Actinidi... 59.5 6e-08
sp|A0A3Q7ELQ2|MTB1_SOLLC Transcription factor MTB1 OS=Solanum lyc... 59.5 6e-08
sp|Q3U1N2|SRBP2_MOUSE Sterol regulatory element-binding protein 2... 59.9 6e-08
sp|Q60429|SRBP2_CRIGR Sterol regulatory element-binding protein 2... 59.5 7e-08
sp|Q12772|SRBP2_HUMAN Sterol regulatory element-binding protein 2... 59.5 7e-08
sp|Q9WTN3|SRBP1_MOUSE Sterol regulatory element-binding protein 1... 59.5 7e-08
sp|Q01071|ESMD_DROME Enhancer of split mdelta protein OS=Drosophi... 56.1 8e-08
sp|Q99PV5|BHE41_MOUSE Class E basic helix-loop-helix protein 41 O... 58.8 8e-08
sp|P56720|SRBP1_RAT Sterol regulatory element-binding protein 1 O... 59.5 9e-08
sp|Q9XEF0|BH051_ARATH Transcription factor bHLH51 OS=Arabidopsis ... 57.2 1e-07
sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis ... 58.4 1e-07
sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thali... 58.4 1e-07
sp|P36956|SRBP1_HUMAN Sterol regulatory element-binding protein 1... 58.8 1e-07
sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE ... 58.4 1e-07
sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea ma... 58.0 2e-07
sp|Q03062|HES5_RAT Transcription factor HES-5 OS=Rattus norvegicu... 54.5 2e-07
sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis... 56.1 2e-07
sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis ... 57.2 2e-07
sp|Q26263|DPN_DROME Protein deadpan OS=Drosophila melanogaster OX... 57.2 2e-07
sp|Q570R7|PIF7_ARATH Transcription factor PIF7 OS=Arabidopsis tha... 56.5 3e-07
sp|Q9FMB6|BIM3_ARATH Transcription factor BIM3 OS=Arabidopsis tha... 56.1 3e-07
sp|P91664|MAX_DROME Protein max OS=Drosophila melanogaster OX=722... 53.8 3e-07
sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea may... 57.2 3e-07
sp|Q336P5|MYC2_ORYSJ Transcription factor MYC2 OS=Oryza sativa su... 57.2 3e-07
sp|O08609|MLX_MOUSE Max-like protein X OS=Mus musculus OX=10090 G... 56.1 4e-07
sp|O49687|MYC4_ARATH Transcription factor MYC4 OS=Arabidopsis tha... 56.8 4e-07
sp|Q9UH92|MLX_HUMAN Max-like protein X OS=Homo sapiens OX=9606 GN... 55.7 4e-07
sp|A0A060KY90|MYC1_SOLLC Transcription factor MYC1 OS=Solanum lyc... 56.5 5e-07
sp|Q9CAA4|BIM2_ARATH Transcription factor BIM2 OS=Arabidopsis tha... 55.7 5e-07
sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis th... 55.3 6e-07
sp|Q9LEZ3|BIM1_ARATH Transcription factor BIM1 OS=Arabidopsis tha... 56.1 7e-07
sp|Q01371|WC1_NEUCR White collar 1 protein OS=Neurospora crassa (... 56.1 8e-07
sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thali... 55.3 8e-07
sp|Q84LH8|PIF5_ARATH Transcription factor PIF5 OS=Arabidopsis tha... 55.7 8e-07
sp|A3KNA7|SRBP2_DANRE Sterol regulatory element-binding protein 2... 56.1 1e-06
sp|A0A3Q7HRZ6|MYC2_SOLLC Transcription factor MYC2 OS=Solanum lyc... 55.7 1e-06
sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis... 54.1 1e-06
sp|Q9LTS4|BH041_ARATH Putative transcription factor bHLH041 OS=Ar... 54.9 1e-06
sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis ... 55.3 1e-06
sp|Q39204|MYC2_ARATH Transcription factor MYC2 OS=Arabidopsis tha... 54.9 2e-06
sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis ... 54.5 2e-06
sp|G5EEH5|MXL1_CAEEL Max-like protein 1 OS=Caenorhabditis elegans... 51.1 2e-06
sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis tha... 54.9 2e-06
sp|Q9FIP9|MYC3_ARATH Transcription factor MYC3 OS=Arabidopsis tha... 54.9 2e-06
sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis t... 54.5 2e-06
sp|Q9D489|SOLH2_MOUSE Spermatogenesis- and oogenesis-specific bas... 54.5 2e-06
sp|Q9HCC6|HES4_HUMAN Transcription factor HES-4 OS=Homo sapiens O... 52.6 2e-06
sp|A3BV95|BCL1_ORYSJ Basic helix-loop-helix protein 80 OS=Oryza s... 53.4 2e-06
sp|A2YXI4|BCL1_ORYSI Basic helix-loop-helix protein 80 OS=Oryza s... 53.4 2e-06
sp|P07270|PHO4_YEAST Phosphate system positive regulatory protein... 53.4 3e-06
sp|Q3MHT3|SOLH2_RAT Spermatogenesis- and oogenesis-specific basic... 53.8 3e-06
sp|Q0J0G7|BC1_ORYSJ Transcription factor BC1 OS=Oryza sativa subs... 53.0 3e-06
sp|A0A0N7KIY3|BH156_ORYSJ Transcription factor BHLH156 OS=Oryza s... 53.4 3e-06
sp|P35805|MCL1B_XENLA Protein L-Myc-1-B OS=Xenopus laevis OX=8355... 53.4 3e-06
sp|Q9C670|BH076_ARATH Transcription factor bHLH76 OS=Arabidopsis ... 53.4 3e-06
sp|Q9FE22|HFR1_ARATH Transcription factor HFR1 OS=Arabidopsis tha... 53.0 3e-06
sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis ... 52.6 4e-06
sp|P35428|HES1_MOUSE Transcription factor HES-1 OS=Mus musculus O... 52.6 4e-06
sp|Q01068|ESM3_DROME Enhancer of split m3 protein OS=Drosophila m... 51.8 4e-06
sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis ... 52.6 5e-06
sp|Q8W2F3|PIF4_ARATH Transcription factor PIF4 OS=Arabidopsis tha... 53.0 5e-06
sp|P57100|HAND1_RABIT Heart- and neural crest derivatives-express... 51.4 5e-06
sp|O57337|HES1_CHICK Transcription factor HES-1 OS=Gallus gallus ... 52.2 5e-06
sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis ... 52.2 6e-06
sp|P78714|WC2_NEUCR White collar 2 protein OS=Neurospora crassa (... 53.0 6e-06
sp|Q84T08|BH089_ORYSJ Transcription factor BHLH089 OS=Oryza sativ... 51.8 6e-06
sp|Q0VCE2|HAND1_BOVIN Heart- and neural crest derivatives-express... 51.1 7e-06
sp|O96004|HAND1_HUMAN Heart- and neural crest derivatives-express... 51.1 7e-06
sp|P13097|ESM7_DROME Enhancer of split m7 protein OS=Drosophila m... 50.7 7e-06
sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis ... 51.8 8e-06
sp|Q28DB3|MAD3_XENTR Max dimerization protein 3 OS=Xenopus tropic... 50.7 8e-06
sp|Q14469|HES1_HUMAN Transcription factor HES-1 OS=Homo sapiens O... 51.8 8e-06
sp|Q93W88|BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis... 51.8 8e-06
sp|A0A3Q7HES4|MTB2_SOLLC Transcription factor MTB2 OS=Solanum lyc... 52.6 8e-06
sp|Q04666|HES1_RAT Transcription factor HES-1 OS=Rattus norvegicu... 51.4 8e-06
sp|O73615|HAND1_XENLA Heart- and neural crest derivatives-express... 50.7 8e-06
sp|Q0VH33|MAD3_XENLA Max dimerization protein 3 OS=Xenopus laevis... 50.7 8e-06
sp|Q3ZBG4|HES1_BOVIN Transcription factor HES-1 OS=Bos taurus OX=... 51.4 9e-06
sp|Q9LET0|BH107_ARATH Putative transcription factor bHLH107 OS=Ar... 51.1 9e-06
sp|Q9LN95|BH055_ARATH Transcription factor bHLH55 OS=Arabidopsis ... 51.1 1e-05
sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis tha... 50.7 1e-05
sp|Q9FKQ6|BH099_ARATH Transcription factor bHLH99 OS=Arabidopsis ... 51.1 1e-05
sp|Q28555|HAND1_SHEEP Heart- and neural crest derivatives-express... 49.9 1e-05
sp|Q00P32|HES2_XENLA Transcription factor HES-2 OS=Xenopus laevis... 49.5 1e-05
sp|P97832|HAND1_RAT Heart- and neural crest derivatives-expressed... 49.9 2e-05
sp|Q69WS3|BH094_ORYSJ Transcription factor BHLH094 OS=Oryza sativ... 50.3 2e-05
sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis ... 51.1 2e-05
sp|P16497|KINA_BACSU Sporulation kinase A OS=Bacillus subtilis (s... 51.4 2e-05
sp|Q59RL7|CPH2_CANAL Transcription factor CPH2 OS=Candida albican... 51.4 2e-05
sp|O81900|DYT1_ARATH Transcription factor DYT1 OS=Arabidopsis tha... 49.5 2e-05
sp|Q0JEB7|BH006_ORYSJ Transcription factor BHLH6 OS=Oryza sativa ... 50.3 2e-05
sp|Q9LSQ3|LRL3_ARATH Transcription factor LRL3 OS=Arabidopsis tha... 50.3 2e-05
sp|Q8VZ02|BH048_ARATH Transcription factor bHLH48 OS=Arabidopsis ... 50.3 3e-05
sp|Q6YUS3|TDR_ORYSJ Transcription factor TDR OS=Oryza sativa subs... 50.7 3e-05
sp|Q64279|HAND1_MOUSE Heart- and neural crest derivatives-express... 49.1 3e-05
sp|Q5PPM5|HES1_XENTR Transcription factor HES-1 OS=Xenopus tropic... 49.9 3e-05
sp|Q01070|ESMC_DROME Enhancer of split mgamma protein OS=Drosophi... 48.7 3e-05
sp|Q14582|MAD4_HUMAN Max dimerization protein 4 OS=Homo sapiens O... 49.1 3e-05
sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis ... 50.7 3e-05
sp|Q8S3D5|LRL2_ARATH Transcription factor LRL2 OS=Arabidopsis tha... 49.9 4e-05
sp|Q01664|TFAP4_HUMAN Transcription factor AP-4 OS=Homo sapiens O... 49.9 4e-05
sp|Q9UUD1|SREBP_SCHPO Sterol regulatory element-binding protein 1... 50.7 4e-05
sp|Q8AVU4|HES1B_XENLA Transcription factor HES-1-B OS=Xenopus lae... 49.1 4e-05
sp|Q2QQ32|BH133_ORYSJ Transcription factor BHLH133 OS=Oryza sativ... 48.4 4e-05
sp|Q8IV76|PASD1_HUMAN Circadian clock protein PASD1 OS=Homo sapie... 50.3 4e-05
sp|P27792|LYL1_MOUSE Protein lyl-1 OS=Mus musculus OX=10090 GN=Ly... 49.1 5e-05
sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis ... 49.1 5e-05
sp|P35429|HES2_RAT Transcription factor HES-2 OS=Rattus norvegicu... 47.6 5e-05
sp|P14003|HAIR_DROME Protein hairy OS=Drosophila melanogaster OX=... 49.5 5e-05
sp|Q9ZVB5|BH100_ARATH Transcription factor bHLH100 OS=Arabidopsis... 48.7 5e-05
sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis ... 49.5 5e-05
sp|Q6IRB2|HES1A_XENLA Transcription factor HES-1-A OS=Xenopus lae... 49.1 5e-05
sp|P50538|MAD1_MOUSE Max dimerization protein 1 OS=Mus musculus O... 48.7 5e-05
sp|P29303|HAIR_DROVI Protein hairy OS=Drosophila virilis OX=7244 ... 49.5 6e-05
sp|Q9NX45|SOLH2_HUMAN Spermatogenesis- and oogenesis-specific bas... 49.5 6e-05
sp|Q66HH3|LYL1_RAT Protein lyl-1 OS=Rattus norvegicus OX=10116 GN... 49.1 6e-05
sp|Q9ZPW3|HBI1_ARATH Transcription factor HBI1 OS=Arabidopsis tha... 49.1 6e-05
sp|Q90Z12|HES4A_XENLA Transcription factor HES-4-A OS=Xenopus lae... 48.7 7e-05
sp|Q5TGS1|HES3_HUMAN Transcription factor HES-3 OS=Homo sapiens O... 47.6 7e-05
sp|P13098|ESM8_DROME Enhancer of split m8 protein OS=Drosophila m... 47.6 7e-05
sp|Q6PBD4|HES4_XENTR Transcription factor HES-4 OS=Xenopus tropic... 48.7 7e-05
sp|Q18711|MXL3_CAEEL Protein mxl-3 OS=Caenorhabditis elegans OX=6... 48.4 8e-05
sp|Q90VV1|HES4B_XENLA Transcription factor HES-4-B OS=Xenopus lae... 48.4 8e-05
sp|Q96HZ4|HES6_HUMAN Transcription cofactor HES-6 OS=Homo sapiens... 48.0 8e-05
sp|Q9M1K1|ORG2_ARATH Transcription factor ORG2 OS=Arabidopsis tha... 48.4 8e-05
sp|Q61657|HES3_MOUSE Transcription factor HES-3 OS=Mus musculus O... 47.2 9e-05
sp|P57101|HAND2_XENLA Heart- and neural crest derivatives-express... 47.6 9e-05
sp|G5EF76|LIN22_CAEEL Helix-loop-helix protein lin-22 OS=Caenorha... 46.8 9e-05
sp|Q01069|ESMB_DROME Enhancer of split mbeta protein OS=Drosophil... 47.2 9e-05
sp|O08789|MNT_MOUSE Max-binding protein MNT OS=Mus musculus OX=10... 49.1 1e-04
sp|Q56YJ8|FAMA_ARATH Transcription factor FAMA OS=Arabidopsis tha... 48.7 1e-04
sp|O81313|IND_ARATH Transcription factor IND OS=Arabidopsis thali... 47.2 1e-04
sp|Q99583|MNT_HUMAN Max-binding protein MNT OS=Homo sapiens OX=96... 49.1 1e-04
sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis ... 48.0 1e-04
sp|B8AH97|BCL2_ORYSI Basic helix-loop-helix protein 79 OS=Oryza s... 48.4 1e-04
sp|D0PX88|RHL1_LOTJA bHLH transcription factor RHL1 OS=Lotus japo... 48.7 1e-04
sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis ... 48.7 1e-04
sp|Q04635|ESC1_SCHPO Protein esc1 OS=Schizosaccharomyces pombe (s... 48.7 1e-04
sp|Q9M128|BH057_ARATH Transcription factor bHLH57 OS=Arabidopsis ... 48.4 1e-04
sp|Q07291|ESM8_DROHY Enhancer of split m8 protein OS=Drosophila h... 46.8 1e-04
sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis ... 48.0 1e-04
sp|Q6Z2G7|BCL2_ORYSJ Basic helix-loop-helix protein 79 OS=Oryza s... 48.4 1e-04
sp|Q9JHE6|HES6_MOUSE Transcription cofactor HES-6 OS=Mus musculus... 47.2 1e-04
sp|Q9LQ08|BH125_ARATH Transcription factor bHLH125 OS=Arabidopsis... 47.6 1e-04
sp|Q12398|HMS1_YEAST Probable transcription factor HMS1 OS=Saccha... 48.4 1e-04
sp|P57102|HAND2_DANRE Heart- and neural crest derivatives-express... 47.2 1e-04
sp|Q22717|HLH3_CAEEL Helix-loop-helix protein 3 OS=Caenorhabditis... 46.4 1e-04
sp|Q93VJ4|BEE2_ARATH Transcription factor BEE 2 OS=Arabidopsis th... 48.0 1e-04
sp|Q9ZUG9|LRL1_ARATH Transcription factor LRL1 OS=Arabidopsis tha... 48.0 1e-04
sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis ... 47.6 1e-04
sp|P70562|BHA15_RAT Class A basic helix-loop-helix protein 15 OS=... 46.8 1e-04
sp|O54792|HES2_MOUSE Transcription factor HES-2 OS=Mus musculus O... 46.1 2e-04
sp|Q9PSI9|MCL1A_DANRE Protein L-Myc-1a OS=Danio rerio OX=7955 GN=... 48.0 2e-04
sp|Q10574|LIN32_CAEEL Protein lin-32 OS=Caenorhabditis elegans OX... 45.7 2e-04
sp|Q9Y543|HES2_HUMAN Transcription factor HES-2 OS=Homo sapiens O... 46.4 2e-04
sp|P61295|HAND2_RAT Heart- and neural crest derivatives-expressed... 47.2 2e-04
sp|Q61039|HAND2_MOUSE Heart- and neural crest derivatives-express... 47.2 2e-04
sp|P61296|HAND2_HUMAN Heart- and neural crest derivatives-express... 47.2 2e-04
sp|P52164|MAX_RAT Protein max OS=Rattus norvegicus OX=10116 GN=Ma... 46.1 2e-04
sp|Q9FXA3|BH095_ARATH Transcription factor bHLH95 OS=Arabidopsis ... 47.6 2e-04
sp|Q6SYV5|MYF6_TAKRU Myogenic factor 6 OS=Takifugu rubripes OX=31... 47.2 2e-04
sp|Q700E4|BH067_ARATH Transcription factor bHLH67 OS=Arabidopsis ... 48.0 2e-04
sp|Q02576|HEN1_MOUSE Helix-loop-helix protein 1 OS=Mus musculus O... 45.3 2e-04
sp|Q8LEG1|RSL4_ARATH Transcription factor RSL3 OS=Arabidopsis tha... 47.2 2e-04
sp|Q6PUV5|MYF6_TETNG Myogenic factor 6 OS=Tetraodon nigroviridis ... 46.8 2e-04
sp|Q0VH32|MNT_XENLA Max-binding protein MNT OS=Xenopus laevis OX=... 48.4 2e-04
sp|Q02575|HEN1_HUMAN Helix-loop-helix protein 1 OS=Homo sapiens O... 45.3 2e-04
sp|P28574|MAX_MOUSE Protein max OS=Mus musculus OX=10090 GN=Max P... 45.7 2e-04
sp|P52162|MAX_CHICK Protein max OS=Gallus gallus OX=9031 GN=MAX P... 45.7 2e-04
sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis tha... 48.0 2e-04
sp|Q05404|MCL1A_XENLA Protein L-Myc-1-A OS=Xenopus laevis OX=8355... 47.6 2e-04
sp|Q90691|HAND1_CHICK Heart- and neural crest derivatives-express... 46.4 2e-04
sp|Q90690|HAND2_CHICK Heart- and neural crest derivatives-express... 46.4 3e-04
sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis... 46.4 3e-04
sp|A4D998|BH075_ARATH Transcription factor bHLH75 OS=Arabidopsis ... 46.4 3e-04
sp|Q04667|HES3_RAT Transcription factor HES-3 OS=Rattus norvegicu... 45.7 3e-04
sp|P61244|MAX_HUMAN Protein max OS=Homo sapiens OX=9606 GN=MAX PE... 45.3 3e-04
sp|P61245|MAX_FELCA Protein max OS=Felis catus OX=9685 GN=MAX PE=... 45.3 3e-04
sp|Q18277|HLH12_CAEEL Helix-loop-helix protein hlh-12 OS=Caenorha... 45.3 3e-04
sp|Q9QYC3|BHA15_MOUSE Class A basic helix-loop-helix protein 15 O... 46.1 3e-04
sp|Q8THF6|MSMS_METAC Methyl sulfide methyltransferase-associated ... 48.0 3e-04
sp|O57598|ATOH7_CHICK Transcription factor ATOH7 OS=Gallus gallus... 44.9 3e-04
sp|P12980|LYL1_HUMAN Protein lyl-1 OS=Homo sapiens OX=9606 GN=LYL... 46.8 3e-04
sp|P23409|MYF6_HUMAN Myogenic factor 6 OS=Homo sapiens OX=9606 GN... 46.4 3e-04
sp|Q5ADL8|TRY6_CANAL Transcriptional regulator of yeast form adhe... 47.2 3e-04
sp|Q9BW11|MAD3_HUMAN Max dimerization protein 3 OS=Homo sapiens O... 46.1 3e-04
sp|Q01795|MYF6_CHICK Myogenic factor 6 OS=Gallus gallus OX=9031 G... 46.4 3e-04
sp|Q7RTS1|BHA15_HUMAN Class A basic helix-loop-helix protein 15 O... 45.7 3e-04
sp|Q91206|MYOD2_ONCMY Myoblast determination protein 1 homolog 2 ... 46.4 4e-04
sp|P15375|MYF6_MOUSE Myogenic factor 6 OS=Mus musculus OX=10090 G... 46.1 4e-04
sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis... 47.2 4e-04
sp|Q9LND0|BH089_ARATH Transcription factor bHLH89 OS=Arabidopsis ... 46.8 4e-04
sp|Q92020|MYF6_XENLA Myogenic factor 6 OS=Xenopus laevis OX=8355 ... 46.1 4e-04
sp|Q18590|HLH15_CAEEL Helix-loop-helix protein 15 OS=Caenorhabdit... 43.0 4e-04
sp|Q7YS80|MYF6_BOVIN Myogenic factor 6 OS=Bos taurus OX=9913 GN=M... 46.1 4e-04
sp|Q84WK0|RSL2_ARATH Transcription factor RSL2 OS=Arabidopsis tha... 46.8 4e-04
sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis ... 46.4 4e-04
sp|Q18612|HND1_CAEEL Hand transcription factor 1 OS=Caenorhabditi... 45.7 4e-04
sp|Q8NDY6|BHE23_HUMAN Class E basic helix-loop-helix protein 23 O... 45.7 4e-04
sp|Q7SX95|MAD3_DANRE Max dimerization protein 3 OS=Danio rerio OX... 45.3 5e-04
sp|P24700|MYF5_XENLA Myogenic factor 5 OS=Xenopus laevis OX=8355 ... 46.1 5e-04
sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis ... 46.8 5e-04
sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis ... 46.8 5e-04
sp|O81037|BH070_ARATH Transcription factor bHLH70 OS=Arabidopsis ... 46.4 6e-04
sp|P19335|MYF6_RAT Myogenic factor 6 OS=Rattus norvegicus OX=1011... 45.7 6e-04
sp|Q3YFL6|MYF6_PIG Myogenic factor 6 OS=Sus scrofa OX=9823 GN=MYF... 45.7 6e-04
sp|P98091|MUC19_BOVIN Mucin-19 OS=Bos taurus OX=9913 GN=MUC19 PE=... 46.8 7e-04
sp|Q60948|MAD4_MOUSE Max dimerization protein 4 OS=Mus musculus O... 44.9 7e-04
sp|P17542|TAL1_HUMAN T-cell acute lymphocytic leukemia protein 1 ... 45.7 8e-04
sp|Q8UW72|HE71B_XENLA Transcription factor HES-7.1-B OS=Xenopus l... 44.1 9e-04
sp|Q6VNZ9|MYF6_DANRE Myogenic factor 6 OS=Danio rerio OX=7955 GN=... 44.9 9e-04
sp|Q8UW74|HE71A_XENLA Transcription factor HES-7.1-A OS=Xenopus l... 44.1 9e-04
sp|P41894|DEI_DROME Helix-loop-helix protein delilah OS=Drosophil... 45.7 0.001
sp|P24899|TAL1_CHICK T-cell acute lymphocytic leukemia protein 1 ... 45.3 0.001
sp|P79782|TCF15_CHICK Transcription factor 15 OS=Gallus gallus OX... 44.1 0.001
sp|P52161|MAX_DANRE Protein max OS=Danio rerio OX=7955 GN=max PE=... 43.7 0.001
sp|Q9Z304|MYCS_MOUSE Protein S-Myc OS=Mus musculus OX=10090 GN=My... 45.7 0.001
sp|Q7RTU7|SCX_HUMAN Basic helix-loop-helix transcription factor s... 44.1 0.001
sp|O73823|TAL1_XENLA T-cell acute lymphocytic leukemia protein 1 ... 45.3 0.001
sp|Q8H102|BH128_ARATH Transcription factor bHLH128 OS=Arabidopsis... 45.3 0.001
sp|Q3EAI1|BH060_ARATH Transcription factor bHLH60 OS=Arabidopsis ... 45.3 0.001
sp|P10083|AST5_DROME Achaete-scute complex protein T5 OS=Drosophi... 44.1 0.001
sp|P22091|TAL1_MOUSE T-cell acute lymphocytic leukemia protein 1 ... 44.9 0.001
sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis ... 45.3 0.001
sp|Q9M1K0|ORG3_ARATH Transcription factor ORG3 OS=Arabidopsis tha... 44.5 0.002
sp|Q9C690|BH122_ARATH Transcription factor bHLH122 OS=Arabidopsis... 44.9 0.002
sp|Q8L467|BH104_ARATH Transcription factor bHLH104 OS=Arabidopsis... 44.5 0.002
sp|Q9M041|BH140_ARATH Transcription factor bHLH140 OS=Arabidopsis... 45.7 0.002
sp|A2T713|TFEC_PANTR Transcription factor EC OS=Pan troglodytes O... 44.9 0.002
sp|A2T7L8|TFEC_PONPY Transcription factor EC OS=Pongo pygmaeus OX... 44.5 0.002
sp|O14948|TFEC_HUMAN Transcription factor EC OS=Homo sapiens OX=9... 44.5 0.002
sp|P15173|MYOG_HUMAN Myogenin OS=Homo sapiens OX=9606 GN=MYOG PE=... 43.7 0.002
sp|Q9SK91|BH094_ARATH Transcription factor bHLH94 OS=Arabidopsis ... 44.5 0.002
sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis ... 44.9 0.002
sp|Q96RG2|PASK_HUMAN PAS domain-containing serine/threonine-prote... 45.3 0.002
sp|Q8GWK7|BEE3_ARATH Transcription factor BEE 3 OS=Arabidopsis th... 44.1 0.002
sp|Q9C707|RHD6_ARATH Transcription factor RHD6 OS=Arabidopsis tha... 44.1 0.002
sp|Q96SQ7|ATOH8_HUMAN Transcription factor ATOH8 OS=Homo sapiens ... 44.5 0.002
sp|Q8GZ13|BEE1_ARATH Transcription factor BEE 1 OS=Arabidopsis th... 44.1 0.002
sp|Q68DE3|USF3_HUMAN Basic helix-loop-helix domain-containing pro... 44.9 0.002
sp|Q64221|HEN2_MOUSE Helix-loop-helix protein 2 OS=Mus musculus O... 41.8 0.003
sp|Q02577|HEN2_HUMAN Helix-loop-helix protein 2 OS=Homo sapiens O... 41.8 0.003
sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis ... 43.7 0.003
sp|Q0V9X5|BHE22_XENTR Class E basic helix-loop-helix protein 22 O... 43.7 0.003
sp|Q7XAQ6|LAX1_ORYSJ Transcription factor LAX PANICLE 1 OS=Oryza ... 43.0 0.003
sp|P12979|MYOG_MOUSE Myogenin OS=Mus musculus OX=10090 GN=Myog PE... 43.4 0.003
sp|Q700C7|SPCH_ARATH Transcription factor SPEECHLESS OS=Arabidops... 43.7 0.003
sp|A0A0P0WQ90|LF_ORYSJ Transcription factor LATE FLOWERING OS=Ory... 44.1 0.003
sp|Q0WNR2|BH090_ARATH Transcription factor bHLH90 OS=Arabidopsis ... 44.1 0.003
sp|Q9FJ00|RSL1_ARATH Putative transcription factor bHLH086 OS=Ara... 43.7 0.003
sp|P01110|MYC_AVIMC Viral myc transforming protein OS=Avian myelo... 43.7 0.004
sp|Q9ZW81|BH129_ARATH Transcription factor bHLH129 OS=Arabidopsis... 43.4 0.004
sp|Q9GNV2|TWIST_PODCA Twist-related protein OS=Podocoryna carnea ... 42.6 0.004
sp|P06295|MYC_AVIMD Viral myc transforming protein OS=Avian myelo... 43.7 0.004
sp|Q66GR3|BH130_ARATH Transcription factor bHLH130 OS=Arabidopsis... 43.7 0.004
sp|Q0JFZ0|IRO2_ORYSJ Protein IRON-RELATED TRANSCRIPTION FACTOR 2 ... 43.0 0.004
sp|Q9STJ7|BH118_ARATH Transcription factor bHLH118 OS=Arabidopsis... 42.2 0.004
sp|Q9CA64|PRE3_ARATH Transcription factor PRE3 OS=Arabidopsis tha... 40.3 0.004
sp|P55552|Y4LL_SINFN Uncharacterized protein y4lL OS=Sinorhizobiu... 44.1 0.004
sp|D2CLZ9|ATOH8_DANRE Transcription factor atoh8 OS=Danio rerio O... 43.4 0.004
sp|Q99NA2|ATOH8_MOUSE Transcription factor Atoh8 OS=Mus musculus ... 43.4 0.004
sp|A1YG22|MYC_PANPA Myc proto-oncogene protein OS=Pan paniscus OX... 43.7 0.004
sp|Q95XG7|NGN1_CAEEL Helix-loop-helix protein ngn-1 OS=Caenorhabd... 42.2 0.004
sp|P23583|MYC_PANTR Myc proto-oncogene protein OS=Pan troglodytes... 43.7 0.004
sp|A4IFU7|TFEC_BOVIN Transcription factor EC OS=Bos taurus OX=991... 43.4 0.005
sp|Q09961|HLH14_CAEEL Helix-loop-helix protein 14 OS=Caenorhabdit... 41.4 0.005
sp|P17920|MYOG_CHICK Myogenin OS=Gallus gallus OX=9031 GN=MYOG PE... 42.6 0.005
sp|A2WZ60|IRO2_ORYSI Protein IRON-RELATED TRANSCRIPTION FACTOR 2 ... 43.0 0.005
sp|Q8J1X7|FUSC3_FUSCU Allergen Fus c 3 OS=Fusarium culmorum OX=55... 43.4 0.005
sp|Q07016|MAX_XENLA Protein max OS=Xenopus laevis OX=8355 GN=max ... 41.8 0.005
sp|P49033|MYC_HYLLA Myc proto-oncogene protein OS=Hylobates lar O... 43.4 0.005
sp|P23999|MYCS_RAT Protein S-Myc OS=Rattus norvegicus OX=10116 GN... 43.4 0.005
sp|Q9WTW4|TFEC_MOUSE Transcription factor EC OS=Mus musculus OX=1... 43.0 0.005
sp|P06171|MYC1_XENLA Transcriptional regulator Myc-A OS=Xenopus l... 43.0 0.006
sp|Q15784|NDF2_HUMAN Neurogenic differentiation factor 2 OS=Homo ... 43.0 0.006
sp|P01109|MYC_CHICK Myc proto-oncogene protein OS=Gallus gallus O... 43.0 0.006
sp|Q91154|MYF5_NOTVI Myogenic factor 5 OS=Notophthalmus viridesce... 42.6 0.006
sp|Q80US8|MAD3_MOUSE Max dimerization protein 3 OS=Mus musculus O... 42.2 0.006
sp|P33122|TYE7_YEAST Transcription factor TYE7 OS=Saccharomyces c... 42.6 0.006
sp|P59101|SCX_CHICK Basic helix-loop-helix transcription factor s... 41.8 0.007
sp|Q64210|MYC2_OTOBE N-myc 2 proto-oncogene protein OS=Otospermop... 43.0 0.007
sp|Q62414|NDF2_MOUSE Neurogenic differentiation factor 2 OS=Mus m... 43.0 0.007
sp|Q90YI8|TAL1_TAKRU T-cell acute lymphocytic leukemia protein 1 ... 43.0 0.007
sp|P70447|NGN2_MOUSE Neurogenin-2 OS=Mus musculus OX=10090 GN=Neu... 42.6 0.007
sp|Q7X8R0|EAT1_ORYSJ Transcription factor EAT1 OS=Oryza sativa su... 43.0 0.007
sp|O93507|TAL1_DANRE T-cell acute lymphocytic leukemia protein 1 ... 42.6 0.007
sp|Q16559|TAL2_HUMAN T-cell acute lymphocytic leukemia protein 2 ... 40.3 0.007
sp|P0C0N8|MYC_AVIME Viral myc transforming protein OS=Avian retro... 43.0 0.007
sp|P20389|MYC2_MARMO N-myc 2 proto-oncogene protein OS=Marmota mo... 43.0 0.007
sp|Q9FYE6|BH101_ARATH Transcription factor bHLH101 OS=Arabidopsis... 42.2 0.007
sp|Q63689|NDF2_RAT Neurogenic differentiation factor 2 OS=Rattus ... 43.0 0.007
sp|Q00858|CGPB_FUSVN Cutinase gene palindrome-binding protein OS=... 43.0 0.007
sp|Q9LTC7|BH034_ARATH Transcription factor bHLH34 OS=Arabidopsis ... 42.6 0.007
sp|P01106|MYC_HUMAN Myc proto-oncogene protein OS=Homo sapiens OX... 43.0 0.008
sp|P10395|MYC_AVIM2 Viral myc transforming protein OS=Avian myelo... 43.0 0.008
sp|G5EG44|MDL1_CAEEL Mad-like protein 1 OS=Caenorhabditis elegans... 42.6 0.008
sp|Q63302|TFEC_RAT Transcription factor EC OS=Rattus norvegicus O... 42.6 0.008
sp|Q5AL36|TYE7_CANAL Carbohydrate metabolism regulator TYE7 OS=Ca... 42.2 0.008
sp|Q62912|MAD3_RAT Max dimerization protein 3 OS=Rattus norvegicu... 41.8 0.008
sp|P97831|TWST2_RAT Twist-related protein 2 OS=Rattus norvegicus ... 41.0 0.008
sp|Q8WVJ9|TWST2_HUMAN Twist-related protein 2 OS=Homo sapiens OX=... 41.0 0.008
sp|P01108|MYC_MOUSE Myc proto-oncogene protein OS=Mus musculus OX... 43.0 0.008
sp|Q5XFQ6|TFEC_CHICK Transcription factor EC OS=Gallus gallus OX=... 42.6 0.008
sp|Q60539|TCF15_MESAU Transcription factor 15 OS=Mesocricetus aur... 41.4 0.008
sp|Q9FLI0|BH120_ARATH Transcription factor bHLH120 OS=Arabidopsis... 41.8 0.008
sp|O96642|TWIST_BRABE Twist-related protein OS=Branchiostoma belc... 41.4 0.008
sp|P79766|NDF4_CHICK Neurogenic differentiation factor 4 OS=Gallu... 42.6 0.009
sp|Q9S7Y1|BH030_ARATH Transcription factor bHLH30 OS=Arabidopsis ... 42.6 0.009
sp|Q9D030|TWST2_MOUSE Twist-related protein 2 OS=Mus musculus OX=... 41.0 0.009
sp|B8XIA5|MYC_MACMU Myc proto-oncogene protein OS=Macaca mulatta ... 42.6 0.009
sp|P46581|NDF1_CAEEL Neurogenic differentiation factor 1 OS=Caeno... 41.4 0.009
sp|Q71T09|BHE22_CHICK Class E basic helix-loop-helix protein 22 O... 42.2 0.009
sp|Q923Z4|FER3L_MOUSE Fer3-like protein OS=Mus musculus OX=10090 ... 41.0 0.009
sp|P49032|MYC_CALJA Myc proto-oncogene protein OS=Callithrix jacc... 42.6 0.009
sp|Q60756|TCF15_MOUSE Transcription factor 15 OS=Mus musculus OX=... 41.4 0.010
sp|Q9W6C7|NDF6B_DANRE Neurogenic differentiation factor 6-B OS=Da... 42.2 0.010
sp|Q9C682|BH115_ARATH Transcription factor bHLH115 OS=Arabidopsis... 41.4 0.011
sp|Q11094|TWIST_CAEEL Twist-related protein OS=Caenorhabditis ele... 41.0 0.011
sp|Q92858|ATOH1_HUMAN Transcription factor ATOH1 OS=Homo sapiens ... 42.2 0.011
sp|P0C0N9|MYC_AVIMH Viral myc transforming protein OS=Avian retro... 42.2 0.011
sp|Q7ZVS9|MYCB_DANRE Transcriptional regulator Myc-B OS=Danio rer... 42.2 0.011
sp|A2T7L5|MYC_PONPY Myc proto-oncogene protein OS=Pongo pygmaeus ... 42.2 0.011
sp|Q7ZSX3|PTF1A_DANRE Pancreas transcription factor 1 subunit alp... 41.8 0.011
sp|Q62282|TAL2_MOUSE T-cell acute lymphocytic leukemia protein 2 ... 39.5 0.011
sp|Q91205|MYOD1_ONCMY Myoblast determination protein 1 homolog 1 ... 41.8 0.012
sp|P09416|MYC_RAT Myc proto-oncogene protein OS=Rattus norvegicus... 42.2 0.012
sp|P49812|MYOG_PIG Myogenin OS=Sus scrofa OX=9823 GN=MYOG PE=3 SV=1 41.4 0.012
sp|Q5IS79|ATOH1_PANTR Transcription factor ATOH1 OS=Pan troglodyt... 42.2 0.012
sp|P48987|ATO_DROME Protein atonal OS=Drosophila melanogaster OX=... 41.8 0.012
sp|Q12870|TCF15_HUMAN Transcription factor 15 OS=Homo sapiens OX=... 41.0 0.012
sp|P48986|NDF6_MOUSE Neurogenic differentiation factor 6 OS=Mus m... 41.8 0.012
sp|O45489|HLH17_CAEEL Helix-loop-helix protein 17 OS=Caenorhabdit... 39.1 0.013
sp|P49709|MYC_CARAU Transcriptional regulator Myc OS=Carassius au... 42.2 0.013
sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis ... 42.2 0.013
sp|A2AAJ9|OBSCN_MOUSE Obscurin OS=Mus musculus OX=10090 GN=Obscn ... 42.6 0.013
sp|Q08DI0|NDF6_BOVIN Neurogenic differentiation factor 6 OS=Bos t... 41.8 0.013
sp|Q4R5G6|NDF6_MACFA Neurogenic differentiation factor 6 OS=Macac... 41.8 0.014
sp|Q96NK8|NDF6_HUMAN Neurogenic differentiation factor 6 OS=Homo ... 41.8 0.014
sp|P12524|MYCL_HUMAN Protein L-Myc OS=Homo sapiens OX=9606 GN=MYC... 41.8 0.014
sp|Q2R1J3|ILI2_ORYSJ Transcription factor ILI2 OS=Oryza sativa su... 39.1 0.014
sp|B8BLA3|ILI2_ORYSI Transcription factor ILI2 OS=Oryza sativa su... 39.1 0.014
sp|Q00492|SUM1_LYTVA Transcription factor SUM-1 OS=Lytechinus var... 41.4 0.014
sp|P12523|MYC_AVIOK Viral myc transforming protein OS=Avian retro... 41.8 0.015
sp|Q05195|MAD1_HUMAN Max dimerization protein 1 OS=Homo sapiens O... 41.0 0.015
sp|Q9MZT9|MYC_TUPGL Myc proto-oncogene protein OS=Tupaia glis OX=... 41.8 0.015
sp|Q9MZU0|MYC_GALVR Myc proto-oncogene protein OS=Galeopterus var... 41.8 0.015
sp|Q64124|SCX_MOUSE Basic helix-loop-helix transcription factor s... 41.0 0.015
sp|Q28566|MYC_SHEEP Myc proto-oncogene protein OS=Ovis aries OX=9... 41.8 0.016
sp|Q8AW52|ATOH7_DANRE Transcription factor atoh7 OS=Danio rerio O... 39.5 0.016
sp|P06646|MYC_ONCMY Transcriptional regulator Myc (Fragment) OS=O... 41.8 0.016
sp|P50539|MXI1_HUMAN Max-interacting protein 1 OS=Homo sapiens OX... 41.0 0.016
sp|Q90477|MYOD1_DANRE Myoblast determination protein 1 homolog OS... 41.4 0.017
sp|P20428|MYOG_RAT Myogenin OS=Rattus norvegicus OX=10116 GN=Myog... 41.4 0.017
sp|Q9UL49|TCFL5_HUMAN Transcription factor-like 5 protein OS=Homo... 41.8 0.017
sp|P10166|MYCL_MOUSE Protein L-Myc OS=Mus musculus OX=10090 GN=My... 41.8 0.017
sp|Q8VIP2|MLXPL_RAT Carbohydrate-responsive element-binding prote... 42.2 0.017
sp|Q2HJ27|MYC_BOVIN Myc proto-oncogene protein OS=Bos taurus OX=9... 41.8 0.017
sp|Q9W6C8|NDF2_DANRE Neurogenic differentiation factor 2 OS=Danio... 41.4 0.017
sp|P18444|MYCN_CHICK N-myc proto-oncogene protein OS=Gallus gallu... 41.8 0.017
sp|P48985|ATOH1_MOUSE Transcription factor Atoh1 OS=Mus musculus ... 41.4 0.017
sp|Q99MZ3|MLXPL_MOUSE Carbohydrate-responsive element-binding pro... 42.2 0.018
sp|Q90341|MYC1_CYPCA Transcriptional regulator Myc-1 OS=Cyprinus ... 41.4 0.018
sp|Q9LS08|BH032_ARATH Transcription factor AIG1 OS=Arabidopsis th... 41.4 0.018
sp|Q9FIX5|BH092_ARATH Transcription factor bHLH92 OS=Arabidopsis ... 41.0 0.018
sp|P68272|MYC_FLV Viral myc transforming protein OS=Feline leukem... 41.8 0.018
sp|P68271|MYC_FELCA Myc proto-oncogene protein OS=Felis catus OX=... 41.8 0.018
sp|P15939|NODV_BRADU Nodulation protein V OS=Bradyrhizobium diazo... 41.8 0.019
sp|Q56XR0|BH071_ARATH Transcription factor bHLH71 OS=Arabidopsis ... 41.4 0.019
sp|Q7YS81|MYOG_BOVIN Myogenin OS=Bos taurus OX=9913 GN=MYOG PE=2 ... 40.7 0.019
sp|Q9TZ70|MXL2_CAEEL Max-like protein homolog 2 OS=Caenorhabditis... 40.7 0.020
sp|Q9MZT7|MYC_TADBR Myc proto-oncogene protein OS=Tadarida brasil... 41.4 0.020
sp|Q61976|MYCN_MARMO N-myc proto-oncogene protein OS=Marmota mona... 41.4 0.020
sp|Q6NYU3|NDF6A_DANRE Neurogenic differentiation factor 6-A OS=Da... 41.4 0.021
sp|O09015|MXI1_RAT Max-interacting protein 1 OS=Rattus norvegicus... 40.7 0.021
sp|Q28350|MYC_CANLF Myc proto-oncogene protein OS=Canis lupus fam... 41.4 0.021
sp|Q4ZHW1|PTF1A_XENLA Pancreas transcription factor 1 subunit alp... 41.0 0.022
sp|P79765|NDF1_CHICK Neurogenic differentiation factor 1 OS=Gallu... 41.4 0.022
sp|P50540|MXI1_MOUSE Max-interacting protein 1 OS=Mus musculus OX... 40.7 0.022
sp|Q9HD90|NDF4_HUMAN Neurogenic differentiation factor 4 OS=Homo ... 41.0 0.022
sp|Q7RTU3|OLIG3_HUMAN Oligodendrocyte transcription factor 3 OS=H... 41.0 0.022
sp|P13903|TWIST_XENLA Twist-related protein OS=Xenopus laevis OX=... 39.9 0.022
sp|P22555|MYC_MARMO Myc proto-oncogene protein OS=Marmota monax O... 41.4 0.023
sp|Q9MZT8|MYC_PTEHP Myc proto-oncogene protein OS=Pteropus hypome... 41.4 0.023
sp|Q9TX44|TWIST_DROVI Protein twist OS=Drosophila virilis OX=7244... 41.4 0.023
sp|Q8BGW3|BHE23_MOUSE Class E basic helix-loop-helix protein 23 O... 40.7 0.023
sp|P34474|HLH11_CAEEL Helix-loop-helix protein 11 OS=Caenorhabdit... 41.4 0.024
sp|Q1LWL8|MCL1B_DANRE Protein L-Myc-1b OS=Danio rerio OX=7955 GN=... 41.0 0.025
sp|Q8KIY1|TMOS_PSEME Sensor histidine kinase TmoS OS=Pseudomonas ... 41.4 0.025
sp|Q8C6A8|BHE22_MOUSE Class E basic helix-loop-helix protein 22 O... 41.0 0.025
sp|Q6PFG8|OLIG3_MOUSE Oligodendrocyte transcription factor 3 OS=M... 40.7 0.025
sp|Q6GNB7|TCF21_XENLA Transcription factor 21 OS=Xenopus laevis O... 39.9 0.026
sp|O13126|ATO7B_XENLA Transcription factor Atoh7-b OS=Xenopus lae... 39.1 0.026
sp|Q9XX00|SRBPH_CAEEL Sterol regulatory element binding protein s... 41.4 0.026
sp|O09029|BHE22_MESAU Class E basic helix-loop-helix protein 22 O... 41.0 0.026
sp|B0XU60|DEVR_ASPFC Basic helix-loop-helix transcription factor ... 41.4 0.026
sp|F4I4E1|BH167_ARATH Transcription factor bHLH167 OS=Arabidopsis... 39.9 0.027
sp|Q4W9W8|SRBB_ASPFU Transcription factor srbB OS=Aspergillus fum... 40.7 0.028
sp|Q90ZL1|MSGN1_DANRE Mesogenin-1 OS=Danio rerio OX=7955 GN=msgn1... 38.7 0.029
sp|P04198|MYCN_HUMAN N-myc proto-oncogene protein OS=Homo sapiens... 41.0 0.029
sp|Q9MZT6|MYC_SYLFL Myc proto-oncogene protein OS=Sylvilagus flor... 41.0 0.031
sp|Q9Y613|FHOD1_HUMAN FH1/FH2 domain-containing protein 1 OS=Homo... 41.4 0.031
sp|Q9FLI1|BH036_ARATH Transcription factor bHLH36 OS=Arabidopsis ... 39.5 0.031
sp|Q6Q2A8|MYOD1_TAKRU Myoblast determination protein 1 homolog OS... 40.7 0.033
sp|Q9W4S7|MYC_DROME Myc protein OS=Drosophila melanogaster OX=722... 41.0 0.034
sp|P03966|MYCN_MOUSE N-myc proto-oncogene protein OS=Mus musculus... 41.0 0.034
sp|Q6QHK4|FIGLA_HUMAN Factor in the germline alpha OS=Homo sapien... 39.9 0.034
sp|A8E5T6|TCF21_XENTR Transcription factor 21 OS=Xenopus tropical... 39.5 0.034
sp|Q7X742|ILI1_ORYSJ Transcription factor ILI1 OS=Oryza sativa su... 38.0 0.034
sp|A2XY47|ILI1_ORYSI Transcription factor ILI1 OS=Oryza sativa su... 38.0 0.034
sp|Q63379|MYCN_RAT N-myc proto-oncogene protein OS=Rattus norvegi... 40.7 0.034
sp|Q9H2A3|NGN2_HUMAN Neurogenin-2 OS=Homo sapiens OX=9606 GN=NEUR... 40.3 0.034
sp|O09105|NDF4_MOUSE Neurogenic differentiation factor 4 OS=Mus m... 40.7 0.037
sp|Q3UPL0|SC31A_MOUSE Protein transport protein Sec31A OS=Mus mus... 41.0 0.038
sp|Q6XD76|ASCL4_HUMAN Achaete-scute homolog 4 OS=Homo sapiens OX=... 39.1 0.039
sp|Q0VFI9|MAD1_XENTR Max dimerization protein 1 OS=Xenopus tropic... 39.9 0.040
sp|Q8GW32|PRE6_ARATH Transcription factor PRE6 OS=Arabidopsis tha... 37.6 0.040
sp|Q96RJ6|FER3L_HUMAN Fer3-like protein OS=Homo sapiens OX=9606 G... 39.1 0.041
sp|Q9LT23|BH121_ARATH Transcription factor bHLH121 OS=Arabidopsis... 40.3 0.041
sp|P10627|TWIST_DROME Protein twist OS=Drosophila melanogaster OX... 40.7 0.043
sp|Q8I1G0|TWIST_DROER Protein twist OS=Drosophila erecta OX=7220 ... 40.7 0.043
sp|P13096|ESM5_DROME Enhancer of split m5 protein OS=Drosophila m... 39.1 0.046
sp|Q9NP71|MLXPL_HUMAN Carbohydrate-responsive element-binding pro... 40.7 0.046
sp|Q8NFJ8|BHE22_HUMAN Class E basic helix-loop-helix protein 22 O... 40.3 0.052
sp|Q9M8K6|MUTE_ARATH Transcription factor MUTE OS=Arabidopsis tha... 39.1 0.053
sp|O42202|NDF1_DANRE Neurogenic differentiation factor 1 OS=Danio... 39.9 0.054
sp|P24793|MYCN_XENLA N-myc protein OS=Xenopus laevis OX=8355 GN=m... 40.3 0.056
sp|Q10007|HLH6_CAEEL Helix-loop-helix protein 6 OS=Caenorhabditis... 39.5 0.057
sp|Q5JUK2|SOLH1_HUMAN Spermatogenesis- and oogenesis-specific bas... 39.9 0.058
sp|P20824|NUC1_NEUCR Phosphorus acquisition-controlling protein O... 40.3 0.061
sp|Q8LPD9|PHOT_CHLRE Phototropin OS=Chlamydomonas reinhardtii OX=... 40.3 0.063
sp|P52160|MYCA_DANRE Transcriptional regulator Myc-A OS=Danio rer... 39.9 0.066
sp|F4JCN9|PRE4_ARATH Transcription factor PRE4 OS=Arabidopsis tha... 36.8 0.066
sp|Q18034|NFX1_CAEEL Transcriptional repressor NF-X1 homolog OS=C... 40.3 0.069
sp|Q6YUX0|ILI5_ORYSJ Transcription factor ILI5 OS=Oryza sativa su... 36.8 0.070
sp|A2X9L8|ILI5_ORYSI Transcription factor ILI5 OS=Oryza sativa su... 36.8 0.070
sp|Q13562|NDF1_HUMAN Neurogenic differentiation factor 1 OS=Homo ... 39.5 0.071
sp|Q90342|MYC2_CYPCA Transcriptional regulator Myc-2 OS=Cyprinus ... 39.9 0.072
sp|Q8GT73|BH119_ARATH Transcription factor bHLH119 OS=Arabidopsis... 39.9 0.073
sp|Q20561|HLH13_CAEEL Helix-loop-helix protein 13 OS=Caenorhabdit... 38.0 0.073
sp|Q60867|NDF1_MOUSE Neurogenic differentiation factor 1 OS=Mus m... 39.5 0.075
sp|P50541|MXI1_DANRE Max-interacting protein 1 OS=Danio rerio OX=... 39.1 0.076
sp|Q8FW73|LOVHK_BRUSU Blue-light-activated histidine kinase OS=Br... 39.9 0.079
sp|A9WYQ7|LOVHK_BRUSI Blue-light-activated histidine kinase OS=Br... 39.9 0.079
sp|Q8YC53|LOVHK_BRUME Blue-light-activated histidine kinase OS=Br... 39.9 0.079
sp|A9MBM8|LOVHK_BRUC2 Blue-light-activated histidine kinase OS=Br... 39.9 0.079
sp|Q577Y7|LOVHK_BRUAB Blue-light-activated histidine kinase OS=Br... 39.9 0.079
sp|Q2YKK7|LOVHK_BRUA2 Blue-light-activated histidine kinase OS=Br... 39.9 0.079
sp|B2SB67|LOVHK_BRUA1 Blue-light-activated histidine kinase OS=Br... 39.9 0.079
sp|Q64289|NDF1_RAT Neurogenic differentiation factor 1 OS=Rattus ... 39.5 0.079
sp|Q0VH34|MAD1_XENLA Max dimerization protein 1 OS=Xenopus laevis... 38.7 0.080
sp|P15171|MYCB_XENLA Transcriptional regulator Myc-B OS=Xenopus l... 39.5 0.085
sp|Q9XIJ1|BH168_ARATH Transcription factor bHLH168 OS=Arabidopsis... 38.3 0.085
sp|Q9QX98|PTF1A_MOUSE Pancreas transcription factor 1 subunit alp... 39.1 0.085
sp|Q64305|PTF1A_RAT Pancreas transcription factor 1 subunit alpha... 39.1 0.086
sp|P41134|ID1_HUMAN DNA-binding protein inhibitor ID-1 OS=Homo sa... 38.0 0.090
sp|P41846|WBS14_CAEEL Protein WBSCR14 homolog OS=Caenorhabditis e... 39.9 0.093
sp|P22980|MYOD1_CAEEL Myoblast determination protein 1 homolog OS... 39.1 0.094
sp|P39101|CAJ1_YEAST Protein CAJ1 OS=Saccharomyces cerevisiae (st... 39.1 0.099
sp|Q5XVH0|BH109_ARATH Transcription factor bHLH109 OS=Arabidopsis... 38.3 0.099
sp|P11420|DA_DROME Protein daughterless OS=Drosophila melanogaste... 39.5 0.10
sp|P41135|ID1_RAT DNA-binding protein inhibitor ID-1 OS=Rattus no... 38.0 0.10
sp|P20067|ID1_MOUSE DNA-binding protein inhibitor ID-1 OS=Mus mus... 38.0 0.11
sp|O55208|FIGLA_MOUSE Factor in the germline alpha OS=Mus musculu... 38.0 0.12
sp|Q90260|ASL1B_DANRE Achaete-scute homolog 1b OS=Danio rerio OX=... 38.0 0.12
sp|P97309|MESP1_MOUSE Mesoderm posterior protein 1 OS=Mus musculu... 38.3 0.13
sp|O94979|SC31A_HUMAN Protein transport protein Sec31A OS=Homo sa... 39.5 0.13
sp|Q32PV5|TCF21_DANRE Transcription factor 21 OS=Danio rerio OX=7... 37.6 0.14
sp|Q8GXT3|BH123_ARATH Transcription factor bHLH123 OS=Arabidopsis... 38.7 0.15
sp|Q9LJX1|PRE5_ARATH Transcription factor PRE5 OS=Arabidopsis tha... 36.0 0.15
sp|Q9VGJ5|FER3_DROME Protein Fer3 OS=Drosophila melanogaster OX=7... 37.6 0.15
sp|P52550|MYBA_CHICK Myb-related protein A OS=Gallus gallus OX=90... 38.7 0.16
sp|Q7RTS3|PTF1A_HUMAN Pancreas transcription factor 1 subunit alp... 38.3 0.16
sp|Q5E9S3|TCF21_BOVIN Transcription factor 21 OS=Bos taurus OX=99... 37.6 0.16
sp|Q9CA46|BZIP8_ARATH Basic leucine zipper 8 OS=Arabidopsis thali... 36.8 0.16
sp|A5VUS1|LOVHK_BRUO2 Blue-light-activated histidine kinase OS=Br... 38.7 0.17
sp|Q75KV9|BH148_ORYSJ Transcription factor BHLH148 OS=Oryza sativ... 38.3 0.17
sp|P26014|MYCN_SERCA N-myc proto-oncogene protein OS=Serinus cana... 38.3 0.18
sp|Q8K284|TF3C1_MOUSE General transcription factor 3C polypeptide... 38.7 0.18
sp|O43680|TCF21_HUMAN Transcription factor 21 OS=Homo sapiens OX=... 37.2 0.20
sp|Q86AC8|MYOG_DICDI Myosin-G heavy chain OS=Dictyostelium discoi... 38.7 0.22
sp|P16076|MYODB_XENLA Myoblast determination protein 1 homolog B ... 38.0 0.23
sp|Q63505|TF3C1_RAT General transcription factor 3C polypeptide 1... 38.7 0.23
sp|O35437|TCF21_MOUSE Transcription factor 21 OS=Mus musculus OX=... 36.8 0.24
sp|Q0DDF6|ILI4_ORYSJ Transcription factor ILI4 OS=Oryza sativa su... 35.3 0.24
sp|A2YAW8|ILI4_ORYSI Transcription factor ILI4 OS=Oryza sativa su... 35.3 0.24
sp|P21438|MYC_FLVTT Viral myc transforming protein OS=Feline leuk... 38.0 0.26
sp|Q17295|MYOD1_CAEBR Myoblast determination protein 1 homolog OS... 37.6 0.26
sp|Q9LT67|BH113_ARATH Transcription factor bHLH113 OS=Arabidopsis... 37.6 0.27
sp|Q8W2F2|BH011_ARATH Transcription factor bHLH11 OS=Arabidopsis ... 37.6 0.27
sp|P79920|NDF4_XENLA Neurogenic differentiation factor 4 OS=Xenop... 37.6 0.28
sp|P34060|MYOG_COTJA Myogenin OS=Coturnix japonica OX=93934 GN=MY... 37.2 0.28
sp|Q9NZB2|F120A_HUMAN Constitutive coactivator of PPAR-gamma-like... 38.0 0.30
sp|Q7XJU1|BH154_ARATH Transcription factor bHLH154 OS=Arabidopsis... 36.4 0.30
sp|P12525|MYCP1_HUMAN Putative myc-like protein MYCLP1 OS=Homo sa... 37.6 0.31
sp|P34555|HLH4_CAEEL Helix-loop-helix protein 4 OS=Caenorhabditis... 36.8 0.34
sp|Q29031|MYC_PIG Myc proto-oncogene protein OS=Sus scrofa OX=982... 37.6 0.35
sp|Q338G6|ILI7_ORYSJ Transcription factor ILI7 OS=Oryza sativa su... 34.9 0.35
sp|A2Z730|ILI7_ORYSI Transcription factor ILI7 OS=Oryza sativa su... 34.9 0.35
sp|P22816|MYOD_DROME Myogenic-determination protein OS=Drosophila... 37.2 0.35
sp|Q0DUR2|ILI6_ORYSJ Transcription factor ILI6 OS=Oryza sativa su... 34.9 0.38
sp|B8APB5|ILI6_ORYSI Transcription factor ILI6 OS=Oryza sativa su... 34.9 0.38
sp|Q69V10|BH062_ORYSJ Transcription factor BHLH062 OS=Oryza sativ... 36.8 0.40
sp|B6VQA1|DIMM_DROME Protein dimmed OS=Drosophila melanogaster OX... 37.2 0.41
sp|G5EEQ5|REF1_CAEEL Regulator of fusion ref-1 OS=Caenorhabditis ... 37.2 0.41
sp|Q4R535|CELF4_MACFA CUGBP Elav-like family member 4 OS=Macaca f... 37.2 0.43
sp|Q90259|ASL1A_DANRE Achaete-scute homolog 1a OS=Danio rerio OX=... 36.4 0.44
sp|Q90417|RXRBB_DANRE Retinoic acid receptor RXR-beta-B OS=Danio ... 37.2 0.48
sp|Q8IWI9|MGAP_HUMAN MAX gene-associated protein OS=Homo sapiens ... 37.6 0.50
sp|M0QWB7|ASCL5_MOUSE Achaete-scute homolog 5 OS=Mus musculus OX=... 36.0 0.51
sp|Q9BRJ9|MESP1_HUMAN Mesoderm posterior protein 1 OS=Homo sapien... 36.8 0.52
sp|A2AWL7|MGAP_MOUSE MAX gene-associated protein OS=Mus musculus ... 37.6 0.54
sp|Q9EQW6|OLIG2_MOUSE Oligodendrocyte transcription factor 2 OS=M... 36.8 0.58
sp|Q24JP5|T132A_HUMAN Transmembrane protein 132A OS=Homo sapiens ... 37.2 0.59
sp|O08574|MESP2_MOUSE Mesoderm posterior protein 2 OS=Mus musculu... 36.4 0.69
sp|Q7JGP2|TWST1_MACTO Twist-related protein 1 OS=Macaca tonkeana ... 35.7 0.71
sp|Q04657|KATG_MYCIT Catalase-peroxidase OS=Mycobacterium intrace... 36.8 0.72
sp|Q13516|OLIG2_HUMAN Oligodendrocyte transcription factor 2 OS=H... 36.4 0.75
sp|Q9FLE9|PRE1_ARATH Transcription factor PRE1 OS=Arabidopsis tha... 33.7 0.79
sp|E0X9C7|TODS_PSEPT Sensor histidine kinase TodS OS=Pseudomonas ... 36.8 0.82
sp|A5W4E3|TODS_PSEP1 Sensor histidine kinase TodS OS=Pseudomonas ... 36.8 0.82
sp|Q8MIF3|TWST1_EULFU Twist-related protein 1 OS=Eulemur fulvus f... 35.7 0.83
sp|Q8MID5|TWST1_MICMU Twist-related protein 1 OS=Microcebus murin... 35.7 0.83
sp|Q7RTU5|ASCL5_HUMAN Achaete-scute homolog 5 OS=Homo sapiens OX=... 36.0 0.84
sp|Q9JJR7|ASCL3_MOUSE Achaete-scute homolog 3 OS=Mus musculus OX=... 35.3 0.87
sp|P26687|TWST1_MOUSE Twist-related protein 1 OS=Mus musculus OX=... 35.7 0.87
sp|Q8MIB5|TWST1_SAGOE Twist-related protein 1 OS=Saguinus oedipus... 35.7 0.89
sp|Q8MIE7|TWST1_NOMCO Twist-related protein 1 OS=Nomascus concolo... 35.7 0.92
sp|Q3KP66|INAVA_HUMAN Innate immunity activator protein OS=Homo s... 36.4 0.93
sp|P09774|AST3_DROME Achaete-scute complex protein T3 OS=Drosophi... 35.7 0.95
sp|Q15672|TWST1_HUMAN Twist-related protein 1 OS=Homo sapiens OX=... 35.3 0.95
sp|Q8MIB9|TWST1_PONPY Twist-related protein 1 OS=Pongo pygmaeus O... 35.3 0.96
sp|Q8MIH8|TWST1_CEBCA Twist-related protein 1 OS=Cebus capucinus ... 35.3 0.98
sp|Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis ... 35.7 1.1
sp|Q8VZ22|BH103_ARATH Transcription factor bHLH103 OS=Arabidopsis... 35.7 1.1
sp|O80674|BH106_ARATH Transcription factor bHLH106 OS=Arabidopsis... 35.7 1.2
sp|Q9QZR8|PDZD2_RAT PDZ domain-containing protein 2 OS=Rattus nor... 36.0 1.3
sp|Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis ... 35.7 1.3
sp|Q90XB3|OLIG2_CHICK Oligodendrocyte transcription factor 2 OS=G... 35.3 1.4
sp|Q9BYE0|HES7_HUMAN Transcription factor HES-7 OS=Homo sapiens O... 34.9 1.4
sp|Q5RDA9|FBX42_PONAB F-box only protein 42 OS=Pongo abelii OX=96... 35.7 1.5
sp|B9FXT3|UDT1_ORYSJ Transcription factor UDT1 OS=Oryza sativa su... 34.9 1.6
sp|Q9GPH3|ATFC_BOMMO Activating transcription factor of chaperone... 34.9 1.9
sp|Q8MI06|TWST1_GORGO Twist-related protein 1 OS=Gorilla gorilla ... 34.5 1.9
sp|Q869W0|HBX2_DICDI Homeobox protein 2 OS=Dictyostelium discoide... 35.3 1.9
sp|Q9FHA7|HEC1_ARATH Transcription factor HEC1 OS=Arabidopsis tha... 34.5 2.0
sp|Q6PGZ3|MIPT3_DANRE TRAF3-interacting protein 1 OS=Danio rerio ... 35.3 2.0
sp|P9WLK3|Y2083_MYCTU Uncharacterized protein Rv2083 OS=Mycobacte... 34.9 2.0
sp|Q9NQ33|ASCL3_HUMAN Achaete-scute homolog 3 OS=Homo sapiens OX=... 34.1 2.0
sp|Q9STJ6|BH126_ARATH Transcription factor bHLH126 OS=Arabidopsis... 34.5 2.1
sp|Q10R47|ILI3_ORYSJ Transcription factor ILI3 OS=Oryza sativa su... 32.6 2.2
sp|A2XD15|ILI3_ORYSI Transcription factor ILI3 OS=Oryza sativa su... 32.6 2.2
sp|Q9SND4|HEC2_ARATH Transcription factor HEC2 OS=Arabidopsis tha... 34.5 2.3
sp|Q9HFW2|CLA4_EREGS Serine/threonine-protein kinase CLA4 OS=Erem... 35.3 2.3
sp|O60682|MUSC_HUMAN Musculin OS=Homo sapiens OX=9606 GN=MSC PE=1... 34.1 2.4
sp|Q9SN74|BH047_ARATH Transcription factor bHLH47 OS=Arabidopsis ... 34.5 2.4
sp|Q06234|ASCL1_XENLA Achaete-scute homolog 1 OS=Xenopus laevis O... 34.1 2.5
sp|Q9I9K0|FOG1_XENLA Zinc finger protein ZFPM1 (Fragment) OS=Xeno... 35.3 2.5
sp|P19359|ASCL1_RAT Achaete-scute homolog 1 OS=Rattus norvegicus ... 34.5 2.5
sp|Q5TGY3|AHDC1_HUMAN Transcription factor Gibbin OS=Homo sapiens... 35.3 2.6
sp|P56672|OTP_DROME Homeobox protein orthopedia OS=Drosophila mel... 34.9 2.7
sp|O95602|RPA1_HUMAN DNA-directed RNA polymerase I subunit RPA1 O... 34.9 2.8
sp|Q5RB69|CCD86_PONAB Coiled-coil domain-containing protein 86 OS... 34.5 2.8
sp|O88940|MUSC_MOUSE Musculin OS=Mus musculus OX=10090 GN=Msc PE=... 34.1 2.9
sp|O35254|GORS1_RAT Golgi reassembly-stacking protein 1 OS=Rattus... 34.5 3.0
sp|P50553|ASCL1_HUMAN Achaete-scute homolog 1 OS=Homo sapiens OX=... 34.1 3.1
sp|A6NNC1|P12LL_HUMAN Putative POM121-like protein 1-like OS=Homo... 34.9 3.2
sp|Q8CEE6|PASK_MOUSE PAS domain-containing serine/threonine-prote... 34.9 3.4
sp|Q8MI03|TWST1_PANTR Twist-related protein 1 OS=Pan troglodytes ... 33.7 3.4
sp|Q9LXG5|PRE2_ARATH Transcription factor PRE2 OS=Arabidopsis tha... 32.2 3.4
sp|P9WLK2|Y2083_MYCTO Uncharacterized protein MT2145 OS=Mycobacte... 34.1 3.4
sp|Q0VG99|MESP2_HUMAN Mesoderm posterior protein 2 OS=Homo sapien... 34.5 3.5
sp|Q99929|ASCL2_HUMAN Achaete-scute homolog 2 OS=Homo sapiens OX=... 33.7 3.5
sp|Q2EGB9|ASCL2_BOVIN Achaete-scute homolog 2 OS=Bos taurus OX=99... 33.3 3.9
sp|Q02067|ASCL1_MOUSE Achaete-scute homolog 1 OS=Mus musculus OX=... 33.7 4.1
sp|Q6A0A9|F120A_MOUSE Constitutive coactivator of PPAR-gamma-like... 34.5 4.3
sp|O35885|ASCL2_MOUSE Achaete-scute homolog 2 OS=Mus musculus OX=... 33.7 4.7
sp|Q9SFZ3|BH110_ARATH Transcription factor bHLH110 OS=Arabidopsis... 34.1 4.9
sp|W3X7S0|PFMAF_PESFW Transcription factor PfmaF OS=Pestalotiopsi... 33.7 5.1
sp|B4KND9|EAF_DROMO Ell-associated factor Eaf OS=Drosophila mojav... 33.7 5.2
sp|Q8BKT2|HES7_MOUSE Transcription factor HES-7 OS=Mus musculus O... 33.3 5.2
sp|Q9VWC6|ZELDA_DROME Transcription factor Zelda OS=Drosophila me... 34.1 5.8
sp|P09775|AST8_DROME Achaete-scute complex protein T8 OS=Drosophi... 33.7 6.3
sp|P19360|ASCL2_RAT Achaete-scute homolog 2 OS=Rattus norvegicus ... 33.3 6.3
sp|A0A0U2WFX7|RIA1_USTMD Regulator of itaconic acid biosynthesis ... 33.3 6.4
sp|Q8BW74|HLF_MOUSE Hepatic leukemia factor OS=Mus musculus OX=10... 33.0 8.3
sp|Q16534|HLF_HUMAN Hepatic leukemia factor OS=Homo sapiens OX=96... 33.0 8.3
>sp|O00327|BMAL1_HUMAN Basic helix-loop-helix ARNT-like protein
1 OS=Homo sapiens OX=9606 GN=BMAL1 PE=1 SV=2
Length=626
Score = 883 bits (2280), Expect = 0.0, Method: Composition-based stats.
Identities = 626/626 (100%), Positives = 626/626 (100%), Gaps = 0/626 (0%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR
Sbjct 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ
Sbjct 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
Query 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL
Sbjct 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
Query 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC
Sbjct 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE
Sbjct 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
Query 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI
Sbjct 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
Query 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW
Sbjct 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
Query 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT 480
FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT
Sbjct 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT 480
Query 481 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI
Sbjct 481 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
Query 541 LNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 600
LNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM
Sbjct 541 LNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 600
Query 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
AVIMSLLEADAGLGGPVDFSDLPWPL
Sbjct 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
>sp|O88529|BMAL1_MESAU Basic helix-loop-helix ARNT-like protein
1 OS=Mesocricetus auratus OX=10036 GN=BMAL1 PE=2 SV=1
Length=626
Score = 880 bits (2272), Expect = 0.0, Method: Composition-based stats.
Identities = 620/626 (99%), Positives = 622/626 (99%), Gaps = 0/626 (0%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGS+TDYQESMDTDKDDPHGR
Sbjct 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSATDYQESMDTDKDDPHGR 60
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
LEY EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ
Sbjct 61 LEYAEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
Query 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL
Sbjct 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
Query 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC
Sbjct 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
SGARRSFFCRMKCNRPSVKVEDKDF STCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE
Sbjct 241 SGARRSFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
Query 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI
Sbjct 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
Query 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW
Sbjct 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
Query 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT 480
FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT
Sbjct 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT 480
Query 481 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI
Sbjct 481 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
Query 541 LNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 600
LNGGTPDIPS+GLL GQAQE PGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM
Sbjct 541 LNGGTPDIPSTGLLPGQAQETPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 600
Query 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
AVIMSLLEADAGLGGPVDFSDLPWPL
Sbjct 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
>sp|Q5R4T2|BMAL1_PONAB Basic helix-loop-helix ARNT-like protein
1 OS=Pongo abelii OX=9601 GN=BMAL1 PE=2 SV=1
Length=625
Score = 876 bits (2262), Expect = 0.0, Method: Composition-based stats.
Identities = 623/626 (99%), Positives = 623/626 (99%), Gaps = 1/626 (0%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR
Sbjct 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ
Sbjct 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
Query 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSES FKIL
Sbjct 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESAFKIL 180
Query 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC
Sbjct 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKK DRKSFCTIHSTGYLKSWPPTKMGLDE
Sbjct 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKK-DRKSFCTIHSTGYLKSWPPTKMGLDE 299
Query 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI
Sbjct 300 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 359
Query 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW
Sbjct 360 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 419
Query 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT 480
FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASP SMDSMLPSGEGGPKRTHPT
Sbjct 420 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPRSMDSMLPSGEGGPKRTHPT 479
Query 481 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI
Sbjct 480 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 539
Query 541 LNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 600
LNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM
Sbjct 540 LNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 599
Query 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
AVIMSLLEADAGLGGPVDFSDLPWPL
Sbjct 600 AVIMSLLEADAGLGGPVDFSDLPWPL 625
>sp|Q9EPW1|BMAL1_RAT Basic helix-loop-helix ARNT-like protein
1 OS=Rattus norvegicus OX=10116 GN=Bmal1 PE=2 SV=4
Length=626
Score = 873 bits (2255), Expect = 0.0, Method: Composition-based stats.
Identities = 615/626 (98%), Positives = 619/626 (99%), Gaps = 0/626 (0%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
MADQRMDISSTISDFMSPGPTDLLS SL TSGVDCNRKRKGS+TDYQESMDTDKDDPHGR
Sbjct 1 MADQRMDISSTISDFMSPGPTDLLSGSLSTSGVDCNRKRKGSATDYQESMDTDKDDPHGR 60
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
LEY EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ
Sbjct 61 LEYAEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
Query 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
HMKTLRGATNPYTEANYKPT LSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL
Sbjct 121 HMKTLRGATNPYTEANYKPTSLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
Query 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC
Sbjct 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
SGARRSFFCRMKCNRPSVKVEDKDF STCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE
Sbjct 241 SGARRSFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
Query 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
D+EPDNEGCNLSCLVAIGRLHSH+VPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI
Sbjct 301 DSEPDNEGCNLSCLVAIGRLHSHMVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
Query 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW
Sbjct 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
Query 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT 480
FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT
Sbjct 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT 480
Query 481 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI
Sbjct 481 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
Query 541 LNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 600
LNGGTPDIPS+GLL GQAQE PGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM
Sbjct 541 LNGGTPDIPSAGLLPGQAQETPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 600
Query 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
AVIMSLLEADAGLGGPVDFSDLPWPL
Sbjct 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
>sp|Q91YA9|BMAL1_NANGA Basic helix-loop-helix ARNT-like protein
1 OS=Nannospalax galili OX=1026970 GN=Bmal1 PE=1 SV=1
Length=626
Score = 873 bits (2254), Expect = 0.0, Method: Composition-based stats.
Identities = 616/626 (98%), Positives = 620/626 (99%), Gaps = 0/626 (0%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR
Sbjct 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ
Sbjct 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
Query 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL
Sbjct 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
Query 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC
Sbjct 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE
Sbjct 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
Query 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
DNE D+EGCNLSCLVAIGRLHSHVVPQP G+I+VKS EYVSRHAIDGKFVFVDQRATAI
Sbjct 301 DNEADSEGCNLSCLVAIGRLHSHVVPQPAGGDIKVKSTEYVSRHAIDGKFVFVDQRATAI 360
Query 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW
Sbjct 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
Query 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT 480
FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPK+THPT
Sbjct 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKKTHPT 480
Query 481 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI
Sbjct 481 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
Query 541 LNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 600
LNGGTPDIPSSGLL GQAQENPGYPYSDSSSILGENPHI IDMIDNDQGSSSPSNDEAAM
Sbjct 541 LNGGTPDIPSSGLLPGQAQENPGYPYSDSSSILGENPHISIDMIDNDQGSSSPSNDEAAM 600
Query 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
AVIMSLLEADAGLGGPVDFSDLPWPL
Sbjct 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
>sp|A0MLS5|BMAL1_HORSE Basic helix-loop-helix ARNT-like protein
1 OS=Equus caballus OX=9796 GN=BMAL1 PE=2 SV=1
Length=626
Score = 872 bits (2252), Expect = 0.0, Method: Composition-based stats.
Identities = 620/626 (99%), Positives = 622/626 (99%), Gaps = 0/626 (0%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
MADQRMDISSTISDFMSPG TDLLSS LGTSG+DCNRKRKGSSTDYQESMDTDKDDPHGR
Sbjct 1 MADQRMDISSTISDFMSPGATDLLSSPLGTSGMDCNRKRKGSSTDYQESMDTDKDDPHGR 60
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ
Sbjct 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
Query 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL
Sbjct 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
Query 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC
Sbjct 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE
Sbjct 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
Query 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI
Sbjct 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
Query 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW
Sbjct 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
Query 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT 480
FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT
Sbjct 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT 480
Query 481 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
VPGIPGGTRAGAGKIGRMIAEE+MEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI
Sbjct 481 VPGIPGGTRAGAGKIGRMIAEEVMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
Query 541 LNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 600
LNGGTPDIPSSGL GQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM
Sbjct 541 LNGGTPDIPSSGLPPGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 600
Query 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
AVIMSLLEADAGLGGPVDFSDLPWPL
Sbjct 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
>sp|Q9WTL8|BMAL1_MOUSE Basic helix-loop-helix ARNT-like protein
1 OS=Mus musculus OX=10090 GN=Bmal1 PE=1 SV=2
Length=632
Score = 867 bits (2239), Expect = 0.0, Method: Composition-based stats.
Identities = 615/633 (97%), Positives = 618/633 (98%), Gaps = 8/633 (1%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQ-------ESMDTD 53
MADQRMDISSTISDFMSPGPTDLLS SLGTSGVDCNRKRKGS+TDYQ ESMDTD
Sbjct 1 MADQRMDISSTISDFMSPGPTDLLSGSLGTSGVDCNRKRKGSATDYQLDDFAFEESMDTD 60
Query 54 KDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT 113
KDDPHGRLEY EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT
Sbjct 61 KDDPHGRLEYAEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT 120
Query 114 VLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVS 173
VLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVS
Sbjct 121 VLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVS 180
Query 174 ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT 233
ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT
Sbjct 181 ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT 240
Query 234 PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP 293
PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDF STCSKKK DRKSFCTIHSTGYLKSWPP
Sbjct 241 PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFASTCSKKK-DRKSFCTIHSTGYLKSWPP 299
Query 294 TKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFV 353
TKMGLDEDNEPDNEGCNLSCLVAIGRLHSH+VPQP NGEIRVKSMEYVSRHAIDGKFVFV
Sbjct 300 TKMGLDEDNEPDNEGCNLSCLVAIGRLHSHMVPQPANGEIRVKSMEYVSRHAIDGKFVFV 359
Query 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 413
DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF
Sbjct 360 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 419
Query 414 ITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGG 473
ITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTA PHSMDSMLPSGEGG
Sbjct 420 ITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTAPPHSMDSMLPSGEGG 479
Query 474 PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDAS 533
PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDAS
Sbjct 480 PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDAS 539
Query 534 SPGGKKILNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSP 593
SPGGKKILNGGTPDIPS+GLL GQAQE PGYPYSDSSSILGENPHIGIDMIDNDQGSSSP
Sbjct 540 SPGGKKILNGGTPDIPSTGLLPGQAQETPGYPYSDSSSILGENPHIGIDMIDNDQGSSSP 599
Query 594 SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 626
SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
Sbjct 600 SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 632
>sp|Q6YGZ5|BMAL1_TYTAL Basic helix-loop-helix ARNT-like protein
1 OS=Tyto alba OX=56313 GN=BMAL1 PE=2 SV=1
Length=633
Score = 839 bits (2168), Expect = 0.0, Method: Composition-based stats.
Identities = 595/633 (94%), Positives = 604/633 (95%), Gaps = 7/633 (1%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQ-------ESMDTD 53
MADQRMDISSTISDFMSP P DL+SSSL TSG+DCNRKRKGSSTDYQ E MDTD
Sbjct 1 MADQRMDISSTISDFMSPDPADLISSSLSTSGMDCNRKRKGSSTDYQLDGFPFEEGMDTD 60
Query 54 KDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT 113
KDD HGRLEYT+ QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT
Sbjct 61 KDDQHGRLEYTDQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT 120
Query 114 VLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVS 173
VLRMAVQHMKTLRGATNPYTEANYKP FLSDDELKHLILRAADGFLFVVGCDRGKILFVS
Sbjct 121 VLRMAVQHMKTLRGATNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVS 180
Query 174 ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT 233
ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT
Sbjct 181 ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT 240
Query 234 PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP 293
PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP
Sbjct 241 PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP 300
Query 294 TKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFV 353
TKMGLDEDNEPDNEGCNLSCLVAIGRLH HVVPQPVNGEIRVK EYVSRHAIDGKFVFV
Sbjct 301 TKMGLDEDNEPDNEGCNLSCLVAIGRLHPHVVPQPVNGEIRVKPTEYVSRHAIDGKFVFV 360
Query 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 413
DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF
Sbjct 361 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 420
Query 414 ITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGG 473
ITLRSRWFSFMNPWTKEVEYIVSTNTVV NVL+ GD FPQL ASPHSMDS+L +GEGG
Sbjct 421 ITLRSRWFSFMNPWTKEVEYIVSTNTVVSTNVLDSGDAAFPQLAASPHSMDSVLQAGEGG 480
Query 474 PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDAS 533
PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPD S
Sbjct 481 PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDTS 540
Query 534 SPGGKKILNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSP 593
SPGGKKILNGGTPDI S+GLLSGQ Q+N GYPYSD+SSILGEN HIGIDMIDNDQGSSSP
Sbjct 541 SPGGKKILNGGTPDISSAGLLSGQIQDNSGYPYSDNSSILGENSHIGIDMIDNDQGSSSP 600
Query 594 SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 626
SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
Sbjct 601 SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 633
>sp|Q9I8T7|BMAL1_CHICK Basic helix-loop-helix ARNT-like protein
1 OS=Gallus gallus OX=9031 GN=BMAL1 PE=1 SV=1
Length=633
Score = 832 bits (2149), Expect = 0.0, Method: Composition-based stats.
Identities = 590/633 (93%), Positives = 602/633 (95%), Gaps = 7/633 (1%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQ-------ESMDTD 53
MADQRMDISSTISDFMSP P DL+SSSL TSGVDCNRKRKGSSTDYQ E MDTD
Sbjct 1 MADQRMDISSTISDFMSPDPADLISSSLSTSGVDCNRKRKGSSTDYQLDGFPFEEGMDTD 60
Query 54 KDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT 113
KDD HGRL+Y + QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT
Sbjct 61 KDDQHGRLDYADQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT 120
Query 114 VLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVS 173
VLRMAVQHMKTLRGATNPYTEANYKP FLSDDELKHLILRAADGFLFVVGCDRGKILFVS
Sbjct 121 VLRMAVQHMKTLRGATNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVS 180
Query 174 ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT 233
ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT
Sbjct 181 ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT 240
Query 234 PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP 293
PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP
Sbjct 241 PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP 300
Query 294 TKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFV 353
TKMGLDEDNEPDNEGCNLSCLVAIGRLH HVVPQPVNGEIRVK EYVSRHAIDGKFVFV
Sbjct 301 TKMGLDEDNEPDNEGCNLSCLVAIGRLHPHVVPQPVNGEIRVKPTEYVSRHAIDGKFVFV 360
Query 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 413
DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF
Sbjct 361 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 420
Query 414 ITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGG 473
ITLRSRWFSFMNPWTKEVEYIVSTNTVV +VL+ GD FPQL ASPHSMDS+L +GEGG
Sbjct 421 ITLRSRWFSFMNPWTKEVEYIVSTNTVVSTSVLDSGDAAFPQLAASPHSMDSVLQAGEGG 480
Query 474 PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDAS 533
PKR+HPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPD S
Sbjct 481 PKRSHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDTS 540
Query 534 SPGGKKILNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSP 593
SPG KKILNGGTPDI S+GLLSGQ Q++ GYPYSD+SSILGEN HIGIDMIDNDQGSSSP
Sbjct 541 SPGSKKILNGGTPDISSAGLLSGQIQDSSGYPYSDNSSILGENSHIGIDMIDNDQGSSSP 600
Query 594 SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 626
SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
Sbjct 601 SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 633
>sp|Q8QGQ7|BMAL2_CHICK Basic helix-loop-helix ARNT-like protein
2 OS=Gallus gallus OX=9031 GN=BMAL2 PE=1 SV=1
Length=622
Score = 693 bits (1787), Expect = 0.0, Method: Composition-based stats.
Identities = 337/626 (54%), Positives = 435/626 (69%), Gaps = 31/626 (5%)
Query 3 DQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLE 62
D I+S + M+P T ++S S V+ RKRKGS +D Q++++ D DP R E
Sbjct 26 DGNSCIASGVPSLMNP-ITKPATTSFNNSVVEIPRKRKGSDSDNQDTVEVD-GDPQKRNE 83
Query 63 YTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
EH +IK+ REAHSQ EKRRRDKMN+ I+EL++++P CN M+RKLDKLTVLRMAVQH+
Sbjct 84 DEEHL-KIKDFREAHSQTEKRRRDKMNNLIEELSAMIPQCNPMARKLDKLTVLRMAVQHL 142
Query 123 KTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNY 182
K+L+G+T+ YTE YKP+FL DDEL+ LILRAADGFLFVVGC+RGKILFVSESV KILNY
Sbjct 143 KSLKGSTSSYTEVRYKPSFLKDDELRQLILRAADGFLFVVGCNRGKILFVSESVCKILNY 202
Query 183 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSG 242
Q LIGQSLFDYLHPKD+AKVKEQLSSSD +PRE+L+D KTGL V TD GP+RL SG
Sbjct 203 DQTSLIGQSLFDYLHPKDVAKVKEQLSSSDVSPREKLVDGKTGLQVHTDFQAGPARLNSG 262
Query 243 ARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDN 302
ARRSFFCR+KC+R +VK E + P + KK D + +CTIH TGY+K+WPP+++G++E+N
Sbjct 263 ARRSFFCRIKCSRTTVKEEKECLP---NPKKKDHRKYCTIHCTGYMKNWPPSEVGVEEEN 319
Query 303 EPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILA 362
+ + N +CLVAIGRLH ++VPQ GEI+VK+ E+V+R A+DGKFV+VDQRATAIL
Sbjct 320 DVEKNSSNFNCLVAIGRLHPYIVPQKS-GEIKVKATEFVTRFAMDGKFVYVDQRATAILG 378
Query 363 YLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFS 422
YLPQELLGTSCYEY HQDD HLAE H++VLQ +EK+ TN YKF+ KDGSFITL+S+WFS
Sbjct 379 YLPQELLGTSCYEYCHQDDHNHLAEKHKEVLQNKEKVFTNSYKFRAKDGSFITLKSQWFS 438
Query 423 FMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVP 482
FMNPWTKE+EYIVS NTVVL + + Q++ EG K++ +VP
Sbjct 439 FMNPWTKELEYIVSNNTVVLGH----NESAEEQVS-------YGSQPAEGAVKQSLVSVP 487
Query 483 GIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILN 542
G+ GT GAG IG IA EI+E+ R+ S P SP ++ P A + + N
Sbjct 488 GMSSGTVLGAGSIGTEIANEILELQRLHSSPPGEL--SPSHLLRKSPSPALTVNCSNVPN 545
Query 543 GGTPDI-PSSGLLSGQAQENPG-YPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM 600
+ PS + +++N G P+ + +LG N + + + ND+ AM
Sbjct 546 KELIQLCPSEAEVLETSEQNQGAIPFPSNEPLLGGNSQLDFAICE---------NDDTAM 596
Query 601 AVIMSLLEADAGLGGPVDFSDLPWPL 626
+M+ LEAD GLG P + SD+ W L
Sbjct 597 TALMNYLEADGGLGDPAELSDIQWAL 622
>sp|Q8WYA1|BMAL2_HUMAN Basic helix-loop-helix ARNT-like protein
2 OS=Homo sapiens OX=9606 GN=BMAL2 PE=1 SV=2
Length=636
Score = 675 bits (1740), Expect = 0.0, Method: Composition-based stats.
Identities = 312/649 (48%), Positives = 416/649 (64%), Gaps = 49/649 (8%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTD-YQESMDTDK----- 54
+ ++ I+ +S +SPG S + + RKRKGS +D Q + T+K
Sbjct 14 LREENQCIAPVVSSRVSPGTRPTAMGSFSSHMTEFPRKRKGSDSDPSQSGIMTEKVVEKL 73
Query 55 ----------------DDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASL 98
R+E EHQ ++K REAHSQ EKRRRDKMN+ I+EL+++
Sbjct 74 SQNPLTYLLSTRIEISASSGSRVEDGEHQVKMKAFREAHSQTEKRRRDKMNNLIEELSAM 133
Query 99 VPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGF 158
+P CN M+RKLDKLTVLRMAVQH+++L+G TN Y +NY+P+FL D+EL+HLIL+ A+GF
Sbjct 134 IPQCNPMARKLDKLTVLRMAVQHLRSLKGLTNSYVGSNYRPSFLQDNELRHLILKTAEGF 193
Query 159 LFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRER 218
LFVVGC+RGKILFVS+SV KILNY Q L GQSLFD+LHPKD+AKVKEQLSS D +PRE+
Sbjct 194 LFVVGCERGKILFVSKSVSKILNYDQASLTGQSLFDFLHPKDVAKVKEQLSSFDISPREK 253
Query 219 LIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKS 278
LIDAKTGL V +++ G +R+ SG+RRSFFCR+K + SVK E P++ KK + +
Sbjct 254 LIDAKTGLQVHSNLHAGRTRVYSGSRRSFFCRIKSCKISVKEEHGCLPNS---KKKEHRK 310
Query 279 FCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSM 338
F TIH TGYL+SWPP +G++E+ + N +CLVAIGRL ++VPQ GEI VK
Sbjct 311 FYTIHCTGYLRSWPPNIVGMEEERNSKKDNSNFTCLVAIGRLQPYIVPQNS-GEINVKPT 369
Query 339 EYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREK 398
E+++R A++GKFV+VDQRATAIL YLPQELLGTSCYEYFHQDD +L + H+ VLQ++EK
Sbjct 370 EFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAVLQSKEK 429
Query 399 ITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTA 458
I T+ YKF+ KDGSF+TL+S+WFSF NPWTKE+EYIVS NT+VL + E G+ +F
Sbjct 430 ILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLVLGHS-EPGEASF----- 483
Query 459 SPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCG 518
+ S E +++ +VPG+ GT GAG IG IA EI+++ R++ SS
Sbjct 484 ----LPCSSQSSEESSRQSCMSVPGMSTGTVLGAGSIGTDIANEILDLQRLQSSSYLDDS 539
Query 519 SSPLNITSTPPPDASSPGGKKILNGGTPDIPSS-GLLSGQAQENPGYPYSDSSSILGENP 577
S + T + S K++ P PS G L Q +L +
Sbjct 540 SPTGLMKDTHTVNCRSMSNKELF----PPSPSEMGELEATRQNQSTVAVHSHEPLLSDGA 595
Query 578 HIGIDMIDNDQGSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 626
+ D + + ND+ AMA M+ LEA+ GLG P DFSD+ W L
Sbjct 596 QLDFDALCD--------NDDTAMAAFMNYLEAEGGLGDPGDFSDIQWTL 636
>sp|Q2VPD4|BMAL2_MOUSE Basic helix-loop-helix ARNT-like protein
2 OS=Mus musculus OX=10090 GN=Bmal2 PE=1 SV=2
Length=579
Score = 570 bits (1468), Expect = 0.0, Method: Composition-based stats.
Identities = 280/614 (46%), Positives = 378/614 (62%), Gaps = 57/614 (9%)
Query 34 DCNRKRKGSSTD-------YQESMDTDKDDPHGRLEYTEHQ-GRIKNAREAHSQIEKRRR 85
+ RKR+G + ++++ +P L T REAHSQ+EKRRR
Sbjct 2 EFPRKRRGRDSQPLQSEFMTDTTVESLPQNPFASLLSTRTGVSAPSGIREAHSQMEKRRR 61
Query 86 DKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDD 145
DKMN I +L+S++P + KLDKL+VLR AVQ++++LRG T Y N KP+F+ D
Sbjct 62 DKMNHLIQKLSSMIPPHIPTAHKLDKLSVLRRAVQYLRSLRGMTELYLGENSKPSFIQDK 121
Query 146 ELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVK 205
EL HLIL+AA+GFLFVVGC+RG+I +VS+SV K L Y Q LIGQ+LFD+LHPKD+AKVK
Sbjct 122 ELSHLILKAAEGFLFVVGCERGRIFYVSKSVSKTLRYDQASLIGQNLFDFLHPKDVAKVK 181
Query 206 EQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDF 265
EQLS D +PRE+ ID KT V + G R+ SG+RRSFF RMK +V V+++
Sbjct 182 EQLS-CDGSPREKPIDTKTS-QVYSHPYTGRPRMHSGSRRSFFFRMK--SCTVPVKEEQP 237
Query 266 PSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVV 325
S+CSKKK RK F T+H TGYL+SWP +G+++++ + L+CLVA+GRLH ++V
Sbjct 238 CSSCSKKKDHRK-FHTVHCTGYLRSWPLNVVGMEKESGGGKDSGPLTCLVAMGRLHPYIV 296
Query 326 PQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
PQ G+I V+ E+++R A++GKFV+VDQRATAIL YLPQELLGTSCYEYFHQDD L
Sbjct 297 PQKS-GKINVRPAEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSSL 355
Query 386 AECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANV 445
+ H+ VLQ++EKI T+ YKF++KDG+F+TL+S WFSF NPWTKE+EYIVS NT+VL
Sbjct 356 TDKHKAVLQSKEKILTDSYKFRVKDGAFVTLKSEWFSFTNPWTKELEYIVSVNTLVL--- 412
Query 446 LEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIME 505
G T L S S E +++ VPG+ GT GAG IG IA E++
Sbjct 413 --GRSETRLSLLHCGGS----SQSSEDSFRQSCINVPGVSTGTVLGAGSIGTDIANEVLS 466
Query 506 IHRIRGSSP-------------SSCGSSPLNITSTPPPDASSPGGKKILNGGTPDIPSSG 552
+ R+ SSP S G + ST P A SP ++L
Sbjct 467 LQRLHSSSPEDASPSEEVRDDCSVNGGNAYGPASTREPFAVSPSETEVLEAAR------- 519
Query 553 LLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAMAVIMSLLEADAG 612
Q+ E P +P+ + G++ +G D++ + +D MA M+ LEA+ G
Sbjct 520 --QHQSTE-PAHPH---GPLPGDSAQLGFDVLCD--------SDSIDMAAFMNYLEAEGG 565
Query 613 LGGPVDFSDLPWPL 626
LG P DFSD+ W L
Sbjct 566 LGDPGDFSDIQWAL 579
>sp|Q9DG12|ARNT2_DANRE Aryl hydrocarbon receptor nuclear translocator
2 OS=Danio rerio OX=7955 GN=arnt2 PE=1 SV=2
Length=737
Score = 446 bits (1146), Expect = 6e-147, Method: Composition-based stats.
Identities = 185/547 (34%), Positives = 292/547 (53%), Gaps = 32/547 (6%)
Query 18 PGPTDLLSSSLGTSGVDCNRKRKGSSTDYQES-MDTDKDDPHGRLEYTEHQG------RI 70
PGP + + +G V G + + MD D +D G +++ + +
Sbjct 17 PGPVSMPGAVVGAGQVRMTGAMPGRGGKRRSAGMDFDDEDGEGPSKFSRYDDDQIPGDKE 76
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
+ ARE HS+IE+RRR+KM +I EL+ +VPTC+A++RK DKLT+LRMAV HMK++RG N
Sbjct 77 RYARENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTGN 136
Query 131 PYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQ 190
T+ YKP+FL++ ELKHLIL AADGFLFVV + G++++VS+SV +LN+ Q++ G
Sbjct 137 TSTDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNHPQSEWFGS 196
Query 191 SLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCR 250
+LF+ +HP D+ K++EQLS+S+ + R++D KTG VK + R+C G+RRSF CR
Sbjct 197 TLFEQVHPDDVDKLREQLSTSENSMTGRILDLKTGT-VKKEGQQSSMRMCMGSRRSFICR 255
Query 251 MKCNRPSVKVEDKDFPSTCSKK--------KADRKSFCTIHSTGYLKSWPPTKMGLDEDN 302
M+C + + S+ K+ K + +H TGY+K+WPP M + +++
Sbjct 256 MRCGSAPLDHISLNRLSSMRKRYRNGLGPSKEGEAQYSVVHCTGYIKAWPPAGMTIPDED 315
Query 303 EPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILA 362
+ CLVAIGRL P ++ E++SRH DG FVD R ++
Sbjct 316 TEAGQTSK-YCLVAIGRLQVTSSPVSMDMNGLSVPTEFLSRHNSDGIITFVDPRCINVIG 374
Query 363 YLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFS 422
Y PQ+LLG E+ H +D HL E +QV++ + ++ + Y+F++K+ ++ +R+ F+
Sbjct 375 YQPQDLLGKDILEFCHPEDQSHLRESFQQVVKLKGQVLSVMYRFRMKNREWMLIRTSSFT 434
Query 423 FMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVP 482
F NP++ E+EYI+ TNT V ++ G + V
Sbjct 435 FQNPYSDEIEYIICTNTNV-----------KQLQQQQQAELEVHQRDGLTAYDLSQVPVS 483
Query 483 GIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILN 542
G+ G I E + R S G S +S+ GG+++ +
Sbjct 484 GVSAGVHESGKTI--DKTESLFSQERDPRFSDIYTGISTS--EKKMMVPSSTSGGQQLYS 539
Query 543 GGTPDIP 549
G+P P
Sbjct 540 QGSPFQP 546
>sp|Q61324|ARNT2_MOUSE Aryl hydrocarbon receptor nuclear translocator
2 OS=Mus musculus OX=10090 GN=Arnt2 PE=1 SV=2
Length=712
Score = 438 bits (1125), Expect = 4e-144, Method: Composition-based stats.
Identities = 179/500 (36%), Positives = 272/500 (54%), Gaps = 34/500 (7%)
Query 18 PGPTDLLSSSLG-TSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREA 76
PG L + + T V + MD D +D G K +RE
Sbjct 17 PGSVALPVAPMAATGQVRMAGAMPARGGKRRSGMDFDDEDGEGPS---------KFSREN 67
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEAN 136
HS+IE+RRR+KM +I EL+ +VPTC+A++RK DKLT+LRMAV HMK++RG N T+
Sbjct 68 HSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTGNKSTDGA 127
Query 137 YKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYL 196
YKP+FL++ ELKHLIL AADGFLFVV + G++++VS+SV +LN Q++ G +L++ +
Sbjct 128 YKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWFGSTLYEQV 187
Query 197 HPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRP 256
HP D+ K++EQL +S+ + R++D KTG VK + R+C G+RRSF CRM+C
Sbjct 188 HPDDVEKLREQLCTSENSMTGRILDLKTGT-VKKEGQQSSMRMCMGSRRSFICRMRCGNA 246
Query 257 SVKVEDKDFPSTCSKK--------KADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEG 308
+ + +T K+ K + +H TGY+K+WPP M + E++ +G
Sbjct 247 PLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGYIKAWPPAGMTIPEEDADVGQG 306
Query 309 CNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQEL 368
CLVAIGRL P ++ E++SRH DG FVD R +++ Y PQ+L
Sbjct 307 SK-YCLVAIGRLQVTSSPVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDL 365
Query 369 LGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWT 428
LG E+ H +D HL E +QV++ + ++ + Y+F+ K+ ++ +R+ F+F NP++
Sbjct 366 LGKDILEFCHPEDQSHLRESFQQVVKLKGQVLSVMYRFRTKNREWLLIRTSSFTFQNPYS 425
Query 429 KEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGT 488
E+EY++ TNT V + + Q G + VP +P G
Sbjct 426 DEIEYVICTNTNVKQLQQQQAELEVHQ------------RDGLSSYDLSQVPVPNLPAG- 472
Query 489 RAGAGKIGRMIAEEIMEIHR 508
AGK A+ I R
Sbjct 473 VHEAGK-SVEKADAIFSQER 491
>sp|Q78E60|ARNT2_RAT Aryl hydrocarbon receptor nuclear translocator
2 OS=Rattus norvegicus OX=10116 GN=Arnt2 PE=2 SV=1
Length=712
Score = 437 bits (1124), Expect = 5e-144, Method: Composition-based stats.
Identities = 179/500 (36%), Positives = 272/500 (54%), Gaps = 34/500 (7%)
Query 18 PGPTDLLSSSLG-TSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREA 76
PG L + + T V + MD D +D G K +RE
Sbjct 17 PGSVTLPVAPMAATGQVRMAGAMPARGGKRRSGMDFDDEDGEGPS---------KFSREN 67
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEAN 136
HS+IE+RRR+KM +I EL+ +VPTC+A++RK DKLT+LRMAV HMK++RG N T+
Sbjct 68 HSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTGNKSTDGA 127
Query 137 YKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYL 196
YKP+FL++ ELKHLIL AADGFLFVV + G++++VS+SV +LN Q++ G +L++ +
Sbjct 128 YKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWFGSTLYEQV 187
Query 197 HPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRP 256
HP D+ K++EQL +S+ + R++D KTG VK + R+C G+RRSF CRM+C
Sbjct 188 HPDDVEKLREQLCTSENSMTGRILDLKTGT-VKKEGQQSSMRMCMGSRRSFICRMRCGNA 246
Query 257 SVKVEDKDFPSTCSKK--------KADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEG 308
+ + +T K+ K + +H TGY+K+WPP M + E++ +G
Sbjct 247 PLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGYIKAWPPAGMSIPEEDADVGQG 306
Query 309 CNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQEL 368
CLVAIGRL P ++ E++SRH DG FVD R +++ Y PQ+L
Sbjct 307 SK-YCLVAIGRLQVTSSPVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDL 365
Query 369 LGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWT 428
LG E+ H +D HL E +QV++ + ++ + Y+F+ K+ ++ +R+ F+F NP++
Sbjct 366 LGKDILEFCHPEDQSHLRESFQQVVKLKGQVLSVMYRFRTKNREWLLIRTSSFTFQNPYS 425
Query 429 KEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGT 488
E+EY++ TNT V + + Q G + VP +P G
Sbjct 426 DEIEYVICTNTNVKQLQQQQAELEVHQ------------RDGLSSYDLSQVPVPNLPTG- 472
Query 489 RAGAGKIGRMIAEEIMEIHR 508
AGK A+ I R
Sbjct 473 VHEAGK-PVEKADAIFSQER 491
>sp|Q9HBZ2|ARNT2_HUMAN Aryl hydrocarbon receptor nuclear translocator
2 OS=Homo sapiens OX=9606 GN=ARNT2 PE=1 SV=2
Length=717
Score = 434 bits (1115), Expect = 1e-142, Method: Composition-based stats.
Identities = 198/570 (35%), Positives = 297/570 (52%), Gaps = 38/570 (7%)
Query 18 PGPTDLLSSSLG-TSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREA 76
PG L + + T V + MD D +D G K +RE
Sbjct 17 PGSVTLPVAPMAATGQVRMAGAMPARGGKRRSGMDFDDEDGEGPS---------KFSREN 67
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEAN 136
HS+IE+RRR+KM +I EL+ +VPTC+A++RK DKLT+LRMAV HMK++RG N T+
Sbjct 68 HSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTGNKSTDGA 127
Query 137 YKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYL 196
YKP+FL++ ELKHLIL AADGFLFVV + G++++VS+SV +LN Q++ G +L++ +
Sbjct 128 YKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWFGSTLYEQV 187
Query 197 HPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRP 256
HP D+ K++EQL +S+ + R++D KTG VK + R+C G+RRSF CRM+C
Sbjct 188 HPDDVEKLREQLCTSENSMTGRILDLKTGT-VKKEGQQSSMRMCMGSRRSFICRMRCGNA 246
Query 257 SVKVEDKDFPSTCSKK--------KADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEG 308
+ + +T K+ K + +H TGY+K+WPP M + E++ +G
Sbjct 247 PLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGYIKAWPPAGMTIPEEDADVGQG 306
Query 309 CNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQEL 368
CLVAIGRL P ++ E++SRH DG FVD R +++ Y PQ+L
Sbjct 307 SK-YCLVAIGRLQVTSSPVCMDMNGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDL 365
Query 369 LGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWT 428
LG E+ H +D HL E +QV++ + ++ + Y+F+ K+ ++ +R+ F+F NP++
Sbjct 366 LGKDILEFCHPEDQSHLRESFQQVVKLKGQVLSVMYRFRTKNREWMLIRTSSFTFQNPYS 425
Query 429 KEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGT 488
E+EYI+ TNT V + + Q G + VP +P G
Sbjct 426 DEIEYIICTNTNVKQLQQQQAELEVHQ------------RDGLSSYDLSQVPVPNLPAG- 472
Query 489 RAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGGTP-D 547
AGK A+ I R + G S AS+ G ++I + G+P
Sbjct 473 VHEAGK-SVEKADAIFSQERDPRFAEMFAGISAS--EKKMMSSASAAGTQQIYSQGSPFP 529
Query 548 IPSSGL-LSGQAQENPGYPYSDSSSILGEN 576
SG S PG SSS G+N
Sbjct 530 SGHSGKAFSSSVVHVPGVNDIQSSSSTGQN 559
>sp|O02748|ARNT_RABIT Aryl hydrocarbon receptor nuclear translocator
OS=Oryctolagus cuniculus OX=9986 GN=ARNT PE=2 SV=1
Length=790
Score = 428 bits (1100), Expect = 2e-139, Method: Composition-based stats.
Identities = 196/583 (34%), Positives = 301/583 (52%), Gaps = 30/583 (5%)
Query 17 SPGPTDLLSSSLGTSGV----------DCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEH 66
+PGP ++ V D K D ++ M DK+ +
Sbjct 25 NPGPAIQGGGTIVQRAVKRRPGLDFDDDGEGNSKFLRCD-EDQMSNDKERFARSDDEQSS 83
Query 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
+ + ARE HS+IE+RRR+KM ++I EL+ +VPTC+A++RK DKLT+LRMAV HMK+LR
Sbjct 84 ADKERLARENHSEIERRRRNKMTAYITELSDIVPTCSALARKPDKLTILRMAVSHMKSLR 143
Query 127 GATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQND 186
G N T+ +YKP+FL+D ELKHLIL AADGFLF+V C+ G++++VS+SV +LN Q++
Sbjct 144 GTGNTSTDGSYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSE 203
Query 187 LIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRS 246
G +L+D +HP D+ K++EQLS+S+ A R++D KTG VK + R+C G+RRS
Sbjct 204 WFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLKTGT-VKKEGQQSSMRMCMGSRRS 262
Query 247 FFCRMKCNRPSVKVEDKDFPSTCSKK--------KADRKSFCTIHSTGYLKSWPPTKMGL 298
F CRM+C SV + S + K F +H TGY+K+WPP + L
Sbjct 263 FICRMRCGNSSVDPVSMNRLSFVRNRCRNGLGSVKDGEPHFVVVHCTGYIKAWPPAGVSL 322
Query 299 DEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRAT 358
+D+ +G CLVAIGRL P + + E++SRH I+G F FVD R
Sbjct 323 PDDDPEAGQGSKF-CLVAIGRLQVTSSPNCTDMSNVCQPTEFISRHNIEGIFTFVDHRCV 381
Query 359 AILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRS 418
A + Y PQELLG + E+ H +D L + +QV++ + ++ + ++F+ K+ ++ R+
Sbjct 382 ATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKNREWLWTRT 441
Query 419 RWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTH 478
F+F NP++ E+EYI+ TNT V + E PT P + E G +
Sbjct 442 SSFTFQNPYSDEIEYIICTNTNVKNSSQE-PRPTLSNPIQRPQLGPTANLPLEVGSGQLA 500
Query 479 PTVPGIPGGTRAGAGKIG-RMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGG 537
P G+ G + + + + P PL + + P
Sbjct 501 PRQQQQQTELDMVPGRDGLTNYNHSQISVQPVATTGP--EHGKPLEKSDSLFAQDRDPRF 558
Query 538 KKILNGGTPD----IPSSGLLSGQAQENPGYPYSDSSSILGEN 576
++ + D I SS + + Q + G + + EN
Sbjct 559 SEMYSNINADQSKGISSSTVPATQQLFSQGNTFPPN-PRPAEN 600
>sp|P27540|ARNT_HUMAN Aryl hydrocarbon receptor nuclear translocator
OS=Homo sapiens OX=9606 GN=ARNT PE=1 SV=1
Length=789
Score = 428 bits (1099), Expect = 3e-139, Method: Composition-based stats.
Identities = 193/562 (34%), Positives = 296/562 (53%), Gaps = 43/562 (8%)
Query 34 DCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFID 93
D K D + M DK+ + + + ARE HS+IE+RRR+KM ++I
Sbjct 52 DGEGNSKFLRCDDDQ-MSNDKERFARSDDEQSSADKERLARENHSEIERRRRNKMTAYIT 110
Query 94 ELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
EL+ +VPTC+A++RK DKLT+LRMAV HMK+LRG N T+ +YKP+FL+D ELKHLIL
Sbjct 111 ELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSTDGSYKPSFLTDQELKHLILE 170
Query 154 AADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDT 213
AADGFLF+V C+ G++++VS+SV +LN Q++ G +L+D +HP D+ K++EQLS+S+
Sbjct 171 AADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVDKLREQLSTSEN 230
Query 214 APRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKK- 272
A R++D KTG VK + R+C G+RRSF CRM+C SV + S +
Sbjct 231 ALTGRILDLKTGT-VKKEGQQSSMRMCMGSRRSFICRMRCGSSSVDPVSVNRLSFVRNRC 289
Query 273 -------KADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVV 325
K F +H TGY+K+WPP + L +D+ +G CLVAIGRL
Sbjct 290 RNGLGSVKDGEPHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKF-CLVAIGRLQVTSS 348
Query 326 PQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
P + + E++SRH I+G F FVD R A + Y PQELLG + E+ H +D L
Sbjct 349 PNCTDMSNVCQPTEFISRHNIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLL 408
Query 386 AECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANV 445
+ +QV++ + ++ + ++F+ K+ ++ +R+ F+F NP++ E+EYI+ TNT V +
Sbjct 409 RDSFQQVVKLKGQVLSVMFRFRSKNQEWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSS 468
Query 446 LE-----GGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT-----VPGIPGGTRAGAGKI 495
E PQL + + + + SG+ P++ VPG G ++
Sbjct 469 QEPRPTLSNTIQRPQLGPTAN-LPLEMGSGQLAPRQQQQQTELDMVPGRDGLASYNHSQV 527
Query 496 GRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGGTPD-------- 547
+ + + S PL + P +I + D
Sbjct 528 VQPVT------------TTGPEHSKPLEKSDGLFAQDRDPRFSEIYHNINADQSKGISSS 575
Query 548 -IPSSGLLSGQAQENPGYPYSD 568
+P++ L Q P P
Sbjct 576 TVPATQQLFSQGNTFPPTPRPA 597
>sp|Q9BE97|ARNT_BOVIN Aryl hydrocarbon receptor nuclear translocator
OS=Bos taurus OX=9913 GN=ARNT PE=1 SV=1
Length=790
Score = 426 bits (1095), Expect = 1e-138, Method: Composition-based stats.
Identities = 191/552 (35%), Positives = 295/552 (53%), Gaps = 36/552 (7%)
Query 34 DCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFID 93
D K D + M DK+ + + + ARE HS+IE+RRR+KM ++I
Sbjct 52 DGEGNSKFLRCDDDQ-MSNDKERFARSDDEQSSADKERLARENHSEIERRRRNKMTAYIT 110
Query 94 ELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
EL+ +VPTC+A++RK DKLT+LRMAV HMK+LRG N T+ YKP+FL+D ELKHLIL
Sbjct 111 ELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTSTDGTYKPSFLTDQELKHLILE 170
Query 154 AADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDT 213
AADGFLF+V C+ G++++VS+SV +LN Q++ G +L+D +HP D+ K++EQLS+S+
Sbjct 171 AADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVDKLREQLSTSEN 230
Query 214 APRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKK- 272
A R++D KTG VK + R+C G+RRSF CRM+C SV + S +
Sbjct 231 ALTGRILDLKTGT-VKKEGQQSSMRMCMGSRRSFICRMRCGNSSVDSVSMNRLSFVRNRC 289
Query 273 -------KADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVV 325
K F +H TGY+K+WPP + L +D+ +G CLVAIGRL
Sbjct 290 RNGLGSAKDGEPHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKF-CLVAIGRLQVTSS 348
Query 326 PQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
P + + E++SRH I+G F FVD R A + Y PQELLG + E+ H +D L
Sbjct 349 PNCTDMSNVCQPTEFISRHNIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLL 408
Query 386 AECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANV 445
+ +QV++ + ++ + ++F+ K+ ++ +R+ F+F NP++ E+EYI+ TNT V +
Sbjct 409 RDSFQQVVKLKGQVLSVMFRFRSKNREWLWVRTSSFTFQNPYSDEIEYIICTNTNVKNSS 468
Query 446 LE-----GGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT-----VPGIPGGTRAGAGKI 495
E PQL + + + + SG+ P++ VPG G T ++
Sbjct 469 QEPRPSLSNTIQRPQLGPTAN-LSLEMGSGQLAPRQQQQQTELDVVPGRDGLTSCNHSQV 527
Query 496 ------------GRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNG 543
+ + + + R S S+ S ++ P +++ +
Sbjct 528 SVQPVTTTGPEHSKPLEKSESLFAQDRDPRFSEIYSNISTDQSKGISSSTVPATQQLFSQ 587
Query 544 G--TPDIPSSGL 553
G P P
Sbjct 588 GNTFPPTPRPAE 599
>sp|O61734|CYCL_DROME Protein cycle OS=Drosophila melanogaster
OX=7227 GN=cyc PE=1 SV=2
Length=413
Score = 411 bits (1056), Expect = 8e-138, Method: Composition-based stats.
Identities = 206/411 (50%), Positives = 284/411 (69%), Gaps = 18/411 (4%)
Query 46 YQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAM 105
+ + + ++ E + +N ++ HS+IEKRRRDKMN++I+EL+S++P C AM
Sbjct 7 CENMEEIEDEN---YDEEKSARTSDENRKQNHSEIEKRRRDKMNTYINELSSMIPMCFAM 63
Query 106 SRKLDKLTVLRMAVQHMKTLRGAT--NPYTEANYKPTFLSDDELKHLILRAADGFLFVVG 163
RKLDKLTVLRMAVQH++ +RG+ +P+ ++Y+P+FLSD ELK +IL+A++GFLFVVG
Sbjct 64 QRKLDKLTVLRMAVQHLRGIRGSGSLHPFNGSDYRPSFLSDQELKMIILQASEGFLFVVG 123
Query 164 CDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAK 223
CDRG+IL+VS+SV +LN +Q DL+GQS FD LHPKDI KVKEQLSS + PRERLIDAK
Sbjct 124 CDRGRILYVSDSVSSVLNSTQADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAK 183
Query 224 TGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKA--------D 275
T LPVKTD+ RLC GARRSFFCRMK S ++ ++ S + +
Sbjct 184 TMLPVKTDVPQSLCRLCPGARRSFFCRMKLRTASNNQIKEESDTSSSSRSSTKRKSRLTT 243
Query 276 RKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHS----HVVPQPVNG 331
+ I TGYLKSW P K D+D + D + NLSCLVAIGR+ VP ++
Sbjct 244 GHKYRVIQCTGYLKSWTPIK-DEDQDADSDEQTTNLSCLVAIGRIPPNVRNSTVPASLDN 302
Query 332 EIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQ 391
++ + ++SRH+ +GKF+F+DQRAT ++ +LPQE+LGTS YEYFH +DI L E H+
Sbjct 303 HPNIRHVLFISRHSGEGKFLFIDQRATLVIGFLPQEILGTSFYEYFHNEDIAALMESHKM 362
Query 392 VLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVL 442
V+Q EK+TT Y+F+ KD S+I L+S W +F NPWT E++YI++ N+V L
Sbjct 363 VMQVPEKVTTQVYRFRCKDNSYIQLQSEWRAFKNPWTSEIDYIIAKNSVFL 413
>sp|P79832|ARNT_ONCMY Aryl hydrocarbon receptor nuclear translocator
OS=Oncorhynchus mykiss OX=8022 GN=arnt PE=1 SV=1
Length=723
Score = 416 bits (1069), Expect = 1e-135, Method: Composition-based stats.
Identities = 190/531 (36%), Positives = 283/531 (53%), Gaps = 39/531 (7%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
+ + ARE HS+IE+RRR+KM ++I EL+ +VPTC+A++RK DKLT+LRMAV HMK+LRG+
Sbjct 62 KERFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGS 121
Query 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
N + YKP+FL+D ELKHLIL AADGFLFVV C+ G++++VS+S+ +LN SQ+D +
Sbjct 122 GNTAADGTYKPSFLTDQELKHLILEAADGFLFVVSCESGRVVYVSDSLTPVLNQSQSDWL 181
Query 189 GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFF 248
G SL+D LHP D K++EQLS++++ R++D KTG VK + R+C GARRSF
Sbjct 182 GSSLYDQLHPDDGDKLREQLSTAESNNTGRMLDLKTGT-VKKEGQQSSVRMCMGARRSFI 240
Query 249 CRMKCNRPSVKVEDKDFPSTCSKK--------KADRKSFCTIHSTGYLKSWPPTKMGLDE 300
CRM+C V+ + + + K + +H TGY+KSWPPT + L
Sbjct 241 CRMRCGSCPVEPMSMNRLNFLRSRNRNGLGPPKDGEPQYVVVHCTGYIKSWPPTGVNLT- 299
Query 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
D E DN + CLVAIGRL P + +E++SRH G F FVD R A
Sbjct 300 DEEADNILGSRYCLVAIGRLQVTSCPSDTDMNSISVPVEFISRHNCQGLFTFVDHRCMAT 359
Query 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
+ Y PQELLG + E H +D L + +QV++ + ++ + ++F K ++ +R+
Sbjct 360 VGYQPQELLGKNILELAHPEDQELLRDSFQQVVKLKGQVLSVMFRFLSKTRDWLWIRTSS 419
Query 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT 480
F+F NP+++E+EYI+ TN V Q D + +G+ T
Sbjct 420 FTFQNPFSEEIEYIICTNANV-------KQLQQQQAELGGGGRDGLYEAGQ-------VT 465
Query 481 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSP-----SSCGSSPLNITSTPPPDASSP 535
+P +P AG ++ E+H +P S+P + +
Sbjct 466 LPQMPVQAVTAAGTDHSKTMDK-AEMHPSMYPNPDQAKFLPSTSAPGVPIYPQDNNNYTT 524
Query 536 GGKKILN-----GGTP----DIPSSGLLSGQAQENPGYPYSDSSSILGENP 577
+ G P S+G + Q G P S+SS + G
Sbjct 525 ANRSNDTYSRSVGMAPQMVQPSHSAGQVLAQMSRQNGAPPSNSSPLQGGAA 575
>sp|P53762|ARNT_MOUSE Aryl hydrocarbon receptor nuclear translocator
OS=Mus musculus OX=10090 GN=Arnt PE=1 SV=3
Length=791
Score = 417 bits (1072), Expect = 3e-135, Method: Composition-based stats.
Identities = 194/578 (34%), Positives = 302/578 (52%), Gaps = 54/578 (9%)
Query 8 ISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQ------------ESMDTDKD 55
+ TI+ +PGP ++ + ++R G D + + M DK+
Sbjct 17 LGPTIAS-GNPGPGIQGGGAVVQRAI---KRRSGLDFDDEVEVNTKFLRCDDDQMCNDKE 72
Query 56 DPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVL 115
+ + + ARE HS+IE+RRR+KM ++I EL+ +VPTC+A++RK DKLT+L
Sbjct 73 RFARSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTIL 132
Query 116 RMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSES 175
RMAV HMK+LRG N T+ +YKP+FL+D ELKHLIL AADGFLF+V C+ G++++VS+S
Sbjct 133 RMAVSHMKSLRGTGNTSTDGSYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDS 192
Query 176 VFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPG 235
V +LN Q++ G +L+D +HP D+ K++EQLS+S+ A R++D KTG VK +
Sbjct 193 VTPVLNQPQSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRVLDLKTGT-VKKEGQQS 251
Query 236 PSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKK--------KADRKSFCTIHSTGY 287
R+C G+RRSF CRM+C SV + S + K F +H TGY
Sbjct 252 SMRMCMGSRRSFICRMRCGTSSVDPVSMNRLSFLRNRCRNGLGSVKEGEPHFVVVHCTGY 311
Query 288 LKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAID 347
+K+WPP + L +D+ +G CLVAIGRL P + + E++SRH I+
Sbjct 312 IKAWPPAGVSLPDDDPEAGQGSKF-CLVAIGRLQVTSSPNCTDMSNICQPTEFISRHNIE 370
Query 348 GKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFK 407
G F FVD R A + Y PQELLG + E+ H +D L + +QV++ + ++ + ++F+
Sbjct 371 GIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFR 430
Query 408 IKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSML 467
K ++ +R+ F+F NP++ E+EYI+ TNT V + E P +++
Sbjct 431 SKTREWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQE----------PRPTLSNTIP 480
Query 468 PSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITST 527
S G P + G++ + + + H P G + N +
Sbjct 481 RSQLG------------PTANLSLEMGTGQLPSRQQQQQHTELDMVPGRDGLASYNHSQV 528
Query 528 PPPDASSPGGKKILNGGTPDIPSSGLLSGQAQENPGYP 565
+S G P S GL + +P +P
Sbjct 529 SVQPVASAGS----EHSKPLEKSEGLFAQDR--DPRFP 560
>sp|P41739|ARNT_RAT Aryl hydrocarbon receptor nuclear translocator
OS=Rattus norvegicus OX=10116 GN=Arnt PE=1 SV=2
Length=800
Score = 415 bits (1065), Expect = 3e-134, Method: Composition-based stats.
Identities = 181/485 (37%), Positives = 275/485 (57%), Gaps = 24/485 (5%)
Query 8 ISSTISDFMSPGPTDLLSSSL------GTSGVDCNR----KRKGSSTDYQESMDTDKDDP 57
+ TI+ +PGP ++ SG+D + K D E M DK+
Sbjct 17 LGPTIAS-GNPGPGIQGGGAVVQRAIKRRSGLDFDDEGEVNSKFLRCD-DEQMCNDKERF 74
Query 58 HGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRM 117
+ + + ARE HS+IE+RRR+KM ++I EL+ +VPTC+A++RK DKLT+LRM
Sbjct 75 ARSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRM 134
Query 118 AVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVF 177
AV HMK+LRG N T+ +YKP+FL+D ELKHLIL AADGFLF+V C+ G++++VS+SV
Sbjct 135 AVSHMKSLRGTGNTSTDGSYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVT 194
Query 178 KILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPS 237
+LN Q++ G +L+D +HP D+ K++EQLS+S+ A R++D KTG VK +
Sbjct 195 PVLNQPQSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLKTGT-VKKEGQQSSM 253
Query 238 RLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKK--------KADRKSFCTIHSTGYLK 289
R+C G+RRSF CRM+C SV + S + K F +H TGY+K
Sbjct 254 RMCMGSRRSFICRMRCGTSSVDPVSMNRLSFLRNRCRNGLGSVKEGEPHFVVVHCTGYIK 313
Query 290 SWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGK 349
+WPP + L +D+ +G CLVAIGRL P + + E++SRH I+G
Sbjct 314 AWPPAGVSLPDDDPEAGQGSKF-CLVAIGRLQVTSSPNCTDMSNICQPTEFISRHNIEGI 372
Query 350 FVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIK 409
F FVD R A + Y PQELLG + E+ H +D L + +QV++ + ++ + ++F+ K
Sbjct 373 FTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRAK 432
Query 410 DGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGD--PTFPQLTASPHSMDSML 467
+ ++ +R+ F+F NP++ E+ + TNT V + E Q + + + L
Sbjct 433 NREWLWMRTSSFTFQNPYSDEMSIFICTNTNVKNSSQEPRPTLSNTIQRSQLGPTTNLSL 492
Query 468 PSGEG 472
G G
Sbjct 493 EMGTG 497
>sp|O15945|ARNT_DROME Aryl hydrocarbon receptor nuclear translocator
homolog OS=Drosophila melanogaster OX=7227 GN=tgo PE=1
SV=3
Length=642
Score = 408 bits (1049), Expect = 1e-133, Method: Composition-based stats.
Identities = 166/385 (43%), Positives = 245/385 (64%), Gaps = 8/385 (2%)
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
E +RE H +IE+RRR+KM ++I EL+ +VPTC+A++RK DKLT+LRMAV
Sbjct 2 DEANIQDKERFASRENHCEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVA 61
Query 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
HMK LRG N ++ YKP+FL+D ELKHLIL AADGFLFVV CD G++++VS+SV +L
Sbjct 62 HMKALRGTGNTSSDGTYKPSFLTDQELKHLILEAADGFLFVVSCDSGRVIYVSDSVTPVL 121
Query 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
NY+Q+D G SL++++HP D K++EQLS+ ++ R++D K+G VK + RL
Sbjct 122 NYTQSDWYGTSLYEHIHPDDREKIREQLSTQESQNAGRILDLKSGT-VKKEGHQSSMRLS 180
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKA-----DRKSFCTIHSTGYLKSWPPTK 295
GARR F CRM+ + + + ++ + D ++ +H TGY+K+WPPT
Sbjct 181 MGARRGFICRMRVGNVNPESMVSGHLNRLKQRNSLGPSRDGTNYAVVHCTGYIKNWPPTD 240
Query 296 MGLDEDNEPD-NEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVD 354
M + E D ++ + CLVAIGRL + E+++RHA+DGKF FVD
Sbjct 241 MFPNMHMERDVDDMSSHCCLVAIGRLQVTSTAAN-DMSGSNNQSEFITRHAMDGKFTFVD 299
Query 355 QRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFI 414
QR IL Y P ELLG CY++FH +D H+ E QVL+ + ++ + Y+ + K+ ++
Sbjct 300 QRVLNILGYTPTELLGKICYDFFHPEDQSHMKESFDQVLKQKGQMFSLLYRARAKNSEYV 359
Query 415 TLRSRWFSFMNPWTKEVEYIVSTNT 439
LR++ ++F+NP+T EVEYIV TN+
Sbjct 360 WLRTQAYAFLNPYTDEVEYIVCTNS 384
>sp|Q9YIB9|HIF1A_CHICK Hypoxia-inducible factor 1-alpha OS=Gallus
gallus OX=9031 GN=HIF1A PE=2 SV=2
Length=811
Score = 358 bits (917), Expect = 3e-112, Method: Composition-based stats.
Identities = 103/387 (27%), Positives = 177/387 (46%), Gaps = 44/387 (11%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
+ +E + RR K + ELA +P + +S LDK +++R+ + +++ +
Sbjct 16 ERRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIMRLTISYLRMRK---- 71
Query 131 PYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQ 190
+ + EL L+A DGF+ V+ + G ++++SE+V K + +Q DL G
Sbjct 72 LLDAGELETEANMEKELNCFYLKALDGFVMVLS-EDGDMIYMSENVNKCMGLTQFDLTGH 130
Query 191 SLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCR 250
S+FD+ HP D +++E L+ + PVK RSFF R
Sbjct 131 SVFDFTHPCDHEELREMLTHRNG-------------PVKKGKEQ-------NTERSFFLR 170
Query 251 MKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCN 310
MKC S T + K A K +H TG+++ + +
Sbjct 171 MKCTLTSRG-------RTVNIKSATWK---VLHCTGHIRVYDTCNNQTH----CGYKKPP 216
Query 311 LSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLG 370
++CLV I +P P N E+ + S ++SRH++D KF + D+R T ++ Y P+ELLG
Sbjct 217 MTCLVLI----CEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query 371 TSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKE 430
S YEY+H D HL + H + T+ ++TT Y+ K G ++ + ++ N +
Sbjct 273 RSIYEYYHALDSDHLTKTHHDMF-TKGQVTTGQYRMLAKQGGYVWVETQATVIYNTKNSQ 331
Query 431 VEYIVSTNTVVLANVLEGGDPTFPQLT 457
+ IV N V+ V + + Q
Sbjct 332 PQCIVCVNYVLSGIVQKDLIFSLGQTE 358
>sp|Q309Z6|HIF1A_EOSFB Hypoxia-inducible factor 1-alpha OS=Eospalax
fontanierii baileyi OX=146132 GN=HIF1A PE=2 SV=1
Length=819
Score = 353 bits (904), Expect = 4e-110, Method: Composition-based stats.
Identities = 129/572 (23%), Positives = 228/572 (40%), Gaps = 89/572 (16%)
Query 58 HGRLEYTEHQGRI--KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVL 115
G E + R+ + +E + RR K + ELA +P + +S LDK +V+
Sbjct 2 EGAAGGEEKKNRMSSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVM 61
Query 116 RMAVQHMKTLR--GATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVS 173
R+ + +++ + A + E + K ++ L+A DGF+ V+ D G ++++S
Sbjct 62 RLTISYLRVRKLLDAGDLDIEDDMKA------QMNCFYLKALDGFVMVLT-DDGDMIYIS 114
Query 174 ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT 233
++V K + +Q +L G S+FD+ HP D +++E L+ + P+K
Sbjct 115 DNVNKYMGLTQFELTGHSVFDFTHPCDHEEMREMLTHRNG-------------PIKKGKE 161
Query 234 PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP 293
+RSFF RMKC S T + K A K +H TG++ +
Sbjct 162 Q-------NTQRSFFLRMKCTLTSRG-------RTMNIKSATWK---VLHCTGHIHVYD- 203
Query 294 TKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFV 353
+ + ++CLV I +P P N EI + S ++SRH++D KF +
Sbjct 204 ---TNSNQPQCGYKKPPMTCLVLI----CEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYC 256
Query 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 413
D+R T ++ Y P+ELLG S YEY+H D HL + H + T+ ++TT Y+ K G +
Sbjct 257 DERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMF-TKGQVTTGQYRMLAKRGGY 315
Query 414 ITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQ-------LTASPHSMDSM 466
+ + ++ N + + IV N VV + + Q + +S M +
Sbjct 316 VWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTECVLKPVESSDMKMTQL 375
Query 467 LPSGEGGPKRTH----------PTVPGIPGGTR---AGAGKIGRMIAEEIMEIHRIRGS- 512
E T+ G G ++ +E +
Sbjct 376 FTKVESEDTSCLFDKLKKEPDALTLLAPAAGDTIISLDFGSDDTETEDQQLEDVPLYNDV 435
Query 513 --SPSSCGSSPLNITSTPPPDASSP----------GGKKILNGGTPDIPSSGL--LSGQA 558
S + +N+ +P P + +P +++ P+ S L Q
Sbjct 436 MFPSSDDKLTSINLAMSPLPASETPKPLRSNADPALNQEVALKLEPNAESLELSFTMPQI 495
Query 559 QENPGYP----YSDSSSILGENPHIGIDMIDN 586
Q+ P P SS D+ +
Sbjct 496 QDQPASPSDGSTRQSSPEPNSPSEYCFDVDSD 527
>sp|Q61221|HIF1A_MOUSE Hypoxia-inducible factor 1-alpha OS=Mus
musculus OX=10090 GN=Hif1a PE=1 SV=3
Length=836
Score = 351 bits (901), Expect = 1e-109, Method: Composition-based stats.
Identities = 119/531 (22%), Positives = 216/531 (41%), Gaps = 73/531 (14%)
Query 62 EYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQH 121
E + + + +E + RR K + ELA +P + +S LDK +V+R+ + +
Sbjct 7 ENEKKKMSSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVMRLTISY 66
Query 122 MKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILN 181
++ + ++ L+A DGF+ V+ D G ++++S++V K +
Sbjct 67 LRVRK----LLDAGGLDSEDEMKAQMDCFYLKALDGFVMVLT-DDGDMVYISDNVNKYMG 121
Query 182 YSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCS 241
+Q +L G S+FD+ HP D +++E L+ + R+
Sbjct 122 LTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKG--------------------KEL 161
Query 242 GARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDED 301
+RSFF RMKC S T + K A K +H TG++ +
Sbjct 162 NTQRSFFLRMKCTLTSRG-------RTMNIKSATWK---VLHCTGHIHVYD----TNSNQ 207
Query 302 NEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAIL 361
+ + ++CLV I +P P N EI + S ++SRH++D KF + D+R T ++
Sbjct 208 PQCGYKKPPMTCLVLI----CEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELM 263
Query 362 AYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWF 421
Y P+ELLG S YEY+H D HL + H + T+ ++TT Y+ K G ++ + ++
Sbjct 264 GYEPEELLGRSIYEYYHALDSDHLTKTHHDMF-TKGQVTTGQYRMLAKRGGYVWVETQAT 322
Query 422 SFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTA------SPHSMDSMLPSGEGGPK 475
N + + IV N VV + + Q + S + L +
Sbjct 323 VIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTESVLKPVESSDMKMTQLFTKVESED 382
Query 476 RTH-----------PTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSS-------PSSC 517
+ T+ G + G + E ++ PSS
Sbjct 383 TSCLFDKLKKEPDALTLLAPAAGDTIISLDFGSD--DTETEDQQLEDVPLYNDVMFPSSN 440
Query 518 GSSPLNITSTPPPDASSPGGKKILNGGTPDIPSS-GLLSGQAQENPGYPYS 567
+N+ +P P + +P K + + P + L + E+ G ++
Sbjct 441 EKLNINLAMSPLPSSETP--KPLRSSADPALNQEVALKLESSPESLGLSFT 489
>sp|Q0PGG7|HIF1A_BOSMU Hypoxia-inducible factor 1-alpha OS=Bos
mutus grunniens OX=30521 GN=HIF1A PE=2 SV=1
Length=823
Score = 350 bits (898), Expect = 3e-109, Method: Composition-based stats.
Identities = 125/552 (23%), Positives = 221/552 (40%), Gaps = 83/552 (15%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
+ +E + RR K + ELA +P + +S LDK +V+R+ + +++ +
Sbjct 16 ERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVMRLTISYLRVRK---- 71
Query 131 PYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQ 190
+ ++ L+A DGF+ V+ D G ++++S++V K + +Q +L G
Sbjct 72 LLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLT-DDGDMIYISDNVNKYMGLTQFELTGH 130
Query 191 SLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCR 250
S+FD+ HP D +++E L+ + GL K +RSFF R
Sbjct 131 SVFDFTHPCDHEEMREMLTH------------RNGLVKKGKEQ--------NTQRSFFLR 170
Query 251 MKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCN 310
MKC S T + K A K +H TG++ + ++ +
Sbjct 171 MKCTLTSRG-------RTMNIKSATWK---VLHCTGHIHVYD----TNSNQSQCGYKKPP 216
Query 311 LSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLG 370
++CLV I +P P N EI + S ++SRH++D KF + D+R T ++ Y P+ELLG
Sbjct 217 MTCLVLI----CEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query 371 TSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKE 430
S YEY+H D HL + H + T+ ++TT Y+ K G ++ + ++ N +
Sbjct 273 RSIYEYYHALDSDHLTKTHHDMF-TKGQVTTGQYRMLAKKGGYVWIETQATVIYNTKNSQ 331
Query 431 VEYIVSTNTVVLANVLEGGDPTFPQ-------LTASPHSMDSMLPSGEGGPKRTH----- 478
+ IV N VV + + Q + +S M + E +
Sbjct 332 PQCIVCVNYVVSGIIQHDLIFSLQQTECVLKPVESSDMKMTQLFTKVESEDTSSLFDKLK 391
Query 479 -----PTVPGIPGGTR---AGAGKIGRMIAEEIMEIHRIRGS---SPSSCGSSPLNITST 527
T+ G G ++ +E + S+ +N+ +
Sbjct 392 KEPDALTLLAPAAGDTIISLDFGSNDTETDDQQLEEVPLYNDVMLPSSNEKLQNINLAMS 451
Query 528 PPPDASSP----------GGKKILNGGTPDIPSSGL--LSGQAQENPGYP----YSDSSS 571
P P + +P +++ P+ S GL Q Q+ P P SS
Sbjct 452 PLPASETPKPLRSSADPALNQEVALKLEPNPESLGLSFTMPQIQDQPASPSDGSTRQSSP 511
Query 572 ILGENPHIGIDM 583
D+
Sbjct 512 EPNSPSEYCFDV 523
>sp|O35800|HIF1A_RAT Hypoxia-inducible factor 1-alpha OS=Rattus
norvegicus OX=10116 GN=Hif1a PE=2 SV=1
Length=825
Score = 349 bits (895), Expect = 1e-108, Method: Composition-based stats.
Identities = 122/565 (22%), Positives = 219/565 (39%), Gaps = 86/565 (15%)
Query 62 EYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQH 121
E + + + +E + RR K + ELA +P + +S LDK +V+R+ + +
Sbjct 7 ENEKKKMSSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVMRLTISY 66
Query 122 MKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILN 181
++ + + ++ L+A DGF+ V+ D G ++++S++V K +
Sbjct 67 LRVRK----LLDAGDLDIEDEMKAQMNCFYLKAPDGFVMVLT-DDGDMIYISDNVNKYMG 121
Query 182 YSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCS 241
+Q +L G S+FD+ HP D +++E L+ + R+
Sbjct 122 LTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVRKGK--------------------EQ 161
Query 242 GARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDED 301
+RSFF RMKC S T + K A K +H TG++ +
Sbjct 162 NTQRSFFLRMKCTLTSRG-------RTMNIKSATWK---VLHCTGHIHVYD----TSSNQ 207
Query 302 NEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAIL 361
+ + ++CLV I +P P N EI + S ++SRH++D KF + D+R T ++
Sbjct 208 PQCGYKKPPMTCLVLI----CEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELM 263
Query 362 AYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWF 421
Y P+ELLG S YEY+H D HL + H + T+ ++TT Y+ K G ++ + ++
Sbjct 264 GYEPEELLGRSIYEYYHALDSDHLTKTHHDMF-TKGQVTTGQYRMLAKRGGYVWVETQAT 322
Query 422 SFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTA------SPHSMDSMLPSGEGGPK 475
N + + IV N VV + + Q + S + L +
Sbjct 323 VIYNTKDSQPQCIVCVNYVVSGIIQHDLIFSLQQTESVLKPVESSDMKMTQLFTKVESED 382
Query 476 RTH-----------PTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSS-------PSSC 517
+ T+ G + G + E ++ PSS
Sbjct 383 TSCLFDKLKKEPDALTLLAPAAGDTIISLDFGSD--DTETEDQQLEDVPLYNDVMFPSSN 440
Query 518 GSSPLNITSTPPPDASSP------------GGKKILNGGTPDIPSSGLLSGQAQENPGYP 565
+N+ +P P + +P + +P+ Q Q+ P P
Sbjct 441 EKLNINLAMSPLPASETPKPLRSSADPALNQEVALKLESSPESLGLSFTMPQIQDQPASP 500
Query 566 ----YSDSSSILGENPHIGIDMIDN 586
SS D+ +
Sbjct 501 SDGSTRQSSPEPNSPSEYCFDVDSD 525
>sp|Q16665|HIF1A_HUMAN Hypoxia-inducible factor 1-alpha OS=Homo
sapiens OX=9606 GN=HIF1A PE=1 SV=1
Length=826
Score = 349 bits (895), Expect = 1e-108, Method: Composition-based stats.
Identities = 104/375 (28%), Positives = 177/375 (47%), Gaps = 48/375 (13%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR--GA 128
+ +E + RR K + ELA +P + +S LDK +V+R+ + +++ + A
Sbjct 16 ERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVMRLTISYLRVRKLLDA 75
Query 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
+ E + K ++ L+A DGF+ V+ D G ++++S++V K + +Q +L
Sbjct 76 GDLDIEDDMKA------QMNCFYLKALDGFVMVLT-DDGDMIYISDNVNKYMGLTQFELT 128
Query 189 GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFF 248
G S+FD+ HP D +++E L+ + GL K +RSFF
Sbjct 129 GHSVFDFTHPCDHEEMREMLTH------------RNGLVKKGKEQ--------NTQRSFF 168
Query 249 CRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEG 308
RMKC S T + K A K +H TG++ + + +
Sbjct 169 LRMKCTLTSRG-------RTMNIKSATWK---VLHCTGHIHVYD----TNSNQPQCGYKK 214
Query 309 CNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQEL 368
++CLV I +P P N EI + S ++SRH++D KF + D+R T ++ Y P+EL
Sbjct 215 PPMTCLVLI----CEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEEL 270
Query 369 LGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWT 428
LG S YEY+H D HL + H + T+ ++TT Y+ K G ++ + ++ N
Sbjct 271 LGRSIYEYYHALDSDHLTKTHHDMF-TKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKN 329
Query 429 KEVEYIVSTNTVVLA 443
+ + IV N VV
Sbjct 330 SQPQCIVCVNYVVSG 344
>sp|Q9XTA5|HIF1A_BOVIN Hypoxia-inducible factor 1-alpha OS=Bos
taurus OX=9913 GN=HIF1A PE=2 SV=1
Length=823
Score = 349 bits (894), Expect = 1e-108, Method: Composition-based stats.
Identities = 126/556 (23%), Positives = 223/556 (40%), Gaps = 85/556 (15%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
+ +E + RR K + ELA +P + +S LDK +V+R+ + +++ +
Sbjct 16 ERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVMRLTISYLRVRK---- 71
Query 131 PYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQ 190
+ ++ L+A DGF+ V+ D G ++++S++V K + +Q +L G
Sbjct 72 LLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLT-DDGDMIYISDNVNKYMGLTQFELTGH 130
Query 191 SLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCR 250
S+FD+ HP D +++E L+ + GL K +RSFF R
Sbjct 131 SVFDFTHPCDHEEMREMLTH------------RNGLVKKGKEQ--------NTQRSFFLR 170
Query 251 MKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCN 310
MKC S T + K A K +H TG++ + ++ +
Sbjct 171 MKCTLTSRG-------RTMNIKSATWK---VLHCTGHIHVYD----TNSNQSQCGYKKPP 216
Query 311 LSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLG 370
++CLV I +P P N EI + S ++SRH++D KF + D+R T ++ Y P+ELLG
Sbjct 217 MTCLVLI----CEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLG 272
Query 371 TSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKE 430
S YEY+H D HL + H + T+ ++TT Y+ K G ++ + ++ N +
Sbjct 273 RSIYEYYHALDSDHLTKTHHDMF-TKGQVTTGQYRMLAKRGGYVWIETQATVIYNTKNSQ 331
Query 431 VEYIVSTNTVVLANVLEGGDPTFPQ-------LTASPHSMDSMLPSGEGGPKRTH----- 478
+ IV N VV + + Q + +S M + E +
Sbjct 332 PQCIVCVNYVVSGIIQHDLIFSLQQTECVLKPVESSDMKMTQLFTKVESEDTSSLFDKLK 391
Query 479 -----PTVPGIPGGTR---AGAGKIGRMIAEEIMEIHRIRGS---SPSSCGSSPLNITST 527
T+ G G ++ +E + S+ +N+ +
Sbjct 392 KEPDALTLLAPAAGDTIISLDFGSNDTETDDQQLEEVPLYNDVMLPSSNEKLQNINLAMS 451
Query 528 PPPDASSP----------GGKKILNGGTPDIPSSGLLS---GQAQENPGYP----YSDSS 570
P P + +P +++ P+ P S LS Q Q+ P P SS
Sbjct 452 PLPASETPKPLRSSADPALNQEVALKLEPN-PESLELSFTMPQIQDQPASPSDGSTRQSS 510
Query 571 SILGENPHIGIDMIDN 586
D+ +
Sbjct 511 PEPNSPSEYCFDVDSD 526
>sp|O02219|AHA1_CAEEL Aryl hydrocarbon receptor nuclear translocator
homolog OS=Caenorhabditis elegans OX=6239 GN=aha-1 PE=1
SV=1
Length=453
Score = 336 bits (861), Expect = 4e-108, Method: Composition-based stats.
Identities = 139/453 (31%), Positives = 227/453 (50%), Gaps = 30/453 (7%)
Query 39 RKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASL 98
+ +S ++ + R+E + + + ARE HS+IE+RRR+KM +I+ELA +
Sbjct 11 QSATSFAMEDEDMGMPSGKYARMEDEMGENKERFARENHSEIERRRRNKMTHYINELAEM 70
Query 99 VPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGF 158
VP C ++ RK DKLT+LRMAV HMK +RG T E +YKP+FL+D ELKHLIL AA+GF
Sbjct 71 VPQCASLGRKPDKLTILRMAVSHMKGIRGHT-AQDETSYKPSFLTDQELKHLILEAANGF 129
Query 159 LFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRER 218
LFVV C GK+L+V++S+ +LN Q D + ++L + +HP D K+++QL S+ + +
Sbjct 130 LFVVCCQTGKVLYVADSITPVLNLKQEDWLQRNLNELIHPDDQDKIRDQLCGSEVSV-NK 188
Query 219 LIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKS 278
++D K+G +R+ RR F CRM+ + + ++
Sbjct 189 VLDLKSG---SVKREGASTRVHMSCRRGFICRMRVGALEPL---HRLRNRRPLFQHAGQN 242
Query 279 FCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSM 338
+ +H TGY+K+ PP + SCLVAI RL +P + +
Sbjct 243 YVVMHCTGYIKNAPPQGINAPAS----------SCLVAIARLQVASMPVCAD---PTSTN 289
Query 339 EYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREK 398
++ R + DGK F+D R + ++ +L+G + H D L + +L + +
Sbjct 290 QFSVRVSEDGKMTFIDARVSDLIGLSSDQLIGRYWWNLAHPADEKTLQDSFVALL-SDQP 348
Query 399 ITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGD--PTFPQL 456
+ N + + +I + FMNP++++ EY+V+T+ + + PT PQ
Sbjct 349 MRIN-IRVRTST-DYIPCTVSAYKFMNPYSEQFEYVVATHQIAPQEDINNWVTAPTVPQP 406
Query 457 TASPHSMDSMLPSGEGGPKRTH----PTVPGIP 485
AS PS + + P G P
Sbjct 407 QASEFGELGGAPSAVDYGQSSSGGWRPEAQGAP 439
>sp|Q24119|TRH_DROME Protein trachealess OS=Drosophila melanogaster
OX=7227 GN=trh PE=1 SV=4
Length=1022
Score = 350 bits (897), Expect = 3e-107, Method: Composition-based stats.
Identities = 122/539 (23%), Positives = 206/539 (38%), Gaps = 73/539 (14%)
Query 70 IKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGAT 129
++ +E + RR K N ELA ++P A++ +LDK +++R+ + ++K +
Sbjct 84 LELRKEKSRDAARSRRGKENYEFYELAKMLPLPAAITSQLDKASIIRLTISYLKLRDFSG 143
Query 130 NPYTEANYK----------------PTFLSDDELKHLILRAADGFLFVVGCDRGKILFVS 173
+ + L + IL++ DGF V D G+ L++S
Sbjct 144 HGDPPWTREASSSSKLKSAAIRRSPAVDLFEQHQGTHILQSLDGFALAVAAD-GRFLYIS 202
Query 174 ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT 233
E+V L SQ ++ G S+FDY+H D +++ +QL S T+ + +
Sbjct 203 ETVSIYLGLSQVEMTGSSIFDYIHQADHSEIADQLGLSLTSGGGGGGGSSSSGGGGGGAG 262
Query 234 PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADR-----------KSFCTI 282
G + SGA N P V ST K DR K C
Sbjct 263 GGMASPTSGASDDGSGTHGTNNPDVAASMTQA-STSGYKGYDRSFCVRMKSTLTKRGCHF 321
Query 283 HSTGYLKS-----WPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVV------------ 325
S+GY S + N G N S ++ + +L
Sbjct 322 KSSGYRASDATSNCNNGNNASNNAKNVKNPGSNYSVVLLLCKLRPQYTFSHSRKSQPPLL 381
Query 326 ---------PQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEY 376
P P EIR++ +V+R D + + R + +L Y P++L+ S Y
Sbjct 382 GMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEPRVSDLLDYSPEDLVNKSLYSL 441
Query 377 FHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVS 436
H +D L + H ++ + ++ T Y+ K G + L++ + + + I+
Sbjct 442 CHAEDANRLRKSHSDLI-EKGQVLTGYYRLMNKSGGYTWLQTCATVVCSTKNADEQNIIC 500
Query 437 TNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAG--- 493
N V+ E QL SP S+ G G K + G PGG +G G
Sbjct 501 VNYVISNRENENMILDCCQLEPSPDSIKHE--EGLGNDKSS-----GSPGGDASGEGNSH 553
Query 494 ------KIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGGTP 546
K+ + HR RG S ++ S +N + T D+ +P G +I +G P
Sbjct 554 LSAGDMKLNSPKTDSEGHSHRGRGRSAAASHGSSMN-SLTMIKDSPTPLGVEIDSGVLP 611
>sp|Q99814|EPAS1_HUMAN Endothelial PAS domain-containing protein
1 OS=Homo sapiens OX=9606 GN=EPAS1 PE=1 SV=3
Length=870
Score = 344 bits (881), Expect = 3e-106, Method: Composition-based stats.
Identities = 104/392 (27%), Positives = 187/392 (48%), Gaps = 45/392 (11%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMK 123
+ + + +E + RR K ELA +P +++S LDK +++R+A+ ++
Sbjct 6 EKKRSSSERRKEKSRDAARCRRSKETEVFYELAHELPLPHSVSSHLDKASIMRLAISFLR 65
Query 124 TLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYS 183
T + ++ +E + +D ++ +L L+A +GF+ VV D G ++F+SE++ K + +
Sbjct 66 THKLLSSVCSENESEAE--ADQQMDNLYLKALEGFIAVVTQD-GDMIFLSENISKFMGLT 122
Query 184 QNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGA 243
Q +L G S+FD+ HP D +++E LS +K G
Sbjct 123 QVELTGHSIFDFTHPCDHEEIRENLS------------------LKNGSGFGKKSKDMST 164
Query 244 RRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWP--PTKMGLDED 301
R FF RMKC + T + K A K +H TG +K + P L
Sbjct 165 ERDFFMRMKCTVT-------NRGRTVNLKSATWK---VLHCTGQVKVYNNCPPHNSLCGY 214
Query 302 NEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAIL 361
EP LSCL+ + + P + +I + S ++SRH++D KF + D R T ++
Sbjct 215 KEP-----LLSCLIIM----CEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRITELI 265
Query 362 AYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWF 421
Y P+ELLG S YE++H D ++ + H+ + T+ ++ + Y+ K G ++ L ++
Sbjct 266 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC-TKGQVVSGQYRMLAKHGGYVWLETQGT 324
Query 422 SFMNPWTKEVEYIVSTNTVVLANVLEGGDPTF 453
NP + + I+ N V+ + +E D F
Sbjct 325 VIYNPRNLQPQCIMCVNYVL--SEIEKNDVVF 354
>sp|A1YFY6|SIM1_PANPA Single-minded homolog 1 OS=Pan paniscus
OX=9597 GN=SIM1 PE=3 SV=1
Length=766
Score = 333 bits (854), Expect = 2e-103, Method: Composition-based stats.
Identities = 108/401 (27%), Positives = 182/401 (45%), Gaps = 47/401 (12%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL----RGAT 129
+E + RR+K NS ELA L+P +A++ +LDK +++R+ ++K G
Sbjct 2 KEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGLG 61
Query 130 NPYTEANY-KPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
+ +++ P EL +L+ DGF+FVV D GKI+++SE+ L SQ +L
Sbjct 62 EAWGHSSWTSPLDNVGRELGSHLLQTLDGFIFVVAPD-GKIMYISETASVHLGLSQVELT 120
Query 189 GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFF 248
G S+++Y+HP D ++ L++ + + + RSFF
Sbjct 121 GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYE-------------------IERSFF 161
Query 249 CRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEG 308
RMKC + ++ TC + IH +GYLK + D N G
Sbjct 162 LRMKC-----VLAKRNAGLTCG-------GYKVIHCSGYLKIRQYSLDMSPFDGCYQNVG 209
Query 309 CNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQEL 368
LVA+G H +P EI++ S ++ R ++D K +F+D R + Y PQ+L
Sbjct 210 -----LVAVG----HSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDL 260
Query 369 LGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWT 428
+ + Y + H D HL H +L + ++TT Y+F K G ++ ++S N +
Sbjct 261 IEKTLYHHVHGCDTFHLRCAHH-LLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRS 319
Query 429 KEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPS 469
IVS N V+ +G + Q++AS + S
Sbjct 320 SRPHCIVSVNYVLTDTEYKGLQLSLDQISASKPAFSYTSSS 360
>sp|P97481|EPAS1_MOUSE Endothelial PAS domain-containing protein
1 OS=Mus musculus OX=10090 GN=Epas1 PE=1 SV=2
Length=874
Score = 335 bits (859), Expect = 5e-103, Method: Composition-based stats.
Identities = 124/502 (25%), Positives = 217/502 (43%), Gaps = 57/502 (11%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMK 123
+ + + +E + RR K ELA +P +++S LDK +++R+A+ ++
Sbjct 6 EKKRSSSELRKEKSRDAARCRRSKETEVFYELAHELPLPHSVSSHLDKASIMRLAISFLR 65
Query 124 TLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYS 183
T + ++ +E + +D ++ +L L+A +GF+ VV D G ++F+SE++ K + +
Sbjct 66 THKLLSSVCSENESEAE--ADQQMDNLYLKALEGFIAVVTQD-GDMIFLSENISKFMGLT 122
Query 184 QNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGA 243
Q +L G S+FD+ HP D +++E L+ +K G
Sbjct 123 QVELTGHSIFDFTHPCDHEEIRENLT------------------LKNGSGFGKKSKDVST 164
Query 244 RRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWP--PTKMGLDED 301
R FF RMKC + T + K A K +H TG ++ + P L
Sbjct 165 ERDFFMRMKCTVT-------NRGRTVNLKSATWK---VLHCTGQVRVYNNCPPHSSLCGS 214
Query 302 NEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAIL 361
EP LSCL+ + + P + +I + S ++SRH++D KF + D R ++
Sbjct 215 KEP-----LLSCLIIM----CEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELI 265
Query 362 AYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWF 421
Y P+ELLG S YE++H D ++ + H+ + T+ ++ + Y+ K G ++ L ++
Sbjct 266 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC-TKGQVVSGQYRMLAKHGGYVWLETQGT 324
Query 422 SFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTV 481
NP + + I+ N V+ + +E D F SMD P
Sbjct 325 VIYNPRNLQPQCIMCVNYVL--SEIEKNDVVF--------SMDQT--ESLFKPHLMAMNS 372
Query 482 PGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKIL 541
A K + + E + +P+ + + D S GK IL
Sbjct 373 IFDSSDDVAVTEKSNYLFTKLKEEPEELAQLAPTPGDAIISLDFGSQNFDEPSAYGKAIL 432
Query 542 NGGTPDIPSSGLLSGQAQENPG 563
G P + SGL S AQ G
Sbjct 433 PPGQPWV--SGLRSHSAQSESG 452
>sp|Q9JHS1|EPAS1_RAT Endothelial PAS domain-containing protein
1 OS=Rattus norvegicus OX=10116 GN=Epas1 PE=2 SV=1
Length=874
Score = 334 bits (857), Expect = 9e-103, Method: Composition-based stats.
Identities = 100/399 (25%), Positives = 185/399 (46%), Gaps = 43/399 (11%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMK 123
+ + + +E + RR K ELA +P +++S LDK +++R+A+ ++
Sbjct 6 EKKRSSSELRKEKSRDAARCRRSKETEVFYELAHELPLPHSVSSHLDKASIMRLAISFLR 65
Query 124 TLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYS 183
T + ++ +E + +D ++ +L L+A +GF+ VV D G ++F+SE++ K + +
Sbjct 66 THKLLSSVCSENESEAE--ADQQMDNLYLKALEGFIAVVTQD-GDMIFLSENISKFMGLT 122
Query 184 QNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGA 243
Q +L G S+FD+ HP D +++E L+ +KT G
Sbjct 123 QVELTGHSIFDFTHPCDHEEIRENLT------------------LKTGSGFGKKNKDRST 164
Query 244 RRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWP--PTKMGLDED 301
R FF RMKC + T + K A K +H TG ++ + P L
Sbjct 165 ERDFFMRMKCTVT-------NRGRTVNLKSATWK---VLHCTGQVRVYNNCPPHSSLCGY 214
Query 302 NEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAIL 361
EP LSCL+ + + P + +I + S ++SRH++D KF + D R ++
Sbjct 215 KEP-----LLSCLIIM----CEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELV 265
Query 362 AYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWF 421
Y P+ELLG S YE++H D ++ + H+ + T+ ++ + Y+ K G ++ L ++
Sbjct 266 GYHPEELLGRSAYEFYHALDSENMTKSHQNLC-TKGQVVSGQYRMLAKHGGYVWLETQGT 324
Query 422 SFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASP 460
NP + + I+ N V+ + Q +
Sbjct 325 VVYNPRNLQPQCIMCVNYVLSEIEKNDVVVSMDQTESCS 363
>sp|Q98SJ5|SIM1A_DANRE Single-minded homolog 1-A OS=Danio rerio
OX=7955 GN=sim1a PE=2 SV=1
Length=745
Score = 331 bits (847), Expect = 1e-102, Method: Composition-based stats.
Identities = 123/505 (24%), Positives = 205/505 (41%), Gaps = 51/505 (10%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
+E + RR+K NS ELA L+P +A++ + DK +++R+ ++K
Sbjct 2 KEKSKNAGRTRREKENSEFYELAKLLPLPSAITSQSDKASIIRLTTSYLKMRIVFPEGLG 61
Query 134 EAN---YKPTFLSDD--ELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
E+ + T L + EL +L+ DGF+FVV D GKIL++SE+ L SQ +L
Sbjct 62 ESWGHVSRTTSLENVGRELGSHLLQTLDGFIFVVAPD-GKILYISETASVHLGLSQEELT 120
Query 189 GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFF 248
G S+++Y+HP D ++ L++ + + + RSFF
Sbjct 121 GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVHEYE-------------------MERSFF 161
Query 249 CRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEG 308
RMKC + + TC + IH +GYLK + D N G
Sbjct 162 LRMKC-----VLAKANAGLTCG-------GYKVIHCSGYLKIRQYSLDMSPFDGCYQNVG 209
Query 309 CNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQEL 368
LVA+G H +P EI++ S ++ R ++D K +F+D R + Y PQ+L
Sbjct 210 -----LVAVG----HSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDL 260
Query 369 LGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWT 428
+ + Y + H D HL H +L + ++TT Y+F K G ++ ++S N +
Sbjct 261 IEKTLYHHVHSCDTFHLRCAHH-LLLVKGQVTTKYYRFLAKQGGWVWVQSYATIVHNSRS 319
Query 429 KEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSG--EGGPKRTHPTVPGIPG 486
IVS N V+ +G + Q ++ S PS + V
Sbjct 320 SRPHCIVSVNYVLTDTEYKGLQLSLDQAASTKPSFTYNSPSNPVTENRRVGKSRVSRTKT 379
Query 487 GTRAGAGKI--GRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGG 544
TR G + G SP + +SP + ++S +
Sbjct 380 KTRLSPYSQYPGFPTDRSESDQDSPWGGSPLTDSASPQLLEQCEGIESSCVYRQFSDPRS 439
Query 545 TPDIPSSGLLSGQAQENPGYPYSDS 569
+ E +P+S+S
Sbjct 440 LCYGLPLTEDHHTSNELYSHPHSES 464
>sp|A2T6X9|SIM1_PANTR Single-minded homolog 1 OS=Pan troglodytes
OX=9598 GN=SIM1 PE=3 SV=1
Length=766
Score = 330 bits (846), Expect = 3e-102, Method: Composition-based stats.
Identities = 109/401 (27%), Positives = 180/401 (45%), Gaps = 47/401 (12%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
+E + RR+K NS ELA L+P +A++ +LDK +++R+ ++K
Sbjct 2 KEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGLG 61
Query 134 EANYKPTFLS-----DDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
EA + S EL +L+ DGF+FVV D GKI+++SE+ L SQ +L
Sbjct 62 EAWGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPD-GKIMYISETASVHLGLSQVELT 120
Query 189 GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFF 248
G S+++Y+HP D ++ L++ + + + RSFF
Sbjct 121 GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYE-------------------IERSFF 161
Query 249 CRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEG 308
RMKC + ++ TC + IH +GYLK + D N G
Sbjct 162 LRMKC-----VLAKRNAGLTCG-------GYKVIHCSGYLKIRQYSLDMSPFDGCYQNVG 209
Query 309 CNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQEL 368
LVA+G H +P EI++ S ++ R ++D K +F+D R + Y PQ+L
Sbjct 210 -----LVAVG----HSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDL 260
Query 369 LGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWT 428
+ + Y + H D HL H +L + ++TT Y+F K G ++ ++S N +
Sbjct 261 IEKTLYHHVHGCDTFHLRCAHH-LLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRS 319
Query 429 KEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPS 469
IVS N V+ +G + Q++AS + S
Sbjct 320 SRPHCIVSVNYVLTDTEYKGLQLSLDQISASKPAFSYTSSS 360
>sp|P81133|SIM1_HUMAN Single-minded homolog 1 OS=Homo sapiens
OX=9606 GN=SIM1 PE=1 SV=2
Length=766
Score = 330 bits (846), Expect = 3e-102, Method: Composition-based stats.
Identities = 109/401 (27%), Positives = 180/401 (45%), Gaps = 47/401 (12%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
+E + RR+K NS ELA L+P +A++ +LDK +++R+ ++K
Sbjct 2 KEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGLG 61
Query 134 EANYKPTFLS-----DDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
EA + S EL +L+ DGF+FVV D GKI+++SE+ L SQ +L
Sbjct 62 EAWGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPD-GKIMYISETASVHLGLSQVELT 120
Query 189 GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFF 248
G S+++Y+HP D ++ L++ + + + RSFF
Sbjct 121 GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYE-------------------IERSFF 161
Query 249 CRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEG 308
RMKC + ++ TC + IH +GYLK + D N G
Sbjct 162 LRMKC-----VLAKRNAGLTCG-------GYKVIHCSGYLKIRQYSLDMSPFDGCYQNVG 209
Query 309 CNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQEL 368
LVA+G H +P EI++ S ++ R ++D K +F+D R + Y PQ+L
Sbjct 210 -----LVAVG----HSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDL 260
Query 369 LGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWT 428
+ + Y + H D HL H +L + ++TT Y+F K G ++ ++S N +
Sbjct 261 IEKTLYHHVHGCDTFHLRCAHH-LLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRS 319
Query 429 KEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPS 469
IVS N V+ +G + Q++AS + S
Sbjct 320 SRPHCIVSVNYVLTDTEYKGLQLSLDQISASKPAFSYTSSS 360
>sp|Q61045|SIM1_MOUSE Single-minded homolog 1 OS=Mus musculus
OX=10090 GN=Sim1 PE=1 SV=3
Length=765
Score = 329 bits (844), Expect = 7e-102, Method: Composition-based stats.
Identities = 109/401 (27%), Positives = 179/401 (45%), Gaps = 47/401 (12%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
+E + RR+K NS ELA L+P +A++ +LDK +++R+ ++K
Sbjct 2 KEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGLG 61
Query 134 EANY-----KPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
EA P EL +L+ DGF+FVV D GKI+++SE+ L SQ +L
Sbjct 62 EAWGHTSRTSPLDNVGRELGSHLLQTLDGFIFVVAPD-GKIMYISETASVHLGLSQVELT 120
Query 189 GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFF 248
G S+++Y+HP D ++ L++ + + + RSFF
Sbjct 121 GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYE-------------------IERSFF 161
Query 249 CRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEG 308
RMKC + ++ TC + IH +GYLK + D N G
Sbjct 162 LRMKC-----VLAKRNAGLTCG-------GYKVIHCSGYLKIRQYSLDMSPFDGCYQNVG 209
Query 309 CNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQEL 368
LVA+G H +P EI++ S ++ R ++D K +F+D R + Y PQ+L
Sbjct 210 -----LVAVG----HSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDL 260
Query 369 LGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWT 428
+ + Y + H D HL H +L + ++TT Y+F K G ++ ++S N +
Sbjct 261 IEKTLYHHVHGCDTFHLRCAHH-LLLVKGQVTTKYYRFLAKQGGWVWVQSYATIVHNSRS 319
Query 429 KEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPS 469
IVS N V+ +G + Q++AS + S
Sbjct 320 SRPHCIVSVNYVLTDTEYKGLQLSLDQISASKPTFSYTSSS 360
>sp|Q6YGZ4|CLOCK_TYTAL Circadian locomoter output cycles protein
kaput OS=Tyto alba OX=56313 GN=CLOCK PE=2 SV=1
Length=851
Score = 325 bits (832), Expect = 2e-99, Method: Composition-based stats.
Identities = 116/443 (26%), Positives = 201/443 (45%), Gaps = 51/443 (12%)
Query 44 TDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCN 103
+ ++ S D++D E + K R + ++ EK+RRD+ N I EL S++P
Sbjct 6 STHKMSSIADRNDGSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSMLP--- 62
Query 104 AMSRKLDKLTVLRMAVQHMKTLR----GATNPYTEANYKPTFLSDDELKHLILRAADGFL 159
+RK+DK TVL+ ++ ++ + + ++KPTFLS++E L+L A DGF
Sbjct 63 GNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEALDGFF 122
Query 160 FVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERL 219
+ D G I++VSES+ +L + +DL+ QS+F+++ + +++ + LSS
Sbjct 123 LAIMTD-GNIIYVSESITPLLEHLPSDLVDQSVFNFIPEGEHSEIYKILSSHLL------ 175
Query 220 IDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSF 279
+ P L S + F C M K + ++
Sbjct 176 ----------ESDSLTPEYLKSKNQLEFCCHMLRGTIDPKEQ---------------PTY 210
Query 280 CTIHSTGYLK----SWPPTKMGLDEDNEPDNEGC--NLSCLVAIGRLHSHVVPQPVNGEI 333
+ G K G + + + + C VA RL PQ +
Sbjct 211 EYVKFIGNFKCLNNVPNSAHNGFEGTIQRSHRPSYEDKVCFVATVRL---ATPQFIKEMC 267
Query 334 RVK--SMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQ 391
V+ + E+ SRH+++ KF+F+D RA I+ YLP E+LGTS Y+Y+H DD+ +LA+CH
Sbjct 268 TVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHEH 327
Query 392 VLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDP 451
++Q K + Y+F K +I L++ ++ + W E+IV T+TVV +
Sbjct 328 LMQY-GKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERR 386
Query 452 TFPQLTASPHSMDSMLPSGEGGP 474
+ S + G
Sbjct 387 RELGIEESLPEITGDKSQDSGSD 409
>sp|P05709|SIM_DROME Protein single-minded OS=Drosophila melanogaster
OX=7227 GN=sim PE=1 SV=3
Length=697
Score = 321 bits (821), Expect = 3e-99, Method: Composition-based stats.
Identities = 105/392 (27%), Positives = 172/392 (44%), Gaps = 33/392 (8%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
+E + RR+K N+ ELA L+P A++ +LDK +V+R+ ++K + +
Sbjct 26 KEKSKNAARTRREKENTEFCELAKLLPLPAAITSQLDKASVIRLTTSYLKMRQVFPDGLG 85
Query 134 EANYKPTFLSDD----ELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIG 189
EA + EL +L+ DGF+FVV D GKI+++SE+ L SQ +L G
Sbjct 86 EAWGSSPAMQRGATIKELGSHLLQTLDGFIFVVAPD-GKIMYISETASVHLGLSQVELTG 144
Query 190 QSLFDYLHPKDIAKVKEQLS------SSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGA 243
S+F+Y+H D ++ LS A I + G+ +
Sbjct 145 NSIFEYIHNYDQDEMNAILSLHPHINQHPLAQTHTPIGSPNGVQHPSAYDHDRGSHTIEI 204
Query 244 RRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNE 303
++FF RMKC F IH +GYLK+ G + +
Sbjct 205 EKTFFLRMKCVLAKRNA------------GLTTSGFKVIHCSGYLKARIYPDRGDGQGSL 252
Query 304 PDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAY 363
N G LVA+G H +P EI++ ++ R +D K +F D R + + Y
Sbjct 253 IQNLG-----LVAVG----HSLPSSAITEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGY 303
Query 364 LPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSF 423
PQ+L+ + Y+Y H DI + H Q+L + ++TT Y+F K G ++ ++S
Sbjct 304 EPQDLIEKTLYQYIHAADIMAMRCSH-QILLYKGQVTTKYYRFLTKGGGWVWVQSYATLV 362
Query 424 MNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQ 455
N + +IVS N V+ ++ Q
Sbjct 363 HNSRSSREVFIVSVNYVLSEREVKDLVLNEIQ 394
>sp|Q61079|SIM2_MOUSE Single-minded homolog 2 OS=Mus musculus
OX=10090 GN=Sim2 PE=1 SV=1
Length=657
Score = 319 bits (817), Expect = 4e-99, Method: Composition-based stats.
Identities = 120/512 (23%), Positives = 206/512 (40%), Gaps = 59/512 (12%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
+E K RR+K N ELA L+P +A++ +LDK +++R+ ++K
Sbjct 2 KEKSKNAAKTRREKENGEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLG 61
Query 134 EANYKPTFLS-----DDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
+A +P+ EL +L+ DGF+FVV D GKI+++SE+ L SQ +L
Sbjct 62 DAWGQPSRTGPLDSVAKELGSHLLQTLDGFVFVVASD-GKIMYISETASVHLGLSQVELT 120
Query 189 GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFF 248
G S+++Y+HP D ++ L++ L + + RSFF
Sbjct 121 GNSIYEYIHPSDHDEMTAVLTAHPPLHHHLLQEYE-------------------IERSFF 161
Query 249 CRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEG 308
RMKC + ++ TC + IH +GYLK D +
Sbjct 162 LRMKC-----VLAKRNAGLTC-------SGYKVIHCSGYLKIRQYML-----DMSLYDSC 204
Query 309 CNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQEL 368
+ LVA+G+ +P EI++ S ++ R ++D K +F+D R T + Y PQ+L
Sbjct 205 YQIVGLVAVGQ----SLPPSAITEIKLHSNMFMFRASLDLKLIFLDSRVTELTGYEPQDL 260
Query 369 LGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWT 428
+ + Y + H D HL H +L + ++TT Y+ K G ++ ++S N +
Sbjct 261 IEKTLYHHVHGCDTFHLRYAHH-LLLVKGQVTTKYYRLLSKLGGWVWVQSYATVVHNSRS 319
Query 429 KEVEYIVSTNTVVLANVLEGGDPTFPQLTASP--HSMDSMLPSGEGGPKRTHPTVPGIPG 486
IVS N V+ + + Q++ S S + L + + K P +
Sbjct 320 SRPHCIVSVNYVLTDVEYKELQLSLDQVSTSKSQESWRTTLSTSQETRKSAKPKNTKMKT 379
Query 487 GTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGGTP 546
R ++ ++ S + +SP PP +L G
Sbjct 380 KLRTNP---YPPQQYSSFQMDKLECSQVGNWRTSPPTNAVAPPEQQLHSEASDLLYGPPY 436
Query 547 DIPSSGLLSG-------QAQENPGYPYSDSSS 571
+P S + + PG P
Sbjct 437 SLPFSYHYGHFPLDSHVFSSKKPGLPAKFGQP 468
>sp|O08785|CLOCK_MOUSE Circadian locomoter output cycles protein
kaput OS=Mus musculus OX=10090 GN=Clock PE=1 SV=1
Length=855
Score = 323 bits (827), Expect = 2e-98, Method: Composition-based stats.
Identities = 135/555 (24%), Positives = 227/555 (41%), Gaps = 73/555 (13%)
Query 52 TDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDK 111
D+DD E + K R + ++ EK+RRD+ N I EL S++P +RK+DK
Sbjct 14 VDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSMLP---GNARKMDK 70
Query 112 LTVLRMAVQHMKTLR----GATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRG 167
TVL+ ++ ++ + + ++KPTFLS++E L+L A DGF + D G
Sbjct 71 STVLQKSIDFLRKHKETTAQSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTD-G 129
Query 168 KILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLP 227
I++VSESV +L + +DL+ QS+F+++ + ++V + LS+
Sbjct 130 SIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLL-------------- 175
Query 228 VKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGY 287
+ P L S + F C M K ++ + G
Sbjct 176 --ESDSLTPEYLKSKNQLEFCCHMLRGTIDPKEP---------------STYEYVRFIGN 218
Query 288 LKSWPP----TKMGLDEDNEPDNEGC--NLSCLVAIGRLHSHVVPQPVNGEIRVK--SME 339
KS T G + + + + C VA RL PQ + V+ + E
Sbjct 219 FKSLTSVSTSTHNGFEGTIQRTHRPSYEDRVCFVATVRL---ATPQFIKEMCTVEEPNEE 275
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKI 399
+ SRH+++ KF+F+D RA I+ YLP E+LGTS Y+Y+H DD+ +LA+CH ++Q K
Sbjct 276 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQY-GKG 334
Query 400 TTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTAS 459
+ Y+F K +I L++ ++ + W E+IV T+TVV + + S
Sbjct 335 KSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEES 394
Query 460 PHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGS 519
+ G R + + + SS S +
Sbjct 395 LPETAADKSQDSGSDNR----INTVSLKEAL-------ERFDHSPTPSASSRSSRKSSHT 443
Query 520 SPLNITSTP---PPDASSPGGKKILNGGTPDIPSSGLLS--------GQAQENPGYPYSD 568
+ + +STP P D S+P + + S S G + P +
Sbjct 444 AVSDPSSTPTKIPTDTSTPPRQHLPAHEKMTQRRSSFSSQSINSQSVGPSLTQPAMSQAA 503
Query 569 SSSILGENPHIGIDM 583
+ I
Sbjct 504 NLPIPQGMSQFQFSA 518
>sp|Q14190|SIM2_HUMAN Single-minded homolog 2 OS=Homo sapiens
OX=9606 GN=SIM2 PE=1 SV=2
Length=667
Score = 318 bits (814), Expect = 2e-98, Method: Composition-based stats.
Identities = 106/409 (26%), Positives = 182/409 (44%), Gaps = 49/409 (12%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
+E K RR+K N ELA L+P +A++ +LDK +++R+ ++K
Sbjct 2 KEKSKNAAKTRREKENGEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLG 61
Query 134 EANYKPTFLS-----DDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
+A +P+ EL +L+ DGF+FVV D GKI+++SE+ L SQ +L
Sbjct 62 DAWGQPSRAGPLDGVAKELGSHLLQTLDGFVFVVASD-GKIMYISETASVHLGLSQVELT 120
Query 189 GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFF 248
G S+++Y+HP D ++ L++ L + + RSFF
Sbjct 121 GNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYE-------------------IERSFF 161
Query 249 CRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEG 308
RMKC + ++ TC + IH +GYLK D +
Sbjct 162 LRMKC-----VLAKRNAGLTC-------SGYKVIHCSGYLKIRQYML-----DMSLYDSC 204
Query 309 CNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQEL 368
+ LVA+G+ +P EI++ S ++ R ++D K +F+D R T + Y PQ+L
Sbjct 205 YQIVGLVAVGQ----SLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGYEPQDL 260
Query 369 LGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWT 428
+ + Y + H D+ HL H +L + ++TT Y+ K G ++ ++S N +
Sbjct 261 IEKTLYHHVHGCDVFHLRYAHH-LLLVKGQVTTKYYRLLSKRGGWVWVQSYATVVHNSRS 319
Query 429 KEVEYIVSTNTVVLANVLEGGDPTFPQLTA--SPHSMDSMLPSGEGGPK 475
IVS N V+ + + Q++ S S + L + + K
Sbjct 320 SRPHCIVSVNYVLTEIEYKELQLSLEQVSTAKSQDSWRTALSTSQETRK 368
>sp|Q91YB2|CLOCK_SPACA Circadian locomoter output cycles protein
kaput OS=Spalax carmeli OX=164324 GN=Clock PE=2 SV=1
Length=865
Score = 322 bits (825), Expect = 4e-98, Method: Composition-based stats.
Identities = 119/437 (27%), Positives = 198/437 (45%), Gaps = 51/437 (12%)
Query 52 TDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDK 111
D+DD E + K R + ++ EK+RRD+ N I EL S++P +RK+DK
Sbjct 14 VDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSMLP---GNARKMDK 70
Query 112 LTVLRMAVQHMKTLR----GATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRG 167
TVL+ ++ ++ + + ++KPTFLS++E L+L A DGF + D G
Sbjct 71 STVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTD-G 129
Query 168 KILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLP 227
I++VSESV +L + +DL+ QS+F+++ + ++V + LS+
Sbjct 130 SIIYVSESVTSLLEHLPSDLVDQSVFNFIPEGEHSEVYKILSTHLL-------------- 175
Query 228 VKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGY 287
+ P L S + F C M K ++ + G
Sbjct 176 --ESDSLTPEYLKSKNQLEFCCHMLRGTIDPKEP---------------STYEYVRFIGN 218
Query 288 LKSWPP----TKMGLDEDNEPDNEGC--NLSCLVAIGRLHSHVVPQPVNGEIRVK--SME 339
KS G + + + + C VA RL PQ + V+ + E
Sbjct 219 FKSLNSVPTSAHNGFEGTIQRTHRPSYEDRVCFVATVRL---ATPQFIKEMCTVEEPNEE 275
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKI 399
+ SRH+++ KF+F+D RA I+ YLP E+LGTS Y+Y+H DD+ +LA+CH ++Q K
Sbjct 276 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQY-GKG 334
Query 400 TTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTAS 459
+ Y+F K +I L++ ++ + W E+IV T+TVV + + S
Sbjct 335 KSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEES 394
Query 460 PHSMDSMLPSGEGGPKR 476
+ G R
Sbjct 395 LPDAAADKSQDSGSDNR 411
>sp|Q5RAK8|CLOCK_PONAB Circadian locomoter output cycles protein
kaput OS=Pongo abelii OX=9601 GN=CLOCK PE=2 SV=1
Length=846
Score = 321 bits (823), Expect = 4e-98, Method: Composition-based stats.
Identities = 119/437 (27%), Positives = 199/437 (46%), Gaps = 51/437 (12%)
Query 52 TDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDK 111
D+DD E + K R + ++ EK+RRD+ N I EL S++P +RK+DK
Sbjct 14 VDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSMLP---GNARKMDK 70
Query 112 LTVLRMAVQHMKTLR----GATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRG 167
TVL+ ++ ++ + + ++KPTFLS++E L+L A DGF + D G
Sbjct 71 STVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTD-G 129
Query 168 KILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLP 227
I++VSESV +L + +DL+ QS+F+++ + ++V + LS+
Sbjct 130 SIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLL-------------- 175
Query 228 VKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGY 287
+ P L S + F C M K ++ + G
Sbjct 176 --ESDSLTPEYLKSKNQLEFCCHMLRGTIDPKEP---------------STYEYVKFIGN 218
Query 288 LKSWPP----TKMGLDEDNEPDNEGC--NLSCLVAIGRLHSHVVPQPVNGEIRVK--SME 339
KS G + + + + C VA RL PQ + V+ + E
Sbjct 219 FKSLNSVSSSAHNGFEGTIQRTHRPSYEDRVCFVATVRL---ATPQFIKEMCTVEEPNEE 275
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKI 399
+ SRH+++ KF+F+D RA I+ YLP E+LGTS Y+Y+H DD+ +LA+CH ++Q K
Sbjct 276 FASRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQY-GKG 334
Query 400 TTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTAS 459
+ Y+F K +I L++ ++ + W E+IV T+TVV + + S
Sbjct 335 KSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELSIEES 394
Query 460 PHSMDSMLPSGEGGPKR 476
+ + G R
Sbjct 395 LPEIAADKSQDSGSDNR 411
>sp|Q91YB0|CLOCK_NANGA Circadian locomoter output cycles protein
kaput OS=Nannospalax galili OX=1026970 GN=Clock PE=1 SV=1
Length=865
Score = 322 bits (824), Expect = 5e-98, Method: Composition-based stats.
Identities = 119/437 (27%), Positives = 198/437 (45%), Gaps = 51/437 (12%)
Query 52 TDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDK 111
D+DD E + K R + ++ EK+RRD+ N I EL S++P +RK+DK
Sbjct 14 VDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSMLP---GNARKMDK 70
Query 112 LTVLRMAVQHMKTLR----GATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRG 167
TVL+ ++ ++ + + ++KPTFLS++E L+L A DGF + D G
Sbjct 71 STVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTD-G 129
Query 168 KILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLP 227
I++VSESV +L + +DL+ QS+F+++ + ++V + LS+
Sbjct 130 SIIYVSESVTSLLEHLPSDLVDQSVFNFIPEGEHSEVYKILSTHLL-------------- 175
Query 228 VKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGY 287
+ P L S + F C M K ++ + G
Sbjct 176 --ESDSLTPEYLKSKNQLEFCCHMLRGTVDPKEP---------------STYEYVRFIGN 218
Query 288 LKSWPP----TKMGLDEDNEPDNEGC--NLSCLVAIGRLHSHVVPQPVNGEIRVK--SME 339
KS G + + + + C VA RL PQ + V+ + E
Sbjct 219 FKSLNSVPTSAHNGFEGTIQRTHRPSYEDRVCFVATVRL---ATPQFIKEMCTVEEPNEE 275
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKI 399
+ SRH+++ KF+F+D RA I+ YLP E+LGTS Y+Y+H DD+ +LA+CH ++Q K
Sbjct 276 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQY-GKG 334
Query 400 TTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTAS 459
+ Y+F K +I L++ ++ + W E+IV T+TVV + + S
Sbjct 335 KSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEES 394
Query 460 PHSMDSMLPSGEGGPKR 476
+ G R
Sbjct 395 LPDAAADKSQDSGSDNR 411
>sp|Q9WVS9|CLOCK_RAT Circadian locomoter output cycles protein
kaput OS=Rattus norvegicus OX=10116 GN=Clock PE=2 SV=1
Length=862
Score = 321 bits (823), Expect = 5e-98, Method: Composition-based stats.
Identities = 131/562 (23%), Positives = 226/562 (40%), Gaps = 87/562 (15%)
Query 52 TDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDK 111
D+DD E + K R + ++ EK+RRD+ N I EL S++P +RK+DK
Sbjct 14 VDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSMLP---GNARKMDK 70
Query 112 LTVLRMAVQHMKTLR----GATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRG 167
TVL+ ++ ++ + + ++KPTFLS++E L+L A DGF + D G
Sbjct 71 STVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTD-G 129
Query 168 KILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLP 227
I++VSE+V +L + +DL+ QS+F+++ + ++V + LS+
Sbjct 130 SIIYVSETVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLL-------------- 175
Query 228 VKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGY 287
+ P L S + F C M K ++ + G
Sbjct 176 --ESDSLTPEDLKSKNQLEFCCHMLRGTIDPKEP---------------STYEYVRFIGN 218
Query 288 LKSWPP----TKMGLDEDNEPDNEGC--NLSCLVAIGRLHSHVVPQPVNGEIRVK--SME 339
KS T G + + + + C VA RL PQ + V+ + E
Sbjct 219 FKSLNSVSTSTHNGFEGTIQRTHRPSYEDRVCFVATVRL---ATPQFIKEMCTVEEPNEE 275
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKI 399
+ SRH+++ KF+F+D RA I+ YLP E+LGTS Y+Y+H DD+ LA+CH ++Q K
Sbjct 276 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLESLAKCHEHLMQY-GKG 334
Query 400 TTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTAS 459
+ Y+F K +I L++ ++ + W E+IV T+TVV +
Sbjct 335 KSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAER--------- 385
Query 460 PHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEI--HRIRGSSPSSC 517
E G + + P +I + +E +E H S+ S
Sbjct 386 ---------RRELGVEESLPETAADKSQDSGSDNRINTVSLKEALERFDHSPTPSASSRS 436
Query 518 GSSPLNITSTPPPDASSPGGKKILNGGTPDIPSSGLLS----------------GQAQEN 561
+ + P + P +P+ ++ G +
Sbjct 437 SRKSSHTAVSDPSSTPTKIPTDTSTPPRPHLPAHEKMTQRRSSFSSQSINSQSVGSSLTQ 496
Query 562 PGYPYSDSSSILGENPHIGIDM 583
P + + I +
Sbjct 497 PAMSQAANLPIPQGMSQFQLSA 518
>sp|O15516|CLOCK_HUMAN Circadian locomoter output cycles protein
kaput OS=Homo sapiens OX=9606 GN=CLOCK PE=1 SV=1
Length=846
Score = 321 bits (821), Expect = 8e-98, Method: Composition-based stats.
Identities = 119/437 (27%), Positives = 198/437 (45%), Gaps = 51/437 (12%)
Query 52 TDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDK 111
D+DD E + K R + ++ EK+RRD+ N I EL S++P +RK+DK
Sbjct 14 VDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSMLP---GNARKMDK 70
Query 112 LTVLRMAVQHMKTLR----GATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRG 167
TVL+ ++ ++ + + ++KPTFLS++E L+L A DGF + D G
Sbjct 71 STVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTD-G 129
Query 168 KILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLP 227
I++VSESV +L + +DL+ QS+F+++ + ++V + LS+
Sbjct 130 SIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLL-------------- 175
Query 228 VKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGY 287
+ P L S + F C M K ++ + G
Sbjct 176 --ESDSLTPEYLKSKNQLEFCCHMLRGTIDPKEP---------------STYEYVKFIGN 218
Query 288 LKSWPP----TKMGLDEDNEPDNEGC--NLSCLVAIGRLHSHVVPQPVNGEIRVK--SME 339
KS G + + + + C VA RL PQ + V+ + E
Sbjct 219 FKSLNSVSSSAHNGFEGTIQRTHRPSYEDRVCFVATVRL---ATPQFIKEMCTVEEPNEE 275
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKI 399
+ SRH+++ KF+F+D RA I+ YLP E+LGTS Y+Y+H DD+ +LA+CH ++Q K
Sbjct 276 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQY-GKG 334
Query 400 TTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTAS 459
+ Y+F K +I L++ ++ + W E+IV T+TVV + + S
Sbjct 335 KSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEES 394
Query 460 PHSMDSMLPSGEGGPKR 476
+ G R
Sbjct 395 LPETAADKSQDSGSDNR 411
>sp|Q98SW2|HIF1A_ONCMY Hypoxia-inducible factor 1-alpha OS=Oncorhynchus
mykiss OX=8022 GN=hif1a PE=2 SV=1
Length=766
Score = 318 bits (814), Expect = 1e-97, Method: Composition-based stats.
Identities = 101/399 (25%), Positives = 175/399 (44%), Gaps = 50/399 (13%)
Query 64 TEHQGRIK--NAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQH 121
E + R+ +E + RR K + ELA +P ++++ LDK +++R+A+ +
Sbjct 7 PEKKSRVSSDRRKEKSRDAARCRRGKESEVFYELAQELPLPHSVTSNLDKASIMRLAISY 66
Query 122 M--KTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKI 179
+ + L N + D +L L+A +GFL V+ + G ++++SE+V K
Sbjct 67 LHMRNLLSTDNEEEQE----EREMDSQLNGSYLKAIEGFLMVLS-EDGDMIYLSENVNKC 121
Query 180 LNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRL 239
L +Q DL G S+F+Y HP D +++E L +TG K+
Sbjct 122 LGLAQIDLTGLSVFEYTHPCDHEELREMLVH------------RTGTSKKSK-------- 161
Query 240 CSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWP-PTKMGL 298
RSFF RMKC + T + K A K +H + +++ P +
Sbjct 162 EPNTERSFFLRMKCTLT-------NRGRTVNVKSATWK---VLHCSDHVRVHESPAEQIP 211
Query 299 DEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRAT 358
EP L C +P P N E + + ++SRH +D KF + D+R T
Sbjct 212 GGHKEPSVPYLVLVC---------DPIPHPSNIEAPLDTKTFLSRHTLDMKFTYCDERIT 262
Query 359 AILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRS 418
++ Y P++LL S YEY+H D HL + H + + +++T Y+ K G F+ + +
Sbjct 263 ELMGYDPEDLLNRSVYEYYHALDSDHLMKTHHNLF-AKGQVSTGQYRMLAKRGGFVWVET 321
Query 419 RWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLT 457
+ N + + +V N V+ E + Q
Sbjct 322 QATVIYNNKNSQPQCVVCVNYVLSGIEEEKMMLSLEQTE 360
>sp|Q8QGQ6|CLOCK_CHICK Circadian locomoter output cycles protein
kaput OS=Gallus gallus OX=9031 GN=CLOCK PE=1 SV=2
Length=875
Score = 320 bits (820), Expect = 2e-97, Method: Composition-based stats.
Identities = 116/443 (26%), Positives = 202/443 (46%), Gaps = 51/443 (12%)
Query 44 TDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCN 103
+ ++ S D++D E + K R + ++ EK+RRD+ N I EL S++P
Sbjct 6 STHKMSSIADRNDGSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSMLP--- 62
Query 104 AMSRKLDKLTVLRMAVQHMKTLR----GATNPYTEANYKPTFLSDDELKHLILRAADGFL 159
+RK+DK TVL+ ++ ++ + + ++KPTFLS++E L+L A DGF
Sbjct 63 GNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEALDGFF 122
Query 160 FVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERL 219
+ D G I++VSESV +L + +DL+ QS+F+++ + +++ + LSS
Sbjct 123 LAIMTD-GNIIYVSESVTPLLEHLPSDLVDQSVFNFIPEGEHSEIYKILSSHLL------ 175
Query 220 IDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSF 279
+ P L S + F C M K + ++
Sbjct 176 ----------ESDSLTPEYLKSKNQLEFCCHMLRGTIDPKEQ---------------PTY 210
Query 280 CTIHSTGYLK----SWPPTKMGLDEDNEPDNEGC--NLSCLVAIGRLHSHVVPQPVNGEI 333
+ G K G + + + + C +A RL PQ +
Sbjct 211 EYVKFIGNFKCLNNVPNSAHNGFEGTIQRSHRPSYEDKVCFIATVRL---ATPQFIKEMC 267
Query 334 RVK--SMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQ 391
V+ + E+ SRH+++ KF+F+D RA I+ YLP E+LGTS Y+Y+H DD+ +LA+CH
Sbjct 268 TVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHEH 327
Query 392 VLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDP 451
++Q K + Y+F K +I L++ ++ + W E+IV T+TVV +
Sbjct 328 LMQY-GKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERR 386
Query 452 TFPQLTASPHSMDSMLPSGEGGP 474
+ S + + G
Sbjct 387 RELGIEESLPEIKADKSQDSGSD 409
>sp|Q91YA8|CLOCK_SPAJD Circadian locomoter output cycles protein
kaput OS=Spalax judaei OX=134510 GN=Clock PE=2 SV=1
Length=865
Score = 318 bits (813), Expect = 2e-96, Method: Composition-based stats.
Identities = 118/437 (27%), Positives = 196/437 (45%), Gaps = 51/437 (12%)
Query 52 TDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDK 111
D+DD E + K R + ++ EK+RRD+ N I EL S++P +R++DK
Sbjct 14 VDRDDSSIFDGLVEEDDKNKAKRVSRNKSEKKRRDQFNVLIKELGSMLP---GNAREMDK 70
Query 112 LTVLRMAVQHMKTLR----GATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRG 167
TVL+ ++ ++ + + ++KPTFLS++E L+L A DGF + D G
Sbjct 71 STVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTD-G 129
Query 168 KILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLP 227
I++VSESV +L + +DL+ QS+F+++ + ++V + LS+
Sbjct 130 SIIYVSESVTSLLEHLPSDLVDQSVFNFIPEGEHSEVYKILSTHLL-------------- 175
Query 228 VKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGY 287
+ P L S + F C M K ++ + G
Sbjct 176 --ESDSLTPEYLKSKNQLEFCCHMLRGTIDPKEP---------------STYEYMRFIGN 218
Query 288 LKSWPPTKMGLDEDNEPDNEGC------NLSCLVAIGRLHSHVVPQPVNGEIRVK--SME 339
KS E + + C VA RL PQ + V+ + E
Sbjct 219 FKSLNSVPTSAHNGFEGTIQRTHRLSYEDRVCSVATVRL---ATPQFIKEMCTVEEPNEE 275
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKI 399
+ SRH+++ KF+F+D RA I+ YLP E+LGTS Y+Y+H DD+ +LA+CH ++Q K
Sbjct 276 FTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQY-GKG 334
Query 400 TTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTAS 459
+ Y+F K +I L++ ++ + W E+IV T+TVV + + S
Sbjct 335 KSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEES 394
Query 460 PHSMDSMLPSGEGGPKR 476
+ G R
Sbjct 395 LPDATADKGQDSGSDNR 411
>sp|Q0VBL6|HIF3A_MOUSE Hypoxia-inducible factor 3-alpha OS=Mus
musculus OX=10090 GN=Hif3a PE=1 SV=2
Length=662
Score = 306 bits (782), Expect = 8e-94, Method: Composition-based stats.
Identities = 93/434 (21%), Positives = 176/434 (41%), Gaps = 53/434 (12%)
Query 50 MDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKL 109
MD D+D + L +E + RR + + +LA +P +S L
Sbjct 1 MDWDQDRSNTEL-----------RKEKSRDAARSRRSQETEVLYQLAHTLPFARGVSAHL 49
Query 110 DKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKI 169
DK +++R+ + +++ R + + L L+A +GF+ V+ + G +
Sbjct 50 DKASIMRLTISYLRMHR----LCAAGEWNQVEKGGEPLDACYLKALEGFVMVLTAE-GDM 104
Query 170 LFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVK 229
++SE+V K L SQ +LIG S+FD++HP D ++++ L+ +++L
Sbjct 105 AYLSENVSKHLGLSQLELIGHSIFDFIHPCDQEELQDALTPRPNLSKKKL---------- 154
Query 230 TDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLK 289
+ R F RMK S T + K A K +H +G+++
Sbjct 155 ----------EAPTERHFSLRMKSTLTSRG-------RTLNLKAATWK---VLHCSGHMR 194
Query 290 SWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGK 349
++ P + L CLV I +P P + E + ++SRH++D K
Sbjct 195 AYKPPAQTSPAGSPRSEPP--LQCLVLI----CEAIPHPASLEPPLGRGAFLSRHSLDMK 248
Query 350 FVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIK 409
F + D+R + Y P +L+G S YEY H D ++ +L ++ + T Y+F +
Sbjct 249 FTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLL-SKGQAVTGQYRFLAR 307
Query 410 DGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPS 469
G ++ +++ + E I+ + ++ G + Q + S
Sbjct 308 TGGYLWTQTQATVVSGGRGPQSESIICVHFLISRVEETGVVLSLEQTEQHTRRPPRLSAS 367
Query 470 GEGGPKRTHPTVPG 483
+ G P
Sbjct 368 SQKGIPGNSVDSPA 381
>sp|Q9Y2N7|HIF3A_HUMAN Hypoxia-inducible factor 3-alpha OS=Homo
sapiens OX=9606 GN=HIF3A PE=1 SV=2
Length=669
Score = 302 bits (774), Expect = 1e-92, Method: Composition-based stats.
Identities = 108/555 (19%), Positives = 206/555 (37%), Gaps = 65/555 (12%)
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
L + + +E + RR + + +LA +P +S LDK +++R+ +
Sbjct 3 LGLQRARSTTELRKEKSRDAARSRRSQETEVLYQLAHTLPFARGVSAHLDKASIMRLTIS 62
Query 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
+++ R + + L L+A +GF+ V+ + G + ++SE+V K L
Sbjct 63 YLRMHR----LCAAGEWNQVGAGGEPLDACYLKALEGFVMVLTAE-GDMAYLSENVSKHL 117
Query 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
SQ +LIG S+FD++HP D ++++ L+ T R ++
Sbjct 118 GLSQLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKV--------------------E 157
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
+ R F RMK S T + K A K ++ +G+++++ P
Sbjct 158 APTERCFSLRMKSTLTSRG-------RTLNLKAATWK---VLNCSGHMRAYKPPAQTSPA 207
Query 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
+ L CLV I +P P + E + ++SRH++D KF + D R +
Sbjct 208 GSPDSEPP--LQCLVLI----CEAIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDDRIAEV 261
Query 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
Y P +L+G S YEY H D +++ +L ++ + T Y+F + G ++ +++
Sbjct 262 AGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLL-SKGQAVTGQYRFLARSGGYLWTQTQA 320
Query 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT 480
+ E IV + ++ G + Q S P G P +
Sbjct 321 TVVSGGRGPQSESIVCVHFLISQVEETGVVLSLEQTEQ-----HSRRPIQRGAPSQKDTP 375
Query 481 VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
PG + + +H S + + PD G +
Sbjct 376 NPG---------DSLDTPGPRILAFLH----PPSLSEAALAADPRRFCSPDLRRLLGPIL 422
Query 541 LNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSN----- 595
PS+ L + Q D + EN H + + + +
Sbjct 423 DGASVAATPSTPLATRHPQSPLSADLPDELPVGTENVHRLFTSGKDTEAVETDLDIAQDA 482
Query 596 DEAAMAVIMSLLEAD 610
D + ++ + D
Sbjct 483 DALDLEMLAPYISMD 497
>sp|Q9JHS2|HIF3A_RAT Hypoxia-inducible factor 3-alpha OS=Rattus
norvegicus OX=10116 GN=Hif3a PE=1 SV=1
Length=662
Score = 299 bits (764), Expect = 3e-91, Method: Composition-based stats.
Identities = 109/548 (20%), Positives = 207/548 (38%), Gaps = 83/548 (15%)
Query 50 MDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKL 109
MD D+D L +E + RR + + +LA +P +S L
Sbjct 1 MDWDQDRSSTEL-----------RKEKSRDAARSRRSQETEVLYQLAHTLPFARGVSAHL 49
Query 110 DKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKI 169
DK +++R+ + +++ R + + L L+A +GF+ V+ + G +
Sbjct 50 DKASIMRLTISYLRMHR----LCAAGEWNQVRKEGEPLDACYLKALEGFVMVLTAE-GDM 104
Query 170 LFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVK 229
++SE+V K L SQ +LIG S+FD++HP D ++++ L+ + ++ +A TG
Sbjct 105 AYLSENVSKHLGLSQLELIGHSIFDFIHPCDQEELQDALTPR-PSLSKKKSEAATG---- 159
Query 230 TDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLK 289
R F RMK S ++ +H +G+++
Sbjct 160 ---------------RHFSLRMKST----------LTSRGRALNLKAATWKVLHCSGHMR 194
Query 290 SWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGK 349
++ P + L CLV I +P P + E + ++SRH++D K
Sbjct 195 AYKPPAQTSPAGSPRSEPP--LQCLVLI----CEAIPHPASLEPPLGRGAFLSRHSLDMK 248
Query 350 FVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIK 409
F + D+R + Y P +L+G S YEY H D ++ +L ++ + T Y+F +
Sbjct 249 FTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLL-SKGQAVTGQYRFLAR 307
Query 410 DGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPS 469
G ++ +++ + E I+ + ++ G + Q + P
Sbjct 308 TGGYLWTQTQATVVSGGRGPQSESIICVHFLISRVEENGVVLSLEQTEQ-----HTRRPP 362
Query 470 GEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSP-------- 521
G + GIPG + A I+ S +S + P
Sbjct 363 QLGTSSKK-----GIPGNSL-------DPPAPRILAFLHPPALSEASLAADPRRFCSPDL 410
Query 522 ---LNITSTPPPDASSPGGKKILNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPH 578
+ PP A++P + P P L Q + S++ +
Sbjct 411 RRLMAPILDGPPTAATPSTPQ--AARRPQSPLPADLPDQLAVGLENAHRLSTARKNKTME 468
Query 579 IGIDMIDN 586
+D+ +
Sbjct 469 TDLDIAQD 476
>sp|Q8K3T2|PER2_SPAJD Period circadian protein homolog 2 OS=Spalax
judaei OX=134510 GN=PER2 PE=2 SV=1
Length=1248
Score = 307 bits (786), Expect = 2e-90, Method: Composition-based stats.
Identities = 96/456 (21%), Positives = 165/456 (36%), Gaps = 64/456 (14%)
Query 21 TDLLSSSLGTSGVDCNRKRKGSSTD---YQESMDTDKDDPHG-----RLEYTEHQGRIKN 72
D+ S S G R +GS D + M + D H RL TE Q
Sbjct 29 VDMSSGSSGHENCSMGRDSQGSDCDDNGKELRMLVEPSDTHSSPDAFRLMMTEPQHNPST 88
Query 73 AREAHSQIEKRRRDKM-NSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNP 131
+ + Q K K + EL +P K L +L+ A++ +K ++
Sbjct 89 SGCSSEQSAKANAHKELIRTLRELKVHLPADKKAKGKASTLAILKYALRSVKQVKANEEY 148
Query 132 YT---EANYKPTFLS---------DDELKHLILRAADGFLFVVGCDRGKILFVSESVFKI 179
Y + +P + + I++ AD F V GKIL++S V I
Sbjct 149 YQLLMSSESQPCSMDVPSYTVEQVEGITSEYIVKNADMFAVAVSLVSGKILYISNQVASI 208
Query 180 LNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRL 239
+ ++ ++L P D++ + P +
Sbjct 209 FHCKKDAFSDAKFVEFLAPHDVSVFHSYTTPYKLPPWSMCCGVDSFTQ------------ 256
Query 240 CSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLD 299
+SFFCR+ + K + T YL
Sbjct 257 ECMEEKSFFCRV----------------SVGKHHESEIRYQPFRMTPYLVKV-------- 292
Query 300 EDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATA 359
E L CL+ R+HS + E R+ + + H + F VD+RA
Sbjct 293 --QEQQGAESQLCCLLLAERIHSGYEAPRIPPEKRI----FTTTHIPNCLFQDVDERAVP 346
Query 360 ILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREK-ITTNCYKFKIKDGSFITLRS 418
+L YLPQ+L+ T H D + H+++LQ + + +F+ ++G +ITL +
Sbjct 347 LLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQAGGQPFDYSPIRFRARNGEYITLDT 406
Query 419 RWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFP 454
W SF+NPW++++ +I+ + V + + E P
Sbjct 407 SWSSFINPWSRKISFIIGRHKVRVGPLNEDVFAASP 442
>sp|Q9QZQ0|NPAS3_MOUSE Neuronal PAS domain-containing protein
3 OS=Mus musculus OX=10090 GN=Npas3 PE=1 SV=1
Length=925
Score = 299 bits (764), Expect = 7e-89, Method: Composition-based stats.
Identities = 102/434 (24%), Positives = 171/434 (39%), Gaps = 61/434 (14%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMK 123
+ +Q +E + RR K N ELA L+P A++ +LDK +++R+ + ++K
Sbjct 50 STYQNLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAITSQLDKASIIRLTISYLK 109
Query 124 TLRGATNPYTEANY------------------KPTFLS----DDELKHLILRAADGFLFV 161
A N P+ L+ + L IL++ DGF+F
Sbjct 110 MRDFANQGDPPWNLRMEGPPPNTSVKGAQRRRSPSALAIEVFEAHLGSHILQSLDGFVFA 169
Query 162 VGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLID 221
+ + GK L++SE+V L SQ +L G S+FDY+HP D ++ EQL R L
Sbjct 170 LNQE-GKFLYISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQ 228
Query 222 AKTG------LPVKTDITPGPSRLCSGA--------RRSFFCRMKCNRPSVKVEDKDFPS 267
T TP P S + RSFF RMK
Sbjct 229 GTTEDAASSASSSSQSETPEPVETTSPSLLTTDNTLERSFFIRMKSTL------------ 276
Query 268 TCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQ 327
T + IH TG L+ P G + LV + H +P
Sbjct 277 TKRGVHIKSSGYKVIHITGRLRLRVPLSHGRTV-------PSQIMGLVVVA----HALPP 325
Query 328 PVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAE 387
P E+R+ +V+R +D ++ + R + + P +++G CY + H +D+ +
Sbjct 326 PTINEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRH 385
Query 388 CHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLE 447
H +L + + T Y++ K+G +I ++S +N + I+ N ++ +
Sbjct 386 SHLDLLN-KGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYK 444
Query 448 GGDPTFPQLTASPH 461
QL P
Sbjct 445 DTPMDIAQLPHLPE 458
>sp|Q5ZQU2|NPAS2_CHICK Neuronal PAS domain-containing protein
2 OS=Gallus gallus OX=9031 GN=NPAS2 PE=1 SV=1
Length=815
Score = 295 bits (755), Expect = 2e-88, Method: Composition-based stats.
Identities = 130/515 (25%), Positives = 217/515 (42%), Gaps = 61/515 (12%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ + + R + ++ EK+RRD+ N I EL+S++P +RK+DK TVL + ++
Sbjct 2 DEDEKDRAKRASRNKSEKKRRDQFNVLIKELSSMLP---GNTRKMDKTTVLEKVIGFLQK 58
Query 125 L----RGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
+ ++KP+FLS++E L+L A DGF+ V G I++VS+S+ +L
Sbjct 59 HNEVSAQTEISEIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTTG-GSIIYVSDSITPLL 117
Query 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
+ D++ Q+L ++L ++ +++ + LSS D L
Sbjct 118 GHLPCDVLDQNLLNFLPEQEHSEIYKMLSSCMLMTDSASSDC----------------LK 161
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP----TKM 296
+ F+C + + K + ++ I G +S+ T
Sbjct 162 TDNELEFYCHLLRGSLNPK---------------EFPTYEYIKFVGNFRSYSNVPNSTCN 206
Query 297 GLDEDNEPDNEGC--NLSCLVAIGRLHSHVVPQPVNGEIRVKSM--EYVSRHAIDGKFVF 352
G DE C VA RL PQ + V+ E+ SRH+++ KF+F
Sbjct 207 GFDEAVPRAYRASPGKQICFVATVRL---ATPQFLKEMCIVEEPLEEFTSRHSLEWKFLF 263
Query 353 VDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGS 412
+D RA I+ YLP E+LGTS Y+Y+H DD+ LA CH ++Q K + CY+F K
Sbjct 264 LDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHEHLMQF-GKGKSCCYRFLTKGQQ 322
Query 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVVLANV--LEGGDPTFPQLTASPHSMDSMLPSG 470
+I L++ ++ + W + E+IV T+ VV +E + +S ++ SG
Sbjct 323 WIWLQTHYYITYHQWNSKPEFIVCTHMVVSYADVRVERRQEMGLEEVSSEVVSSALKDSG 382
Query 471 EGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPS------SCGSSPLNI 524
H I + + H + S + S+PL
Sbjct 383 SSLDPEQHFNALDIGASILSASRTPSVSSRSSPKSSHTPKSDPASTPTKLTAEASTPLQR 442
Query 525 TSTPPPD--ASSPGGKKILNGGTPDIPSSGLLSGQ 557
TS+ D A L P PS LL Q
Sbjct 443 TSSTQQDLSAHRLSQPTALQASLPSQPSCELLPQQ 477
>sp|P97460|NPAS2_MOUSE Neuronal PAS domain-containing protein
2 OS=Mus musculus OX=10090 GN=Npas2 PE=1 SV=1
Length=816
Score = 295 bits (754), Expect = 2e-88, Method: Composition-based stats.
Identities = 129/518 (25%), Positives = 218/518 (42%), Gaps = 59/518 (11%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ + + R + ++ EK+RRD+ N I EL+S++P +RK+DK TVL + ++
Sbjct 2 DEDEKDRAKRASRNKSEKKRRDQFNVLIKELSSMLP---GNTRKMDKTTVLEKVIGFLQK 58
Query 125 LRGATNPY----TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
+ + ++KP+FLS++E L+L A DGF+ VV D G I++VS+S+ +L
Sbjct 59 HNEVSAQTEICDIQQDWKPSFLSNEEFTQLMLEALDGFVIVVTTD-GSIIYVSDSITPLL 117
Query 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
+ D++ Q+L ++L ++ ++V + LSS +P P L
Sbjct 118 GHLPADVMDQNLLNFLPEQEHSEVYKILSSHML----------------VTDSPSPEFLK 161
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWP----PTKM 296
S F+C + + K + ++ I G +S+ P+
Sbjct 162 SDNDLEFYCHLLRGSLNPK---------------EFPTYEYIKFVGNFRSYNNVPSPSCN 206
Query 297 GLDE--DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSM--EYVSRHAIDGKFVF 352
G D C +A RL PQ + E+ SRH+++ KF+F
Sbjct 207 GFDNTLSRPCHVPLGKDVCFIATVRL---ATPQFLKEMCVADEPLEEFTSRHSLEWKFLF 263
Query 353 VDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGS 412
+D RA I+ YLP E+LGTS Y Y+H DD+ LA CH+ ++Q K + CY+F K
Sbjct 264 LDHRAPPIIGYLPFEVLGTSGYNYYHIDDLELLARCHQHLMQF-GKGKSCCYRFLTKGQQ 322
Query 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEG 472
+I L++ ++ + W + E+IV T++VV + L P + + +
Sbjct 323 WIWLQTHYYITYHQWNSKPEFIVCTHSVVSYADVRVERRQELALE-DPPTEAMHPSAVKE 381
Query 473 GPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDA 532
P P A +G SS S ++ TSTP
Sbjct 382 KDSSLEPPQP-------FNALDMGASGLPSSPSPSASSRSSHKSSHTAMSEPTSTPTKLM 434
Query 533 SSPGGKKILNGGTPDIPSSGLLSGQAQENPGYPYSDSS 570
+ + T QA P +S +S
Sbjct 435 AENSTTALPRPATLPQELPVQGLSQAATMPTALHSSAS 472
>sp|Q9I8A9|HIF1A_XENLA Hypoxia-inducible factor 1-alpha OS=Xenopus
laevis OX=8355 GN=hif1a PE=2 SV=1
Length=805
Score = 292 bits (748), Expect = 1e-87, Method: Composition-based stats.
Identities = 86/398 (22%), Positives = 162/398 (41%), Gaps = 47/398 (12%)
Query 63 YTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
+ + + +E + RR + EL+ +P + +S LDK +++R+ H
Sbjct 8 SEKKRISSERRKEKSRDAARCRRSNESEVFYELSHELPLPHNVSSHLDKASIMRL--DH- 64
Query 123 KTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNY 182
L + D +L L+A +GF+ V+ + G ++++SE+V K +
Sbjct 65 -QLPAVEKVADAGDLDGETELDKQLNCFYLKALEGFVLVLT-EEGDMIYLSENVNKCMGL 122
Query 183 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTA--PRERLIDAKTGLPVKTDITPGPSRLC 240
+Q +L G S+FD+ HP D +++E L+ + R+R + LP +
Sbjct 123 TQFELTGHSVFDFTHPCDHEELREMLTFRNGPAKKRKRTNHREKFLPSYEMYINQSWKN- 181
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
+ + H G + D
Sbjct 182 ------------------------------------REYKVSHMEG-PSLYRTHACIYDN 204
Query 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
N ++ G + + + +P P N E + S ++SRH++D KF + D+R T +
Sbjct 205 ANNQNHCGYKKPPMTCMV-VICEPIPHPSNIEFPLDSKTFLSRHSLDMKFSYCDERVTEL 263
Query 361 LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW 420
+ Y P ELLG S YEY+H D HL + + + T+ ++TT Y+ K G ++ + ++
Sbjct 264 VGYEPDELLGRSVYEYYHALDSDHLTKPNYNMF-TKGQVTTGQYRMLAKKGGYVWVETQA 322
Query 421 FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTA 458
N + + IV N V+ V + + Q +
Sbjct 323 TVIYNSKNSQPQCIVCVNYVLSEVVEKDLILSLGQTAS 360
>sp|Q99743|NPAS2_HUMAN Neuronal PAS domain-containing protein
2 OS=Homo sapiens OX=9606 GN=NPAS2 PE=1 SV=3
Length=824
Score = 290 bits (742), Expect = 1e-86, Method: Composition-based stats.
Identities = 129/516 (25%), Positives = 227/516 (44%), Gaps = 62/516 (12%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ + + R + ++ EK+RRD+ N I EL+S++P +RK+DK TVL + ++
Sbjct 2 DEDEKDRAKRASRNKSEKKRRDQFNVLIKELSSMLP---GNTRKMDKTTVLEKVIGFLQK 58
Query 125 LRGATNPY----TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
+ + ++KP+FLS++E L+L A DGF+ V D G I++VS+S+ +L
Sbjct 59 HNEVSAQTEICDIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTTD-GSIIYVSDSITPLL 117
Query 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
+ +D++ Q+L ++L ++ ++V + LSS +P P L
Sbjct 118 GHLPSDVMDQNLLNFLPEQEHSEVYKILSSHML----------------VTDSPSPEYLK 161
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWP----PTKM 296
S + F+C + + K + ++ I G +S+ P+
Sbjct 162 SDSDLEFYCHLLRGSLNPK---------------EFPTYEYIKFVGNFRSYNNVPSPSCN 206
Query 297 GLDE--DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSM--EYVSRHAIDGKFVF 352
G D C +A RL PQ + V E+ SRH+++ KF+F
Sbjct 207 GFDNTLSRPCRVPLGKEVCFIATVRL---ATPQFLKEMCIVDEPLEEFTSRHSLEWKFLF 263
Query 353 VDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGS 412
+D RA I+ YLP E+LGTS Y+Y+H DD+ LA CH+ ++Q K + CY+F K
Sbjct 264 LDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQF-GKGKSCCYRFLTKGQQ 322
Query 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEG 472
+I L++ ++ + W + E+IV T++VV + L P +
Sbjct 323 WIWLQTHYYITYHQWNSKPEFIVCTHSVVSYADVRVERRQELALEDPPSEALHSSALKDK 382
Query 473 G----PKRTHPTVP-GIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSP-----SSCGSSPL 522
G P++ T+ G G + + + + +S + + L
Sbjct 383 GSSLEPRQHFNTLDVGASGLNTSHSPSASSRSSHKSSHTAMSEPTSTPTKLMAEASTPAL 442
Query 523 NITSTPPPDASSPGGKKILNGGTP-DIPSSGLLSGQ 557
++T P + PG + P PSS L+ Q
Sbjct 443 PRSATLPQELPVPGLSQAATMPAPLPSPSSCDLTQQ 478
>sp|O54943|PER2_MOUSE Period circadian protein homolog 2 OS=Mus
musculus OX=10090 GN=Per2 PE=1 SV=3
Length=1257
Score = 297 bits (759), Expect = 2e-86, Method: Composition-based stats.
Identities = 96/469 (20%), Positives = 169/469 (36%), Gaps = 67/469 (14%)
Query 21 TDLLSSSLGTSGVDCNRKRKGSSTD---YQESMDTDKDDPHG------RLEYTEHQGRIK 71
D+ S S G R +GS D + M + + H RL TE +
Sbjct 32 VDMSSGSSGNENCSTGRDSQGSDCDDNGKELRMLVESSNTHPSPDDAFRLMMTEAEHNPS 91
Query 72 NAREAHSQIEKRRRDKM-NSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
+ + Q K K + EL +P K L L+ A++ +K ++
Sbjct 92 TSGCSSEQSAKADAHKELIRTLKELKVHLPADKKAKGKASTLATLKYALRSVKQVKANEE 151
Query 131 PYT---EANYKPTFLS---------DDELKHLILRAADGFLFVVGCDRGKILFVSESVFK 178
Y + +P + + I++ AD F V GKIL++S V
Sbjct 152 YYQLLMSSESQPCSVDVPSYSMEQVEGITSEYIVKNADMFAVAVSLVSGKILYISNQVAS 211
Query 179 ILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSR 238
I + ++ ++L P D++ + P +
Sbjct 212 IFHCKKDAFSDAKFVEFLAPHDVSVFHSYTTPYKLPPWSVCSGLDSFTQ----------- 260
Query 239 LCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGL 298
+SFFCR+ + K + + T YL
Sbjct 261 -ECMEEKSFFCRV----------------SVGKHHENEIRYQPFRMTPYLVKV------- 296
Query 299 DEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRAT 358
E L CL+ R+HS + E R+ + + H + F VD+RA
Sbjct 297 ---QEQQGAESQLCCLLLAERVHSGYEAPRIPPEKRI----FTTTHTPNCLFQAVDERAV 349
Query 359 AILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREK-ITTNCYKFKIKDGSFITLR 417
+L YLPQ+L+ T H D + H+++LQ + + +F+ ++G +ITL
Sbjct 350 PLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQAGGQPFDYSPIRFRTRNGEYITLD 409
Query 418 SRWFSFMNPWTKEVEYIVSTNTVVLANVLEG--GDPTFPQLTASPHSMD 464
+ W SF+NPW++++ +I+ + V + + E P P+ S+
Sbjct 410 TSWSSFINPWSRKISFIIGRHKVRVGPLNEDVFAAPPCPEEKTPHPSVQ 458
>sp|Q8IXF0|NPAS3_HUMAN Neuronal PAS domain-containing protein
3 OS=Homo sapiens OX=9606 GN=NPAS3 PE=1 SV=1
Length=933
Score = 292 bits (747), Expect = 2e-86, Method: Composition-based stats.
Identities = 100/436 (23%), Positives = 170/436 (39%), Gaps = 63/436 (14%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMK 123
+ +Q +E + RR K N ELA L+P A++ +LDK +++R+ + ++K
Sbjct 43 STYQNLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAITSQLDKASIIRLTISYLK 102
Query 124 TLRGATNPYTEANY--------------------KPTFLS----DDELKHLILRAADGFL 159
A N P+ L+ + L IL++ DGF+
Sbjct 103 MRDFANQGDPPWNLRMEGPPPNTSVKVIGAQRRRSPSALAIEVFEAHLGSHILQSLDGFV 162
Query 160 FVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERL 219
F + + GK L++SE+V L SQ +L G S+FDY+HP D ++ EQL R L
Sbjct 163 FALNQE-GKFLYISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLL 221
Query 220 IDA------KTGLPVKTDITPGPSRLCSGA--------RRSFFCRMKCNRPSVKVEDKDF 265
+ TP P S + RSFF RMK
Sbjct 222 SQGTAEDGASSASSSSQSETPEPVESTSPSLLTTDNTLERSFFIRMKSTL---------- 271
Query 266 PSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVV 325
T + IH TG L+ G + LV + H +
Sbjct 272 --TKRGVHIKSSGYKVIHITGRLRLRVSLSHGRTV-------PSQIMGLVVVA----HAL 318
Query 326 PQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
P P E+R+ +V+R +D ++ + R + + P +++G CY + H +D+ +
Sbjct 319 PPPTINEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGI 378
Query 386 AECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANV 445
H +L + + T Y++ K+G +I ++S +N + I+ N ++
Sbjct 379 RHSHLDLLN-KGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWVNYLLSNPE 437
Query 446 LEGGDPTFPQLTASPH 461
+ QL P
Sbjct 438 YKDTPMDIAQLPHLPE 453
>sp|Q8R4S5|AHR_MUSMM Aryl hydrocarbon receptor OS=Mus musculus
molossinus OX=57486 GN=Ahr PE=2 SV=1
Length=883
Score = 291 bits (744), Expect = 2e-86, Method: Composition-based stats.
Identities = 122/601 (20%), Positives = 223/601 (37%), Gaps = 77/601 (13%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
R + + + A S KR RD++N+ +D LASL+P + KLDKL+VLR
Sbjct 11 SRKRRKPVQKTVKPIPAEGIKSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLR 70
Query 117 MAVQHMK-----------TLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCD 165
++V +++ T + + D + +L+A +GF+ VV D
Sbjct 71 LSVSYLRAKSFFDVALKSTPADRNGGQDQCRAQIRDWQDLQEGEFLLQALNGFVLVVTAD 130
Query 166 RGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTG 225
+ + S ++ L + Q+D+I QS+++ +H +D A+ + QL + + +D G
Sbjct 131 -ALVFYASSTIQDYLGFQQSDVIHQSVYELIHTEDRAEFQRQLHWALNPDSAQGVDEAHG 189
Query 226 LP---VKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTI 282
P V P S R F CR++C + F +
Sbjct 190 PPQAAVYYTPDQLPPENASFMERCFRCRLRCLL------------------DNSSGFLAM 231
Query 283 HSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVS 342
+ G LK L N+ +G L +A+ + + + P P EIR K+ + +
Sbjct 232 NFQGRLKY-------LHGQNKKGKDGALLPPQLALFAIATPLQP-PSILEIRTKNFIFRT 283
Query 343 RHAIDGKFVFVDQRATAILAYLPQELLGT-SCYEYFHQDDIGHLAECHRQVLQTREKITT 401
+H +D + D + IL Y EL S Y++ H D+ H AE H ++++T E T
Sbjct 284 KHKLDFTPIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMT 343
Query 402 NCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPH 461
++ K + ++S +YI++T + L
Sbjct 344 -VFRLLAKHSRWRWVQSNARLIY--RNGRPDYIIATQRPLTDEE------GREHLQKRST 394
Query 462 SMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSP 521
S+ M +GE + P P R + + + +
Sbjct 395 SLPFMFATGEAVLYE--ISSPFSPIMDPLPI----RTKSNTSRKDWAPQSTPSKDSFHPS 448
Query 522 LNITSTP---------PPDASSPGGKKILNGGTPDIPS-------SGLLSGQAQENPGYP 565
+++ PP + +P L G S +G + E G+
Sbjct 449 SLMSALIQQDESIYLCPPSSPAPLDSHFLMGSVSKCGSWQDSFAAAGSEAALKHEQIGHA 508
Query 566 YSDSSSILGENPHIGIDMIDNDQGS--SSPSNDEAAMAVIMS--LLEADAGLGGPVDFSD 621
+ ++ G + D +ND + + D + + + D+ G VDF D
Sbjct 509 QDVNLALSGGPSELFPDNKNNDLYNIMRNLGIDFEDIRSMQNEEFFRTDSTAAGEVDFKD 568
Query 622 L 622
+
Sbjct 569 I 569
>sp|Q8R4S6|AHR_MUSMC Aryl hydrocarbon receptor OS=Mus musculus
castaneus OX=10091 GN=Ahr PE=2 SV=1
Length=848
Score = 290 bits (741), Expect = 4e-86, Method: Composition-based stats.
Identities = 127/604 (21%), Positives = 225/604 (37%), Gaps = 83/604 (14%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
R + + + A S KR RD++N+ +D LASL+P + KLDKL+VLR
Sbjct 11 SRKRRKPVQKTVKPIPAEGIKSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLR 70
Query 117 MAVQHMK-----------TLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCD 165
++V +++ T + + D + +L+A +GF+ VV D
Sbjct 71 LSVSYLRAKSFFDVALKSTPADRNGGQDQCRAQIRDWQDLQEGEFLLQALNGFVLVVTAD 130
Query 166 RGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTG 225
+ + S ++ L + Q+D+I QS+++ +H +D A+ + QL + + +D G
Sbjct 131 -ALVFYASSTIQDYLGFQQSDVIHQSVYELIHTEDRAEFQRQLHWALNPDSAQGVDEAHG 189
Query 226 LP---VKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTI 282
P V P S R F CR++C + F +
Sbjct 190 PPQAAVYYTPDQLPPENASFMERCFRCRLRCLL------------------DNSSGFLAM 231
Query 283 HSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVS 342
+ G LK L N+ +G L +A+ + + + P P EIR K+ + +
Sbjct 232 NFQGRLKY-------LHGQNKKGKDGALLPPQLALFAIATPLQP-PSILEIRTKNFIFRT 283
Query 343 RHAIDGKFVFVDQRATAILAYLPQELLGT-SCYEYFHQDDIGHLAECHRQVLQTREKITT 401
+H +D + D + IL Y EL S Y++ H D+ H AE H ++++T E T
Sbjct 284 KHKLDFTPIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMT 343
Query 402 NCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPH 461
++ K + ++S +YI+ T + L
Sbjct 344 -VFRLLAKHSRWRWVQSNARLIY--RNGRPDYIIVTQRPLTDEE------GREHLQKRST 394
Query 462 SMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHR--IRGSSPSSCGS 519
S+ M +GE + P P I + + S+PS
Sbjct 395 SLPFMFATGEAVLYE--ISSPFSPIMDPL-------PIRTKSNTSRKDWAPQSTPSKDSF 445
Query 520 SPLNITSTP----------PPDASSPGGKKILNGGTPDIPS-------SGLLSGQAQENP 562
P ++ S PP + +P L G S +G + E
Sbjct 446 HPSSLMSALIQQDESIYLCPPSSPAPLDSHFLMGSVSKCGSWQDSFAAAGSEAALKHEQI 505
Query 563 GYPYSDSSSILGENPHIGIDMIDNDQGS--SSPSNDEAAMAVIMS--LLEADAGLGGPVD 618
G+ + ++ G + D +ND + + D + + + D+ G VD
Sbjct 506 GHAQDVNLALSGGPSELFPDNKNNDLYNIMRNLGIDFEDIRSMQNEEFFRTDSTAAGEVD 565
Query 619 FSDL 622
F D+
Sbjct 566 FKDI 569
>sp|Q9Z301|PER2_RAT Period circadian protein homolog 2 OS=Rattus
norvegicus OX=10116 GN=Per2 PE=1 SV=1
Length=1257
Score = 296 bits (756), Expect = 4e-86, Method: Composition-based stats.
Identities = 93/464 (20%), Positives = 166/464 (36%), Gaps = 65/464 (14%)
Query 21 TDLLSSSLGTSGVDCNRKRKGSSTD---YQESMDTDKDDPHG------RLEYTEHQGRIK 71
D+ S S G R +GS D + M + + H RL TE +
Sbjct 32 VDMSSGSSGNENCSTGRDSQGSDCDDSGKELRMLVESSNTHPSPDDTFRLMMTEAEHNPS 91
Query 72 NAREAHSQIEKRRRDKM-NSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
+ + Q K K + EL +P K L L+ A++ +K ++
Sbjct 92 TSGCSSEQSAKADAHKELIRTLRELKVHLPADKKAKGKASTLATLKYALRSVKQVKANEE 151
Query 131 PYT---EANYKPTFLS---------DDELKHLILRAADGFLFVVGCDRGKILFVSESVFK 178
Y + +P + + I++ +D F V GKIL++S V
Sbjct 152 YYQLLMSSESQPCSVDVPSYTMEQVEGITSEYIVKNSDMFAVAVSLVSGKILYISNQVAP 211
Query 179 ILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSR 238
I + ++ ++L P D++ + P +
Sbjct 212 IFHCKKDAFSDAKFVEFLAPHDVSVFHSYTTPYKLPPWSVSSGLDSFTQ----------- 260
Query 239 LCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGL 298
+SFFCR+ + K + + T YL
Sbjct 261 -ECMEEKSFFCRV----------------SVGKHHENEIRYQPFRMTPYLVKV------- 296
Query 299 DEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRAT 358
E L CL+ R+HS + E R+ + + H + F VD+RA
Sbjct 297 ---QEQKGAASQLCCLLLAERVHSGYEAPRIPPEKRI----FTTTHTPNCLFQDVDERAV 349
Query 359 AILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQ-TREKITTNCYKFKIKDGSFITLR 417
+L YLPQ+L+ T H D + H+++LQ + + + +F+ ++G +ITL
Sbjct 350 PLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQASGQPFDYSPIRFRTRNGEYITLD 409
Query 418 SRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPH 461
+ W SF+NPW++++ +I+ + V + + E P
Sbjct 410 TSWSSFINPWSRKISFIIGRHKVRVGPLNEDVFAASPCPEEKTP 453
>sp|P30561|AHR_MOUSE Aryl hydrocarbon receptor OS=Mus musculus
OX=10090 GN=Ahr PE=1 SV=3
Length=848
Score = 289 bits (740), Expect = 5e-86, Method: Composition-based stats.
Identities = 127/604 (21%), Positives = 226/604 (37%), Gaps = 83/604 (14%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
R + + + A S KR RD++N+ +D LASL+P + KLDKL+VLR
Sbjct 11 SRKRRKPVQKTVKPIPAEGIKSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLR 70
Query 117 MAVQHMK-----------TLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCD 165
++V +++ T + + D + +L+A +GF+ VV D
Sbjct 71 LSVSYLRAKSFFDVALKSTPADRNGGQDQCRAQIRDWQDLQEGEFLLQALNGFVLVVTAD 130
Query 166 RGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTG 225
+ + S ++ L + Q+D+I QS+++ +H +D A+ + QL + + +D G
Sbjct 131 -ALVFYASSTIQDYLGFQQSDVIHQSVYELIHTEDRAEFQRQLHWALNPDSAQGVDEAHG 189
Query 226 LP---VKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTI 282
P V P S R F CR++C + F +
Sbjct 190 PPQAAVYYTPDQLPPENASFMERCFRCRLRCLL------------------DNSSGFLAM 231
Query 283 HSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVS 342
+ G LK L N+ +G L +A+ + + + P P EIR K+ + +
Sbjct 232 NFQGRLKY-------LHGQNKKGKDGALLPPQLALFAIATPLQP-PSILEIRTKNFIFRT 283
Query 343 RHAIDGKFVFVDQRATAILAYLPQELLGT-SCYEYFHQDDIGHLAECHRQVLQTREKITT 401
+H +D + D + IL Y EL S Y++ H D+ H AE H ++++T E T
Sbjct 284 KHKLDFTPIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGESGMT 343
Query 402 NCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPH 461
++ K + ++S +YI++T + L
Sbjct 344 -VFRLFAKHSRWRWVQSNARLIY--RNGRPDYIIATQRPLTDEE------GREHLQKRST 394
Query 462 SMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHR--IRGSSPSSCGS 519
S+ M +GE + P P I + + S+PS
Sbjct 395 SLPFMFATGEAVLYE--ISSPFSPIMDPL-------PIRTKSNTSRKDWAPQSTPSKDSF 445
Query 520 SPLNITSTP----------PPDASSPGGKKILNGGTPDIPS-------SGLLSGQAQENP 562
P ++ S PP + +P L G S +G + E
Sbjct 446 HPSSLMSALIQQDESIYLCPPSSPAPLDSHFLMGSVSKCGSWQDSFAAAGSEAALKHEQI 505
Query 563 GYPYSDSSSILGENPHIGIDMIDNDQGS--SSPSNDEAAMAVIMS--LLEADAGLGGPVD 618
G+ + ++ G + D +ND + + D + + + D+ G VD
Sbjct 506 GHAQDVNLALSGGPSELFPDNKNNDLYNIMRNLGIDFEDIRSMQNEEFFRTDSTAAGEVD 565
Query 619 FSDL 622
F D+
Sbjct 566 FKDI 569
>sp|O02747|AHR_RABIT Aryl hydrocarbon receptor OS=Oryctolagus
cuniculus OX=9986 GN=AHR PE=2 SV=1
Length=847
Score = 284 bits (727), Expect = 3e-84, Method: Composition-based stats.
Identities = 118/582 (20%), Positives = 217/582 (37%), Gaps = 74/582 (13%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
R + + + A S KR RD++N+ +D LASL+P + KLDKL+VLR
Sbjct 12 SRKRRKPVQKTVKPIPAEGIKSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLR 71
Query 117 MAVQHMK---------TLRGATNPYTEANYKPTFLS--DDELKHLILRAADGFLFVVGCD 165
++V +++ A + + F + + +L+A +GF+ VV D
Sbjct 72 LSVSYLRAKSFFDVALKSSSADRNGGQDPCRAKFGEGLNLQEGEFLLQALNGFVLVVTVD 131
Query 166 RGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSS----SDTAPRERLID 221
+ + S ++ L + Q+D+I QS+++ +H +D A+ + QL S + D
Sbjct 132 -ALVFYASSTIQDYLGFQQSDVIHQSVYELIHTEDRAEFQRQLHWALNPSQCTDPGQGAD 190
Query 222 AKTGLPVKTDITPG--PSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSF 279
GLP P P S R F CR++C + F
Sbjct 191 ETHGLPQPVYYNPDQLPPENSSFMERCFICRLRCLL------------------DNSSGF 232
Query 280 CTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSME 339
++ G LK L N+ +G L +A+ + + + P P EIR K+
Sbjct 233 LAMNFQGRLK-------FLHGQNKKGKDGSLLPPQLALFAIATPLQP-PSILEIRTKNFI 284
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLGT-SCYEYFHQDDIGHLAECHRQVLQTREK 398
+ ++H +D D + +L Y EL S Y++ H D+ + AE H ++++T E
Sbjct 285 FRTKHKLDFTPTGCDAKGQIVLGYTEAELCMRGSGYQFIHAADMLYCAESHIRMIKTGES 344
Query 399 ITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANV------------- 445
++ KD + ++S ++I++T +
Sbjct 345 GL-AVFRLLTKDNRWAWVQSNARFIY--KNGRPDFIIATQRPLTDEEGREHLLKRNTKLP 401
Query 446 ---LEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGR--MIA 500
G + + P MD + + G P + M
Sbjct 402 FMFTTGEAVLYEMTSPFPPIMDPLPIRPKSGTCGKDSATKPTPSKDSVHPSSLLSALMQQ 461
Query 501 EEIMEIHRIRGSSPSSCG--SSPLNITSTPPPDASSPGGKKILNGGTPDIPSSGLLSGQA 558
+E + ++ ++P + LN S P + +S G +L I S +S
Sbjct 462 DESIYLYPPSSNAPFERNFFTESLNECSNWPENVASVAGGSVLKHE--QIGQSQEVSPAF 519
Query 559 QENPGYPYSDSSSI----LGENPHIGIDMIDNDQGSSSPSND 596
+ + D+ + + +N + + I N Q D
Sbjct 520 SGDQTVLFPDNKNCDLYNIMKNLGVDFEDIKNMQNEEFFGAD 561
>sp|Q8R4S4|AHR_MUSSI Aryl hydrocarbon receptor OS=Mus spicilegus
OX=10103 GN=Ahr PE=2 SV=1
Length=854
Score = 284 bits (725), Expect = 7e-84, Method: Composition-based stats.
Identities = 124/614 (20%), Positives = 219/614 (36%), Gaps = 97/614 (16%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
R + + + A S KR RD++N+ +D LASL+P + KLDKL+VLR
Sbjct 11 SRKRRKPVQKTVKPIPAEGIKSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLR 70
Query 117 MAVQHMK-----------TLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCD 165
++V +++ T + + D + +L+A +GF+ VV D
Sbjct 71 LSVSYLRAKSFFDVALKSTPADRNGGQDQCRAQIRDWQDLQEGEFLLQALNGFVLVVTAD 130
Query 166 RGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSS----SDTAPRERLID 221
+ + S ++ L + Q+D+I QS+++ +H +D A+ + QL S + +D
Sbjct 131 -ALVFYASSTIQDYLGFQQSDVIHQSVYELIHTEDRAEFQRQLHWALNPSQCTDSAQGVD 189
Query 222 AKTGLP---VKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKS 278
G P V P S R F CR++C +
Sbjct 190 EAHGPPQAAVYYTPDQLPPENASFMERCFRCRLRCLL------------------DNSSG 231
Query 279 FCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSM 338
F ++ G LK L N+ +G L +A+ + + + P P EIR K+
Sbjct 232 FLAMNFQGRLKY-------LHGQNKKGKDGALLPPQLALFAIATPLQP-PSILEIRTKNF 283
Query 339 EYVSRHAIDGKFVFVDQRATAILAYLPQELLGT-SCYEYFHQDDIGHLAECHRQVLQTRE 397
+ ++H +D + D + IL Y EL S Y++ H D+ H AE H ++++T E
Sbjct 284 IFRTKHKLDFTPIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGE 343
Query 398 KITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANV----LEGGDPTF 453
T ++ K + ++S +YI++T + L+ +
Sbjct 344 SGMT-VFRLLAKHSRWRWVQSNARLIY--RNGRPDYIIATQRPLTDEEGREHLQKRSMSL 400
Query 454 PQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSS 513
P + A+ ++ + S P + +R + SS
Sbjct 401 PFMFATGEAVLYEI-SSPFSPIMDPLPIRTKSNTSRKDWAPQSTPSKDS------FHPSS 453
Query 514 PSSCGSSPLNITSTPPPDASSPGGKKILNGGTPDIPS-------SGLLSGQAQENPGYPY 566
S PP + +P L G S +G + E G+
Sbjct 454 LMSALIQQDESIYLCPPSSPAPLDSHFLMGSVSKCGSWQDSFAATGSEAALKHEQIGHAQ 513
Query 567 SDSSSILGENPHI------------------GIDMIDNDQGSSSPSNDEAAMAVIMSLLE 608
+ ++ G + + I + Q D A A
Sbjct 514 DVNLALSGGPSELFPDNKNNDLYSIMRNLGIDFEDIRSMQNEEFFRTDSTAAAA------ 567
Query 609 ADAGLGGPVDFSDL 622
G VDF D+
Sbjct 568 ------GEVDFKDI 575
>sp|Q8R4S7|AHR_MUSCR Aryl hydrocarbon receptor OS=Mus caroli OX=10089
GN=Ahr PE=2 SV=1
Length=854
Score = 284 bits (725), Expect = 8e-84, Method: Composition-based stats.
Identities = 125/600 (21%), Positives = 223/600 (37%), Gaps = 71/600 (12%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
R + + + A S KR RD++N+ +D LASL+P + KLDKL+VLR
Sbjct 11 SRKRRKPVQKTVKPIPAEGIKSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLR 70
Query 117 MAVQHMK-----------TLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCD 165
++V +++ T + + D + +L+A +GF+ VV D
Sbjct 71 LSVSYLRAKSFFDVALKSTPADRNGGQDQCRAQIRDWQDLQEGEFLLQALNGFVLVVTAD 130
Query 166 RGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSS----SDTAPRERLID 221
+ + S ++ L + Q+D+I QS+++ +H +D A+ + QL S + +D
Sbjct 131 -ALVFYASSTIQDYLGFQQSDVIHQSVYELIHTEDRAEFQRQLHWALNPSQCTDSAQGVD 189
Query 222 AKTGLP---VKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKS 278
G P V P S R F CR++C +
Sbjct 190 EAHGPPQTAVYYTPDQLPPENASFMERCFRCRLRCLL------------------DNSSG 231
Query 279 FCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSM 338
F ++ G LK L N+ +G L +A+ + + + P P EIR K+
Sbjct 232 FLAMNFQGRLKY-------LHGQNKKGKDGALLPPQLALFAIATPLQP-PSILEIRTKNF 283
Query 339 EYVSRHAIDGKFVFVDQRATAILAYLPQELLGT-SCYEYFHQDDIGHLAECHRQVLQTRE 397
+ ++H +D D + IL Y EL S Y++ H D+ H AE H ++++T E
Sbjct 284 IFRTKHKLDFTPSGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGE 343
Query 398 KITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANV----LEGGDPTF 453
T ++ K + ++S +YI++T + L+ +
Sbjct 344 SGMT-VFRLLAKHSRWRWVQSNARLIY--RNGRPDYIIATQRPLTDEEGREHLQKRSMSL 400
Query 454 PQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSS 513
P + A+ ++ + S P + +R + SS
Sbjct 401 PFMFATGEAVLYEI-SSPFSPIMDPLPIRAKSNTSRKDWAPQSTPSKDS------FHPSS 453
Query 514 PSSCGSSPLNITSTPPPDASSPGGKKILNGGTPDIPS-------SGLLSGQAQENPGYPY 566
S PP + +P L G S +G + E G+
Sbjct 454 LMSALIQQDESIYLCPPSSPAPLDSHFLMGSVSKCGSWQDSFAAAGSEAALKHEQIGHAQ 513
Query 567 SDSSSILGENPHIGIDMIDNDQGS--SSPSNDEAAMAVIMS--LLEADAGLGGPVDFSDL 622
+ ++ G + D +ND S + D + + + D+ G VDF D+
Sbjct 514 DVNLALSGGPSELFPDNKNNDLYSIMRNLGIDFEDIRSMQNEEFFRTDSTATGEVDFKDI 573
>sp|Q8R4S2|AHR_MUSSP Aryl hydrocarbon receptor OS=Mus spretus
OX=10096 GN=Ahr PE=2 SV=1
Length=854
Score = 284 bits (725), Expect = 8e-84, Method: Composition-based stats.
Identities = 123/614 (20%), Positives = 219/614 (36%), Gaps = 97/614 (16%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
R + + + A S KR RD++N+ +D LASL+P + KLDKL+VLR
Sbjct 11 SRKRRKPVQKTVKPIPAEGIKSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLR 70
Query 117 MAVQHMK-----------TLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCD 165
++V +++ T + + + + +L+A +GF+ VV D
Sbjct 71 LSVSYLRAKSFFDVALKSTPADRNGGQDQCRAQIRDWQNLQEGEFLLQALNGFVLVVTAD 130
Query 166 RGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSS----SDTAPRERLID 221
+ + S ++ L + Q+D+I QS+++ +H +D A+ + QL S + +D
Sbjct 131 -ALVFYASSTIQDYLGFQQSDVIHQSVYELIHTEDRAEFQRQLHWALNPSQCTDSAQGVD 189
Query 222 AKTGLP---VKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKS 278
G P V P S R F CR++C +
Sbjct 190 EAHGPPQAAVYYTPDQLPPENASFMERCFRCRLRCLL------------------DNSSG 231
Query 279 FCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSM 338
F ++ G LK L N+ +G L +A+ + + + P P EIR K+
Sbjct 232 FLAMNFQGRLKY-------LHGQNKKGKDGALLPPQLALFAIATPLQP-PSILEIRTKNF 283
Query 339 EYVSRHAIDGKFVFVDQRATAILAYLPQELLGT-SCYEYFHQDDIGHLAECHRQVLQTRE 397
+ ++H +D + D + IL Y EL S Y++ H D+ H AE H ++++T E
Sbjct 284 IFRTKHKLDFTPIGCDAKGQLILGYTEVELCTRGSGYQFIHAADMLHCAESHIRMIKTGE 343
Query 398 KITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANV----LEGGDPTF 453
T ++ K + ++S +YI++T + L+ +
Sbjct 344 SGMT-VFRLLAKHSRWRWVQSNARLIY--RNGRPDYIIATQRPLTDEEGREHLQKRSMSL 400
Query 454 PQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSS 513
P + A+ ++ + S P + +R + SS
Sbjct 401 PFMFATGEAVLYEI-SSPFSPIMDPLPIRTKSNTSRKDWAPQSTPSKDS------FHPSS 453
Query 514 PSSCGSSPLNITSTPPPDASSPGGKKILNGGTPDIPS-------SGLLSGQAQENPGYPY 566
S PP + +P L G S +G + E G+
Sbjct 454 LMSALIQQDESIYLCPPSSPAPLDSHFLMGSVSKCGSWQDSFAATGSEAALKHEQIGHAQ 513
Query 567 SDSSSILGENPHI------------------GIDMIDNDQGSSSPSNDEAAMAVIMSLLE 608
+ ++ G + + I + Q D A A
Sbjct 514 DVNLALSGGPSELFPDNKNNDLYSIMRDLGIDFEDIRSMQNEEFFRTDSTAAAA------ 567
Query 609 ADAGLGGPVDFSDL 622
G VDF D+
Sbjct 568 ------GEVDFKDI 575
>sp|P35869|AHR_HUMAN Aryl hydrocarbon receptor OS=Homo sapiens
OX=9606 GN=AHR PE=1 SV=2
Length=848
Score = 283 bits (724), Expect = 9e-84, Method: Composition-based stats.
Identities = 112/555 (20%), Positives = 211/555 (38%), Gaps = 68/555 (12%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
R + + + A S KR RD++N+ +D LASL+P + KLDKL+VLR
Sbjct 12 SRKRRKPVQKTVKPIPAEGIKSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLR 71
Query 117 MAVQHMK--------------TLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVV 162
++V +++ G + AN++ + + +L+A +GF+ VV
Sbjct 72 LSVSYLRAKSFFDVALKSSPTERNGGQDNCRAANFREGL--NLQEGEFLLQALNGFVLVV 129
Query 163 GCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSS----SDTAPRER 218
D + + S ++ L + Q+D+I QS+++ +H +D A+ + QL S +
Sbjct 130 TTD-ALVFYASSTIQDYLGFQQSDVIHQSVYELIHTEDRAEFQRQLHWALNPSQCTESGQ 188
Query 219 LIDAKTGLP---VKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKAD 275
I+ TGLP V + P R F CR++C +
Sbjct 189 GIEEATGLPQTVVCYNPDQIPPENSPLMERCFICRLRCLL------------------DN 230
Query 276 RKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRV 335
F ++ G LK L + +G L +A+ + + + P P EIR
Sbjct 231 SSGFLAMNFQGKLKY-------LHGQKKKGKDGSILPPQLALFAIATPLQP-PSILEIRT 282
Query 336 KSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGT-SCYEYFHQDDIGHLAECHRQVLQ 394
K+ + ++H +D + D + +L Y EL S Y++ H D+ + AE H ++++
Sbjct 283 KNFIFRTKHKLDFTPIGCDAKGRIVLGYTEAELCTRGSGYQFIHAADMLYCAESHIRMIK 342
Query 395 TREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANV----LEGGD 450
T E ++ K+ + ++S +YI+ T + L +
Sbjct 343 TGESGMI-VFRLLTKNNRWTWVQSNARLLY--KNGRPDYIIVTQRPLTDEEGTEHLRKRN 399
Query 451 PTFPQLTASPHSMDSMLPSGEGGPKRTHP--TVPGIPGGTRAGAGKIGRMIAEEIMEIHR 508
P + + ++ + P T G G A + + +
Sbjct 400 TKLPFMFTTGEAVLYEATNPFPAIMDPLPLRTKNGTSGKDSATTSTLSKDSLNPSSLLAA 459
Query 509 IRGSSPSSCGSSPLNITSTPP----PDASSPGGKKILNGGTPDIPSSGLLSGQAQENPGY 564
+ S + +ST P S + T + + +L + + P
Sbjct 460 MMQQDESIYLYPASSTSSTAPFENNFFNESMNECRNWQDNTAPMGNDTILKHEQIDQP-- 517
Query 565 PYSDSSSILGENPHI 579
D +S G +P +
Sbjct 518 --QDVNSFAGGHPGL 530
>sp|P41738|AHR_RAT Aryl hydrocarbon receptor OS=Rattus norvegicus
OX=10116 GN=Ahr PE=1 SV=2
Length=853
Score = 282 bits (722), Expect = 2e-83, Method: Composition-based stats.
Identities = 100/436 (23%), Positives = 181/436 (42%), Gaps = 53/436 (12%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
R + + + A S KR RD++N+ +D LASL+P + KLDKL+VLR
Sbjct 11 SRKRRKPVQKTVKPVPAEGIKSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLR 70
Query 117 MAVQHMK-----------TLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCD 165
++V +++ T + + + D + +L+A +GF+ VV D
Sbjct 71 LSVSYLRAKSFFDVALKSTPADRSRGQDQCRAQVRDWQDLQEGEFLLQALNGFVLVVTAD 130
Query 166 RGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSS----SDTAPRERLID 221
+ + S ++ L + Q+D+I QS+++ +H +D A+ + QL S + +D
Sbjct 131 -ALVFYASSTIQDYLGFQQSDVIHQSVYELIHTEDRAEFQRQLHWALNPSQCTDSAQGVD 189
Query 222 AKTGLP---VKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKS 278
GLP V P + R F CR++C +
Sbjct 190 ETHGLPQPAVYYTPDQLPPENTAFMERCFRCRLRCLL------------------DNSSG 231
Query 279 FCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSM 338
F ++ G LK L N+ +G L +A+ + + + P P EIR K+
Sbjct 232 FLAMNFQGRLKY-------LHGQNKKGKDGALLPPQLALFAIATPLQP-PSILEIRTKNF 283
Query 339 EYVSRHAIDGKFVFVDQRATAILAYLPQELLGT-SCYEYFHQDDIGHLAECHRQVLQTRE 397
+ ++H +D + D + IL Y EL S Y++ H D+ H AE H ++++T E
Sbjct 284 IFRTKHKLDFTPIGCDAKGQLILGYTEVELCNKGSGYQFIHAADMLHCAESHIRMIKTGE 343
Query 398 KITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANV----LEGGDPTF 453
T ++ K + ++S +YI++T + L+ T
Sbjct 344 SGMT-VFRLLAKHSRWRWVQSNARLIY--RNGRPDYIIATQRPLTDEEGREHLQKRSMTL 400
Query 454 PQLTASPHSMDSMLPS 469
P + A+ ++ + S
Sbjct 401 PFMFATGEAVLYEISS 416
>sp|Q95LD9|AHR_DELLE Aryl hydrocarbon receptor OS=Delphinapterus
leucas OX=9749 GN=AHR PE=2 SV=1
Length=845
Score = 280 bits (716), Expect = 1e-82, Method: Composition-based stats.
Identities = 119/594 (20%), Positives = 224/594 (38%), Gaps = 81/594 (14%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
R + + + A S KR RD++N+ +D LASL+P + KLDKL+VLR
Sbjct 12 SRKRRKPVQKTVKPVPAEGIKSNPSKRHRDRLNTELDRLASLLPFPQDVVNKLDKLSVLR 71
Query 117 MAVQHMK--TLRGATNPYTEANYKPTFLS---------DDELKHLILRAADGFLFVVGCD 165
++V +++ + T A+ + + + +L+A +GF+ VV D
Sbjct 72 LSVSYLRAKSFFDVALKSTPADRNGVQDNCRTKFREGLNLQEGEFLLQALNGFVLVVTTD 131
Query 166 RGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSS----SDTAPRERLID 221
+ + S ++ L + Q+D+I QS+++ +H +D A+ + QL S + +D
Sbjct 132 -ALVFYASSTIQDYLGFQQSDVIHQSVYELIHTEDRAEFQRQLHWALNPSQCPDSGQKMD 190
Query 222 AKTGLP---VKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKS 278
GL V + P S R F CR++C +
Sbjct 191 EANGLSQPAVYYNPDQVPPENSSSMERCFVCRLRCLL------------------DNSSG 232
Query 279 FCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSM 338
F ++ G LK L N+ +G L +A+ + + + P P EIR K+
Sbjct 233 FLAMNFQGRLKY-------LHGQNKKGKDGSILPPQLALFAIATPLQP-PSILEIRTKNF 284
Query 339 EYVSRHAIDGKFVFVDQRATAILAYLPQELLGT-SCYEYFHQDDIGHLAECHRQVLQTRE 397
+ ++H +D D + +L Y EL S Y++ H D+ + AE H ++++T E
Sbjct 285 IFRTKHKLDFTPTGCDAKGRIVLGYTEAELCMRGSGYQFIHAADMLYCAEYHIRMIKTGE 344
Query 398 KITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANV----LEGGDPTF 453
++ KD + ++S +YI++T + L +
Sbjct 345 SGLI-VFRLLTKDNRWTWVQSNARLVY--KNGRPDYIIATQRPLTDEEGTEHLRKRNLKL 401
Query 454 PQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSS 513
P + + ++ + + P + +P T+ GAG + + + SS
Sbjct 402 PFMFTTGEAVLYEVTNPF------PPIMDPLPIRTKNGAGGKDSA-TKSTLSKDFLNPSS 454
Query 514 PSSCGSSPLNITSTPPPDASSPGGKKILNGGTPDIPSSGLLSGQAQENPGYPYSDSSSI- 572
+ P +S+P + S +N P +
Sbjct 455 LLNAMMQQDESIYLYPASSSTPFERNFF--------SDSQNECSNWQNNVAPMGSDDILK 506
Query 573 ---LGENPHIGIDMIDNDQGSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLP 623
+G++ + + D P N + + IM L +DF D+
Sbjct 507 HEQIGQSQEMN-PTLSGDHAGLFPDNRNSDLYSIMKHLG--------IDFEDIK 551
>sp|O61735|CLOCK_DROME Circadian locomoter output cycles protein
kaput OS=Drosophila melanogaster OX=7227 GN=Clk PE=1 SV=3
Length=1027
Score = 276 bits (706), Expect = 4e-80, Method: Composition-based stats.
Identities = 113/519 (22%), Positives = 217/519 (42%), Gaps = 73/519 (14%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY- 132
R++ + EK+RRD+ NS +++L++L+ T SRK+DK TVL+ + +K AT+
Sbjct 17 RKSRNLSEKKRRDQFNSLVNDLSALISTS---SRKMDKSTVLKSTIAFLKNHNEATDRSK 73
Query 133 ---TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIG 189
+ ++KP FLS+DE HL+L + DGF+ V G I + SES+ L Y DL
Sbjct 74 VFEIQQDWKPAFLSNDEYTHLMLESLDGFMMVFSS-MGSIFYASESITSQLGYLPQDLYN 132
Query 190 QSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFC 249
+++D + D + + I P + + S + +F+
Sbjct 133 MTIYDLAYEMDHEALLNIFMNPTPV-----------------IEPRQTDISSSNQITFYT 175
Query 250 RMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLD---------- 299
++ +K D ++ + GY ++ T G
Sbjct 176 HLRRG---------------GMEKVDANAYELVKFVGYFRNDTNTSTGSSSEVSNGSNGQ 220
Query 300 -------EDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVF 352
P+ E V GR+ + + + ++ I S E+ S+H+++ KF+F
Sbjct 221 PAVLPRIFQQNPNAEVDKKLVFVGTGRVQNPQLIREMSI-IDPTSNEFTSKHSMEWKFLF 279
Query 353 VDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGS 412
+D RA I+ Y+P E+LGTS Y+Y+H DD+ + CH ++ QT E + Y+F K
Sbjct 280 LDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGE-GKSCYYRFLTKGQQ 338
Query 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEG 472
+I L++ ++ + + + +Y+V T+ VV + Q + + +S+ + S
Sbjct 339 WIWLQTDYYVSYHQFNSKPDYVVCTHKVVSYAEVLKDSRKEGQKSGNSNSITNNGSSKVI 398
Query 473 GPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDA 532
GT + + + + + + + G+S ++ + +
Sbjct 399 A-----------STGTSSKSASATTTLRDFELSSQNLDST---LLGNSLASLGTETAATS 444
Query 533 SSPGGKKILNGGTPDIPSSGLLSGQAQENPGYPYSDSSS 571
+ + + S ++ P Y + SS
Sbjct 445 PAVDSSPMWSASAVQPSGSCQINPLKTSRPASSYGNISS 483
>sp|O15055|PER2_HUMAN Period circadian protein homolog 2 OS=Homo
sapiens OX=9606 GN=PER2 PE=1 SV=2
Length=1255
Score = 279 bits (712), Expect = 4e-80, Method: Composition-based stats.
Identities = 89/459 (19%), Positives = 160/459 (35%), Gaps = 67/459 (15%)
Query 21 TDLLSSSLGTS---GVDCNRKRKGSSTD---YQESMDTDKDDPHGR-----LEYTEHQGR 69
D+ S S G R +GS D + M + D L + +
Sbjct 32 VDMSSGSSGHETNENCSTGRDSQGSDCDDSGKELGMLVEPPDARQSPDTFSLMMAKSEHN 91
Query 70 IKNAREAHSQIEK-RRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
+ + Q K ++ + EL +P K L L+ A++ +K ++
Sbjct 92 PSTSGCSSDQSSKVDTHKELIKTLKELKVHLPADKKAKGKASTLATLKYALRSVKQVKAN 151
Query 129 TNPYTEANYKPT------------FLSDDELKHLILRAADGFLFVVGCDRGKILFVSESV 176
Y + I++ AD F V GKIL++S+ V
Sbjct 152 EEYYQLLMSSEGHPCGADVPSYTVEEMESVTSEHIVKNADMFAVAVSLVSGKILYISDQV 211
Query 177 FKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGP 236
I + ++ ++L P D+ S A +
Sbjct 212 ASIFHCKRDAFSDAKFVEFLAPHDVGVFHSFTSPYKLPLWSMCSGADSFTQ--------- 262
Query 237 SRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKM 296
+SFFCR+ + K + + T YL
Sbjct 263 ---ECMEEKSFFCRV----------------SVRKSHENEIRYHPFRMTPYLVKV----- 298
Query 297 GLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQR 356
+ L CL+ R+HS + E R+ + + H + F VD+R
Sbjct 299 -----RDQQGAESQLCCLLLAERVHSGYEAPRIPPEKRI----FTTTHTPNCLFQDVDER 349
Query 357 ATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREK-ITTNCYKFKIKDGSFIT 415
A +L YLPQ+L+ T H D + H+++LQ+ + + +F+ ++G +IT
Sbjct 350 AVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQSGGQPFDYSPIRFRARNGEYIT 409
Query 416 LRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFP 454
L + W SF+NPW++++ +I+ + V + + E P
Sbjct 410 LDTSWSSFINPWSRKISFIIGRHKVRVGPLNEDVFAAHP 448
>sp|P97459|NPAS1_MOUSE Neuronal PAS domain-containing protein
1 OS=Mus musculus OX=10090 GN=Npas1 PE=1 SV=1
Length=594
Score = 267 bits (681), Expect = 8e-80, Method: Composition-based stats.
Identities = 103/427 (24%), Positives = 172/427 (40%), Gaps = 69/427 (16%)
Query 72 NAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGAT-- 129
+E + RR K N ELA L+P A+S +LDK +++R++V +++ R A
Sbjct 45 QRKEKSRNAARWRRGKENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALG 104
Query 130 -NPYTEANYKP------------TFLSDDELKHL---ILRAADGFLFVVGCDRGKILFVS 173
P+ P +S+ +HL IL++ DGF+F + + GK L++S
Sbjct 105 APPWGLRAVGPPAGLAPGRRGPVALVSEVFEQHLGGHILQSLDGFVFALNQE-GKFLYIS 163
Query 174 ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQL---SSSDTAPRERLIDAKTG----- 225
E+V L SQ +L G S+FDY+HP D ++V EQL ++S P + + +
Sbjct 164 ETVSIYLGLSQVELTGSSVFDYIHPGDHSEVLEQLGLRAASIGPPTPPSVSSSSSSSSSS 223
Query 226 ---LPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTI 282
P S RSFF RMK T + I
Sbjct 224 LVDTPEIEASPTEASPAFRAQERSFFVRMKSTL------------TKRGLNVKASGYKVI 271
Query 283 HSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVS 342
H TG L++ LVA+G H +P E+ + V
Sbjct 272 HVTGRLRARA-------------------LGLVALG----HTLPPAPLAELPLHGHMIVF 308
Query 343 RHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTN 402
R ++ + + R + + P EL+G SCY++ H D + + H +L + ++ T
Sbjct 309 RLSLGLTILACESRVSDHMDMGPSELVGRSCYQFVHGQDATRIRQSHLDLLD-KGQVVTG 367
Query 403 CYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHS 462
Y++ + G F+ L+S N + +++ + V+ G T P
Sbjct 368 YYRWLQRAGGFVWLQSVATVAGNGKSTGEHHVLWVSHVLSNAE---GSQTPLDAFQLPAI 424
Query 463 MDSMLPS 469
+ PS
Sbjct 425 VSQEEPS 431
>sp|Q99742|NPAS1_HUMAN Neuronal PAS domain-containing protein
1 OS=Homo sapiens OX=9606 GN=NPAS1 PE=1 SV=2
Length=590
Score = 261 bits (667), Expect = 7e-78, Method: Composition-based stats.
Identities = 100/427 (23%), Positives = 171/427 (40%), Gaps = 68/427 (16%)
Query 72 NAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGAT-- 129
+E + RR K N ELA L+P A+S +LDK +++R++V +++ R A
Sbjct 45 QRKEKSRNAARSRRGKENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALG 104
Query 130 -NPYTEANYKP------------TFLSDDELKHL---ILRAADGFLFVVGCDRGKILFVS 173
P+ P +S+ +HL IL++ DGF+F + + GK L++S
Sbjct 105 APPWGLRAAGPPAGLAPGRRGPAALVSEVFEQHLGGHILQSLDGFVFALNQE-GKFLYIS 163
Query 174 ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT 233
E+V L SQ ++ G S+FDY+HP D ++V EQL P + + +
Sbjct 164 ETVSIYLGLSQVEMTGSSVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVSSSSSSSSSL 223
Query 234 PGPSRLCSG----------ARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIH 283
+ + RSFF RMK T + IH
Sbjct 224 ADTPEIEASLTKVPPSSLVQERSFFVRMKSTL------------TKRGLHVKASGYKVIH 271
Query 284 STGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSR 343
TG L++ LVA+G H +P E+ + V R
Sbjct 272 VTGRLRAHA-------------------LGLVALG----HTLPPAPLAELPLHGHMIVFR 308
Query 344 HAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC 403
++ + + R + + P EL+G SCY++ H D + + H +L + ++ T
Sbjct 309 LSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQSHVDLLD-KGQVMTGY 367
Query 404 YKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSM 463
Y++ + G F+ L+S + + +++ + V+ EGG T P S+
Sbjct 368 YRWLQRAGGFVWLQSVATVAGSGKSPGEHHVLWVSHVLSQA--EGGQ-TPLDAFQLPASV 424
Query 464 DSMLPSG 470
S
Sbjct 425 ACEEASS 431
>sp|Q8CHI5|PER1_RAT Period circadian protein homolog 1 OS=Rattus
norvegicus OX=10116 GN=Per1 PE=1 SV=2
Length=1293
Score = 272 bits (695), Expect = 1e-77, Method: Composition-based stats.
Identities = 95/492 (19%), Positives = 181/492 (37%), Gaps = 69/492 (14%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRR-RDKMNSFIDELASLVPTCNAMSRKLDKLTVL 115
+ L + Q + + Q + R + ++ + + EL +P + L L
Sbjct 106 AYSLLSASSEQDNPSTSGCSSEQSARARTQKELMTALRELKLRLPPERRGKGRSGTLATL 165
Query 116 RMAVQHMKTLRGATNPYTEANYKP--------TFLSDDELKHLI----LRAADGFLFVVG 163
+ A+ +K ++ Y + + + + + +EL+H+ LR D F V
Sbjct 166 QYALACVKQVQANQEYYQQWSLEEGEPCAMDMSTYTLEELEHITSEYTLRNQDTFSVAVS 225
Query 164 CDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAK 223
G+I+++SE +L ++ G + L P+D+ + S A
Sbjct 226 FLTGRIVYISEQAGVLLRCKRDVFRGARFSELLAPQDVGVFYGSTTPSRLPTWGTGTSAG 285
Query 224 TGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIH 283
+GL T +S FCR++ + +
Sbjct 286 SGLKDFT------------QEKSVFCRIR----------------GGPDRDPGPRYQPFR 317
Query 284 STGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSR 343
T Y+ + D CL+ R+HS + + R+ + +R
Sbjct 318 LTPYV----------TKIRVSDGAPAQPCCLLIAERIHSGYEAPRIPPDKRI----FTTR 363
Query 344 HAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQ-TREKITTN 402
H F VD+RA +L YLPQ+LLG + H +D + H+++LQ + +
Sbjct 364 HTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPFDHS 423
Query 403 CYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHS 462
+F ++G ++T+ + W F++PW+++V +++ + V A + E D P + + S
Sbjct 424 PIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNE--DVFTPPVPSPAPS 481
Query 463 MDSMLPS-GEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSP 521
+DS + E + V G G + +H SP S S
Sbjct 482 LDSDIQELSEQIHRLLLQPVHSSSTTGLCGVGPLMSP-----GPLH-----SPGSSSDSN 531
Query 522 LNITSTPPPDAS 533
P P A
Sbjct 532 GGDAEGPGPPAP 543
>sp|O57539|NCOA3_XENLA Nuclear receptor coactivator 3 OS=Xenopus
laevis OX=8355 GN=ncoa3 PE=1 SV=1
Length=1391
Score = 272 bits (695), Expect = 1e-77, Method: Composition-based stats.
Identities = 116/523 (22%), Positives = 206/523 (39%), Gaps = 77/523 (15%)
Query 81 EKRRRDKMNSFIDELASL----VPTCNAMSRKLDKLTVLRMAVQHMKTLRGAT------N 130
EKRRR++ + +I+ELA L + + + K DK +L+ V+ ++ ++ +
Sbjct 36 EKRRREQESKYIEELADLISANLSDIDNFNVKPDKCAILKETVRQIRQIKEQGKASSNDD 95
Query 131 PYTEANYKPT---FLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDL 187
+A+ T + D L L+L+A DGFL+VV + G I+FVSE+V + L Y Q DL
Sbjct 96 DVQKADVSSTGQGVIDKDSLGPLLLQALDGFLYVVNRE-GSIVFVSENVTQYLQYKQEDL 154
Query 188 IGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSF 247
+ S++ LH +D + L S G+P ++ S +F
Sbjct 155 VNTSVYSILHEEDRKDFLKNLPKSTV----------NGVPWFSETPRQKS-------HTF 197
Query 248 FCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNE 307
CRM +ED R+ + T+ + S P + ED +
Sbjct 198 NCRMLVKTSHDHLED-------GSNLDARQRYETMQC--FALSQPRAMIEEGEDLQ---- 244
Query 308 GCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
SC++ + R + +++RH + GK V +D + E
Sbjct 245 ----SCMICVARRITTAERAFS-----ANPESFITRHDLTGKVVNIDANSLRSSMRPGFE 295
Query 368 LLGTSCYE--YFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMN 425
C + FH + + H Q T Y+F + DG+ +T +++ F N
Sbjct 296 DTIRRCIQRFLFHSEGQPWTYKRHYQEAYVHGLSETPLYRFSLADGTMVTAQTKSKLFRN 355
Query 426 PWTKEVEYIVSTNTVVLANVLEGGDPT--------FPQLTAS-PHSMDSMLPSGEGGPKR 476
P T + VST+ L G P PQ+ + P++M+SM P R
Sbjct 356 PVTNDPHGFVSTH--FLQREQNGYRPNPNPMAQGIRPQMNPNLPNTMNSMPPQAMQQQNR 413
Query 477 THPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPG 536
+ G+ G ++ M + + + +P S N ++ S P
Sbjct 414 NY----GM--GDPNSMAQMQGMRYKSPGNMAPV-NQAPGVQQSPYQNNSNYGLNMNSPPH 466
Query 537 GKKILNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHI 579
G +N P++ ++S + + +P + S + G N +
Sbjct 467 GSPGMNANQPNL----MVSPRNRASPKMASNQFSPVPGMNSPM 505
>sp|Q24167|SIMA_DROME Protein similar OS=Drosophila melanogaster
OX=7227 GN=sima PE=1 SV=2
Length=1507
Score = 270 bits (689), Expect = 1e-76, Method: Composition-based stats.
Identities = 113/541 (21%), Positives = 205/541 (38%), Gaps = 76/541 (14%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
E + + +E + RR K EL++ +P +LDK +V+R+ + +K
Sbjct 65 EKRRNNEKRKEKSRDAARCRRSKETEIFMELSAALPLKTDDVNQLDKASVMRITIAFLKI 124
Query 125 L-----------------RGATNPYTEANYKPT-------FLSDDELKHLILRAADGFLF 160
+ + KP +L+ E + L+ + DGFL
Sbjct 125 REMLQFVPSLRDCNDDIKQDIETAEDQQEVKPKLEVGTEDWLNGAEARELLKQTMDGFLL 184
Query 161 VVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLI 220
V+ G I +VSE+V + L ++ D +GQ +++Y H D A++KE LS
Sbjct 185 VLS-HEGDITYVSENVVEYLGITKIDTLGQQIWEYSHQCDHAEIKEALS----------- 232
Query 221 DAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFC 280
K L K P + S R F R+KC S S+
Sbjct 233 -LKRELAQKVKDEPQQNSGVSTHHRDLFVRLKCT----------LTSRGRSINIKSASYK 281
Query 281 TIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEY 340
IH TG+L + +G L L+AIGR +P P N EI + + +
Sbjct 282 VIHITGHLVV--------------NAKGERL--LMAIGR----PIPHPSNIEIPLGTSTF 321
Query 341 VSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKIT 400
+++H++D +F +VD + +L Y P++LL TS + H D L + VL ++ +
Sbjct 322 LTKHSLDMRFTYVDDKMHDLLGYSPKDLLDTSLFSCQHGADSERLMATFKSVL-SKGQGE 380
Query 401 TNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASP 460
T+ Y+F K G + + S+ + + + +V N V+ + + Q TA+
Sbjct 381 TSRYRFLGKYGGYCWILSQATIVYDK--LKPQSVVCVNYVISNLENKHEIYSLAQQTAAS 438
Query 461 HSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIH--RIRGSSPSSCG 518
+ + E + P I + I ++ ++
Sbjct 439 EQKEQHHQAAETEKEPEKAADPEIIAQET--KETVNTPIHTSELQAKPLQLESEKAEKTI 496
Query 519 SSPLNITSTPPPDASSPGG--KKILNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGEN 576
I + PP A+S K++ L + + + P + ++ +L +
Sbjct 497 EETKTIATIPPVTATSTADQIKQLPESNPYKQILQAELLIKRENHSPGPRTITAQLLSGS 556
Query 577 P 577
Sbjct 557 S 557
>sp|O15534|PER1_HUMAN Period circadian protein homolog 1 OS=Homo
sapiens OX=9606 GN=PER1 PE=1 SV=2
Length=1290
Score = 269 bits (687), Expect = 1e-76, Method: Composition-based stats.
Identities = 94/492 (19%), Positives = 180/492 (37%), Gaps = 69/492 (14%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRR-RDKMNSFIDELASLVPTCNAMSRKLDKLTVL 115
+ L + Q + + Q + R + ++ + + EL +P + L L
Sbjct 106 AYSLLSASSEQDNPSTSGCSSEQSARARTQKELMTALRELKLRLPPERRGKGRSGTLATL 165
Query 116 RMAVQHMKTLRGATNPYTEANYKP--------TFLSDDELKHLI----LRAADGFLFVVG 163
+ A+ +K ++ Y + + + + + +EL+H+ L+ D F V
Sbjct 166 QYALACVKQVQANQEYYQQWSLEEGEPCSMDMSTYTLEELEHITSEYTLQNQDTFSVAVS 225
Query 164 CDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAK 223
G+I+++SE +L ++ G + L P+D+ + S A
Sbjct 226 FLTGRIVYISEQAAVLLRCKRDVFRGTRFSELLAPQDVGVFYGSTAPSRLPTWGTGASAG 285
Query 224 TGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIH 283
+GL T +S FCR++ + +
Sbjct 286 SGLRDFT------------QEKSVFCRIR----------------GGPDRDPGPRYQPFR 317
Query 284 STGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSR 343
T Y+ + D CL+ R+HS + + R+ + +R
Sbjct 318 LTPYV----------TKIRVSDGAPAQPCCLLIAERIHSGYEAPRIPPDKRI----FTTR 363
Query 344 HAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQ-TREKITTN 402
H F VD+RA +L YLPQ+LLG + H +D + H+++LQ + +
Sbjct 364 HTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPFDHS 423
Query 403 CYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHS 462
+F ++G ++T+ + W F++PW+++V +++ + V A + E D P + S
Sbjct 424 PIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNE--DVFTPPAPSPAPS 481
Query 463 MDSMLPSGEGGPKRTHPTVPGIPGGTRA-GAGKIGRMIAEEIMEIHRIRGSSPSSCGSSP 521
+D+ + R P T G G + +H SP S S
Sbjct 482 LDTDIQELSEQIHRLLLQPVHSPSPTGLCGVGAVTSP-----GPLH-----SPGSSSDSN 531
Query 522 LNITSTPPPDAS 533
P P A
Sbjct 532 GGDAEGPGPPAP 543
>sp|Q15596|NCOA2_HUMAN Nuclear receptor coactivator 2 OS=Homo
sapiens OX=9606 GN=NCOA2 PE=1 SV=2
Length=1464
Score = 268 bits (685), Expect = 4e-76, Method: Composition-based stats.
Identities = 109/552 (20%), Positives = 197/552 (36%), Gaps = 87/552 (16%)
Query 53 DKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLV----PTCNAMSRK 108
D R + + EKR R++ N +I+ELA L+ + + K
Sbjct 10 DPSRAETRKRKECPDQLGPSPK---RNTEKRNREQENKYIEELAELIFANFNDIDNFNFK 66
Query 109 LDKLTVLRMAVQHMKTLRGAT-------NPYTEANYKPT---FLSDDELKHLILRAADGF 158
DK +L+ V+ ++ ++ + +++ T + D L ++L A DGF
Sbjct 67 PDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGF 126
Query 159 LFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRER 218
FVV + G ++FVSE+V + L Y+Q +L+ +S++ LH D + + L
Sbjct 127 FFVVNLE-GNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLLPKSI----- 180
Query 219 LIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKS 278
+ +F CRM +P E++ + + +K +
Sbjct 181 -----------VNGGSWSGEPPRRNSHTFNCRMLV-KPLPDSEEEGHDNQEAHQKYETMQ 228
Query 279 FCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSM 338
+ +K ED + SCL+ + R + S
Sbjct 229 CFAVSQPKSIKE-------EGEDLQ--------SCLICVARRVPMKERP-----VLPSSE 268
Query 339 EYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL---AECHRQVLQT 395
+ +R + GK +D E L C + FH G A+ H +
Sbjct 269 SFTTRQDLQGKITSLDTSTMRAAMKPGWEDLVRRCIQKFHAQHEGESVSYAKRHHHEVLR 328
Query 396 REKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTN-------TVVLANVLEG 448
+ + Y+F + DG+ + +++ + T E + ++S + V+ L G
Sbjct 329 QGLAFSQIYRFSLSDGTLVAAQTKSKLIRSQTTNEPQLVISLHMLHREQNVCVMNPDLTG 388
Query 449 ---GDPTFPQLTASP-HSMDSMLPSGEGGPKRTHPTVP--------GIPGGTRAGAGKI- 495
G P P + SP H G+ ++ P G+P G G+G +
Sbjct 389 QTMGKPLNPISSNSPAHQALCSGNPGQDMTLSSNINFPINGPKEQMGMPMGRFGGSGGMN 448
Query 496 ---GRMIAEEIMEIHRIRGSSPSSC--GSSPLNITSTPPPDASSPGGKKILNGGTPDIPS 550
G + ++ +SPS G +P TS P G G+P IP
Sbjct 449 HVSGMQATTPQGSNYALKMNSPSQSSPGMNPGQPTSMLSPRHRMSPGV----AGSPRIPP 504
Query 551 SGLLSGQAQENP 562
S + +P
Sbjct 505 SQFSPAGSLHSP 516
>sp|Q8K3T3|PER1_SPAJD Period circadian protein homolog 1 OS=Spalax
judaei OX=134510 GN=PER1 PE=2 SV=1
Length=1285
Score = 267 bits (682), Expect = 5e-76, Method: Composition-based stats.
Identities = 94/491 (19%), Positives = 181/491 (37%), Gaps = 67/491 (14%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRR-RDKMNSFIDELASLVPTCNAMSRKLDKLTVL 115
+ L + Q + + Q + R + ++ + + EL +P + + L L
Sbjct 106 AYSLLSASSEQDNPSTSGCSSEQSARARTQKELMTALRELKLRLPPGHRGKGRSGTLATL 165
Query 116 RMAVQHMKTLRGATNPYTEANYKP--------TFLSDDELKHLI----LRAADGFLFVVG 163
+ A+ +K ++ Y + + + + + +EL+H+ LR D F V
Sbjct 166 QYALACVKQVQANQEYYQQWSLEEGEPCAMDMSTYTLEELEHITSEYTLRNQDTFSVAVS 225
Query 164 CDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAK 223
G+I+++SE +L ++ G + L P+D+ + A
Sbjct 226 FLTGRIVYISEQAGVLLRCKRDVFRGARFSELLAPQDVGVFYGSTAPFRLPTWGTGTSAG 285
Query 224 TGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIH 283
+GL T +S FCR++ + +
Sbjct 286 SGLKDFT------------QEKSVFCRIR----------------GGPDRDPGPRYHPFR 317
Query 284 STGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSR 343
T Y+ + D CL+ R+HS + + R+ + +R
Sbjct 318 LTPYV----------TKIRVSDGAPAQPCCLLIAERIHSGYEAPRIPPDKRI----FTTR 363
Query 344 HAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQ-TREKITTN 402
H F VD+RA +L YLPQ+LLG + H +D + H+++LQ + +
Sbjct 364 HTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPFDHS 423
Query 403 CYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHS 462
+F ++G ++T+ + W F++PW+++V +++ + V A + E D P + S
Sbjct 424 PIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNE--DVFTPPAPSPAPS 481
Query 463 MDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPL 522
+DS + R T G IG +++ + SP S S
Sbjct 482 LDSDIQELSEQIHRLLLQPVHSSSPT--GPCGIGPLMSPRPLH-------SPGSSSDSNG 532
Query 523 NITSTPPPDAS 533
P P A
Sbjct 533 GDAEGPGPPAP 543
>sp|O35973|PER1_MOUSE Period circadian protein homolog 1 OS=Mus
musculus OX=10090 GN=Per1 PE=1 SV=2
Length=1291
Score = 266 bits (679), Expect = 1e-75, Method: Composition-based stats.
Identities = 95/492 (19%), Positives = 179/492 (36%), Gaps = 69/492 (14%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRR-RDKMNSFIDELASLVPTCNAMSRKLDKLTVL 115
+ L + Q + + Q + R + ++ + + EL +P + L L
Sbjct 106 AYSLLSASSEQDNPSTSGCSSEQSARARTQKELMTALRELKLRLPPERRGKGRSGTLATL 165
Query 116 RMAVQHMKTLRGATNPYTEANYKP--------TFLSDDELKHLI----LRAADGFLFVVG 163
+ A+ +K ++ Y + + + + + +EL+H+ LR D F V
Sbjct 166 QYALACVKQVQANQEYYQQWSLEEGEPCAMDMSTYTLEELEHITSEYTLRNQDTFSVAVS 225
Query 164 CDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAK 223
G+I+++SE +L ++ G + L P+D+ + S A
Sbjct 226 FLTGRIVYISEQAGVLLRCKRDVFRGARFSELLAPQDVGVFYGSTTPSRLPTWGTGTSAG 285
Query 224 TGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIH 283
+GL T +S FCR++ + +
Sbjct 286 SGLKDFT------------QEKSVFCRIR----------------GGPDRDPGPRYQPFR 317
Query 284 STGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSR 343
T Y+ + D CL+ R+HS + + R+ + +R
Sbjct 318 LTPYV----------TKIRVSDGAPAQPCCLLIAERIHSGYEAPRIPPDKRI----FTTR 363
Query 344 HAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQ-TREKITTN 402
H F VD+RA +L YLPQ+LLG + H +D + H+++LQ + +
Sbjct 364 HTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPFDHS 423
Query 403 CYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHS 462
+F ++G ++T+ + W F++PW+++V +++ + V A + E D P + S
Sbjct 424 PIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNE--DVFTPPAPSPAPS 481
Query 463 MDSMLPSGEGGPKRTHPTVPGIPGGTRA-GAGKIGRMIAEEIMEIHRIRGSSPSSCGSSP 521
+DS + R T G G + +H SP S S
Sbjct 482 LDSDIQELSEQIHRLLLQPVHSSSPTGLCGVGPLMSP-----GPLH-----SPGSSSDSN 531
Query 522 LNITSTPPPDAS 533
P P A
Sbjct 532 GGDAEGPGPPAP 543
>sp|Q61026|NCOA2_MOUSE Nuclear receptor coactivator 2 OS=Mus musculus
OX=10090 GN=Ncoa2 PE=1 SV=3
Length=1462
Score = 265 bits (676), Expect = 6e-75, Method: Composition-based stats.
Identities = 111/553 (20%), Positives = 202/553 (37%), Gaps = 89/553 (16%)
Query 53 DKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLV----PTCNAMSRK 108
D R + + EKR R++ N +I+ELA L+ + + K
Sbjct 10 DPSRAETRKRKECPDQLGPSPK---RSTEKRNREQENKYIEELAELIFANFNDIDNFNFK 66
Query 109 LDKLTVLRMAVQHMKTLRGAT-------NPYTEANYKPT---FLSDDELKHLILRAADGF 158
DK +L+ V+ ++ ++ + +++ T + D L ++L A DGF
Sbjct 67 PDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGF 126
Query 159 LFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRER 218
FVV + G ++FVSE+V + L Y+Q +L+ +S++ LH D + + L
Sbjct 127 FFVVNLE-GSVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLLPKSM----- 180
Query 219 LIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKS 278
+ + +F CRM +P E++ S + +K +
Sbjct 181 -----------VNGGSWSGEPPRRSSHTFNCRMLV-KPLPDSEEEGHDSQEAHQKYEAMQ 228
Query 279 FCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSM 338
+ +K ED + SCL+ + R P+ + S
Sbjct 229 CFAVSQPKSIKE-------EGEDLQ--------SCLICVARRV------PMKERPTLPSS 267
Query 339 E-YVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL---AECHRQVLQ 394
E + +R + GK +D E L C + FH G A+ H +
Sbjct 268 ESFTTRQDLQGKITSLDTSTMRAAMKPGWEDLVRRCIQKFHTQHEGESLSYAKRHHHEVL 327
Query 395 TREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTN-------TVVLANVLE 447
+ + Y+F + DG+ + +++ + T E + ++S + V+ L
Sbjct 328 RQGLAFSQIYRFSLSDGTLVAAQTKSKLIRSQTTNEPQLVISLHMLHREQNVCVMNPDLT 387
Query 448 G---GDPTFPQLTASP-HSMDSMLPSGEGGPKRTHPTVP--------GIPGGTRAGAGKI 495
G G P P ++SP H G+ ++ P G+P G G+G +
Sbjct 388 GQAMGKPLNPISSSSPAHQALCSGNPGQDMTLGSNINFPMNGPKEQMGMPMGRFGGSGGM 447
Query 496 ----GRMIAEEIMEIHRIRGSSPSSC--GSSPLNITSTPPPDASSPGGKKILNGGTPDIP 549
G + ++ +SPS G +P +S P G G+P IP
Sbjct 448 NHVSGMQATTPQGSNYALKMNSPSQSSPGMNPGQASSVLSPRQRMSPGV----AGSPRIP 503
Query 550 SSGLLSGQAQENP 562
S + +P
Sbjct 504 PSQFSPAGSLHSP 516
>sp|Q9W705|NCOA2_XENLA Nuclear receptor coactivator 2 OS=Xenopus
laevis OX=8355 GN=ncoa2 PE=2 SV=1
Length=1516
Score = 261 bits (666), Expect = 1e-73, Method: Composition-based stats.
Identities = 111/608 (18%), Positives = 218/608 (36%), Gaps = 105/608 (17%)
Query 59 GRLEYTEHQGRIKNAREA--------HSQIEKRRRDKMNSFIDELASLV----PTCNAMS 106
G + + +E+ EKR R++ N +I+ELA L+ + ++
Sbjct 2 GENLSDPSRAEPRKRKESLDQLGPSPKRSTEKRNREQENKYIEELAELIFANFNDIDNLN 61
Query 107 RKLDKLTVLRMAVQHMKTLR-------GATNPYTEANYK---PTFLSDDELKHLILRAAD 156
K DK +L+ V+ ++ ++ + +A+ + + D L ++L A D
Sbjct 62 FKPDKCAILKETVKQIRQIKEHEKTAAANEDEVQKADVSSTGQSVIDKDALGPMMLEALD 121
Query 157 GFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPR 216
GF FVV + G ++FVSE+V + L Y+Q +L+ S++ LH D ++ + L
Sbjct 122 GFFFVVNRE-GNVVFVSENVTQYLRYNQEELMNTSVYSILHVGDHSEFIKNLLPKSLV-- 178
Query 217 ERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADR 276
G+P +F CRM +P ++ E++ + +K +
Sbjct 179 -------NGVP-------------RRNSHTFNCRMLV-KPMMECEEERHDGQETHQKYES 217
Query 277 KSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVK 336
+ +K ED + SCL+ + R +
Sbjct 218 MQCFAVSQPKSIKE-------EGEDFQ--------SCLICVARRVPVKERP-----VPPP 257
Query 337 SMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL--AECHRQVLQ 394
S + +R GK +D + L E + C + FH G + + H Q +
Sbjct 258 SESFTTRQDFQGKITSLDTTSMRALMRPGWEDMVRRCIQRFHSQHDGEISYSRRHHQEVL 317
Query 395 TREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV-------LANVLE 447
+ T+ Y+F + DG+ + +++ + E ++S + + L L
Sbjct 318 RQGHATSPFYRFSLSDGTTVVAQTKSRLMRSQTNNEPPLVLSLHVLQREQNVCGLNQDLA 377
Query 448 G---GDPTFPQLTASP-HSMDSMLPSGEGGPKRTHPTVP--------GIPGGTRAGAGKI 495
G G P ++SP H G+ ++ G+ G G+G +
Sbjct 378 GQAMGKTLNPVQSSSPAHQAMYGGNPGQDTTISSNMNYAISGPKEQMGLATGRFVGSGGM 437
Query 496 GRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGGTPDIPSSGLLS 555
I ++ ++P + + P S G+ N
Sbjct 438 N--------HISSLQATTP---QGNNYALKMNSPSHGSPGMGQGQPNSMLSPRHRVSPGV 486
Query 556 GQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAMAVIMSLLEADAGLGG 615
+ P+S + S+ H + + + S S +N +++ + +L E L
Sbjct 487 AGSPRIAPSPFSPAGSL-----HSPVSVCSSTGNSHSYTN--SSLNALQALSEGQGPLAP 539
Query 616 PVDFSDLP 623
P+ DL
Sbjct 540 PLSSPDLK 547
>sp|Q8QGQ8|PER2_CHICK Period circadian protein homolog 2 OS=Gallus
gallus OX=9031 GN=PER2 PE=2 SV=1
Length=1344
Score = 260 bits (664), Expect = 2e-73, Method: Composition-based stats.
Identities = 86/459 (19%), Positives = 173/459 (38%), Gaps = 74/459 (16%)
Query 21 TDLLSSSLGT--------SGVDCNRKRKGSSTD---YQESMDTDKDDPHG-------RLE 62
++ S S G G +D +M + D H L
Sbjct 75 IEMSSGSSGNDFSGNETNENYSSGHDSHGHESDENGKDSAMLMESSDCHKSSSSNAFSLM 134
Query 63 YTEHQGRIKNAREAHSQIEK-RRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQH 121
+ ++ + Q K + + ++ + EL + +P + K LT L+ A++
Sbjct 135 IANSEHNQSSSGCSSEQSTKAKTQKELLKTLQELKAHLPAEKRIKGKSSVLTTLKYALKS 194
Query 122 MKTLRGATNPYT---EANYKPTFLS---------DDELKHLILRAADGFLFVVGCDRGKI 169
+K ++ Y +P+ L+ + I++ AD F V GKI
Sbjct 195 IKQVKANEEYYQLLMINESQPSGLNVSSYTVEEVETITSEYIMKNADMFAVAVSLITGKI 254
Query 170 LFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVK 229
+++S+ IL ++ + L P+D++ + A++
Sbjct 255 VYISDQAAAILRCKRSYFKNAKFVELLAPQDVSVFYTSTTPYRLPSWNICSRAESSTQ-- 312
Query 230 TDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLK 289
+SFFCR+ + K++ + + T YL
Sbjct 313 ----------DCMEEKSFFCRI----------------SAGKERENEICYHPFRMTPYLI 346
Query 290 SWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGK 349
++ D+ L C++ ++HS + + R+ + + H
Sbjct 347 KVQDPEVAEDQ----------LCCVLLAEKVHSGYEAPRIPPDKRI----FTTTHTPTCL 392
Query 350 FVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREK-ITTNCYKFKI 408
F VD+RA +L YLPQ+L+GT + H +D + H+++LQ + + +F
Sbjct 393 FQDVDERAVPLLGYLPQDLIGTPVLVHLHPNDRPLMLAIHKKILQYGGQPFDYSPIRFCT 452
Query 409 KDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLE 447
++G +IT+ + W SF+NPW+++V +I+ + V + E
Sbjct 453 RNGDYITMDTSWSSFINPWSRKVSFIIGRHKVRTGPLNE 491
>sp|Q9WUI9|NCOA2_RAT Nuclear receptor coactivator 2 OS=Rattus
norvegicus OX=10116 GN=Ncoa2 PE=1 SV=1
Length=1465
Score = 260 bits (664), Expect = 2e-73, Method: Composition-based stats.
Identities = 102/544 (19%), Positives = 189/544 (35%), Gaps = 68/544 (13%)
Query 53 DKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLV----PTCNAMSRK 108
D R + + EKR R++ N +I+ELA L+ + + K
Sbjct 10 DPSRAETRKRKECPDQLGPSPK---RSTEKRNREQENKYIEELAELIFANFNDIDNFNFK 66
Query 109 LDKLTVLRMAVQHMKTLRGAT-------NPYTEANYKPT---FLSDDELKHLILRAADGF 158
DK +L+ V+ ++ ++ + +++ T + D L ++L A DGF
Sbjct 67 PDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGF 126
Query 159 LFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRER 218
FVV + G ++FVSE+V + L Y+Q +L+ +S++ LH D + + L
Sbjct 127 FFVVNLE-GNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLLPKSMVNGG- 184
Query 219 LIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKS 278
T P R +F CRM +P E++ + + +K +
Sbjct 185 ------------SWTGEPPR---RNSHTFNCRMLV-KPLPDSEEEGHDNQEAHQKYETMQ 228
Query 279 FCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSM 338
+ +K ED + SCL+ + R + S
Sbjct 229 CFAVSQPKSIKE-------EGEDKQ--------SCLICVARRVPMKERPALPS-----SE 268
Query 339 EYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL---AECHRQVLQT 395
+ +R + GK F+D E L C + FH G A+ H +
Sbjct 269 SFTTRQDLQGKITFLDTSTMRDAMKPGWEDLVRRCIQKFHTQHEGESLSYAKRHHHEVLR 328
Query 396 REKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQ 455
+ + Y+F + DG+ + +++ + T E + ++S + + + + P
Sbjct 329 QGLAFSQIYRFSLSDGTLVAAQTKSKLIRSQTTNEPQLVISIHML---HREQNVCVMNPD 385
Query 456 LTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPS 515
LT S ++ + G PG A + M R + S P
Sbjct 386 LTGQAMGKPLSPMSSSSPARQAMCS--GNPGQDVALGSNMNFP-----MNGPREQMSMPM 438
Query 516 SCGSSPLNITSTPPPDASSPGGKKILNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGE 575
+ A++P G SS L+ + P S +
Sbjct 439 GRFGGSGGMNHVSGMQATTPQGSNYALKMNSPSQSSPGLNPGQPSSVLSPRHRMSPGVAG 498
Query 576 NPHI 579
+P +
Sbjct 499 SPRV 502
>sp|Q8CJE2|PER3_RAT Period circadian protein homolog 3 OS=Rattus
norvegicus OX=10116 GN=Per3 PE=2 SV=1
Length=1119
Score = 259 bits (660), Expect = 2e-73, Method: Composition-based stats.
Identities = 92/406 (23%), Positives = 161/406 (40%), Gaps = 55/406 (14%)
Query 76 AHSQIEKRRR--DKMNSFIDELASLVPT-CNAMSRKLDKLT-VLRM--AVQHMKTLRGAT 129
+HS+ E R R +++ + E+ P + LD L LR +VQ +
Sbjct 40 SHSEHEDRNRMSEELIMVVQEMKKYFPAERHTKPSTLDALNYALRCVHSVQANSEFFQSL 99
Query 130 NPYTEANYKPTFLSDDELKHL----ILRAADGFLFVVGCDRGKILFVSESVFKILNYSQN 185
+P + T + +EL L + D F+ V G+++ +SE ILN +
Sbjct 100 SPRGARQAEATVYNLEELTSLASEHTSKNTDTFVAVFSFLSGRLVHISEQAAWILNSKKG 159
Query 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
L D L P+D+ A T LP T S+ +
Sbjct 160 FLKSLHFVDLLAPRDVRVFYAH-------------TAPTQLPFWNTWTQRASQYECAPVK 206
Query 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPD 305
FFCR+ C + ++ + YL + + +P+
Sbjct 207 PFFCRI-CG---------------GGDREQKRHYSPFRILPYL-------VHVHSPAQPE 243
Query 306 NEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLP 365
E C CL + ++HS + + RV + + H F+ VD+RA +L +LP
Sbjct 244 PEPC---CLTLVEKIHSGYEAPRIPVDKRV----FTTTHTPGCVFLEVDERAVPLLGFLP 296
Query 366 QELLGTSCYEYFHQDDIGHLAECHRQVLQT--REKITTNCYKFKIKDGSFITLRSRWFSF 423
Q+L+GTS Y H +D + H++VL+ + +F ++G ++ L S W SF
Sbjct 297 QDLIGTSILTYLHPEDRPLMVAVHQKVLKYVGHPPFEHSPIRFCTQNGDYVILDSSWSSF 356
Query 424 MNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPS 469
+NPW+++V +I+ + V + + E T + S + L
Sbjct 357 VNPWSRKVSFIIGRHKVRTSPLNEDVFATRIKKATSHDEDITELQE 402
>sp|Q98TW1|NCOA2_DANRE Nuclear receptor coactivator 2 OS=Danio
rerio OX=7955 GN=ncoa2 PE=1 SV=1
Length=1505
Score = 260 bits (663), Expect = 3e-73, Method: Composition-based stats.
Identities = 113/559 (20%), Positives = 205/559 (37%), Gaps = 94/559 (17%)
Query 47 QESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLV----PTC 102
+ S D + + R E R EKR R+ + +I+ELA L+
Sbjct 6 ENSSDPARSEAQKRKEGPSDLLGPSPKR----STEKRNREHESKYIEELAELIFANFNDI 61
Query 103 NAMSRKLDKLTVLRMAVQHMKTLR-------GATNPYTEANYK---PTFLSDDELKHLIL 152
+ + K DK +L+ V+ ++ ++ + +A+ + + D L ++L
Sbjct 62 DNFNVKPDKCAILKETVKQIRQIKEQEKAAAANEDEVQKADVSSTGQSVIDKDALGPMML 121
Query 153 RAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSD 212
A DGF FVV + G I+FVSE+V + L Y+Q +L+ S++ LH D A+ + L
Sbjct 122 EALDGFFFVVNME-GNIVFVSENVTQYLRYNQEELMNTSVYSILHVGDHAEFIKNLLPKS 180
Query 213 TAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKK 272
+ P S +F CRM N S E +D
Sbjct 181 ----------------HVNGVPWSSENPRRNSHTFNCRMLVNPHSEAEETQDH------- 217
Query 273 KADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGE 332
++ + T+ + S P + ED + SCL+ + R VP
Sbjct 218 -EAQQKYETMQC--FAVSEPKSIKEEGEDFQ--------SCLICVARR----VPMKERPM 262
Query 333 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL--AECHR 390
+ + + +R + GK +D E L C + FH + G + A+ H+
Sbjct 263 LPTQ-ESFTTRQDLQGKITSLDTSLLRASMKPGWEDLVRRCIQRFHLQNDGDISFAKRHQ 321
Query 391 QVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV--------- 441
Q + + + Y+F + DG+ ++ ++ + T E + +S + +
Sbjct 322 QEVIRHGQAFSPIYRFSLSDGTIVSAHTKSKLVRSSSTNEPQLYMSLHILQREQPVCGMA 381
Query 442 --LANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMI 499
L N G P P + + P G+ ++ + PG
Sbjct 382 SDLGNAQTMGKPMNPMSSPNTAGSSC-TPQGQDATISSNTSTFPSPGAQ----------- 429
Query 500 AEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNG-GTPDIPSSGLLSGQA 558
+E +HR P ++ + A++P G +P S G+LS +
Sbjct 430 -KEPGAMHRF---------GCPGTMSHSATMQAATPQGSGYPLKLSSPSQGSPGMLSPRH 479
Query 559 QENPGYPYSDSSSILGENP 577
+ +PG S +P
Sbjct 480 RASPGVAGSPRLPPPQFSP 498
>sp|B5DE09|NCOA2_XENTR Nuclear receptor coactivator 2 OS=Xenopus
tropicalis OX=8364 GN=ncoa2 PE=2 SV=1
Length=1440
Score = 259 bits (661), Expect = 5e-73, Method: Composition-based stats.
Identities = 117/612 (19%), Positives = 223/612 (36%), Gaps = 98/612 (16%)
Query 48 ESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLV----PTCN 103
M + DP + + EKR R++ N +I+ELA L+ +
Sbjct 2 SGMGENPSDPSRAEPRKRKESIDQLGPSPKRSTEKRNREQENKYIEELAELIFANFNDID 61
Query 104 AMSRKLDKLTVLRMAVQHMKTLR-------GATNPYTEANYK---PTFLSDDELKHLILR 153
++ K DK +L+ V+ ++ ++ + +A+ + + D L ++L
Sbjct 62 NLNFKPDKCAILKETVKQIRQIKEHEKTAAANEDEVQKADVSSTGQSVIDKDALGPMMLE 121
Query 154 AADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDT 213
A DGF FVV + G ++FVSE+V + L Y+Q +L+ S++ LH D ++ + L
Sbjct 122 ALDGFFFVVNRE-GNVVFVSENVTQYLRYNQEELMNTSVYSILHVGDHSEFIKNLLP--- 177
Query 214 APRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKK 273
K+ + GP R +F CRM +P ++ E++ + +K
Sbjct 178 ---------------KSIVNGGPRR----NSHTFNCRMLV-KPMMECEEEGHDGQETHQK 217
Query 274 ADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEI 333
+ + +K ED + SCL+ + R +
Sbjct 218 YETMQCFAVSQPKSIKE-------EGEDFQ--------SCLICVARRVPMKERP-----V 257
Query 334 RVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL--AECHRQ 391
S + +R + GK +D L E L C + FH G + ++ H Q
Sbjct 258 PPPSESFTTRQDLQGKITSLDTTNMRALMRPGWEDLVRRCIQRFHSQHDGEISYSKRHHQ 317
Query 392 VLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV-------LAN 444
+ + T+ Y+F + DG+ + ++ + T E + ++S + + L
Sbjct 318 EVLRQGHATSPFYRFALSDGTTVLAHTKSKLMRSQTTNEPQLVLSLHVLQREQNMCGLNQ 377
Query 445 VLEG---GDPTFPQLTASP-HSMDSMLPSGEGGPKRTHPTVP--------GIPGGTRAGA 492
L G G P ++SP H G+ ++ G+ G G+
Sbjct 378 DLAGQAMGKTLNPVQSSSPAHQAMYGGNPGQDTTISSNMNYAITGPKEQMGMAAGRFVGS 437
Query 493 GKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGGTPDIPSSG 552
G + I ++ ++P + + P S G+ N
Sbjct 438 GGMN--------HISSLQATTP---QGNNYALKINSPSQGSPGMGQGQPNSMLSP---RH 483
Query 553 LLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAMAVIMSLLEADA- 611
+S +P S S + H + + + S S +N +++ + +L E
Sbjct 484 RVSPGVAGSPRIAPSQFSP--AGSLHSPVSVCSSTGNSHSYTN--SSLNALQALSEGHGV 539
Query 612 GLGGPVDFSDLP 623
L P+ DL
Sbjct 540 PLAPPLSSPDLK 551
>sp|Q9Y6Q9|NCOA3_HUMAN Nuclear receptor coactivator 3 OS=Homo
sapiens OX=9606 GN=NCOA3 PE=1 SV=1
Length=1424
Score = 259 bits (660), Expect = 6e-73, Method: Composition-based stats.
Identities = 116/517 (22%), Positives = 191/517 (37%), Gaps = 71/517 (14%)
Query 81 EKRRRDKMNSFIDELASL----VPTCNAMSRKLDKLTVLRMAVQHMKTLRGAT------N 130
EKRRR++ + +I+ELA L + + + K DK +L+ V+ ++ ++ +
Sbjct 34 EKRRREQESKYIEELAELISANLSDIDNFNVKPDKCAILKETVRQIRQIKEQGKTISNDD 93
Query 131 PYTEANYKPT---FLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDL 187
+A+ T + D L L+L+A DGFLFVV D G I+FVSE+V + L Y Q DL
Sbjct 94 DVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRD-GNIVFVSENVTQYLQYKQEDL 152
Query 188 IGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSF 247
+ S+++ LH +D + L S G+ + S +F
Sbjct 153 VNTSVYNILHEEDRKDFLKNLPKSTV----------NGVSWTNETQRQKS-------HTF 195
Query 248 FCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNE 307
CRM P +ED + ++ + F S P M ED +
Sbjct 196 NCRMLMKTPHDILEDINASPEMRQRYETMQCFAL--------SQPRAMMEEGEDLQ---- 243
Query 308 GCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
SC++ + R + +++RH + GK V +D + E
Sbjct 244 ----SCMICVARRITTGE-----RTFPSNPESFITRHDLSGKVVNIDTNSLRSSMRPGFE 294
Query 368 LLGTSCYEYFHQDDIG--HLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMN 425
+ C + F + G + H Q T Y+F + DG+ +T +++ F N
Sbjct 295 DIIRRCIQRFFSLNDGQSWSQKRHYQEAYLNGHAETPVYRFSLADGTIVTAQTKSKLFRN 354
Query 426 PWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIP 485
P T + VST+ L G P + + S GG + +P
Sbjct 355 PVTNDRHGFVSTH--FLQREQNGYRPNPNPVGQGIRPPMAGCNSSVGGMSMSPNQGLQMP 412
Query 486 GGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGGT 545
G + M R GSS + L +S LN +
Sbjct 413 SSRAYG---LADPSTTGQMSGARYGGSSNIA----SLTPGPGMQSPSSYQNNNYGLNMSS 465
Query 546 PDIPSSGL--------LSGQAQENPGYPYSDSSSILG 574
P S GL +S + + +P S + G
Sbjct 466 PPHGSPGLAPNQQNIMISPRNRGSPKIASHQFSPVAG 502
>sp|O70361|PER3_MOUSE Period circadian protein homolog 3 OS=Mus
musculus OX=10090 GN=Per3 PE=1 SV=2
Length=1113
Score = 257 bits (656), Expect = 7e-73, Method: Composition-based stats.
Identities = 92/398 (23%), Positives = 155/398 (39%), Gaps = 56/398 (14%)
Query 76 AHSQIEKRRR--DKMNSFIDELASLVPT-CNAMSRKLDKLT-VLRM--AVQHMKTLRGAT 129
+HS+ E R R +++ + E+ P + LD L LR +VQ +
Sbjct 40 SHSEHEDRNRMSEELIMVVQEMKKYFPAERHTKPSTLDALNYALRCVHSVQANSDFFQSL 99
Query 130 NPYTEANYKPTFLSDDELK----HLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQN 185
P T S ++L + D F V G+++ +SE ILN +
Sbjct 100 GPRGAHQADVTVYSLEDLTALASEHTSKNTDTFAAVFSFLSGRLVHISEQAALILNSKRG 159
Query 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARR 245
L D L P+D+ A T LP + T S+ +
Sbjct 160 FLKSVHFVDLLAPQDVRAFYAH-------------TAPTQLPFWNNWTQRASQYECAPAK 206
Query 246 SFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPD 305
FFCR+ C +++ + YL + + +P+
Sbjct 207 PFFCRI-----------------CGGGDREKRHYSPFRILPYL-------VHVHSSAQPE 242
Query 306 NEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLP 365
E C CL + ++HS I V + + H F+ VD+RA +L YLP
Sbjct 243 PEPC---CLTLVEKIHSGYEAPR----IPVDKRIFTTTHTPGCVFLEVDERAVPLLGYLP 295
Query 366 QELLGTSCYEYFHQDDIGHLAECHRQVLQTRE--KITTNCYKFKIKDGSFITLRSRWFSF 423
Q+L+GTS Y H +D + H++VL+ + +F ++G ++ L S W SF
Sbjct 296 QDLIGTSILTYLHPEDRPLMVAIHQKVLKYAGHPPFEHSPVRFCTQNGEYVILDSSWSSF 355
Query 424 MNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPH 461
+NPW+++V +I+ + V + + E T + AS
Sbjct 356 VNPWSRKVSFIIGRHKVRTSPLNEDVFATRIKKAASND 393
>sp|P56645|PER3_HUMAN Period circadian protein homolog 3 OS=Homo
sapiens OX=9606 GN=PER3 PE=1 SV=4
Length=1201
Score = 247 bits (631), Expect = 3e-69, Method: Composition-based stats.
Identities = 90/420 (21%), Positives = 160/420 (38%), Gaps = 57/420 (14%)
Query 40 KGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRR--DKMNSFIDELAS 97
G E++ + G E + K A +HS+ + R R +++ + E+
Sbjct 9 PGRRGAKDEAL----GEESGERWSPEFHLQRKLADSSHSEQQDRNRVSEELIMVVQEMKK 64
Query 98 LVPT-CNAMSRKLDKLT-VLRM--AVQHMKTLRGATNPYTEANYKPTFLSDDEL----KH 149
P+ LD L LR +VQ + + S +EL
Sbjct 65 YFPSERRNKPSTLDALNYALRCVHSVQANSEFFQILSQNGAPQADVSMYSLEELATIASE 124
Query 150 LILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLS 209
+ D F+ V G+++ +SE ILN ++ L D L P+D+
Sbjct 125 HTSKNTDTFVAVFSFLSGRLVHISEQAALILNRKKDVLASSHFVDLLAPQDMRVFYAH-- 182
Query 210 SSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTC 269
A+ LP + T +R + FFCR++
Sbjct 183 -----------TARAQLPFWNNWTQRAARYECAPVKPFFCRIR----------------G 215
Query 270 SKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPV 329
+ + K YL + + +P+ E CL + ++HS
Sbjct 216 GEDRKQEKCHSPFRIIPYL-------IHVHHPAQPELE-SEPCCLTVVEKIHSGYEAPR- 266
Query 330 NGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECH 389
I V + + H F+ VD++A +L YLPQ+L+GTS Y H +D + H
Sbjct 267 ---IPVNKRIFTTTHTPGCVFLEVDEKAVPLLGYLPQDLIGTSILSYLHPEDRSLMVAIH 323
Query 390 RQVLQTRE--KITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLE 447
++VL+ + +F ++G +I L S W SF+NPW++++ +I+ + V + + E
Sbjct 324 QKVLKYAGHPPFEHSPIRFCTQNGDYIILDSSWSSFVNPWSRKISFIIGRHKVRTSPLNE 383
>sp|O09000|NCOA3_MOUSE Nuclear receptor coactivator 3 OS=Mus musculus
OX=10090 GN=Ncoa3 PE=1 SV=2
Length=1398
Score = 236 bits (602), Expect = 3e-65, Method: Composition-based stats.
Identities = 110/524 (21%), Positives = 188/524 (36%), Gaps = 85/524 (16%)
Query 81 EKRRRDKMNSFIDELASL----VPTCNAMSRKLDKLTVLRMAVQHMKTLRGAT------N 130
EK RR++ + +I+ELA L + + + K DK +L+ V+ ++ ++ +
Sbjct 35 EKWRREQESKYIEELAELISANLSDIDNFNVKPDKCAILKETVRQIRQIKEQGKTISSDD 94
Query 131 PYTEANYKPT---FLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDL 187
+A+ T + D L L+L+A DGFLFVV D G I+FVSE+V + L Y Q DL
Sbjct 95 DVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRD-GNIVFVSENVTQYLQYKQEDL 153
Query 188 IGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSF 247
+ S++ LH L++ + K
Sbjct 154 VNTSVYSILHEPRRKDF---LNTYQNPQLMEFLGLMRTRDKKAPYI-------------L 197
Query 248 FCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNE 307
RM + + P R+ + T+ + S P + ED +
Sbjct 198 IVRMLMKTHDILEDVNASP-------ETRQRYETMQC--FALSQPRAMLEEGEDLQ---- 244
Query 308 GCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
C++ + R + P +++RH + GK V +D + E
Sbjct 245 ----CCMICVARRVTAPFPSS--------PESFITRHDLSGKVVNIDTNSLRSSMRPGFE 292
Query 368 LLGTSCYEYFHQDDIG--HLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMN 425
+ C + F + G + H Q T Y+F + DG+ ++ +++ F N
Sbjct 293 DIIRRCIQRFFSLNDGQSWSQKRHYQEAYVHGHAETPVYRFSLADGTIVSAQTKSKLFRN 352
Query 426 PWTKEVEYIVSTNTVVLANVLEGGDPT--------FPQLTASPHSMDSMLPSGEGGPKRT 477
P T + +ST+ L G P P SM G +
Sbjct 353 PVTNDRHGFISTH--FLQREQNGYRPNPIPQDKGIRPPAAGCGVSMSPNQNVQMMGSRTY 410
Query 478 HPTVP---GIPGGTRAGAGKIGRMIAEEIMEIHRIRG-SSPSSCGSSPLNITSTPPP--- 530
P G GG R GA + + + SPSS +S ++ + PP
Sbjct 411 GVPDPSNTGQMGGARYGASS-------SVASLTPGQSLQSPSSYQNSSYGLSMSSPPHGS 463
Query 531 DASSPGGKKIL----NGGTPDIPSSGLLSGQAQENPGYPYSDSS 570
P + I+ N G+P + S +P P ++
Sbjct 464 PGLGPNQQNIMISPRNRGSPKMASHQFSPAAGAHSPMGPSGNTG 507
>sp|Q03355|PER_DROSI Period circadian protein (Fragments) OS=Drosophila
simulans OX=7240 GN=per PE=3 SV=2
Length=656
Score = 227 bits (579), Expect = 1e-64, Method: Composition-based stats.
Identities = 88/400 (22%), Positives = 150/400 (38%), Gaps = 56/400 (14%)
Query 156 DGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAP 215
D F V+ G +L+ + S+ +L Y ++ +G+S D++H KD A Q++
Sbjct 224 DSFCCVISMHDGIVLYTTPSITDVLGYPRDMWLGRSFIDFVHLKDRATFASQIT------ 277
Query 216 RERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKAD 275
TG+P+ P +S FC M +
Sbjct 278 --------TGIPIAESRGSVPKDA-----KSTFCVMLR----------------RYRGLK 308
Query 276 RKSFCTIHSTGYLKSWPPTKMGLDEDNEPD---------NEGCNLSCLVAIGRLHSHVVP 326
F I G S+ P ++GL P+ + G N+ ++ + S
Sbjct 309 SGGFGVI---GRPVSYEPFRLGLTFREAPEEARPDNYMVSNGTNMLLVICATPIKSSYKV 365
Query 327 QPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLA 386
+ + KS ++ RH G VD A + L YLPQ+L+G S +++H +D+ +
Sbjct 366 P--DEILSQKSPKFAIRHTATGIISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMK 423
Query 387 ECHRQVLQTRE----KITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVL 442
E + V++ + + Y+F I++G ++ L + W SF+NPW++++E++V + V
Sbjct 424 ETYETVMKKGQTAGASFCSKPYRFLIQNGCYVLLETEWTSFVNPWSRKLEFVVGHHRVFQ 483
Query 443 ANVLEGGDPTFP--QLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIA 500
P +L S + E KR TV P T
Sbjct 484 GPKQCNVFEAAPTCKLKISEEAQSRNTRIKEDIVKRLAETV-SRPSDTVKQEVSRRCQAL 542
Query 501 EEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
ME S S N T+ SS I
Sbjct 543 ASFMETLMDEVSRADLKSGSSGNFTTASNIHMSSVTNTSI 582
>sp|Q25637|PER_PERAM Period circadian protein OS=Periplaneta americana
OX=6978 GN=per PE=2 SV=2
Length=893
Score = 230 bits (587), Expect = 3e-64, Method: Composition-based stats.
Identities = 74/364 (20%), Positives = 143/364 (39%), Gaps = 43/364 (12%)
Query 100 PTCNAMSRKLDKLTVLRMAVQHMKTLRGAT----NPYTEANYKPTFLSDDELKHLI---- 151
P + ++ LT +++ MK ++ + ++ +++++ +H+
Sbjct 160 PGPENEAHQMASLTQTLNSIKKMKKMKDLSTDIPEETEGHSFSLPMVAEEKEEHIRNSFD 219
Query 152 ----LRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQ 207
F VV G ++F + S+ ++ + ++ +G+S D++HP+D
Sbjct 220 AEPPAHNEGEFCVVVSMQDGVVVFTTPSITDVVGFPKDMWLGRSFIDFVHPRDRTAFANH 279
Query 208 LSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPS 267
++S P P K SF+C ++ R S
Sbjct 280 ITSGVITPLSNSNPKGGSHPGKN---------------SFYCCLRRYR--------GLKS 316
Query 268 TCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNE----GCNLSCLVAIGRLHSH 323
T S+ + P L+ + E GCN LV +L
Sbjct 317 TGYGVTEKEVSYLPFQLNMTFRELLPHSNPLEVEGNTSPESVPGGCNSMFLVITAKLICS 376
Query 324 VVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIG 383
S ++V+RH K +VD L YLP E+LG S +++H +D+
Sbjct 377 AYKHAGE---TCASPKFVTRHLATCKLNYVDPECMPYLGYLPHEMLGNSVLDFYHPEDLP 433
Query 384 HLAECHRQVLQTRE-KITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVL 442
L E ++ V+Q + Y+F+ +G +I L + W SF+NPW+K++E++V + V+
Sbjct 434 FLKEVYQIVMQENGAPFRSKPYRFRSHNGGYILLETEWSSFVNPWSKKLEFVVGQHRVLK 493
Query 443 ANVL 446
Sbjct 494 GPEN 497
>sp|P70365|NCOA1_MOUSE Nuclear receptor coactivator 1 OS=Mus musculus
OX=10090 GN=Ncoa1 PE=1 SV=2
Length=1447
Score = 230 bits (587), Expect = 3e-63, Method: Composition-based stats.
Identities = 107/581 (18%), Positives = 201/581 (35%), Gaps = 94/581 (16%)
Query 55 DDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT----CNAMSRKLD 110
D H+ + S EKRRR++ N +++ELA L+ +++S K D
Sbjct 6 DSSSDPANPDSHKRKGSPCDTLASSTEKRRREQENKYLEELAELLSANISDIDSLSVKPD 65
Query 111 KLTVLRMAVQHMKTLRGATNPYTE----------ANYKPTFLSDDELKHLILRAADGFLF 160
K +L+ V ++ ++ + ++ + + L L+L A DGF F
Sbjct 66 KCKILKKTVDQIQLMKRMEQEKSTTDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFF 125
Query 161 VVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLI 220
VV C+ G+I+FVSE+V L Y+Q +L+ S++ LH D A+ + L
Sbjct 126 VVNCE-GRIVFVSENVTSYLGYNQEELMNTSVYSILHVGDHAEFVKNLLPKSL------- 177
Query 221 DAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFC 280
+ P P +F CRM + P P T +++ R +
Sbjct 178 ---------VNGVPWPQEATRRNSHTFNCRMLIHPPED-------PGTENQEACQR--YE 219
Query 281 TIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEY 340
+ + S P + ED + SCL+ I R +P+P +
Sbjct 220 VMQC--FTVSQPKSIQEDGEDFQ--------SCLICIARR----LPRPPAI---TGVESF 262
Query 341 VSRHAIDGKFVFVDQRATAILAYLPQELLGTSC-YEYFHQDDIGHLAECHRQVLQ---TR 396
+++ GK + +D + E L C Y +F G RQ+ Q TR
Sbjct 263 MTKQDTTGKIISIDTSSLRAAGRTGWEDLVRKCIYAFFQPQ--GREPSYARQLFQEVMTR 320
Query 397 EKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDP----- 451
++ Y+F + DG+ ++ ++ +I+ + ++ G P
Sbjct 321 GTASSPSYRFILNDGTMLSAHTKCKLCYPQSPDMQPFIMGIH--IIDREHSGLSPQDDSN 378
Query 452 ---TFPQLTAS-----------------PHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAG 491
+ P++ S P S ++M+ + + + +
Sbjct 379 SGMSIPRINPSVNPGISPAHGVTRSSTLPPSNNNMVSARVNRQQSSDLNSSSSHTNSSNN 438
Query 492 AGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGGTPDIPSS 551
G G +I+ + S S+P + P + + L+ +
Sbjct 439 QGNFGCSPGNQIVANVALNQGQAGSQSSNPSLNLNNSPMEGTGIA----LSQFMSPRRQA 494
Query 552 GLLSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSS 592
+ + L I +N+ S S
Sbjct 495 NSGLATRARMSNNSFPPNIPTLSSPVGITSGACNNNNRSYS 535
>sp|Q03354|PER_DROSE Period circadian protein (Fragments) OS=Drosophila
sechellia OX=7238 GN=per PE=3 SV=2
Length=661
Score = 224 bits (570), Expect = 3e-63, Method: Composition-based stats.
Identities = 72/331 (22%), Positives = 137/331 (41%), Gaps = 57/331 (17%)
Query 156 DGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAP 215
D F V+ G +L+ + S+ +L Y ++ +G+S D++H KD A Q++
Sbjct 223 DSFCCVISMHDGIVLYTTPSITDVLGYPRDMWLGRSFIDFVHLKDRATFASQIT------ 276
Query 216 RERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKAD 275
TG+P+ P +S FC M +
Sbjct 277 --------TGIPIAESRGSVPKDA-----KSTFCVMLR----------------RYRGLK 307
Query 276 RKSFCTIHSTGYLKSWPPTKMGLDEDNEPD---------NEGCNLSCLVAIGRLHSHVVP 326
F I G S+ P ++GL P+ + G N+ ++ + S
Sbjct 308 SGGFGVI---GRPVSYEPFRLGLTFREAPEEARPDNYMVSNGTNMLLVICATPIKSSYKV 364
Query 327 QPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLA 386
+ + KS ++ RH G VD A + L YLPQ+L+G S +++H +D+ +
Sbjct 365 P--DEILSQKSPKFAIRHTATGIISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMK 422
Query 387 ECHRQVLQTRE----KITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVL 442
E + V++ + + Y+F I++G ++ L + W SF+NPW++++E++V + V
Sbjct 423 ETYETVMKKGQTAGASFCSKPYRFLIQNGCYVLLETEWTSFVNPWSRKLEFVVGHHRVFQ 482
Query 443 AN----VLEGGDPTFPQLTASPHSMDSMLPS 469
V E +++ S ++ +
Sbjct 483 GPKQCNVFEAAPTCKLKISEEAQSRNTRIKE 513
>sp|Q03353|PER_DROMA Period circadian protein (Fragments) OS=Drosophila
mauritiana OX=7226 GN=per PE=3 SV=2
Length=676
Score = 224 bits (570), Expect = 3e-63, Method: Composition-based stats.
Identities = 72/331 (22%), Positives = 137/331 (41%), Gaps = 57/331 (17%)
Query 156 DGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAP 215
D F V+ G +L+ + S+ +L Y ++ +G+S D++H KD A Q++
Sbjct 224 DSFCCVISMHDGIVLYTTPSITDVLGYPRDMWLGRSFIDFVHLKDRATFASQIT------ 277
Query 216 RERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKAD 275
TG+P+ P +S FC M +
Sbjct 278 --------TGIPIAESRGSVPKDA-----KSTFCVMLR----------------RYRGLK 308
Query 276 RKSFCTIHSTGYLKSWPPTKMGLDEDNEPD---------NEGCNLSCLVAIGRLHSHVVP 326
F I G S+ P ++GL P+ + G N+ ++ + S
Sbjct 309 SGGFGVI---GRPVSYEPFRLGLTFREAPEEARPDNYMVSNGTNMLLVICATPIKSSYKV 365
Query 327 QPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLA 386
+ + KS ++ RH G VD A + L YLPQ+L+G S +++H +D+ +
Sbjct 366 P--DEILSQKSPKFAIRHTATGIISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMK 423
Query 387 ECHRQVLQTRE----KITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVL 442
E + V++ + + Y+F I++G ++ L + W SF+NPW++++E++V + V
Sbjct 424 ETYETVMKKGQTAGASFCSKPYRFLIQNGCYVLLETEWTSFVNPWSRKLEFVVGHHRVFQ 483
Query 443 AN----VLEGGDPTFPQLTASPHSMDSMLPS 469
V E +++ S ++ +
Sbjct 484 GPKQCNVFEAAPTCKLKISEEAQSRNTRIKE 514
>sp|Q15788|NCOA1_HUMAN Nuclear receptor coactivator 1 OS=Homo
sapiens OX=9606 GN=NCOA1 PE=1 SV=3
Length=1441
Score = 228 bits (581), Expect = 1e-62, Method: Composition-based stats.
Identities = 95/433 (22%), Positives = 168/433 (39%), Gaps = 67/433 (15%)
Query 55 DDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT----CNAMSRKLD 110
D H+ + S EKRRR++ N +++ELA L+ +++S K D
Sbjct 6 DSSSDPANPDSHKRKGSPCDTLASSTEKRRREQENKYLEELAELLSANISDIDSLSVKPD 65
Query 111 KLTVLRMAVQHMKTLRGATNPYTE----------ANYKPTFLSDDELKHLILRAADGFLF 160
K +L+ V ++ ++ + ++ + + L L+L A DGF F
Sbjct 66 KCKILKKTVDQIQLMKRMEQEKSTTDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFF 125
Query 161 VVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLI 220
VV C+ G+I+FVSE+V L Y+Q +L+ S++ LH D A+ + L
Sbjct 126 VVNCE-GRIVFVSENVTSYLGYNQEELMNTSVYSILHVGDHAEFVKNLLPKSL------- 177
Query 221 DAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFC 280
+ P P +F CRM + P D P T +++ R +
Sbjct 178 ---------VNGVPWPQEATRRNSHTFNCRMLIHPP-------DEPGTENQEACQR--YE 219
Query 281 TIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEY 340
+ + S P + ED + SCL+ I R +P+P +
Sbjct 220 VMQC--FTVSQPKSIQEDGEDFQ--------SCLICIARR----LPRPPAI---TGVESF 262
Query 341 VSRHAIDGKFVFVDQRATAILAYLPQELLGTSC-YEYFHQDDIGHLAECHRQVLQ---TR 396
+++ GK + +D + E L C Y +F G RQ+ Q TR
Sbjct 263 MTKQDTTGKIISIDTSSLRAAGRTGWEDLVRKCIYAFFQPQ--GREPSYARQLFQEVMTR 320
Query 397 EKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQL 456
++ Y+F + DG+ ++ ++ +I+ + ++ G P
Sbjct 321 GTASSPSYRFILNDGTMLSAHTKCKLCYPQSPDMQPFIMGIH--IIDREHSGLSPQDD-- 376
Query 457 TASPHSMDSMLPS 469
T S S+ + PS
Sbjct 377 TNSGMSIPRVNPS 389
>sp|Q4PJW2|NCOA1_PIG Nuclear receptor coactivator 1 OS=Sus scrofa
OX=9823 GN=NCOA1 PE=2 SV=1
Length=1440
Score = 227 bits (579), Expect = 3e-62, Method: Composition-based stats.
Identities = 92/433 (21%), Positives = 166/433 (38%), Gaps = 67/433 (15%)
Query 55 DDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT----CNAMSRKLD 110
D H+ + S EKRRR++ N +++ELA L+ +++S K D
Sbjct 6 DSSSDPANPDSHKRKGSPCDTLASSTEKRRREQENKYLEELAELLSANISDIDSLSVKPD 65
Query 111 KLTVLRMAVQHMKTLRGATNPYTE----------ANYKPTFLSDDELKHLILRAADGFLF 160
K +L+ V ++ ++ + ++ + + L L+L A DGF F
Sbjct 66 KCKILKKTVDQIQLMKRMEQEKSTTDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFF 125
Query 161 VVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLI 220
VV C+ G+I+FVSE+V L Y+Q +L+ S++ LH D A+ + L
Sbjct 126 VVNCE-GRIVFVSENVTSYLGYNQEELMNTSVYSILHVGDHAEFVKNLLPKSL------- 177
Query 221 DAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFC 280
+ P P +F CRM + P D P T +++ R +
Sbjct 178 ---------VNGVPWPQEATRRNSHTFNCRMLIHPP-------DEPGTENQEACQR--YE 219
Query 281 TIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEY 340
+ + S P + ED + SCL+ I R +P+P +
Sbjct 220 VMQC--FTVSQPKSIQEDGEDFQ--------SCLICIARR----LPRPPAIM---GVESF 262
Query 341 VSRHAIDGKFVFVDQRATAILAYLPQ-ELLGTSCYEYFHQDDIGHLAECHRQVLQ---TR 396
+++ GK + +D + E + Y +F G RQ+ Q TR
Sbjct 263 MTKQDTTGKIISIDTSSLRAAGRTGWEEFMRKCIYAFFQPQ--GREPSYARQLFQEVMTR 320
Query 397 EKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQL 456
++ Y+F + DG+ ++ ++ +I+ + ++ G P
Sbjct 321 GTASSPSYRFILNDGTMLSAHTKCKLCYPQSPDMQPFIMGIH--IIDREHSGLSPQDD-- 376
Query 457 TASPHSMDSMLPS 469
T S S+ + P
Sbjct 377 TNSGMSIPRVNPP 389
>sp|Q17062|PER_ANTPE Period circadian protein OS=Antheraea pernyi
OX=7119 GN=per PE=2 SV=1
Length=849
Score = 219 bits (557), Expect = 2e-60, Method: Composition-based stats.
Identities = 65/378 (17%), Positives = 153/378 (40%), Gaps = 45/378 (12%)
Query 98 LVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADG 157
LVP+ + + + + +A+ + Y + P + L +G
Sbjct 110 LVPSPKQTLQTDNDIADIEVAIPDTNNDKEEAIVYNTSLINPG--TACPFGRPALSNCNG 167
Query 158 FLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRE 217
F V+ G +L+ + S+ L + ++ +G+S D++HP+D Q+++ P+
Sbjct 168 FSCVISMHDGVVLYATASLTSTLGFPKDMWVGRSFIDFVHPRDRNTFASQITNELAIPKI 227
Query 218 RLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRK 277
+ +T +T PG + CR++ R +C +
Sbjct 228 VSLTEETD---QTMENPGS---------TMVCRIRRYRGL----------SCGFSVKNTT 265
Query 278 SFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKS 337
+ ++ P + N +++G + ++ S + E+ K+
Sbjct 266 T-----------AYLPFLLKFKFKNVNEDKGNVIYLVIQAVPFFSAF---KTSNEVLAKT 311
Query 338 MEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTRE 397
+ +V RH+ DG ++D + L YLPQ++ +H D+G+L E + +++
Sbjct 312 VSFVIRHSADGNLEYIDAESVPYLGYLPQDITNRDALLLYHPGDLGYLQEIYGSLVKEGN 371
Query 398 KITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLT 457
+ Y+ ++G ++ + + W +F+NPW+K++E++ + ++ P P +
Sbjct 372 VTRSKTYRMMTQNGHYMKVETEWSAFINPWSKKLEFVTGKHYIIEG-------PANPDVF 424
Query 458 ASPHSMDSMLPSGEGGPK 475
+P ++ + + K
Sbjct 425 QNPENVLKLTEEQKNQAK 442
>sp|Q25020|PER_HYACE Period circadian protein (Fragment) OS=Hyalophora
cecropia OX=7123 GN=per PE=2 SV=1
Length=358
Score = 207 bits (526), Expect = 7e-60, Method: Composition-based stats.
Identities = 54/295 (18%), Positives = 119/295 (40%), Gaps = 43/295 (15%)
Query 167 GKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGL 226
G +++ + S+ L + ++ IG+S D+LHPKD Q+++ +
Sbjct 1 GVVMYTTSSITATLGFPKDMWIGRSFIDFLHPKDANTFASQITNGLA------------I 48
Query 227 PVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTG 286
P + T +++ + CR++ R S+ K
Sbjct 49 PKIVNDTQEKAQIFGTQGSTMVCRIRRYRGL---------SSGFGVKDTS---------- 89
Query 287 YLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAI 346
S+ P + N D++G + ++ S EI + + ++ RH+
Sbjct 90 --VSYMPFLLKFRFRNISDDKGLVVYLVIQTVPFFSAY---KTPNEILTQEVSFIMRHSA 144
Query 347 DGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKF 406
+G ++D L Y+PQ++ + +H D+ L E ++ +++ + Y+
Sbjct 145 NGNLEYIDPDCVPYLGYIPQDITNRNALVLYHPGDLPFLQEVYQAIVKEGSVTRSKSYRM 204
Query 407 KIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPH 461
++G FI + + W +F+NPW++++E++ ++ P P + SP
Sbjct 205 VTQNGHFIKVETEWSAFINPWSRKLEFVNGKYYIIEG-------PANPDVFESPD 252
>sp|Q03297|PER_DROWI Period circadian protein (Fragment) OS=Drosophila
willistoni OX=7260 GN=per PE=3 SV=2
Length=1093
Score = 217 bits (551), Expect = 8e-59, Method: Composition-based stats.
Identities = 72/331 (22%), Positives = 141/331 (43%), Gaps = 57/331 (17%)
Query 156 DGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAP 215
+ F V+ G +L+ + S+ +L + ++ +G+S D++H KD A Q++
Sbjct 150 ESFCCVISMHDGIVLYTTPSISDVLGFPRDMWLGRSFVDFVHHKDRATFASQIT------ 203
Query 216 RERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKAD 275
TG+P+ P RS FC M + +
Sbjct 204 --------TGIPIAESRGCMPKDA-----RSTFCVMLR----------------RYRGLN 234
Query 276 RKSFCTIHSTGYLKSWPPTKMGLDEDNEPD---------NEGCNLSCLVAIGRLHSHVVP 326
F I G ++ P ++GL P+ + G N+ ++ + S
Sbjct 235 SGGFGVI---GRAVNYEPFRLGLTFREAPEEARPDNYMVSNGTNMLLVICATPIKSSYKV 291
Query 327 QPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLA 386
+ + KS ++ RH G VD A + L YLPQ+L+G S +++H +D+ +
Sbjct 292 P--DEILSQKSPKFAIRHTATGIISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMK 349
Query 387 ECHRQVLQTRE----KITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV- 441
+ + V++ + + Y+F I++G F+ L + W SF+NPW++++E++V + V
Sbjct 350 DTYETVMKKGQTAGASFCSKPYRFLIQNGCFVLLETEWTSFVNPWSRKLEFVVGHHRVFQ 409
Query 442 ---LANVLEGGDPTFPQLTASPHSMDSMLPS 469
L NV E P+++ + ++ +
Sbjct 410 GPKLCNVFETSVSAKPKISEEAQNRNARIKE 440
>sp|Q25478|PER_MANSE Period circadian protein (Fragment) OS=Manduca
sexta OX=7130 GN=per PE=2 SV=1
Length=354
Score = 200 bits (508), Expect = 2e-57, Method: Composition-based stats.
Identities = 62/310 (20%), Positives = 130/310 (42%), Gaps = 48/310 (15%)
Query 167 GKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGL 226
G +++ + S+ L + ++ IG+S D++HP+D Q++S P+ + G
Sbjct 1 GIVMYTTSSLTTTLGFPKDMWIGRSFIDFVHPRDRNTFASQITSGLAVPK-IVNGQSPGN 59
Query 227 PVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTG 286
P T + CR++ R T DR
Sbjct 60 PASTMV----------------CRIRRYRGL----------TTGFGVKDR---------- 83
Query 287 YLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAI 346
+ ++ P + N D EG + ++ + S + E+ K++ +V RHA
Sbjct 84 -VVTFMPFLLKFTFKNVSDEEGKVIYLVIQATQFFSAF---RIPSEVVSKAVPFVMRHAA 139
Query 347 DGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKF 406
+G ++D + L YLPQ++ + +H +D+ +L + + +++ T Y+
Sbjct 140 NGNLEYIDPESVPYLGYLPQDVTDKDALQLYHPEDLDYLQQVYETIVKEGGVPRTKAYRM 199
Query 407 KIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSM 466
++G ++ L + W SF+NPW+K +++++ + ++ P+ P + SP ++
Sbjct 200 MAQNGDYLKLETEWSSFINPWSKRLDFVIGKHHIIEG-------PSNPDVFQSPDPEKAV 252
Query 467 LPSGEGGPKR 476
S E K
Sbjct 253 AMSEEEKAKE 262
>sp|G5EFL9|NPASH_CAEEL PAS domain-containing protein cky-1 OS=Caenorhabditis
elegans OX=6239 GN=cky-1 PE=1 SV=1
Length=676
Score = 208 bits (528), Expect = 3e-57, Method: Composition-based stats.
Identities = 77/425 (18%), Positives = 156/425 (37%), Gaps = 65/425 (15%)
Query 76 AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA 135
+ K+RRD++N I +L L+P + + +L +L V+ + ++ R
Sbjct 80 STRGASKQRRDQINVEIQKLRDLLPLSDLIKDRLFQLQVMSLGCIFIRKHRYQQTVLQPQ 139
Query 136 NYKPTFLSDDELKHLI--LRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI--GQS 191
+ I +A GF+ +V GKIL VS++ + L +S +++ G S
Sbjct 140 LQMLQMQMSSPMPRGIDICKALRGFMLMVT-RSGKILHVSDNASEYLGHSVEEIMCQGDS 198
Query 192 LFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRM 251
++D + +D V+ +L+S P R F CR+
Sbjct 199 IYDLVDGRDHGAVQAELASGP-----------------------PGAATFPEERVFICRL 235
Query 252 KCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNL 311
R +K++ F Y++ + ++++PD C+
Sbjct 236 NLART-------------AKRQLQYHKFVLFQGR-YIQPAEFYQQLNAQNSQPD---CDQ 278
Query 312 SCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGT 371
A + P+ G + + ++H +D KF D A+ L + ++L G
Sbjct 279 PVFSAYC--QPLINPENAEGMSTGNTHVFSTQHYLDMKFKEADTMASQHLGFSKEQLKGM 336
Query 372 SCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSF----MNPW 427
S Y H + + +A HR + Q +E + + +G +I L + + +N
Sbjct 337 SWYGMIHPNHVPEIAHKHRLLCQEKEGSVLALIRLQAANGEWIWLHTVFSIRPNNELNSD 396
Query 428 TKEVEYIV-STNTVVL---------ANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRT 477
K + +++ + + + + T+P + + S P E +
Sbjct 397 GKRLRHVIHCFHQKLTDLEAATLQANSWIYSMRHTYPTVFSCQDS----PPPSEEQQPSS 452
Query 478 HPTVP 482
T P
Sbjct 453 PQTPP 457
>sp|P07663|PER_DROME Period circadian protein OS=Drosophila melanogaster
OX=7227 GN=per PE=1 SV=2
Length=1224
Score = 211 bits (537), Expect = 8e-57, Method: Composition-based stats.
Identities = 72/331 (22%), Positives = 137/331 (41%), Gaps = 57/331 (17%)
Query 156 DGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAP 215
D F V+ G +L+ + S+ +L Y ++ +G+S D++H KD A Q++
Sbjct 238 DSFCCVISMHDGIVLYTTPSITDVLGYPRDMWLGRSFIDFVHLKDRATFASQIT------ 291
Query 216 RERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKAD 275
TG+P+ P +S FC M +
Sbjct 292 --------TGIPIAESRGSVPKDA-----KSTFCVMLR----------------RYRGLK 322
Query 276 RKSFCTIHSTGYLKSWPPTKMGLDEDNEPD---------NEGCNLSCLVAIGRLHSHVVP 326
F I G S+ P ++GL P+ + G N+ ++ + S
Sbjct 323 SGGFGVI---GRPVSYEPFRLGLTFREAPEEARPDNYMVSNGTNMLLVICATPIKSSYKV 379
Query 327 QPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLA 386
+ + KS ++ RH G VD A + L YLPQ+L+G S +++H +D+ +
Sbjct 380 P--DEILSQKSPKFAIRHTATGIISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMK 437
Query 387 ECHRQVLQTRE----KITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVL 442
E + V++ + + Y+F I++G ++ L + W SF+NPW++++E++V + V
Sbjct 438 ETYETVMKKGQTAGASFCSKPYRFLIQNGCYVLLETEWTSFVNPWSRKLEFVVGHHRVFQ 497
Query 443 AN----VLEGGDPTFPQLTASPHSMDSMLPS 469
V E +++ S ++ +
Sbjct 498 GPKQCNVFEAAPTCKLKISEEAQSRNTRIKE 528
>sp|Q24767|PER_DROYA Period circadian protein OS=Drosophila yakuba
OX=7245 GN=per PE=3 SV=1
Length=1208
Score = 210 bits (535), Expect = 1e-56, Method: Composition-based stats.
Identities = 72/331 (22%), Positives = 138/331 (42%), Gaps = 57/331 (17%)
Query 156 DGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAP 215
+ F V+ G +L+ + S+ +L Y ++ +G+S D++H KD A Q++
Sbjct 242 ESFCCVISMHDGIVLYTTPSITDVLGYPRDMWLGRSFIDFVHLKDRATFASQIT------ 295
Query 216 RERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKAD 275
TG+P+ P +S FC M +
Sbjct 296 --------TGIPIAESRGSVPKDT-----KSTFCVMLR----------------RYRGLK 326
Query 276 RKSFCTIHSTGYLKSWPPTKMGLDEDNEPD---------NEGCNLSCLVAIGRLHSHVVP 326
F I G S+ P ++GL P+ + G N+ ++ + S
Sbjct 327 SGGFGVI---GRPVSYEPFRLGLTFREAPEEARPDNYMVSNGTNMLLVICATPIKSSYKI 383
Query 327 QPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLA 386
+ + KS ++ RH G VD A + L YLPQ+L+G S +++HQ+D+ +
Sbjct 384 P--DEILSQKSPKFAIRHTATGIISHVDSAAVSALGYLPQDLIGRSIMDFYHQEDLSVMK 441
Query 387 ECHRQVLQTRE----KITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVL 442
E + V++ + + Y+F I++G ++ L + W SF+NPW++++E++V + V
Sbjct 442 ETYEMVMKKGQTAGASFCSKPYRFLIQNGCYVLLETEWTSFVNPWSRKLEFVVGHHRVFQ 501
Query 443 AN----VLEGGDPTFPQLTASPHSMDSMLPS 469
V E +++ S ++ +
Sbjct 502 GPKSCNVFEAAPTCKLKMSEEAQSRNTRIKE 532
Score = 37.6 bits (85), Expect = 0.44, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (2%)
Query 148 KHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKE 206
++ + + F + G I V + L Y DLIG+S+ D+ H +D++ +KE
Sbjct 385 DEILSQKSPKFA-IRHTATGIISHVDSAAVSALGYLPQDLIGRSIMDFYHQEDLSVMKE 442
>sp|P12348|PER_DROPS Period circadian protein OS=Drosophila pseudoobscura
pseudoobscura OX=46245 GN=per PE=3 SV=3
Length=1271
Score = 210 bits (533), Expect = 2e-56, Method: Composition-based stats.
Identities = 72/317 (23%), Positives = 134/317 (42%), Gaps = 53/317 (17%)
Query 156 DGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAP 215
D F V+ G +L+ + S+ +L + ++ +G+S D++H KD A Q++
Sbjct 200 DSFCCVISMHDGIVLYTTPSITDVLGFPRDMWLGRSFIDFVHTKDRATFASQIT------ 253
Query 216 RERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKAD 275
TG+P+ P RS FC M +
Sbjct 254 --------TGIPIAESRCSMPKDA-----RSTFCVMLR----------------QYRGLQ 284
Query 276 RKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRV 335
+ I G ++ P ++G+ P+ E + + + + P+ RV
Sbjct 285 TSGYGVI---GRSVNYEPFRLGMSFREAPEEERSDNYMVANSSNMLLVICATPIKSSYRV 341
Query 336 -------KSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAEC 388
+S ++ RH G VD A + L YLPQ+L+G S + +H DD+ + E
Sbjct 342 PEEIHSQRSPKFAIRHTAAGIISHVDSAAVSALGYLPQDLMGRSIMDLYHHDDLPVIKEI 401
Query 389 HRQVLQTRE----KITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV--- 441
+ V++ + + Y+F I++G +I L + W SF+NPW++++E++V + V
Sbjct 402 YESVMKKGQTAGASFCSKPYRFLIQNGCYILLETEWSSFVNPWSRKLEFVVGHHRVFQGP 461
Query 442 -LANVLEGGDPTFPQLT 457
+ NV E + P++
Sbjct 462 KICNVFETPPNSEPKIA 478
>sp|P12349|PER_DROVI Period circadian protein OS=Drosophila virilis
OX=7244 GN=per PE=3 SV=1
Length=1087
Score = 201 bits (511), Expect = 1e-53, Method: Composition-based stats.
Identities = 71/335 (21%), Positives = 137/335 (41%), Gaps = 57/335 (17%)
Query 156 DGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAP 215
D F V+ G +LF + ++ ++L Y + +G+S D++H KD A Q++
Sbjct 220 DSFCCVISMHDGVVLFTTANLNEMLGYPREMWLGRSFIDFVHIKDRATFASQIT------ 273
Query 216 RERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKAD 275
TG+P+ R+ FC M +
Sbjct 274 --------TGIPIAESRCSQSKDA-----RTTFCVMLR----------------RYRGLA 304
Query 276 RKSFCTIHSTGYLKSWPPTKMGLDEDNEPD---NEGCNLSCLVAIGRLHSHVVPQPVNGE 332
F I G S+ P ++GL P+ +GC LS ++ + S + E
Sbjct 305 SGGFGII---GRPVSYAPFRLGLTFREAPEEVQPDGCTLSNATSMLLVISATPIKSCYKE 361
Query 333 I----RVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAEC 388
K ++ +H G VD A + L YLPQ+L+G S +++H +D+ + +
Sbjct 362 PDEFLSPKGPKFAIQHTAAGIISHVDTAAVSALGYLPQDLIGRSILDFYHHEDLSDIKDI 421
Query 389 HRQVLQTREKI----TTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLAN 444
+ +V++ + + + ++F I++G +I L + W SF+NPW++++E++V + V
Sbjct 422 YEKVVKKGQTVGATFCSKPFRFLIQNGCYILLETEWTSFVNPWSRKLEFVVGHHRVFQG- 480
Query 445 VLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHP 479
P + ++ +P E +
Sbjct 481 ------PKQCDVFEMSPNVTPNIPEDEQN-RNACI 508
>sp|O44712|AHR_CAEEL Aryl hydrocarbon receptor protein 1 OS=Caenorhabditis
elegans OX=6239 GN=ahr-1 PE=1 SV=1
Length=602
Score = 189 bits (480), Expect = 4e-51, Method: Composition-based stats.
Identities = 85/426 (20%), Positives = 157/426 (37%), Gaps = 83/426 (19%)
Query 65 EHQGRIKNAREAHSQI-----EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
Q K R+ Q+ KR R+++N ++ +A L+P ++ +LDKL+VLR+AV
Sbjct 6 RRQRNFKRVRDPPKQLTNTNPSKRHRERLNGELETVAMLLPYDSSTISRLDKLSVLRLAV 65
Query 120 Q------------HMKTLRGATNPYTEANYK-------------PTFLS----------- 143
H A P + +Y PT
Sbjct 66 SFLQCKAHFQACLHNSQFLSAGFPMSTHSYSYQPHPPIPFSNKVPTIFDLRIGTPMLDPE 125
Query 144 DDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAK 203
+ + + L++ GF+ V+ D G+I + SE+V L + Q+D++ Q ++D +H +D
Sbjct 126 ESNFEEISLKSLGGFILVLN-DNGEIYYASENVENYLGFHQSDVLHQPVYDLIHSEDRDD 184
Query 204 VKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDK 263
+++QL S+ P + R+ R +C
Sbjct 185 IRQQLDSNFHIPTS---------SASNQFDVFAPQNSKYLERNVNARFRCL--------- 226
Query 264 DFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSH 323
+TC + D + + G S+ MG C + V
Sbjct 227 -LDNTCGFLRIDMRG-KLMSLHGLPSSY---VMGRTASGPVLGMICVCTPFV-------- 273
Query 324 VVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIG 383
P ++ + M ++H +DG V +DQ+ +L + + L Y H +D
Sbjct 274 ---PPSTSDLASEDMILKTKHQLDGALVSMDQKVYEMLE-IDETDLPMPLYNLVHVEDAV 329
Query 384 HLAECHRQVLQTREKITTNCYKF-KIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVL 442
+AE H++ ++ Y+ K ++S F + E I T+ ++
Sbjct 330 CMAEAHKEAIKNGSSGLL-VYRLVSTKTRRTYFVQSSCRMFY--KNSKPESIGLTHRLL- 385
Query 443 ANVLEG 448
N +EG
Sbjct 386 -NEVEG 390
>sp|G5EGD2|HIF1_CAEEL Hypoxia-inducible factor 1 OS=Caenorhabditis
elegans OX=6239 GN=hif-1 PE=1 SV=1
Length=719
Score = 184 bits (467), Expect = 1e-48, Method: Composition-based stats.
Identities = 71/378 (19%), Positives = 135/378 (36%), Gaps = 47/378 (12%)
Query 66 HQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCN-AMSRKLDKLTVLRMAVQHMKT 124
+ ++ RE + RR K + D+L VP LD++ +LR+A +
Sbjct 5 RKRNMERRRETSRHAARDRRSKESDIFDDLKMCVPIVEEGTVTHLDRIALLRVAATICRL 64
Query 125 LRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQ 184
+ A N E N ++ + I DGF+ +V D IL+V+ESV L +Q
Sbjct 65 RKTAGNVL-ENNLDNEITNEVWTEDTIAECLDGFVMIVDSD-SSILYVTESVAMYLGLTQ 122
Query 185 NDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGAR 244
DL G++L D+LHP D + +Q S + R D T
Sbjct 123 TDLTGRALRDFLHPSDYDEFDKQ---SKMLHKPRGEDTDT------------------TG 161
Query 245 RSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEP 304
+ RMK + ++ + K + +
Sbjct 162 INMVLRMK----------TVISPRGRCLNLKSALYKSVSFLVHSKVSTGGHVSFMQGIT- 210
Query 305 DNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYL 364
+ G+ ++ + + +RH D + FV + IL
Sbjct 211 ----------IPAGQGTTNANASAMTKYTESPMGAFTTRHTCDMRITFVSDKFNYILKSE 260
Query 365 PQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLR-SRWFSF 423
+ L+GTS YE H D+ +++ +++ + I T Y+ + + ++
Sbjct 261 LKTLMGTSFYELVHPADMMIVSKSMKELF-AKGHIRTPYYRLIAANDTLAWIQTEATTIT 319
Query 424 MNPWTKEVEYIVSTNTVV 441
++ +Y++ + V+
Sbjct 320 HTTKGQKGQYVICVHYVL 337
>sp|Q3U1U7|AHRR_MOUSE Aryl hydrocarbon receptor repressor OS=Mus
musculus OX=10090 GN=Ahrr PE=1 SV=1
Length=701
Score = 174 bits (440), Expect = 4e-45, Method: Composition-based stats.
Identities = 78/329 (24%), Positives = 129/329 (39%), Gaps = 48/329 (15%)
Query 59 GRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMA 118
GR Q R S KR RD++N+ +D LASL+P + KLDKL+VLR++
Sbjct 12 GRKRRKPIQKRRLTMGAEKSNPSKRHRDRLNTELDHLASLLPFSPDIISKLDKLSVLRLS 71
Query 119 VQHMKTLRGATNPYTEANYKPTFLSDDE---------LKHLILRAADGFLFVVGCDRGKI 169
V +++ + LS +E L+L + +GF VV + G I
Sbjct 72 VSYLRVKSFFQALQETCVWSAPALSPEEHSYRGFPVQEGRLLLESLNGFALVVSAE-GMI 130
Query 170 LFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTG---- 225
+ S ++ L + Q D++ Q+++DY+H D QL + P+ +
Sbjct 131 FYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVFGQSPHADTDN 190
Query 226 ------LPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSF 279
L + PS + R F CR++C F
Sbjct 191 TVLGKLLRAQEGGKGLPSEYSAFLTRCFICRVRCLL------------------DSTSGF 232
Query 280 CTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSME 339
T+ G LK L + G L +++ + + V+P E+++KS
Sbjct 233 LTMQFQGKLK-------FLFGQKKKTPSGTALPPRLSLFCIVAPVLP--SVTEMKMKSTF 283
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQEL 368
++H D V +D RA A+ + EL
Sbjct 284 LKAKHRAD-IVVTMDSRAKAVTSLCESEL 311
>sp|Q75NT5|AHRR_RAT Aryl hydrocarbon receptor repressor OS=Rattus
norvegicus OX=10116 GN=Ahrr PE=2 SV=1
Length=701
Score = 172 bits (434), Expect = 3e-44, Method: Composition-based stats.
Identities = 77/329 (23%), Positives = 129/329 (39%), Gaps = 48/329 (15%)
Query 59 GRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMA 118
GR Q R S KR RD++N+ +D LASL+P + KLDKL+VLR++
Sbjct 12 GRKRRKPIQKRRLTMGTEKSNPSKRHRDRLNTELDHLASLLPFSPDIISKLDKLSVLRLS 71
Query 119 VQHMKTLRGATNPYTEANYKPTFLSDD---------ELKHLILRAADGFLFVVGCDRGKI 169
V +++ + LS + + L+L + +GF VV + G I
Sbjct 72 VSYLRVKSFFQALQETCVWSAPALSPEDHSSRGFPVQEGRLLLESLNGFALVVSAE-GMI 130
Query 170 LFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTG---- 225
+ S ++ L + Q D++ Q+++DY+H D QL + P+ +
Sbjct 131 FYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVFGQSPHADTDN 190
Query 226 ------LPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSF 279
L + PS + R F CR++C F
Sbjct 191 TVLGKLLRAQEGGKGLPSEYSAFLTRCFICRVRCLL------------------DSTSGF 232
Query 280 CTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSME 339
T+ G LK L + G L +++ + + V+P E+++KS
Sbjct 233 LTMQFQGKLK-------FLFGQKKKTPSGTALPPRLSLFCIVAPVLP--SVTEMKMKSAF 283
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQEL 368
++H D V +D RA A+ + EL
Sbjct 284 LKAKHRAD-IVVTMDSRAKAVTSLCESEL 311
>sp|Q8CJH6|NPAS4_RAT Neuronal PAS domain-containing protein 4
OS=Rattus norvegicus OX=10116 GN=Npas4 PE=1 SV=1
Length=802
Score = 167 bits (423), Expect = 2e-42, Method: Composition-based stats.
Identities = 94/485 (19%), Positives = 160/485 (33%), Gaps = 75/485 (15%)
Query 76 AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA 135
+ K RRD++N+ I L L+P A +L L ++ +A + + +G
Sbjct 4 STKGASKARRDQINAEIRNLKELLPLAEADKVRLSYLHIMSLACIYTR--KGVFFAGGTP 61
Query 136 NYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI--GQSLF 193
PT L + I+ A GFL V + GK+L++SESV + L +S DL+ G S++
Sbjct 62 LAGPTGLLSAQELEDIVAALPGFLLVFTAE-GKLLYLSESVSEHLGHSMVDLVAQGDSIY 120
Query 194 DYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKC 253
D + P D V++QL+ +RL F CR
Sbjct 121 DIIDPADHLTVRQQLTMPSALDADRL---------------------------FRCRF-- 151
Query 254 NRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSC 313
+T + + G + PP N C
Sbjct 152 -------------NTSKSLRRQSAGNKLVLIRGRFHAHPPGAYW------AGNPVFTAFC 192
Query 314 LVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSC 373
R P P G + + SRHA D + + + L + ELL S
Sbjct 193 APLEPRPRPGPGPGPGPGPASLFLAMFQSRHAKDLALLDISESVLIYLGFERSELLCKSW 252
Query 374 YEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGSFITLRSRWFSFMNPWTKEVE 432
Y H +D+ H + H ++L I + + K G + + + ++ E
Sbjct 253 YGLLHPEDLAHASSQHYRLLAENGDIQAEMVVRLQAKHGGWTWI------YCMLYSDGPE 306
Query 433 Y-IVSTNTVVLANVL----EGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGG 487
I + N + + + Q + + E + H + P
Sbjct 307 GPITANNYPISDTEAWSLRQQLNSENTQAAYVLGTPAVLPSFSENVFSQEHCSNP----- 361
Query 488 TRAGAGKIGRMIAEEI---MEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGG 544
+G + E+ I S + S L+ + P P P + L+
Sbjct 362 --LFTPALGTPRSASFPRAPELGVISTSEELAQPSKELDFSYLPFPARPEPSLQADLSKD 419
Query 545 TPDIP 549
P
Sbjct 420 LVCTP 424
>sp|Q8IUM7|NPAS4_HUMAN Neuronal PAS domain-containing protein
4 OS=Homo sapiens OX=9606 GN=NPAS4 PE=1 SV=1
Length=802
Score = 166 bits (420), Expect = 4e-42, Method: Composition-based stats.
Identities = 112/592 (19%), Positives = 193/592 (33%), Gaps = 118/592 (20%)
Query 76 AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA 135
+ K RRD++N+ I L L+P A +L L ++ +A + + +G
Sbjct 4 STKGASKARRDQINAEIRNLKELLPLAEADKVRLSYLHIMSLACIYTR--KGVFFAGGTP 61
Query 136 NYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI--GQSLF 193
PT L + I+ A GFL V + GK+L++SESV + L +S DL+ G S++
Sbjct 62 LAGPTGLLSAQELEDIVAALPGFLLVFTAE-GKLLYLSESVSEHLGHSMVDLVAQGDSIY 120
Query 194 DYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKC 253
D + P D V++QL+ +RL F CR
Sbjct 121 DIIDPADHLTVRQQLTLPSALDTDRL---------------------------FRCRF-- 151
Query 254 NRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSC 313
+T + + G + PP +
Sbjct 152 -------------NTSKSLRRQSAGNKLVLIRGRFHAHPPGAYWAGNP--------VFTA 190
Query 314 LVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSC 373
A P P G + + SRHA D + + + L + ELL S
Sbjct 191 FCAPLEPRPRPGPGPGPGPASLFLAMFQSRHAKDLALLDISESVLIYLGFERSELLCKSW 250
Query 374 YEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGSFITL---------------- 416
Y H +D+ H + H ++L I + + K G + +
Sbjct 251 YGLLHPEDLAHASAQHYRLLAESGDIQAEMVVRLQAKTGGWAWIYCLLYSEGPEGPITAN 310
Query 417 -----RSRWFSFMNPWTKE---VEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLP 468
+S E Y++ T T++ P+FP+ S S P
Sbjct 311 NYPISDMEAWSLRQQLNSEDTQAAYVLGTPTML---------PSFPENILSQEECSSTNP 361
Query 469 ---SGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRI---RGSSPSSCGSSPL 522
+ G P+ T + P P + A + + ++ + G PS
Sbjct 362 LFTAALGAPRST--SFPSAPELSVVSASE-ELPRPSKELDFSYLTFPSGPEPSLQAELSK 418
Query 523 NITSTPPPDASSPGG-------KKILNGGTPD---------IPSSGLLSGQAQENPG-YP 565
++ TPP PGG + P PS+ S Q + +P
Sbjct 419 DLVCTPPYTPHQPGGCAFLFSLHEPFQTHLPTPSSTLQEQLTPSTATFSDQLTPSSATFP 478
Query 566 YSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAMAVIMSLLEADAGLGGPV 617
+S + G+ + ++ + + + + + E LG P
Sbjct 479 DPLTSPLQGQLTETSVRSYEDQLTPCTSTFPDQLLPSTATFPEP---LGSPA 527
>sp|Q8BGD7|NPAS4_MOUSE Neuronal PAS domain-containing protein
4 OS=Mus musculus OX=10090 GN=Npas4 PE=1 SV=1
Length=802
Score = 165 bits (416), Expect = 1e-41, Method: Composition-based stats.
Identities = 101/548 (18%), Positives = 169/548 (31%), Gaps = 105/548 (19%)
Query 76 AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA 135
+ K RRD++N+ I L L+P A +L L ++ +A + + +G
Sbjct 4 STKGASKARRDQINAEIRNLKELLPLAEADKVRLSYLHIMSLACIYTR--KGVFFAGGTP 61
Query 136 NYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI--GQSLF 193
PT L + I+ A GFL V + GK+L++SESV + L +S DL+ G S++
Sbjct 62 LAGPTGLLSAQELEDIVAALPGFLLVFTAE-GKLLYLSESVSEHLGHSMVDLVAQGDSIY 120
Query 194 DYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKC 253
D + P D V++QL+ +RL F CR
Sbjct 121 DIIDPADHLTVRQQLTMPSALDADRL---------------------------FRCRF-- 151
Query 254 NRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSC 313
+T + + G + PP N C
Sbjct 152 -------------NTSKSLRRQSSGNKLVLIRGRFHAHPPGAYW------AGNPVFTAFC 192
Query 314 LVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSC 373
R P P G + + SRHA D + V + L + ELL S
Sbjct 193 APLEPRPRPGPGPGPGPGPASLFLAMFQSRHAKDLALLDVSESVLIYLGFERSELLCKSW 252
Query 374 YEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGSFITL---------------- 416
Y H +D+ + H ++L I + + K G + +
Sbjct 253 YGLLHPEDLAQASSQHYRLLAESGDIQAEMVVRLQAKHGGWTWIYCMLYSEGPEGPFTAN 312
Query 417 -----RSRWFSFMNPWTKE---VEYIVSTNTV---VLANVLEGGDPTFPQLTAS--PHSM 463
+ +S E Y++ T V NV + P T S
Sbjct 313 NYPISDTEAWSLRQQLNSEDTQAAYVLGTPAVLPSFSENVFSQEQCSNPLFTPSLGTPRS 372
Query 464 DSMLPSGEGGPKRTHPTVPGIPGG--------TRAGAGKIGRMIAEEIMEIHRIRGSSPS 515
S + E G T +P + ++++++ P
Sbjct 373 ASFPRAPELGVISTPEELPQPSKELDFSYLPFPARPEPSLQADLSKDLVCTPPYTPHQPG 432
Query 516 SCG--------------SSPLNITSTPPPDASSPGGKKILNGGTPDIPSSGLLSGQAQEN 561
C ++ P + + + T P + L GQ E+
Sbjct 433 GCAFLFSLHEPFQTHLPPPSSSLQEQLTPSTVTFSEQLTPSSATFPDPLTSSLQGQLTES 492
Query 562 PGYPYSDS 569
+ D
Sbjct 493 SARSFEDQ 500
>sp|A9YTQ3|AHRR_HUMAN Aryl hydrocarbon receptor repressor OS=Homo
sapiens OX=9606 GN=AHRR PE=1 SV=3
Length=701
Score = 160 bits (403), Expect = 4e-40, Method: Composition-based stats.
Identities = 68/298 (23%), Positives = 113/298 (38%), Gaps = 49/298 (16%)
Query 59 GRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMA 118
GR Q + S KR RD++N+ +D LASL+P + KLDKL+VLR++
Sbjct 15 GRKRRRPLQKQRPAVGAEKSNPSKRHRDRLNAELDHLASLLPFPPDIISKLDKLSVLRLS 74
Query 119 VQHMK------------TLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDR 166
V +++ + + A + + P S L+L + +GF VV +
Sbjct 75 VSYLRVKSFFQVVQEQSSRQPAAGAPSPGDSCPLAGSAVLEGRLLLESLNGFALVVSAE- 133
Query 167 GKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSS---------DTAPRE 217
G I + S ++ L + Q D++ Q+++DY+H D QL + P E
Sbjct 134 GTIFYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVFGQPPPLE 193
Query 218 RLIDAKTG--LPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKAD 275
DA G L + T P+ + R F CR++C
Sbjct 194 TGDDAILGRLLRAQEWGTGTPTEYSAFLTRCFICRVRCLL------------------DS 235
Query 276 RKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEI 333
F T+ G LK L + G L +++ + + V+
Sbjct 236 TSGFLTMQFQGKLK-------FLFGQKKKAPSGAMLPPRLSLFCIAAPVLLPSAAEMK 286
Score = 34.9 bits (78), Expect = 3.0, Method: Composition-based stats.
Identities = 8/54 (15%), Positives = 20/54 (37%), Gaps = 1/54 (2%)
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDD-IGHLAECHRQV 392
+ + +G + L + +++ + Y+Y H DD + H +
Sbjct 126 FALVVSAEGTIFYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAM 179
>sp|P90953|HLH34_CAEEL Helix-loop-helix 34 OS=Caenorhabditis elegans
OX=6239 GN=hlh-34 PE=2 SV=3
Length=322
Score = 152 bits (383), Expect = 5e-40, Method: Composition-based stats.
Identities = 68/376 (18%), Positives = 131/376 (35%), Gaps = 72/376 (19%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSR-KLDKLTVLRMAVQHMK 123
+ ++ ++RR N +LA+ +P A+S +DK T++R+A ++K
Sbjct 1 METNLSEEKQKPSKSQAQQRRQMENYEFSQLANELPLARAISGQHIDKTTMVRLATAYIK 60
Query 124 TLR---GATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
+ Y+ A+Y + SD + L DGF FV+ RG +L++SE++ L
Sbjct 61 LHNIFGQSQRAYSSADYY--YGSDSLWTNNHLDLLDGF-FVILDRRGDVLYISETISIYL 117
Query 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
SQ ++ G ++ DY+H +DI L+ D +
Sbjct 118 GLSQVEMTGNAMVDYIHEQDINCFNSALNYCDLNWPQM---------------------- 155
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
C ++ K +KD + + + T+M
Sbjct 156 --------CNVRVKSSLTKRANKDAVR-------ASPGYKVLRLEITMGPNTNTRM---- 196
Query 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI 360
+ + +P PV + + S +V +ID F D++A +
Sbjct 197 -------------------IACYPMPTPVLSTVTIPSNSFVIITSIDLHITFADEKAHQL 237
Query 361 LA---YLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLR 417
L Y + G S Y D +++ H + T Y+ + + + T
Sbjct 238 LNNPFYPDSNIKGMSLYSLIDISDSEVISKMHFDIFNL-GAYKTPYYRMIL-NQTSETFY 295
Query 418 SRWFSFMNPWTKEVEY 433
F + ++
Sbjct 296 VESNIFRHTSISSKQF 311
>sp|P0DOC7|NPS4L_DANRE Neuronal PAS domain-containing protein
4-like OS=Danio rerio OX=7955 GN=npas4l PE=2 SV=1
Length=647
Score = 158 bits (399), Expect = 8e-40, Method: Composition-based stats.
Identities = 76/402 (19%), Positives = 134/402 (33%), Gaps = 106/402 (26%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT---L 125
R + K RRD+MNS I L +L+P + +L L + + +++ L
Sbjct 13 RASKRFRSTKGASKARRDQMNSEIRNLRALLPI--SPEHRLSYLHSMSITCTYIRKSVEL 70
Query 126 RGATNPY---------------------TEANYKPTFLSDDELKHLILRAADGFLFVVGC 164
RG E + L + L+ +L+A GF+
Sbjct 71 RGVCEESTVFSAVNGCVPQDCALQDCALQECVLQECVLQECVLQECVLQALPGFIVAFTT 130
Query 165 DRGKILFVSESVFKILNYSQNDLI-GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAK 223
D GK+L+VSE+V + L S D++ S FD L D+ V+ L+ + +
Sbjct 131 D-GKLLYVSENVHEYLGLSMVDVLQSDSFFDMLDRSDVEAVRSVLADASPSG-------- 181
Query 224 TGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIH 283
R CRM ++ R S C +
Sbjct 182 --------------------ERWVVCRMLVSKAMRL----------------RSSCCPLL 205
Query 284 STGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSR 343
L+ + C C +P + ++ ++ +
Sbjct 206 VRIRLR----------------DGVCVSLC-------------RPTADRLPARNADFHTH 236
Query 344 HAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC 403
H+ D + L + EL+G S YE H DD+ H A+ H +L
Sbjct 237 HSADMRLASASSSVLFHLGFSADELIGRSWYELLHPDDLRHAADRHAAILAAATADAEML 296
Query 404 YKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANV 445
+ + KD S++ + + + T E + I +N ++
Sbjct 297 IRVQCKDLSWVWMYTHASA-----TAERDAISCSNYMISEAE 333
>sp|E7FFX1|NPS4B_DANRE Neuronal PAS domain-containing protein
4B OS=Danio rerio OX=7955 GN=npas4b PE=3 SV=1
Length=844
Score = 157 bits (397), Expect = 4e-39, Method: Composition-based stats.
Identities = 68/345 (20%), Positives = 119/345 (34%), Gaps = 49/345 (14%)
Query 76 AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA 135
+ K RRD++N+ I L L+P +A +L L ++ +A + + +
Sbjct 65 STKGASKARRDQINAEIRSLKELLPISDADKARLSYLHIMSLACIYTRKSVFFSQAAAGH 124
Query 136 NYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQS--LF 193
+ LS EL L L GFL V+ + GK+L++S++V + L +S DL+ QS ++
Sbjct 125 GMSGSLLSLPELSDL-LHTLPGFLLVLTSE-GKLLYLSDNVAEHLGHSMVDLVAQSDSVY 182
Query 194 DYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKC 253
D + P D ++ L T +RL + ++ R +C
Sbjct 183 DIIDPVDHFIMRGNLVPITTPDTDRLFRCRFSTSKFVRRQGSGNKQA-------IVRARC 235
Query 254 NRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE-DNEPDNEGCNLS 312
P + + S P + P + LS
Sbjct 236 LPPPYHASPYWTSNPV----------WVCFCSPLEASMPQLSTSRNPLPTPPAEQSFLLS 285
Query 313 CLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTS 372
C + S+H+ D + V + L Y + L S
Sbjct 286 C--------------------------FQSQHSRDMRIHTVQDSVSVYLGYDIETLRSRS 319
Query 373 CYEYFHQDDIGHLAECHRQVLQTREK-ITTNCYKFKIKDGSFITL 416
Y H D+ H + H +L + + + D S+I L
Sbjct 320 WYSLIHPRDLSHASAQHCTLLHNGGERQVEMVVQVEAADHSWIWL 364
>sp|Q1ECW2|NPS4A_DANRE Neuronal PAS domain-containing protein
4A OS=Danio rerio OX=7955 GN=npas4a PE=2 SV=1
Length=933
Score = 155 bits (391), Expect = 3e-38, Method: Composition-based stats.
Identities = 92/477 (19%), Positives = 166/477 (35%), Gaps = 68/477 (14%)
Query 76 AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMK-TLRGATNPYTE 134
+ K RRD++N+ I L L+P +A +L L ++ +A + + ++ + + T
Sbjct 4 STKGASKARRDQINAEIRNLKDLLPISDADKSRLSYLHIMSLACMYTRKSVFFSQDITTA 63
Query 135 ANYKPT--FLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI--GQ 190
++ + T FLS EL LI + GFL ++ + GK+L++S+SV L +S DL+ G
Sbjct 64 SSAEETTGFLSFYELNELI-QGMPGFLLLLTGE-GKLLYLSDSVSDHLGHSMVDLVAQGD 121
Query 191 SLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCR 250
S++D + D ++ L + +RL + T R S + R
Sbjct 122 SVYDIIDTADHFIMRSNLVPPTSPDTDRLFRCR-------FNTSKSVRRQSAGNKLVLIR 174
Query 251 MKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCN 310
+C + T + FC P D E +
Sbjct 175 ARCLSQTPSESSPGSYWTSNPV---WVCFCA----------PLEPHTSRGGTASDRESTS 221
Query 311 LSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLG 370
S L + L + S+H+ D + + + L + L
Sbjct 222 ASALESSFFLPC-----------------FRSQHSRDMRLHEAQESVSVYLGLNVEILRS 264
Query 371 TSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGSFITLRSRWFSFMNPWTK 429
S Y + H D+ H + H +L+ + + + D S++ L + +
Sbjct 265 QSWYSFLHPQDLSHASAQHCSLLREGGEGRAEMVVRVETADHSWVWL---YMVLQLETGE 321
Query 430 EVEYIVSTNTVV-----------LANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTH 478
IVS N ++ L++ T+ S+ P P +
Sbjct 322 TP--IVSNNYIISETEAWSVRQQLSSEQTQLSLVLGSSTSQQESVSLQSPETLSSPDQ-- 377
Query 479 PTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSS---PSSCGSSPLNITSTPPPDA 532
PG G +G A GSS P+ S P + S+ +
Sbjct 378 VFTPGSSG--LSGQSFDFSTAACSTGSTEEQGGSSSMEPAQVESGPRSSLSSMEEET 432
>sp|Q65ZG8|PER_CAEEL Period protein homolog lin-42 OS=Caenorhabditis
elegans OX=6239 GN=lin-42 PE=1 SV=1
Length=597
Score = 118 bits (295), Expect = 1e-26, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 72/170 (42%), Gaps = 2/170 (1%)
Query 315 VAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCY 374
+ + L S Q + ++++H+ +D + L LP +L+G S
Sbjct 144 ITVLALRSAFSLQASHVSSNFHVFTFITKHSSTCALTHIDYASIPYLGLLPTDLIGKSLL 203
Query 375 EYFHQDDIGHLAECHRQVLQTREKITTNCY--KFKIKDGSFITLRSRWFSFMNPWTKEVE 432
+ + D+ + + H + +R KI + + +GS + ++ W +++NPWT+++E
Sbjct 204 AFVYSPDVHVVRQAHIDLHNSRGKIVKSIADLRLVAHNGSILRCQTEWSAYVNPWTRKME 263
Query 433 YIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVP 482
+V+ + + + + + P +++ ++ RT P
Sbjct 264 LVVARHRICSLPIGDSDVISSPPPGIQSNTLPPVMAKTFEDELRTIMNKP 313
>sp|Q6AT90|APG_ORYSJ Transcription factor APG OS=Oryza sativa
subsp. japonica OX=39947 GN=APG PE=1 SV=1
Length=505
Score = 90.3 bits (222), Expect = 9e-18, Method: Composition-based stats.
Identities = 25/97 (26%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query 34 DCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFID 93
D + + + Q+ +D D + + E H+ E+RRRD++N +
Sbjct 297 DSHNNQSAEWSASQDELDLDDELAGVHRRSAARSSKRSRTAEVHNLSERRRRDRINEKMR 356
Query 94 ELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
L L+P CN K+DK ++L A++++KTL+
Sbjct 357 ALQELIPNCN----KIDKASMLEEAIEYLKTLQLQVQ 389
>sp|Q63665|USF2_RAT Upstream stimulatory factor 2 OS=Rattus norvegicus
OX=10116 GN=Usf2 PE=1 SV=2
Length=346
Score = 86.1 bits (211), Expect = 7e-17, Method: Composition-based stats.
Identities = 25/101 (25%), Positives = 49/101 (49%), Gaps = 4/101 (4%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK--LDKLTV 114
P+ R + R H+++E+RRRDK+N++I +L+ ++P C+A + K K +
Sbjct 220 PYSPKIDGTRTPRDERRRAQHNEVERRRRDKINNWIVQLSKIIPDCHADNSKTGASKGGI 279
Query 115 LRMAVQHMKTLRGATNPYTE--ANYKPTFLSDDELKHLILR 153
L A +++ LR E + + ++ L+ I
Sbjct 280 LSKACDYIRELRQTNQRMQETFKEAERLQMDNELLRQQIEE 320
>sp|Q64705|USF2_MOUSE Upstream stimulatory factor 2 OS=Mus musculus
OX=10090 GN=Usf2 PE=1 SV=1
Length=346
Score = 86.1 bits (211), Expect = 7e-17, Method: Composition-based stats.
Identities = 25/101 (25%), Positives = 49/101 (49%), Gaps = 4/101 (4%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK--LDKLTV 114
P+ R + R H+++E+RRRDK+N++I +L+ ++P C+A + K K +
Sbjct 220 PYSPKIDGTRTPRDERRRAQHNEVERRRRDKINNWIVQLSKIIPDCHADNSKTGASKGGI 279
Query 115 LRMAVQHMKTLRGATNPYTE--ANYKPTFLSDDELKHLILR 153
L A +++ LR E + + ++ L+ I
Sbjct 280 LSKACDYIRELRQTNQRMQETFKEAERLQMDNELLRQQIEE 320
>sp|Q15853|USF2_HUMAN Upstream stimulatory factor 2 OS=Homo sapiens
OX=9606 GN=USF2 PE=1 SV=1
Length=346
Score = 85.3 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 26/101 (26%), Positives = 49/101 (49%), Gaps = 4/101 (4%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK--LDKLTV 114
P+ R + R H+++E+RRRDK+N++I +L+ ++P CNA + K K +
Sbjct 220 PYSPKIDGTRTPRDERRRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNSKTGASKGGI 279
Query 115 LRMAVQHMKTLRGATNPYTE--ANYKPTFLSDDELKHLILR 153
L A +++ LR E + + ++ L+ I
Sbjct 280 LSKACDYIRELRQTNQRMQETFKEAERLQMDNELLRQQIEE 320
>sp|Q9I9L0|HEY2_DANRE Hairy/enhancer-of-split related with YRPW
motif protein 2 OS=Danio rerio OX=7955 GN=hey2 PE=2 SV=2
Length=324
Score = 81.5 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/98 (30%), Positives = 48/98 (49%), Gaps = 10/98 (10%)
Query 42 SSTDYQESMDTDKDDPHG--------RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFID 93
S +D E++D ++ + R ++ ++ IEKRRRD++N+ +
Sbjct 10 SDSDMDETIDVGSENNYSGQSNGSFIRCGSPTTTSQVMARKKRRGIIEKRRRDRINNSLS 69
Query 94 ELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGAT 129
EL LVPT S KL+K +L+M V H+K L+
Sbjct 70 ELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQATG 107
>sp|Q9UBP5|HEY2_HUMAN Hairy/enhancer-of-split related with YRPW
motif protein 2 OS=Homo sapiens OX=9606 GN=HEY2 PE=1 SV=1
Length=337
Score = 81.5 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/98 (32%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query 42 SSTDYQESMDTDKDDPHG--------RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFID 93
S +D E++D ++ + RL +I ++ IEKRRRD++N+ +
Sbjct 10 SESDMDETIDVGSENNYSGQSTSSVIRLNSPTTTSQIMARKKRRGIIEKRRRDRINNSLS 69
Query 94 ELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGAT 129
EL LVPT S KL+K +L+M V H+K L+
Sbjct 70 ELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQATG 107
>sp|O02818|USF1_RABIT Upstream stimulatory factor 1 OS=Oryctolagus
cuniculus OX=9986 GN=USF1 PE=2 SV=1
Length=310
Score = 81.1 bits (198), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/97 (27%), Positives = 49/97 (51%), Gaps = 4/97 (4%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKL--DKLTV 114
P+ R + R H+++E+RRRDK+N++I +L+ ++P C+ S K K +
Sbjct 184 PYSPKSAAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGI 243
Query 115 LRMAVQHMKTLRGATNPYTE--ANYKPTFLSDDELKH 149
L A +++ LR + + +E L +D L+
Sbjct 244 LSKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQ 280
>sp|Q9EPU2|NCOA3_RAT Nuclear receptor coactivator 3 (Fragment)
OS=Rattus norvegicus OX=10116 GN=Ncoa3 PE=2 SV=1
Length=1082
Score = 83.4 bits (204), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 63/210 (30%), Gaps = 15/210 (7%)
Query 369 LGTSCYEYFHQDDIG--HLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNP 426
+ C + F + G + H Q T Y+F + DG+ ++ +++ F NP
Sbjct 1 IIRRCIQRFFSLNDGQSWSQKRHYQEAYIHGHAETPVYRFSLADGTIVSAQTKSKLFRNP 60
Query 427 WTKEVEYIVSTNTVVLANVLEGGDPT--------FPQLTASPHSMDSMLPSGEGGPKRTH 478
T + VST+ L G P P S+ G +
Sbjct 61 VTNDRHGFVSTH--FLQREQNGCRPNPILQDKGIRPPAAGCGMSLSPSQSVQMLGSRTYG 118
Query 479 PTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGK 538
P G AGA + ++ SPSS S+ + + PP S G
Sbjct 119 VADP-SNTGQMAGARYGASSSVASLTPGQSLQ--SPSSYQSNSYGLNMSSPPHGSPGLGP 175
Query 539 KILNGGTPDIPSSGLLSGQAQENPGYPYSD 568
N Q +P
Sbjct 176 NQQNIMISPRNRGSPKMASHQFSPAAGVHS 205
>sp|P22415|USF1_HUMAN Upstream stimulatory factor 1 OS=Homo sapiens
OX=9606 GN=USF1 PE=1 SV=1
Length=310
Score = 80.7 bits (197), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/97 (27%), Positives = 49/97 (51%), Gaps = 4/97 (4%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKL--DKLTV 114
P+ R + R H+++E+RRRDK+N++I +L+ ++P C+ S K K +
Sbjct 184 PYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGI 243
Query 115 LRMAVQHMKTLRGATNPYTE--ANYKPTFLSDDELKH 149
L A +++ LR + + +E L +D L+
Sbjct 244 LSKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQ 280
>sp|Q6XBT4|USF1_BOVIN Upstream stimulatory factor 1 OS=Bos taurus
OX=9913 GN=USF1 PE=2 SV=1
Length=310
Score = 80.3 bits (196), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/97 (27%), Positives = 49/97 (51%), Gaps = 4/97 (4%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKL--DKLTV 114
P+ R + R H+++E+RRRDK+N++I +L+ ++P C+ S K K +
Sbjct 184 PYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGI 243
Query 115 LRMAVQHMKTLRGATNPYTE--ANYKPTFLSDDELKH 149
L A +++ LR + + +E L +D L+
Sbjct 244 LSKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQ 280
>sp|Q61069|USF1_MOUSE Upstream stimulatory factor 1 OS=Mus musculus
OX=10090 GN=Usf1 PE=1 SV=1
Length=310
Score = 80.3 bits (196), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/97 (27%), Positives = 49/97 (51%), Gaps = 4/97 (4%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKL--DKLTV 114
P+ R + R H+++E+RRRDK+N++I +L+ ++P C+ S K K +
Sbjct 184 PYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGI 243
Query 115 LRMAVQHMKTLRGATNPYTE--ANYKPTFLSDDELKH 149
L A +++ LR + + +E L +D L+
Sbjct 244 LSKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQ 280
>sp|Q07957|USF1_XENBO Upstream stimulatory factor 1 OS=Xenopus
borealis OX=8354 GN=usf1 PE=2 SV=1
Length=307
Score = 78.4 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/97 (26%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK--LDKLTV 114
P+ R R H+++E+RRRDK+N++I +L+ ++P C+ S K K +
Sbjct 181 PYSPKSDGPRTTRDDKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKTGQSKGGI 240
Query 115 LRMAVQHMKTLRGATNPYTE--ANYKPTFLSDDELKH 149
L A +++ LR + +E N + ++ L+
Sbjct 241 LSKACDYIQELRQSNLRLSEELQNLDQLQMDNEVLRQ 277
>sp|Q0JNI9|PIL15_ORYSJ Transcription factor PHYTOCHROME INTERACTING
FACTOR-LIKE 15 OS=Oryza sativa subsp. japonica OX=39947
GN=PIL15 PE=1 SV=2
Length=637
Score = 79.9 bits (195), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 5/106 (5%)
Query 26 SSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRL-EYTEHQGRIKNAREAHSQIEKRR 84
+ +++ + + S D D DD G L + + E H+ E+RR
Sbjct 337 GAGSDELWRQQKRKCQAQAECSASQDDDLDDEPGVLRKSGTRSTKRSRTAEVHNLSERRR 396
Query 85 RDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
RD++N + L L+P CN K+DK ++L A++++KTL+
Sbjct 397 RDRINEKMRALQELIPNCN----KIDKASMLDEAIEYLKTLQLQVQ 438
>sp|Q9QUS4|HEY2_MOUSE Hairy/enhancer-of-split related with YRPW
motif protein 2 OS=Mus musculus OX=10090 GN=Hey2 PE=1 SV=1
Length=339
Score = 78.0 bits (190), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/98 (31%), Positives = 48/98 (49%), Gaps = 10/98 (10%)
Query 42 SSTDYQESMDTDKDDPH--------GRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFID 93
S +D E++D ++ + R +I ++ IEKRRRD++N+ +
Sbjct 10 SESDLDETIDVGSENNYPGHATSSVMRSNSPTTTSQIMARKKRRGIIEKRRRDRINNSLS 69
Query 94 ELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGAT 129
EL LVPT S KL+K +L+M V H+K L+
Sbjct 70 ELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQATG 107
>sp|Q2NL18|HEYL_BOVIN Hairy/enhancer-of-split related with YRPW
motif-like protein OS=Bos taurus OX=9913 GN=HEYL PE=2 SV=3
Length=328
Score = 77.3 bits (188), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query 36 NRKRKGSSTDYQESMDTDKD---DPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFI 92
R+ GS ++ +D ++ R T +++ ++ IEKRRRD++NS +
Sbjct 4 PREPSGSDSESDGPIDVGREGELSQMARPLSTPSPSQMQARKKRRGIIEKRRRDRINSSL 63
Query 93 DELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGAT 129
EL LVPT S KL+K VL+M V H+K L
Sbjct 64 SELRRLVPTAFEKQGSSKLEKAEVLQMTVDHLKMLHATG 102
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis
thaliana OX=3702 GN=PIF1 PE=1 SV=1
Length=478
Score = 78.8 bits (192), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query 31 SGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNS 90
+ VD ++++ +T E+ ++ R+ T + A E H+ E++RRD++N
Sbjct 245 TNVDDRKRKEREATTTDETESRSEETKQARVSTTS--TKRSRAAEVHNLSERKRRDRINE 302
Query 91 FIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
+ L L+P CN K DK ++L A+++MK+L+
Sbjct 303 RMKALQELIPRCN----KSDKASMLDEAIEYMKSLQ 334
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis
thaliana OX=3702 GN=PIF3 PE=1 SV=1
Length=524
Score = 78.8 bits (192), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/139 (24%), Positives = 61/139 (44%), Gaps = 11/139 (8%)
Query 2 ADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRL 61
DQ + + S S D S S S + + + D +++ GR
Sbjct 272 KDQESEKAVVCSSVGSGNSLDGPSESPSLSLKRKHSNIQDIDCHSE---DVEEESGDGRK 328
Query 62 EYTEHQ----GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRM 117
E + + + E H+ E+RRRD++N + L L+P CN K+DK ++L
Sbjct 329 EAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCN----KVDKASMLDE 384
Query 118 AVQHMKTLRGATNPYTEAN 136
A++++K+L+ + A+
Sbjct 385 AIEYLKSLQLQVQIMSMAS 403
>sp|Q9DBX7|HEYL_MOUSE Hairy/enhancer-of-split related with YRPW
motif-like protein OS=Mus musculus OX=10090 GN=Heyl PE=1 SV=2
Length=326
Score = 76.9 bits (187), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query 36 NRKRKGSSTDYQESMDTDKDD---PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFI 92
R GS + +D +++ R T +++ ++ IEKRRRD++NS +
Sbjct 4 PRAPSGSDGESDGPIDVGQENDLSQMARPLTTPSPSQMQARKKRRGIIEKRRRDRINSSL 63
Query 93 DELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGAT 129
EL LVPT S KL+K VL+M V H+K L +
Sbjct 64 SELRRLVPTAFEKQGSSKLEKAEVLQMTVDHLKMLHASG 102
>sp|Q8AXV5|HEYL_DANRE Hairy/enhancer-of-split related with YRPW
motif-like protein OS=Danio rerio OX=7955 GN=heyl PE=2 SV=2
Length=310
Score = 76.5 bits (186), Expect = 6e-14, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query 36 NRKRKGSSTDYQESMDTDKDDPHGRL---EYTEHQGRIKNAREAHSQIEKRRRDKMNSFI 92
+D E +D ++D + + +I ++ IEKRRRD++N +
Sbjct 4 PHDYSSPDSDTDELIDVGQEDSYCPVTGSMSPGSTSQILARKKRRGIIEKRRRDRINHSL 63
Query 93 DELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGAT 129
EL LVP+ S KL+K +L+M V H+K L
Sbjct 64 SELRRLVPSAFEKQGSSKLEKAEILQMTVDHLKLLHAMG 102
>sp|Q5A1E3|CBF1_CANAL Transcriptional regulator CBF1 OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=CBF1
PE=1 SV=2
Length=251
Score = 74.9 bits (182), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/132 (27%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query 47 QESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMS 106
Q + T+ + +E R RE H ++E++RR+ +N+ I ELA L+PT +
Sbjct 129 QTNFKTEPTNSAKPPHGSEEWHR--QRRENHKEVERKRRESINTGIRELARLIPTTDT-- 184
Query 107 RKLDKLTVLRMAVQHMKTLRGATNP----------YTEANYKPTFLSDDELKHLILRAAD 156
+K +L+ AV+++K L+ N TE S+++LKH + A
Sbjct 185 ---NKAQILQRAVEYIKRLKENENNNIEKWTLEKLLTEQAVSELSASNEKLKHELESA-- 239
Query 157 GFLFVVGCDRGK 168
+ + RGK
Sbjct 240 -YREIEQLKRGK 250
>sp|Q9NQ87|HEYL_HUMAN Hairy/enhancer-of-split related with YRPW
motif-like protein OS=Homo sapiens OX=9606 GN=HEYL PE=1 SV=2
Length=328
Score = 75.3 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query 36 NRKRKGSSTDYQESMDTDKD---DPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFI 92
++ GS + +D ++ R T +++ ++ IEKRRRD++NS +
Sbjct 4 PKEPSGSDGESDGPIDVGQEGQLSQMARPLSTPSSSQMQARKKHRGIIEKRRRDRINSSL 63
Query 93 DELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGAT 129
EL LVPT S KL+K VL+M V H+K L
Sbjct 64 SELRRLVPTAFEKQGSSKLEKAEVLQMTVDHLKMLHATG 102
>sp|Q6QB00|HELT_DANRE Hairy and enhancer of split-related protein
helt OS=Danio rerio OX=7955 GN=helt PE=2 SV=1
Length=270
Score = 74.2 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/193 (21%), Positives = 70/193 (36%), Gaps = 14/193 (7%)
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVP--TCNAMSRKLDKLTVLRMA 118
K +H IEKRRRD++N ++EL VP S KL+K +L M
Sbjct 48 EMMASKMKDRKKTPVSHKVIEKRRRDRINRCLNELGKTVPMALAKQNSGKLEKAEILEMT 107
Query 119 VQHMKTLRGATNPYTEANYKPTFLSDDELK---HLILRAADGFL-FVVGCDRGKILFVSE 174
VQ+++ L A P + + H ++ +L V + +
Sbjct 108 VQYLRALHSADFPRGREKGELLTEFANYFHYGYHECMKNLVHYLTTVERMETKDTKY--- 164
Query 175 SVFKILNYSQNDLIGQSLFDYLHP--KDIAKVKEQLSSSDTAPRERLI-DAKTGLPVKTD 231
+IL + Q+ ++ + +F L D + QL +P E + + G
Sbjct 165 --ARILAFLQSKVVTEPVFGSLGTISPDPTDLLCQLEYQSPSPTESVFQQSPPGHFSWHS 222
Query 232 ITPGPSRLCSGAR 244
T P+
Sbjct 223 STRSPTLAYPAMS 235
>sp|Q10CH5|PIL13_ORYSJ Transcription factor PHYTOCHROME INTERACTING
FACTOR-LIKE 13 OS=Oryza sativa subsp. japonica OX=39947
GN=PIL13 PE=1 SV=1
Length=410
Score = 74.6 bits (181), Expect = 7e-13, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query 38 KRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAR--EAHSQIEKRRRDKMNSFIDEL 95
KRKG S D + + + G + R E H+ E+RRRD++N + L
Sbjct 184 KRKGREDSDSRSEDAECEATEETKSSSRRYGSKRRTRAAEVHNLSERRRRDRINEKMRAL 243
Query 96 ASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
L+P CN K DK ++L A++++K+L+
Sbjct 244 QELIPHCN----KTDKASILDEAIEYLKSLQMQVQ 274
>sp|Q9VGZ5|CWO_DROME Transcription factor cwo OS=Drosophila melanogaster
OX=7227 GN=cwo PE=1 SV=2
Length=698
Score = 74.9 bits (182), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/178 (22%), Positives = 73/178 (41%), Gaps = 47/178 (26%)
Query 68 GRIKNARE---AHSQIEKRRRDKMNSFIDELASLVPTCNAMS--RKLDKLTVLRMAVQHM 122
R K +R+ +H IEKRRRD+MNS + +L+ L+P +++K ++ MA++H+
Sbjct 55 RRNKTSRQDPLSHRIIEKRRRDRMNSCLADLSRLIPPQYQRKGRGRIEKTEIIEMAIRHL 114
Query 123 KTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDR------GKILFVSESV 176
K L+ E++Y+ ++ ++ A FL+ V G++ + +
Sbjct 115 KHLQSECQ-QKESDYRSGYMD-------CMKEAAKFLYDVHMQDFCHRLLGRLQEHIDEM 166
Query 177 FKILNYSQN----------------------------DLIGQSLFDYLHPKDIAKVKE 206
FK Y D++ S D H +D VK+
Sbjct 167 FKTDCYKSTRSCHMPDNVSASSGSPHQAYHPPLCHLRDMLATSASDVEHSQDHNDVKD 224
>sp|Q9WV93|HEY1_MOUSE Hairy/enhancer-of-split related with YRPW
motif protein 1 OS=Mus musculus OX=10090 GN=Hey1 PE=1 SV=1
Length=299
Score = 72.2 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Query 34 DCNRKRKGSSTDYQESMDTDKD--DPHGRL------EYTEHQGRIKNAREAHSQIEKRRR 85
+ S ++ E+++ +K+ D +G L ++ + IEKRRR
Sbjct 3 RAHPDYSSSDSELDETIEVEKESADENGNLSSALCSMSPTTSSQVLARKRRRGIIEKRRR 62
Query 86 DKMNSFIDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGAT 129
D++N+ + EL LVP+ S KL+K +L+M V H+K L A
Sbjct 63 DRINNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHTAG 108
>sp|Q8AXV6|HEY1_DANRE Hairy/enhancer-of-split related with YRPW
motif protein 1 OS=Danio rerio OX=7955 GN=hey1 PE=2 SV=1
Length=317
Score = 71.9 bits (174), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/104 (27%), Positives = 49/104 (47%), Gaps = 10/104 (10%)
Query 36 NRKRKGSSTDYQESMDTDKD--------DPHGRLEYTEHQGRIKNAREAHSQIEKRRRDK 87
N S ++ E+++ +K+ + +++ + IEKRRRD+
Sbjct 4 NHDFSSSDSELDENIEVEKESADENAGANSPLGSMSPSTTSQVQARKRRRGIIEKRRRDR 63
Query 88 MNSFIDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGAT 129
+N+ + EL LVP+ S KL+K +L+M V H+K L A
Sbjct 64 INNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHAAG 107
>sp|Q9TSZ2|HEY1_CANLF Hairy/enhancer-of-split related with YRPW
motif protein 1 OS=Canis lupus familiaris OX=9615 GN=HEY1
PE=2 SV=1
Length=304
Score = 71.5 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Query 34 DCNRKRKGSSTDYQESMDTDKD--DPHGRL------EYTEHQGRIKNAREAHSQIEKRRR 85
+ S ++ E+++ +K+ D +G L +I + IEKRRR
Sbjct 3 RAHPDYSSSDSELDETVEVEKESADENGNLSSALGSMSPTTSSQILARKRRRGIIEKRRR 62
Query 86 DKMNSFIDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGAT 129
D++N+ + EL LVP+ S KL+K +L+M V H+K L A
Sbjct 63 DRINNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHTAG 108
>sp|Q9Y5J3|HEY1_HUMAN Hairy/enhancer-of-split related with YRPW
motif protein 1 OS=Homo sapiens OX=9606 GN=HEY1 PE=1 SV=1
Length=304
Score = 71.5 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query 40 KGSSTDYQESMDTDKD--DPHGRL------EYTEHQGRIKNAREAHSQIEKRRRDKMNSF 91
S ++ E+++ +K+ D +G L +I + IEKRRRD++N+
Sbjct 9 SSSDSELDETIEVEKESADENGNLSSALGSMSPTTSSQILARKRRRGIIEKRRRDRINNS 68
Query 92 IDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGAT 129
+ EL LVP+ S KL+K +L+M V H+K L A
Sbjct 69 LSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHTAG 108
>sp|Q9I8A3|HEY1_XENLA Hairy/enhancer-of-split related with YRPW
motif protein 1 OS=Xenopus laevis OX=8355 GN=hey1 PE=1 SV=1
Length=294
Score = 70.7 bits (171), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query 36 NRKRKGSSTDYQESMDTD----KDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSF 91
S ++ E+++ + ++ + +I + IEKRRRD++N+
Sbjct 4 GHDYSSSDSELDENIEVEKESADENGNLSSMSPSTSSQILARKRRRGIIEKRRRDRINNS 63
Query 92 IDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGAT 129
+ EL LVP+ S KL+K +L+M V H+K L A
Sbjct 64 LSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHTAG 103
>sp|A6NFD8|HELT_HUMAN Hairy and enhancer of split-related protein
HELT OS=Homo sapiens OX=9606 GN=HELT PE=2 SV=2
Length=242
Score = 69.5 bits (168), Expect = 6e-12, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 38/78 (49%), Gaps = 2/78 (3%)
Query 63 YTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVP--TCNAMSRKLDKLTVLRMAVQ 120
++ K +H IEKRRRD++N ++EL VP S KL+K +L M VQ
Sbjct 1 MSDKLKERKRTPVSHKVIEKRRRDRINRCLNELGKTVPMALAKQSSGKLEKAEILEMTVQ 60
Query 121 HMKTLRGATNPYTEANYK 138
+++ L A P +
Sbjct 61 YLRALHSADFPRGREKAE 78
>sp|Q66KK8|HEY1_XENTR Hairy/enhancer-of-split related with YRPW
motif protein 1 OS=Xenopus tropicalis OX=8364 GN=hey1 PE=2
SV=1
Length=300
Score = 70.3 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 31/104 (30%), Positives = 50/104 (48%), Gaps = 10/104 (10%)
Query 36 NRKRKGSSTDYQESMDTDKD--DPHGRL------EYTEHQGRIKNAREAHSQIEKRRRDK 87
S ++ E+++ +K+ D +G L +I + IEKRRRD+
Sbjct 4 GHDYSSSDSELDENIEVEKESADENGNLSSAAGSMSPSTSSQILARKRRRGIIEKRRRDR 63
Query 88 MNSFIDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGAT 129
+N+ + EL LVP+ S KL+K +L+M V H+K L A
Sbjct 64 INNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHTAG 107
>sp|Q2KIN4|HEY1_BOVIN Hairy/enhancer-of-split related with YRPW
motif protein 1 OS=Bos taurus OX=9913 GN=HEY1 PE=2 SV=1
Length=304
Score = 70.3 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query 40 KGSSTDYQESMDTDKD--DPHGRL------EYTEHQGRIKNAREAHSQIEKRRRDKMNSF 91
S ++ E+++ +K+ D +G L +I + IEKRRRD++N+
Sbjct 9 SSSESELDETIEVEKESADENGNLSSALGSMSPTTSSQILARKRRRGIIEKRRRDRINNS 68
Query 92 IDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGAT 129
+ EL LVP+ S KL+K +L+M V H+K L A
Sbjct 69 LSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHTAG 108
>sp|Q07956|USF_STRPU Upstream stimulatory factor OS=Strongylocentrotus
purpuratus OX=7668 PE=2 SV=1
Length=265
Score = 69.5 bits (168), Expect = 9e-12, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 6/122 (5%)
Query 18 PGPTDLLSSSLGTSGVDC-NRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREA 76
PG T ++ G V + ++ + T + + R + R
Sbjct 138 PGITQPSGAAGGQFYVMMSPQDVLQGASQRTIAPRTHQFNTKI---DNSRTVRDERRRAT 194
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSRK--LDKLTVLRMAVQHMKTLRGATNPYTE 134
H+++E+RRRDK+N++I +L+ ++P CN K K +L ++ LR + +
Sbjct 195 HNEVERRRRDKINNWIVKLSKIIPDCNIDHSKQGQSKGGILTKTCDYIHDLRNSNTRMAK 254
Query 135 AN 136
A+
Sbjct 255 AS 256
>sp|Q7TS99|HELT_MOUSE Hairy and enhancer of split-related protein
HELT OS=Mus musculus OX=10090 GN=Helt PE=1 SV=1
Length=240
Score = 68.0 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (3%)
Query 63 YTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVP--TCNAMSRKLDKLTVLRMAVQ 120
++ K +H IEKRRRD++N ++EL VP S KL+K +L M VQ
Sbjct 1 MSDRLKERKRTPVSHKVIEKRRRDRINRCLNELGKTVPMALAKQSSGKLEKAEILEMTVQ 60
Query 121 HMKTLRGATNPYTEA 135
+++ L A P
Sbjct 61 YLRALHSADFPRGRE 75
>sp|O14503|BHE40_HUMAN Class E basic helix-loop-helix protein
40 OS=Homo sapiens OX=9606 GN=BHLHE40 PE=1 SV=1
Length=412
Score = 68.4 bits (165), Expect = 6e-11, Method: Composition-based stats.
Identities = 54/315 (17%), Positives = 100/315 (32%), Gaps = 41/315 (13%)
Query 59 GRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVP--TCNAMSRKLDKLTVLR 116
R + + + H IEK+RRD++N I +L L+P L+K VL
Sbjct 39 SRRGIKRSEDSKETYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLE 98
Query 117 MAVQHMKTLRGATNPYTEA--NYKPTFLSDDELKHLILRAADGFLFVV-GCDRGKILFVS 173
+ ++H+K L + + + + + + + F C R + +++
Sbjct 99 LTLKHVKALTNLIDQQQQKIIALQSGLQAGELSGRNVETGQEMFCSGFQTCAREVLQYLA 158
Query 174 ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT 233
+ + + DL L +LH ++ S + P +++D K +
Sbjct 159 K------HENTRDLKSSQLVTHLHRVVSELLQGGTSRKPSDPAPKVMDFKEKPSSPAKGS 212
Query 234 PGPSRLC-SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWP 292
GP + C +R+F S + D + K G L+S
Sbjct 213 EGPGKNCVPVIQRTF------AHSSGEQSGSDTDTDSGYGGESEK--------GDLRSEQ 258
Query 293 PTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVF 352
P E IG + P S +G F
Sbjct 259 PCFKSDHGRRFTMGER--------IGAIKQESEEPPTKKNRMQLS-------DDEGHFTS 303
Query 353 VDQRATAILAYLPQE 367
D ++ L P +
Sbjct 304 SDLISSPFLGPHPHQ 318
>sp|Q5RAI7|BHE40_PONAB Class E basic helix-loop-helix protein
40 OS=Pongo abelii OX=9601 GN=BHLHE40 PE=2 SV=1
Length=412
Score = 68.0 bits (164), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/195 (19%), Positives = 75/195 (38%), Gaps = 12/195 (6%)
Query 59 GRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVP--TCNAMSRKLDKLTVLR 116
R + + + H IEK+RRD++N I +L L+P L+K VL
Sbjct 39 SRRGIKRSEDSKETYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLE 98
Query 117 MAVQHMKTLRGATNPYTEA--NYKPTFLSDDELKHLILRAADGFLFVV-GCDRGKILFVS 173
+ ++H+K L + + + + + + + F C R + +++
Sbjct 99 LTLKHVKALTNLIDQQQQKIIALQSGLQAGELSGRNVETGQEMFCSGFQTCAREVLQYLA 158
Query 174 ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT 233
+ + + DL L +LH ++ S + P +++D K +
Sbjct 159 K------HENTRDLKSSQLVTHLHRVVSELLQGGTSRKSSDPAPKVMDFKEKPSSPAKGS 212
Query 234 PGPSRLC-SGARRSF 247
GP + C +R+F
Sbjct 213 EGPGKNCVPVIQRTF 227
>sp|Q10186|YAWC_SCHPO Uncharacterized bHLH domain-containing protein
C3F10.12c OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) OX=284812 GN=SPAC3F10.12c PE=3 SV=1
Length=201
Score = 64.9 bits (156), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/171 (17%), Positives = 64/171 (37%), Gaps = 24/171 (14%)
Query 3 DQRMDISSTISDFMSPGPTDLLSSSLG------------------TSGVDCNRKRKGSST 44
+ M I+ + PG + L+ + +D +K
Sbjct 2 QRDMSINHLLPPLSGPGQVEQLTGFTNDIVYNDFYAHAVSYNPYPSEKIDFPKKNTAHKN 61
Query 45 DYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNA 104
++ + + K R +H ++E+RRR+ ++ I ELA++VP C
Sbjct 62 STTSTV-ASSGNTTMEKPCVGSEEWYKAKRLSHKEVERRRREAISEGIKELANIVPGCEK 120
Query 105 MSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAA 155
+K ++L+ Q++++L+ E + ++D ++ L A
Sbjct 121 -----NKGSILQRTAQYIRSLKEMEEMCREKSNLEKLVADHTIQELARENA 166
>sp|Q5EA15|BHE40_BOVIN Class E basic helix-loop-helix protein
40 OS=Bos taurus OX=9913 GN=BHLHE40 PE=2 SV=1
Length=412
Score = 67.6 bits (163), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/262 (18%), Positives = 89/262 (34%), Gaps = 19/262 (7%)
Query 59 GRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVP--TCNAMSRKLDKLTVLR 116
R + + + H IEK+RRD++N I +L L+P L+K VL
Sbjct 39 SRRGIKRSEDSKETYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLE 98
Query 117 MAVQHMKTLRGATNPYTEA--NYKPTFLSDDELKHLILRAADGFLFVV-GCDRGKILFVS 173
+ ++H+K L + + + + D + + F C R + +++
Sbjct 99 LTLKHVKALTNLIDQQQQKIIALQSGLQAGDLSGRNVEAGQEMFCSGFQTCAREVLQYLA 158
Query 174 ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT 233
+ + + DL L +LH ++ S + P + +D K +
Sbjct 159 K------HENTRDLKSSQLVTHLHRVVSELLQGGTSRKPSDPAPKAMDFKEKPSSLAKGS 212
Query 234 PGPSRLC-SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWP 292
GP + C +R+F S + D + KS + Y KS
Sbjct 213 EGPGKNCVPVIQRTF------AHSSGEQSGSDTDTDSGYGGESEKSELRVE-QPYFKSDH 265
Query 293 PTKMGLDEDNEPDNEGCNLSCL 314
+ + E + +
Sbjct 266 GRRFTMGERISAIKQESEEPPM 287
>sp|B3F209|BHE40_SHEEP Class E basic helix-loop-helix protein
40 OS=Ovis aries OX=9940 GN=BHLHE40 PE=2 SV=1
Length=412
Score = 67.2 bits (162), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/262 (18%), Positives = 89/262 (34%), Gaps = 19/262 (7%)
Query 59 GRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVP--TCNAMSRKLDKLTVLR 116
R + + + H IEK+RRD++N I +L L+P L+K VL
Sbjct 39 SRRGIKRSEDSKETYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLE 98
Query 117 MAVQHMKTLRGATNPYTEA--NYKPTFLSDDELKHLILRAADGFLFVV-GCDRGKILFVS 173
+ ++H+K L + + + + D + + F C R + +++
Sbjct 99 LTLKHVKALTNLIDQQQQKIIALQSGLQAGDLSGRNVEAGQEMFCSGFQTCAREVLQYLA 158
Query 174 ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT 233
+ + + DL L +LH ++ S + P + +D K +
Sbjct 159 K------HENTRDLKSSQLVTHLHRVVSELLQGGTSRKPSDPAPKAMDFKEKPSSLAKGS 212
Query 234 PGPSRLC-SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWP 292
GP + C +R+F S + D + KS + Y KS
Sbjct 213 EGPGKNCVPVIQRTF------AHSSGEQSGSDTDTDSGYGGESEKSELRVE-QPYFKSDH 265
Query 293 PTKMGLDEDNEPDNEGCNLSCL 314
+ + E + +
Sbjct 266 GRRFTMGERISAIKQESEEPPM 287
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis
thaliana OX=3702 GN=UNE10 PE=1 SV=1
Length=399
Score = 67.2 bits (162), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 6/129 (5%)
Query 9 SSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQG 68
S S ++ D+ +S D S + M+ +++ G
Sbjct 152 SGGGSQRLTMDTYDVGFTSTSMGSHDNTIDDHDSVCHSRPQMEDEEEKKAGGKSSVS--T 209
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
+ A H+Q E++RRDK+N + L LVP S K DK ++L ++++K L+
Sbjct 210 KRSRAAAIHNQSERKRRDKINQRMKTLQKLVP----NSSKTDKASMLDEVIEYLKQLQAQ 265
Query 129 TNPYTEANY 137
+ + N
Sbjct 266 VSMMSRMNM 274
>sp|Q7KM13|HEY_DROME Hairy/enhancer-of-split related with YRPW
motif protein OS=Drosophila melanogaster OX=7227 GN=Hey PE=2
SV=1
Length=425
Score = 66.9 bits (161), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 53/95 (56%), Gaps = 5/95 (5%)
Query 38 KRKGSSTDYQESMDTDKDDPHGRLEYTEHQG-RIKNAREAHSQIEKRRRDKMNSFIDELA 96
KR S +D + ++ ++ +E ++ + ++ IEK+RRD++NS + EL
Sbjct 67 KRTLSESDCDD--LYSEESSKEQISPSEPGSCQLMSRKKRRGVIEKKRRDRINSSLTELK 124
Query 97 SLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGAT 129
LVP+ S KL+K +L++ V+H+K+L+ T
Sbjct 125 RLVPSAYEKQGSAKLEKAEILQLTVEHLKSLQSKT 159
>sp|O35780|BHE40_RAT Class E basic helix-loop-helix protein 40
OS=Rattus norvegicus OX=10116 GN=Bhlhe40 PE=1 SV=1
Length=411
Score = 66.9 bits (161), Expect = 2e-10, Method: Composition-based stats.
Identities = 54/315 (17%), Positives = 99/315 (31%), Gaps = 41/315 (13%)
Query 59 GRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVP--TCNAMSRKLDKLTVLR 116
R + + + H IEK+RRD++N I +L L+P L+K VL
Sbjct 39 SRRGIKRSEDSKETYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLE 98
Query 117 MAVQHMKTLRGATNPYTEA--NYKPTFLSDDELKHLILRAADGFLFVV-GCDRGKILFVS 173
+ ++H+K L + + + + D I + F C R + +++
Sbjct 99 LTLKHVKALTNLIDQQQQKIMALQSGLQAGDLSGKNIEAGQEMFCSGFQTCAREVLQYLA 158
Query 174 ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT 233
+ + + DL L +LH ++ S + +D K +
Sbjct 159 K------HENTRDLKSSQLVTHLHRVVSELLQGSASRKPLDSAPKPVDFKEKPSFLAKGS 212
Query 234 PGPSRLC-SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWP 292
GP + C +R+F PS + T S + + Y KS
Sbjct 213 EGPGKNCVPVIQRTF-------APSGGEQSGSDTDTDSGYGGELEKGDLRSEQPYFKSDH 265
Query 293 PTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVF 352
+ + E + P +++ E G FV
Sbjct 266 GRRFTVGERVSTIKQES--------------EEPPTKKSRMQLSDEE--------GHFVG 303
Query 353 VDQRATAILAYLPQE 367
D + L P +
Sbjct 304 SDLMGSPFLGPHPHQ 318
>sp|O35185|BHE40_MOUSE Class E basic helix-loop-helix protein
40 OS=Mus musculus OX=10090 GN=Bhlhe40 PE=1 SV=1
Length=411
Score = 66.5 bits (160), Expect = 3e-10, Method: Composition-based stats.
Identities = 50/315 (16%), Positives = 92/315 (29%), Gaps = 41/315 (13%)
Query 59 GRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVP--TCNAMSRKLDKLTVLR 116
R + + + H IEK+RRD++N I +L L+P L+K VL
Sbjct 39 SRRGIKRSEDSKETYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLE 98
Query 117 MAVQHMKTLRGATNPYTEA--NYKPTFLSDDELKHLILRAADGFLFVV-GCDRGKILFVS 173
+ ++H+K L + + + + D + + F C R + +++
Sbjct 99 LTLKHVKALTNLIDQQQQKIIALQSGLQAGDLSGRNLEAGQEMFCSGFQTCAREVLQYLA 158
Query 174 ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT 233
+ + + DL L +LH ++ S + +D K +
Sbjct 159 K------HENTRDLKSSQLVTHLHRVVSELLQGGASRKPLDSAPKAVDLKEKPSFLAKGS 212
Query 234 PGPSRLC-SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWP 292
GP + C +R+F + G L+S
Sbjct 213 EGPGKNCVPVIQRTF--------------APSGGEQSGSDTDTDSGYGGELEKGDLRSEQ 258
Query 293 PTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVF 352
P E + + P S E +G F
Sbjct 259 PYFKSDHGRRFAVGER--------VSTIKQESEEPPTKKSRMQLSEE-------EGHFAG 303
Query 353 VDQRATAILAYLPQE 367
D + L P +
Sbjct 304 SDLMGSPFLGPHPHQ 318
>sp|A0A286LEZ9|PSIR_PSICY Psilocybin cluster transcription regulator
OS=Psilocybe cyanescens OX=93625 GN=psiR PE=2 SV=1
Length=370
Score = 65.7 bits (158), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 50/129 (39%), Gaps = 7/129 (5%)
Query 29 GTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTE----HQGRIKNAREAHSQIEKRR 84
G + +D + G + + + + GR + ++ H ++E+RR
Sbjct 161 GNTSIDSPSAKDGENGTGEFNQTSTSTPSGGRRGGRSATMGSDEWSRQRKDNHKEVERRR 220
Query 85 RDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSD 144
R +N I+EL +VP+ + K +L AVQ++ L+ E L D
Sbjct 221 RGNINEGINELGRIVPSGSGEKA---KGAILSRAVQYIHHLKENEARNIEKWTLEKLLMD 277
Query 145 DELKHLILR 153
+ L +
Sbjct 278 QAMGDLQAQ 286
>sp|P19484|TFEB_HUMAN Transcription factor EB OS=Homo sapiens
OX=9606 GN=TFEB PE=1 SV=3
Length=476
Score = 64.9 bits (156), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/127 (24%), Positives = 50/127 (39%), Gaps = 10/127 (8%)
Query 13 SDFMSPGPTDLLSSSLGTSGVDCNRKRK-----GSSTDYQESMDTDKDDPHGRLEYTEHQ 67
+ P L SS L D SS + + D R E Q
Sbjct 176 PEMQMPNTLPLSSSHLNVYSSDPQVTASLVGVTSSSCPADLTQKRELTDAESRALAKERQ 235
Query 68 GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
++ H+ IE+RRR +N I EL L+P N + + +K T+L+ +V +++ ++
Sbjct 236 -----KKDNHNLIERRRRFNINDRIKELGMLIPKANDLDVRWNKGTILKASVDYIRRMQK 290
Query 128 ATNPYTE 134
E
Sbjct 291 DLQKSRE 297
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis
thaliana OX=3702 GN=SPT PE=1 SV=1
Length=373
Score = 64.2 bits (154), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 43/96 (45%), Gaps = 6/96 (6%)
Query 43 STDYQESMD--TDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVP 100
+ +E + D+ + + A E H+ EKRRR ++N + L SL+P
Sbjct 166 DCESEEGGEAVVDEAPSSKSGPSSRSSSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIP 225
Query 101 TCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEAN 136
S K DK ++L A++++K L+ T N
Sbjct 226 ----NSNKTDKASMLDEAIEYLKQLQLQVQMLTMRN 257
>sp|H2KZZ2|HLH30_CAEEL Helix-loop-helix protein 30 OS=Caenorhabditis
elegans OX=6239 GN=hlh-30 PE=1 SV=1
Length=524
Score = 64.5 bits (155), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 55/145 (38%), Gaps = 14/145 (10%)
Query 18 PGPTDLLSSSLGTSGVDCNRKRKG------SSTDYQESMDTDK--------DDPHGRLEY 63
PG + S S + SS+ S+D +K G
Sbjct 195 PGASSRAGSGHSGSPITIPNAMSNNFRQVVSSSAPTSSIDIEKMIGAVSNGGGNSGGDND 254
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMK 123
E R + ++ H+ IE+RRR +N I EL ++P + KL+K T+L+ + +++
Sbjct 255 PEDYYRDRRKKDIHNMIERRRRYNINDRIKELGQMLPKNTSEDMKLNKGTILKASCDYIR 314
Query 124 TLRGATNPYTEANYKPTFLSDDELK 148
L+ + + L K
Sbjct 315 VLQKDREQAMKTQQQQKSLESTAHK 339
>sp|Q9R210|TFEB_MOUSE Transcription factor EB OS=Mus musculus
OX=10090 GN=Tfeb PE=1 SV=2
Length=475
Score = 64.2 bits (154), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/127 (24%), Positives = 50/127 (39%), Gaps = 10/127 (8%)
Query 13 SDFMSPGPTDLLSSSLGTSGVDCNRKRK-----GSSTDYQESMDTDKDDPHGRLEYTEHQ 67
+ P L SS L D SS + + D R E Q
Sbjct 175 PEMQMPNTLPLSSSHLNVYSGDPQVTASMVGVTSSSCPADLTQKRELTDAESRALAKERQ 234
Query 68 GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
++ H+ IE+RRR +N I EL L+P N + + +K T+L+ +V +++ ++
Sbjct 235 -----KKDNHNLIERRRRFNINDRIKELGMLIPKANDLDVRWNKGTILKASVDYIRRMQK 289
Query 128 ATNPYTE 134
E
Sbjct 290 DLQKSRE 296
>sp|P0DPB0|PSIR_PSICU Psilocybin cluster transcription regulator
OS=Psilocybe cubensis OX=181762 GN=psiR PE=3 SV=1
Length=358
Score = 63.4 bits (152), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/153 (18%), Positives = 52/153 (34%), Gaps = 12/153 (8%)
Query 10 STISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQ---------ESMDTDKDDPHGR 60
S ++ +P P + + S++ + GR
Sbjct 128 SAVAMQAAPAPIQHPDQQTNRNDGEQAGNASASTSGKDGDNAEFVPPPAPAPTTGRRGGR 187
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
+ ++ H ++E+RRR +N I+EL +VP+ + K +L AVQ
Sbjct 188 SATMGSDEWSRQRKDNHKEVERRRRGNINEGINELGRIVPSGSGEKA---KGAILSRAVQ 244
Query 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
++ L+ E L D + L +
Sbjct 245 YIHHLKENEARNIEKWTLEKLLMDQAMGDLQAQ 277
>sp|P49379|CBF1_KLULA Centromere-binding protein 1 OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) OX=284590 GN=CBF1 PE=1 SV=2
Length=359
Score = 63.4 bits (152), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 54/141 (38%), Gaps = 10/141 (7%)
Query 19 GPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKN-----A 73
G ++ + + G+ + + G+ D +E+ R
Sbjct 191 GSSNETAGADGSGDREDGSQPDGTEHDDEENGGAGAGGAAPRRGRKPGTETGSTAWKQQR 250
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
+E+H ++E+RRR +N+ I++L+ L+P K +L A ++++ ++
Sbjct 251 KESHKEVERRRRQNINTAIEKLSDLLPVKET-----SKAAILSRAAEYIQKMKETETANI 305
Query 134 EANYKPTFLSDDELKHLILRA 154
E L + ++ L
Sbjct 306 EKWTLQKLLGEQQVSSLTSAN 326
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis
thaliana OX=3702 GN=PIL1 PE=1 SV=1
Length=416
Score = 63.4 bits (152), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 6/125 (5%)
Query 13 SDFMSPGP-TDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIK 71
S S G DL SL D + ++ + D + + K
Sbjct 170 SSKFSRGTSRDLSCCSLKRKYGDIEEEESTYLSNNSDDES-DDAKTQVHARTRKPVTKRK 228
Query 72 NAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNP 131
+ E H E++RRD+ N + L L+P C K DK ++L A+++M+TL+
Sbjct 229 RSTEVHKLYERKRRDEFNKKMRALQDLLPNCY----KDDKASLLDEAIKYMRTLQLQVQM 284
Query 132 YTEAN 136
+ N
Sbjct 285 MSMGN 289
>sp|Q64092|TFE3_MOUSE Transcription factor E3 OS=Mus musculus
OX=10090 GN=Tfe3 PE=1 SV=2
Length=572
Score = 64.2 bits (154), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/144 (23%), Positives = 65/144 (45%), Gaps = 13/144 (9%)
Query 55 DDPHGRLEYTEHQGR----IKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLD 110
+ P+ + E +E + + + ++ H+ IE+RRR +N I EL +L+P N + +
Sbjct 324 ELPNIKREISETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPEMRWN 383
Query 111 KLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDE------LKHLILRA-ADGFLFVVG 163
K T+L+ +V +++ L+ + + L ++ L L+A G V
Sbjct 384 KGTILKASVDYIRKLQKEQQRSKDLESRQRSLEQANRSLQLRIQELELQAQIHG--LPVP 441
Query 164 CDRGKILFVSESVFKILNYSQNDL 187
+ G + + SV L Q D+
Sbjct 442 PNPGLLSLTTSSVSDSLKPEQLDI 465
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana
OX=3702 GN=ALC PE=2 SV=1
Length=210
Score = 61.1 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 56/134 (42%), Gaps = 14/134 (10%)
Query 7 DISSTISDFMSPGPTDLLSSSLGTSGVD-----CNRKRKGSSTDYQESMDTDKDDPHGRL 61
++SS + +S PT SS ++ V G+ + + D +
Sbjct 18 ELSSFLRQILSRTPTAQPSSPPKSTNVSSAETFFPSVSGGAVSSVGYGVSETGQDKYAFE 77
Query 62 -EYTEHQGRIKNAR----EAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
+ + + R R + H+ EK+RR K+N + L L+P S K DK ++L
Sbjct 78 HKRSGAKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIP----NSNKTDKASMLD 133
Query 117 MAVQHMKTLRGATN 130
A++++K L+
Sbjct 134 EAIEYLKQLQLQVQ 147
>sp|O75030|MITF_HUMAN Microphthalmia-associated transcription
factor OS=Homo sapiens OX=9606 GN=MITF PE=1 SV=2
Length=526
Score = 63.8 bits (153), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 45/85 (53%), Gaps = 1/85 (1%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
+ + ++ H+ IE+RRR +N I EL +L+P N + +K T+L+ +V +++ L+
Sbjct 308 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQRE 367
Query 129 TNPYTEANYKPTFLSDDELKHLILR 153
E + L +HL+LR
Sbjct 368 QQRAKELENRQKKLEHAN-RHLLLR 391
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED
TRANSCRIPTION FACTOR OS=Arabidopsis thaliana OX=3702
GN=FIT PE=1 SV=1
Length=318
Score = 62.2 bits (149), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 6/130 (5%)
Query 3 DQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLE 62
D+ I + + D P L S++ S + + + E D DD
Sbjct 60 DENQFIPTPVDDLFDELPD--LDSNVAESFRSFDGDSVRAGGEEDEEDYNDGDDSSATTT 117
Query 63 YTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
+ + K R E+RRR +M + L SLVP K+DK +++ AV ++
Sbjct 118 NNDGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVP----NITKMDKASIVGDAVLYV 173
Query 123 KTLRGATNPY 132
+ L+
Sbjct 174 QELQSQAKKL 183
>sp|P19532|TFE3_HUMAN Transcription factor E3 OS=Homo sapiens
OX=9606 GN=TFE3 PE=1 SV=4
Length=575
Score = 63.0 bits (151), Expect = 5e-09, Method: Composition-based stats.
Identities = 21/93 (23%), Positives = 47/93 (51%), Gaps = 4/93 (4%)
Query 55 DDPHGRLEYTEHQGR----IKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLD 110
+ P+ + E +E + + + ++ H+ IE+RRR +N I EL +L+P + + +
Sbjct 325 ELPNIKREISETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWN 384
Query 111 KLTVLRMAVQHMKTLRGATNPYTEANYKPTFLS 143
K T+L+ +V +++ L+ + + L
Sbjct 385 KGTILKASVDYIRKLQKEQQRSKDLESRQRSLE 417
>sp|E3SXU4|BHLHW_PEA Basic helix-loop-helix protein A OS=Pisum
sativum OX=3888 GN=BHLH PE=3 SV=1
Length=652
Score = 62.6 bits (150), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 8/104 (8%)
Query 36 NRKRKGSSTDYQESMDTDKDDPHGRLEY-TEHQGRIKNAREAHSQIEKRRRDKMNSFIDE 94
+ +S +++ + +DP RL Q + H E+RRR+K+N
Sbjct 430 TKNHDETSPQTRDTAGVNSNDPSARLRGKGTPQDELSA---NHVLAERRRREKLNERFII 486
Query 95 LASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYK 138
L SLVP K+DK ++L ++++K LR N +
Sbjct 487 LRSLVPF----VTKMDKASILGDTIEYLKQLRRKIQDLETRNRQ 526
>sp|Q05B92|TFE3_BOVIN Transcription factor E3 OS=Bos taurus OX=9913
GN=TFE3 PE=2 SV=1
Length=573
Score = 62.2 bits (149), Expect = 7e-09, Method: Composition-based stats.
Identities = 21/93 (23%), Positives = 47/93 (51%), Gaps = 4/93 (4%)
Query 55 DDPHGRLEYTEHQGR----IKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLD 110
+ P+ + E +E + + + ++ H+ IE+RRR +N I EL +L+P + + +
Sbjct 323 ELPNIKREISETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWN 382
Query 111 KLTVLRMAVQHMKTLRGATNPYTEANYKPTFLS 143
K T+L+ +V +++ L+ + + L
Sbjct 383 KGTILKASVDYIRKLQKEQQRSKDLESRQRSLE 415
>sp|O88368|MITF_RAT Microphthalmia-associated transcription factor
OS=Rattus norvegicus OX=10116 GN=Mitf PE=2 SV=2
Length=526
Score = 61.5 bits (147), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 45/85 (53%), Gaps = 1/85 (1%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
+ + ++ H+ IE+RRR +N I EL +L+P N + +K T+L+ +V +++ L+
Sbjct 308 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQRE 367
Query 129 TNPYTEANYKPTFLSDDELKHLILR 153
+ + L +HL+LR
Sbjct 368 QQRAKDLENRQKKLEHAN-RHLLLR 391
>sp|Q08874|MITF_MOUSE Microphthalmia-associated transcription
factor OS=Mus musculus OX=10090 GN=Mitf PE=1 SV=4
Length=526
Score = 61.5 bits (147), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 45/85 (53%), Gaps = 1/85 (1%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
+ + ++ H+ IE+RRR +N I EL +L+P N + +K T+L+ +V +++ L+
Sbjct 308 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQRE 367
Query 129 TNPYTEANYKPTFLSDDELKHLILR 153
+ + L +HL+LR
Sbjct 368 QQRAKDLENRQKKLEHAN-RHLLLR 391
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis
thaliana OX=3702 GN=BHLH13 PE=1 SV=1
Length=590
Score = 61.5 bits (147), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/128 (19%), Positives = 50/128 (39%), Gaps = 7/128 (5%)
Query 21 TDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQI 80
D ++S S + + + G D ++ D+ + + + H +
Sbjct 381 IDFSAASSRASENNSDGEGGGEWAD---AVGADESGNNRPRKRGRRPANGRAEALNHVEA 437
Query 81 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPT 140
E++RR+K+N L S+VP K+DK ++L AV ++ L +
Sbjct 438 ERQRREKLNQRFYALRSVVP----NISKMDKASLLGDAVSYINELHAKLKVMEAERERLG 493
Query 141 FLSDDELK 148
+ S+ +
Sbjct 494 YSSNPPIS 501
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis
thaliana OX=3702 GN=BHLH56 PE=3 SV=2
Length=445
Score = 61.1 bits (146), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/107 (18%), Positives = 42/107 (39%), Gaps = 4/107 (4%)
Query 24 LSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKR 83
+ + + + + + ++ + E H+ E+R
Sbjct 207 AAGTPSSGVCKAETEPVQIQPATESKLKAREETHGTEEARGSTSRKRSRTAEMHNLAERR 266
Query 84 RRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
RR+K+N + L L+P CN K K++ L A++++K+L+
Sbjct 267 RREKINEKMKTLQQLIPRCN----KSTKVSTLDDAIEYVKSLQSQIQ 309
>sp|Q6GQ26|SRBP2_XENLA Sterol regulatory element-binding protein
2 OS=Xenopus laevis OX=8355 GN=srebf2 PE=2 SV=1
Length=1088
Score = 61.5 bits (147), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/294 (19%), Positives = 90/294 (31%), Gaps = 45/294 (15%)
Query 5 RMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYT 64
+ D S ++ +P T L +L T+ + GS+ +M ++
Sbjct 219 KADGSPVMTAVQNPAITTLA-GTLQTTALQVPTLM-GSNGTILTTMPVMMGQEKMPIKQV 276
Query 65 EHQ------GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMA 118
+ R H+ IEKR R +N I EL LV K+ K VL+ A
Sbjct 277 PGSLKLAEVPKEGERRTTHNIIEKRYRSSINDKIMELKDLV---MGTDAKMHKSGVLKKA 333
Query 119 VQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFK 178
+ ++K L+ + N L K+ L+ D +S V
Sbjct 334 IDYIKYLQQVNQKLRQENM---ALKLANQKNKYLKGID---------------LSSLVDT 375
Query 179 ILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPV----KTDITP 234
+ ++ +L D S S +D++ G P+ K P
Sbjct 376 SIGMKIDEFNQNALMMSPPASD--------SGSPAVFSPYSVDSEPGSPLLDDEKVKDEP 427
Query 235 GPSRLCSGARRSFFCRM-KCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGY 287
RS RM C + + S + H TG
Sbjct 428 DSPTGLGMMDRS---RMLLCTMTFLCLSFNPLTSLLHPESGQYSERAVQHGTGR 478
>sp|P70120|HES5_MOUSE Transcription factor HES-5 OS=Mus musculus
OX=10090 GN=Hes5 PE=1 SV=1
Length=167
Score = 57.2 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/102 (23%), Positives = 44/102 (43%), Gaps = 9/102 (9%)
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVP---TCNAMSRKLDKLTVLRM 117
+E + + + + +EK RRD++NS I++L L+ + + KL+K +L M
Sbjct 8 VEMLSPKEKNRLRKPV---VEKMRRDRINSSIEQLKLLLEQEFARHQPNSKLEKADILEM 64
Query 118 AVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFL 159
AV ++K + + + L+ A FL
Sbjct 65 AVSYLKHSKAFAAAAGPKSLHQDYSEGYSW---CLQEAVQFL 103
>sp|Q5TA89|HES5_HUMAN Transcription factor HES-5 OS=Homo sapiens
OX=9606 GN=HES5 PE=2 SV=1
Length=166
Score = 56.8 bits (135), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 6/99 (6%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVP---TCNAMSRKLDKLTVLRMAVQ 120
E + R +EK RRD++NS I++L L+ + + KL+K +L MAV
Sbjct 8 VELLSPKEKNRLRKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPNSKLEKADILEMAVS 67
Query 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFL 159
++K + + + L+ A FL
Sbjct 68 YLKHSKAFVAAAGPKSLHQDYSEGYSW---CLQEAVQFL 103
>sp|Q4WIN1|SRBA_ASPFU Transcription regulator srbA precursor OS=Aspergillus
fumigatus (strain ATCC MYA-4609 / CBS 101355 /
FGSC A1100 / Af293) OX=330879 GN=srbA PE=1 SV=1
Length=988
Score = 60.7 bits (145), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/162 (23%), Positives = 54/162 (33%), Gaps = 30/162 (19%)
Query 5 RMDISSTIS-DFMSPGPTDLLSSSL-----------GTSGVDCNRKRKGSSTDYQESMDT 52
D S IS DF SP L G + + SS T
Sbjct 86 HKDFSPDISLDFKSPSLGFFPGGDLNTNVSPQPDHVGAGSLSVHSNSPLSSIGASRKRKT 145
Query 53 DKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNA-------- 104
DD + + + + AH+ IEKR R +N I EL VP+ A
Sbjct 146 GSDDDGSTMTSMFKAKQAPSKKRAHNVIEKRYRANLNEKIAELRDSVPSLRASYKQANGN 205
Query 105 ----------MSRKLDKLTVLRMAVQHMKTLRGATNPYTEAN 136
+ KL+K ++L A ++++ L E N
Sbjct 206 SGDDDDDGVTSASKLNKASILSKATEYIRHLEIRNKRLEEEN 247
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES
OS=Arabidopsis thaliana OX=3702 GN=AMS PE=1 SV=2
Length=571
Score = 60.3 bits (144), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/136 (23%), Positives = 54/136 (40%), Gaps = 13/136 (10%)
Query 34 DCNRK-RKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFI 92
D N R S +D + +D + D + + Q + E+RRR K+N +
Sbjct 278 DMNENGRVDSGSDCSDQIDDEDDPKYKKKSGKGSQAKNL-------MAERRRRKKLNDRL 330
Query 93 DELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLIL 152
L SLVP KLD+ ++L A+ ++K L+ + + + D +
Sbjct 331 YALRSLVPRI----TKLDRASILGDAINYVKELQNEAKELQDELEENSETEDGSNRPQGG 386
Query 153 RAADGFLFVVGCDRGK 168
+ +G V G G
Sbjct 387 MSLNG-TVVTGFHPGL 401
>sp|O97676|SRBP1_PIG Sterol regulatory element-binding protein
1 OS=Sus scrofa OX=9823 GN=SREBF1 PE=2 SV=2
Length=1151
Score = 60.7 bits (145), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/66 (35%), Positives = 33/66 (50%), Gaps = 3/66 (5%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
R AH+ IEKR R +N I EL LV KL+K VLR A+ +++ L+ +
Sbjct 325 KRTAHNAIEKRYRSSINDKIIELKDLV---VGTEAKLNKSAVLRKAIDYIRFLQQSNQKL 381
Query 133 TEANYK 138
+ N
Sbjct 382 KQENLS 387
>sp|P17106|CBF1_YEAST Centromere-binding protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CBF1
PE=1 SV=2
Length=351
Score = 59.1 bits (141), Expect = 4e-08, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 39/95 (41%), Gaps = 5/95 (5%)
Query 56 DPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVL 115
K +++H ++E+RRR+ +N+ I+ L+ L+P + K +L
Sbjct 206 RGRKPTTLATTDEWKKQRKDSHKEVERRRRENINTAINVLSDLLPVRES-----SKAAIL 260
Query 116 RMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHL 150
A ++++ L+ E LS+ L
Sbjct 261 ACAAEYIQKLKETDEANIEKWTLQKLLSEQNASQL 295
>sp|A0A3Q7H216|MTB3_SOLLC Transcription factor MTB3 OS=Solanum
lycopersicum OX=4081 GN=MTB3 PE=2 SV=1
Length=517
Score = 59.9 bits (143), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 54/129 (42%), Gaps = 9/129 (7%)
Query 26 SSLGTSGVDCNRKRKGSSTDYQESMDTDKD-DPHGRLEYTEHQGRIKNAREAHSQIEKRR 84
++LG+S V G +D E ++ D + + H + E++R
Sbjct 281 AALGSSQV-YGNSSNGYRSDEGEGKLYKEELDERKPRKRGRKPANGREEALNHVEAERQR 339
Query 85 RDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSD 144
R+K+N L ++VP K+DK ++L A+ ++ L+ + + + D
Sbjct 340 REKLNQRFYALRAVVP----NISKMDKASLLGDAIAYITDLQARIRVL---DAEKEMVGD 392
Query 145 DELKHLILR 153
+ + +IL
Sbjct 393 KQKQQVILE 401
>sp|Q9C0J9|BHE41_HUMAN Class E basic helix-loop-helix protein
41 OS=Homo sapiens OX=9606 GN=BHLHE41 PE=1 SV=1
Length=482
Score = 59.9 bits (143), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/101 (25%), Positives = 38/101 (38%), Gaps = 3/101 (3%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVP--TCNAMSRKLDKLTVLRM 117
+ + H IEK+RRD++N I +L L+P L+K VL +
Sbjct 32 PKRSMKRDDTKDTYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLEL 91
Query 118 AVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGF 158
++H+K L T + LK I D F
Sbjct 92 TLKHLKALTALTE-QQHQKIIALQNGERSLKSPIQSDLDAF 131
>sp|O35779|BHE41_RAT Class E basic helix-loop-helix protein 41
OS=Rattus norvegicus OX=10116 GN=Bhlhb3 PE=2 SV=2
Length=410
Score = 59.5 bits (142), Expect = 4e-08, Method: Composition-based stats.
Identities = 45/262 (17%), Positives = 78/262 (30%), Gaps = 19/262 (7%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVP--TCNAMSRKLDKLTVLRM 117
+ + H IEK+RRD++N I +L L+P L+K VL +
Sbjct 32 PKRSLKRDDTKDTYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLEL 91
Query 118 AVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVV-GCDRGKILFVSESV 176
++H+K L T + LK + D F C + + + +
Sbjct 92 TLKHLKALTALTE-QQHQKIIALQNGERSLKSPVQADLDAFHSGFQTCAKEVLQY----L 146
Query 177 FKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGP 236
+ +++ + L +LH V QL + P A
Sbjct 147 ARFESWTPREPRCAQLVSHLH-----AVATQLLTPQVTPGRGPGRAP------CSAGAAA 195
Query 237 SRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKM 296
+ R + + D D S + ++ G + P
Sbjct 196 ASGSERVARCVPVIQRTQPGTEPEHDTDTDSGYGGEAEQGRAAVKQEPPGDPSAAPKRLK 255
Query 297 GLDEDNEPDNEGCNLSCLVAIG 318
E L LVA+G
Sbjct 256 LEARGALLGPEPALLGSLVALG 277
>sp|P38165|RTG3_YEAST Retrograde regulation protein 3 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RTG3
PE=1 SV=2
Length=486
Score = 59.5 bits (142), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 57/165 (35%), Gaps = 17/165 (10%)
Query 10 STISDFMSPGPTDLLSS---------SLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
+++S SP SS S ++ R R S + + +
Sbjct 215 ASVSSTYSPKVRSPSSSFRAGSFLSSSFRHGSINTPRTRHTSIS-SNMTENIGPGSVPKI 273
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTC------NAMSRKLDKLTV 114
L +++ RE H+ +E+RRR+ + I EL LVP K +K +
Sbjct 274 LGGLTSDEKLRRKREFHNAVERRRRELIKQKIKELGQLVPPSLLNYDDLGKQIKPNKGII 333
Query 115 LRMAVQHMKTLRGATNPYTE-ANYKPTFLSDDELKHLILRAADGF 158
L V++++ L + + E K + A F
Sbjct 334 LDRTVEYLQYLAEILEIQARKKKALLAKIKELEEKKSSVAALSPF 378
>sp|Q60416|SRBP1_CRIGR Sterol regulatory element-binding protein
1 OS=Cricetulus griseus OX=10029 GN=SREBF1 PE=2 SV=1
Length=1133
Score = 59.9 bits (143), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/79 (33%), Positives = 37/79 (47%), Gaps = 4/79 (5%)
Query 59 GRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMA 118
G Q R + R AH+ IEKR R +N I EL LV KL+K VLR A
Sbjct 305 GSKALGSAQSRGE-KRTAHNAIEKRYRSSINDKIVELKDLV---VGTEAKLNKSAVLRKA 360
Query 119 VQHMKTLRGATNPYTEANY 137
+ +++ L+ + + N
Sbjct 361 IDYIRFLQHSNQKLKQENL 379
>sp|Q3T1I5|SRBP2_RAT Sterol regulatory element-binding protein
2 OS=Rattus norvegicus OX=10116 GN=Srebf2 PE=2 SV=1
Length=1133
Score = 59.9 bits (143), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/88 (30%), Positives = 39/88 (44%), Gaps = 6/88 (7%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
+ R H+ IEKR R +N I EL LV K+ K VLR A+ ++K L+
Sbjct 319 KEGERRTTHNIIEKRYRSSINDKIIELKDLV---MGTDAKMHKSGVLRKAIDYIKYLQQV 375
Query 129 TNPYTEANYKPTFLSDDELKHLILRAAD 156
+ + N L K+ +L+ D
Sbjct 376 NHKLRQENM---VLKLANQKNKLLKGID 400
>sp|A0A2R6QE26|BHL42_ACTCC Transcription factor BHLH42 OS=Actinidia
chinensis var. chinensis OX=1590841 GN=BHLH42 PE=1 SV=1
Length=689
Score = 59.5 bits (142), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 35/94 (37%), Gaps = 7/94 (7%)
Query 45 DYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNA 104
D D R Q + H E+RRR+K+N L SLVP
Sbjct 459 DNNSPKSATAADSASRFRKPTPQDELSA---NHVLAERRRREKLNERFIILRSLVPF--- 512
Query 105 MSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYK 138
K+DK ++L ++++K LR +
Sbjct 513 -VTKMDKASILGDTIEYVKQLRKNIQDLEARARQ 545
>sp|A0A3Q7ELQ2|MTB1_SOLLC Transcription factor MTB1 OS=Solanum
lycopersicum OX=4081 GN=MTB1 PE=1 SV=1
Length=613
Score = 59.5 bits (142), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/105 (22%), Positives = 46/105 (44%), Gaps = 7/105 (7%)
Query 25 SSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNARE---AHSQIE 81
+ + + V + +D + S D+ P + + N RE H + E
Sbjct 380 TGATSRTIVSPAHNVESEHSDVEASCKEDRAGPVDEKRPRKRGRKPANGREEPLNHVEAE 439
Query 82 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
++RR+K+N L ++VP K+DK ++L A+ ++ L+
Sbjct 440 RQRREKLNQRFYALRAVVP----NISKMDKASLLGDAIAYITELQ 480
>sp|Q3U1N2|SRBP2_MOUSE Sterol regulatory element-binding protein
2 OS=Mus musculus OX=10090 GN=Srebf2 PE=1 SV=2
Length=1130
Score = 59.9 bits (143), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/88 (30%), Positives = 39/88 (44%), Gaps = 6/88 (7%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
+ R H+ IEKR R +N I EL LV K+ K VLR A+ ++K L+
Sbjct 316 KEGERRTTHNIIEKRYRSSINDKIIELKDLV---MGTDAKMHKSGVLRKAIDYIKYLQQV 372
Query 129 TNPYTEANYKPTFLSDDELKHLILRAAD 156
+ + N L K+ +L+ D
Sbjct 373 NHKLRQENM---VLKLANQKNKLLKGID 397
>sp|Q60429|SRBP2_CRIGR Sterol regulatory element-binding protein
2 OS=Cricetulus griseus OX=10029 GN=SREBF2 PE=2 SV=1
Length=1139
Score = 59.5 bits (142), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/88 (30%), Positives = 39/88 (44%), Gaps = 6/88 (7%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
+ R H+ IEKR R +N I EL LV K+ K VLR A+ ++K L+
Sbjct 325 KEGERRTTHNIIEKRYRSSINDKIIELKDLV---MGTDAKMHKSGVLRKAIDYIKYLQQV 381
Query 129 TNPYTEANYKPTFLSDDELKHLILRAAD 156
+ + N L K+ +L+ D
Sbjct 382 NHKLRQENM---VLKLANQKNKLLKGID 406
>sp|Q12772|SRBP2_HUMAN Sterol regulatory element-binding protein
2 OS=Homo sapiens OX=9606 GN=SREBF2 PE=1 SV=2
Length=1141
Score = 59.5 bits (142), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/88 (30%), Positives = 39/88 (44%), Gaps = 6/88 (7%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
+ R H+ IEKR R +N I EL LV K+ K VLR A+ ++K L+
Sbjct 327 KEGERRTTHNIIEKRYRSSINDKIIELKDLV---MGTDAKMHKSGVLRKAIDYIKYLQQV 383
Query 129 TNPYTEANYKPTFLSDDELKHLILRAAD 156
+ + N L K+ +L+ D
Sbjct 384 NHKLRQENM---VLKLANQKNKLLKGID 408
>sp|Q9WTN3|SRBP1_MOUSE Sterol regulatory element-binding protein
1 OS=Mus musculus OX=10090 GN=Srebf1 PE=1 SV=4
Length=1134
Score = 59.5 bits (142), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/79 (33%), Positives = 37/79 (47%), Gaps = 4/79 (5%)
Query 59 GRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMA 118
G Q R + R AH+ IEKR R +N I EL LV KL+K VLR A
Sbjct 305 GSKALGSAQSRGE-KRTAHNAIEKRYRSSINDKIVELKDLV---VGTEAKLNKSAVLRKA 360
Query 119 VQHMKTLRGATNPYTEANY 137
+ +++ L+ + + N
Sbjct 361 IDYIRFLQHSNQKLKQENL 379
>sp|Q01071|ESMD_DROME Enhancer of split mdelta protein OS=Drosophila
melanogaster OX=7227 GN=E(spl)mdelta-HLH PE=1 SV=1
Length=173
Score = 56.1 bits (133), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/164 (19%), Positives = 62/164 (38%), Gaps = 10/164 (6%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMS----RKLDKLTVLRMAVQHMKTLRGA 128
+ +E++RR +MN ++DEL L+ KL+K +L + V ++K +
Sbjct 16 RKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGEQVSKLEKADILELTVNYLKA-QQQ 74
Query 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
+ P ++ D+ + +AA + G L + K L + D+
Sbjct 75 QRVANPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTHLMKQLGHQLKDMK 134
Query 189 GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDI 232
+ + + D+A+ L+ + R D G V
Sbjct 135 QEE--EII---DMAEEPVNLADQKRSKSPREEDIHHGEEVWRPW 173
>sp|Q99PV5|BHE41_MOUSE Class E basic helix-loop-helix protein
41 OS=Mus musculus OX=10090 GN=Bhlhe41 PE=1 SV=1
Length=410
Score = 58.8 bits (140), Expect = 8e-08, Method: Composition-based stats.
Identities = 20/77 (26%), Positives = 33/77 (43%), Gaps = 2/77 (3%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVP--TCNAMSRKLDKLTVLRM 117
+ + H IEK+RRD++N I +L L+P L+K VL +
Sbjct 32 PKRSLKRDDTKDTYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLEL 91
Query 118 AVQHMKTLRGATNPYTE 134
++H+K L T +
Sbjct 92 TLKHLKALTALTEQQHQ 108
>sp|P56720|SRBP1_RAT Sterol regulatory element-binding protein
1 OS=Rattus norvegicus OX=10116 GN=Srebf1 PE=1 SV=3
Length=1134
Score = 59.5 bits (142), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 33/65 (51%), Gaps = 3/65 (5%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
R AH+ IEKR R +N I EL LV KL+K VLR A+ +++ L+ +
Sbjct 318 KRTAHNAIEKRYRSSINDKIVELKDLV---VGTEAKLNKSAVLRKAIDYIRFLQHSNQKL 374
Query 133 TEANY 137
+ N
Sbjct 375 KQENL 379
>sp|Q9XEF0|BH051_ARATH Transcription factor bHLH51 OS=Arabidopsis
thaliana OX=3702 GN=BHLH51 PE=2 SV=1
Length=254
Score = 57.2 bits (136), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 14/102 (14%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
+ ++ +H EKRRRD++NS + L LVP + KLDK +L ++ +K L+
Sbjct 59 KAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSD----KLDKAALLATVIEQVKELKQK 114
Query 129 TNPY----------TEANYKPTFLSDDELKHLILRAADGFLF 160
E +P +SD E + F
Sbjct 115 AAESPIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCC 156
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis
thaliana OX=3702 GN=BHLH23 PE=2 SV=1
Length=413
Score = 58.4 bits (139), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/101 (21%), Positives = 42/101 (42%), Gaps = 9/101 (9%)
Query 30 TSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMN 89
+ D +RK + +T+ ++ + A H E+RRR K+N
Sbjct 240 ATETDITDERK-----RKTREETNVENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKIN 294
Query 90 SFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
+ L L+P C K D+ ++L ++++K+L+
Sbjct 295 EMMKALQELLPRC----TKTDRSSMLDDVIEYVKSLQSQIQ 331
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana
OX=3702 GN=TT8 PE=1 SV=2
Length=518
Score = 58.4 bits (139), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 69/191 (36%), Gaps = 33/191 (17%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSG----------VDCNRKRKGSSTDYQESM 50
+ ++ + S T++ + PT LLS S+ TS V+ ++ + T
Sbjct 277 LMEEGGNYSQTVTTLLMSHPTSLLSDSVSTSSYIQSSFATWRVENGKEHQQVKTAPSSQW 336
Query 51 DTDKDDPHG-RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKL 109
+ L R+ +H E+RRR+K+N L S+VP K+
Sbjct 337 VLKQMIFRVPFLHDNTKDKRLPREDLSHVVAERRRREKLNEKFITLRSMVPF----VTKM 392
Query 110 DKLTVLRMAVQHMKTLR------------------GATNPYTEANYKPTFLSDDELKHLI 151
DK+++L + ++ LR T + + + +D L +
Sbjct 393 DKVSILGDTIAYVNHLRKRVHELENTHHEQQHKRTRTCKRKTSEEVEVSIIENDVLLEMR 452
Query 152 LRAADGFLFVV 162
DG L +
Sbjct 453 CEYRDGLLLDI 463
>sp|P36956|SRBP1_HUMAN Sterol regulatory element-binding protein
1 OS=Homo sapiens OX=9606 GN=SREBF1 PE=1 SV=2
Length=1147
Score = 58.8 bits (140), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/77 (30%), Positives = 34/77 (44%), Gaps = 3/77 (4%)
Query 62 EYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQH 121
+ R AH+ IEKR R +N I EL LV KL+K VLR A+ +
Sbjct 313 KAPASAQSRGEKRTAHNAIEKRYRSSINDKIIELKDLV---VGTEAKLNKSAVLRKAIDY 369
Query 122 MKTLRGATNPYTEANYK 138
++ L+ + + N
Sbjct 370 IRFLQHSNQKLKQENLS 386
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE
OS=Arabidopsis thaliana OX=3702 GN=AIB PE=2 SV=2
Length=566
Score = 58.4 bits (139), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/116 (22%), Positives = 46/116 (40%), Gaps = 13/116 (11%)
Query 21 TDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNARE----- 75
+ SS+ S ++ S E G + + + K R+
Sbjct 331 IEFAGSSVAASSNPSTNTQQEKSESCTEKRPVSLLAGAGIVSVVDEKRPRKRGRKPANGR 390
Query 76 ----AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
H + E++RR+K+N L S+VP K+DK ++L A+ ++K L+
Sbjct 391 EEPLNHVEAERQRREKLNQRFYALRSVVP----NISKMDKASLLGDAISYIKELQE 442
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea
mays OX=4577 GN=R-S PE=2 SV=1
Length=612
Score = 58.0 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/89 (24%), Positives = 45/89 (51%), Gaps = 5/89 (6%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
+ +A + H E++RR+K+N L SL+P+ + +++K ++L + ++K L+
Sbjct 411 QEMSATKNHVMSERKRREKLNEMFLVLKSLLPSIH----RVNKASILAETIAYLKELQRR 466
Query 129 TNPYTEANYKPTFLSDDELKHLILRAADG 157
E++ +P + LI R + G
Sbjct 467 VQEL-ESSREPASRPSETTTRLITRPSRG 494
>sp|Q03062|HES5_RAT Transcription factor HES-5 OS=Rattus norvegicus
OX=10116 GN=Hes5 PE=2 SV=1
Length=166
Score = 54.5 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 6/99 (6%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVP---TCNAMSRKLDKLTVLRMAVQ 120
E + R +EK RRD++NS I++L L+ + + KL+K +L MAV
Sbjct 8 VEMLSPKEKNRLRKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPNSKLEKADILEMAVS 67
Query 121 HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFL 159
++K + + + L+ A FL
Sbjct 68 YLKHSKAFAAAAGPKSLHQDYSEGYSW---CLQEAVQFL 103
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis
thaliana OX=3702 GN=BHLH131 PE=2 SV=1
Length=256
Score = 56.1 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/114 (25%), Positives = 45/114 (39%), Gaps = 10/114 (9%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ A + HS E+RRR ++NS L +++P K DK +VL V++
Sbjct 84 SKTESKEVAAKKHSDAERRRRLRINSQFATLRTILP----NLVKQDKASVLGETVRYFNE 139
Query 125 LRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGC--DRGKILFVSESV 176
L+ P+ + L H D V C G + V+ES+
Sbjct 140 LKKMVQDIPTT---PSLEDNLRLDH-CNNNRDLARVVFSCSDREGLMSEVAESM 189
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis
thaliana OX=3702 GN=BHLH14 PE=1 SV=1
Length=423
Score = 57.2 bits (136), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 49/122 (40%), Gaps = 16/122 (13%)
Query 26 SSLGTSGVDCNRKRKGSS-----TDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHS-- 78
S G+ + + GS +D+ +S + R E +E H
Sbjct 187 SIFGSGKTTKHTNQTGSYPKPAVSDHSKSGNQQFGSERKRRRKLETTRVAAATKEKHHPA 246
Query 79 -----QIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
+ EK+RR+K+N L ++VP ++DK ++L AV ++++L+ +
Sbjct 247 VLSHVEAEKQRREKLNHRFYALRAIVP----KVSRMDKASLLSDAVSYIESLKSKIDDLE 302
Query 134 EA 135
Sbjct 303 TE 304
>sp|Q26263|DPN_DROME Protein deadpan OS=Drosophila melanogaster
OX=7227 GN=dpn PE=1 SV=2
Length=435
Score = 57.2 bits (136), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/119 (23%), Positives = 52/119 (44%), Gaps = 17/119 (14%)
Query 53 DKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLV-------PTCNAM 105
D +GR+ + + + +EKRRR ++N ++EL SL+ P +
Sbjct 21 DSYGSNGRMSNPNGLSKAELRKTNKPIMEKRRRARINHCLNELKSLILEAMKKDPARHT- 79
Query 106 SRKLDKLTVLRMAVQHMKTLRGAT-------NPYTEANYKPTFLSDDELKHLILRAADG 157
KL+K +L M V+H+++++ +P +K F+ E + + DG
Sbjct 80 --KLEKADILEMTVKHLQSVQRQQLNMAIQSDPSVVQKFKTGFVECAEEVNRYVSQMDG 136
>sp|O43019|SRE2_SCHPO Putative transcription factor sre2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) OX=284812
GN=sre2 PE=1 SV=1
Length=793
Score = 57.6 bits (137), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/92 (32%), Positives = 41/92 (45%), Gaps = 16/92 (17%)
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNA---------------- 104
L E + R AH+ IEKR R +N I EL VPT +
Sbjct 415 LSTQEQNLSPLSKRSAHNMIEKRYRSNLNDKIAELRDAVPTLRSGYNSTTADELKGTYVP 474
Query 105 MSRKLDKLTVLRMAVQHMKTLRGATNPYTEAN 136
+SRKL+K T+L A +++K+L+ E N
Sbjct 475 LSRKLNKATILSKATEYIKSLQSKNKKLIEEN 506
>sp|Q570R7|PIF7_ARATH Transcription factor PIF7 OS=Arabidopsis
thaliana OX=3702 GN=BHLH72 PE=1 SV=2
Length=366
Score = 56.5 bits (134), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 49/103 (48%), Gaps = 4/103 (4%)
Query 47 QESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMS 106
E+ DT+ D+ R E GR A H++ E+RRRD++N + L L+PT
Sbjct 141 SETQDTEGDEQETRGEAGRSNGRRGRAAAIHNESERRRRDRINQRMRTLQKLLPTA---- 196
Query 107 RKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKH 149
K DK+++L ++H+K L+ + P + +L
Sbjct 197 SKADKVSILDDVIEHLKQLQAQVQFMSLRANLPQQMMIPQLPP 239
>sp|Q9FMB6|BIM3_ARATH Transcription factor BIM3 OS=Arabidopsis
thaliana OX=3702 GN=BIM3 PE=1 SV=1
Length=298
Score = 56.1 bits (133), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/93 (23%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query 43 STDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTC 102
D Q D + P R + + + + R HS+ E+RRR K+N L ++P
Sbjct 5 DIDDQLEADVYSNLP-SRNDSSTGRRNRNSCRSKHSETEQRRRSKINERFQSLMDIIPQN 63
Query 103 NAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA 135
++ DK + L ++++ L+ + Y ++
Sbjct 64 QNDQKR-DKASFLLEVIEYIHFLQEKVHMYEDS 95
>sp|P91664|MAX_DROME Protein max OS=Drosophila melanogaster OX=7227
GN=Max PE=1 SV=1
Length=161
Score = 53.8 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/136 (18%), Positives = 49/136 (36%), Gaps = 6/136 (4%)
Query 34 DCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFID 93
+ + + E D+D R T + + + R H+ +E+RRRD +
Sbjct 2 SMSDDDRDIDIESDEDGDSDTGLGSSRHTNTANFTQAE-KRAHHNALERRRRDHIKESFT 60
Query 94 ELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR---GATNPYTEANYKPTFLSDDELKHL 150
L VPT K + +L+ + ++T+R E + + +++ L
Sbjct 61 NLREAVPTLKGE--KASRAQILKKTTECIQTMRRKISENQKDIEEIKRQNNIIAKQIQAL 118
Query 151 ILRAADGFLFVVGCDR 166
D F + +
Sbjct 119 ESSNGDQFSEFLSDEE 134
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea
mays OX=4577 GN=LC PE=1 SV=1
Length=610
Score = 57.2 bits (136), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 42/83 (51%), Gaps = 5/83 (6%)
Query 75 EAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTE 134
+ H E++RR+K+N L SL+P+ + +++K ++L + ++K L+ E
Sbjct 415 KNHVMSERKRREKLNEMFLVLKSLLPSIH----RVNKASILAETIAYLKELQRRVQEL-E 469
Query 135 ANYKPTFLSDDELKHLILRAADG 157
++ +P + LI R + G
Sbjct 470 SSREPASRPSETTTRLITRPSRG 492
>sp|Q336P5|MYC2_ORYSJ Transcription factor MYC2 OS=Oryza sativa
subsp. japonica OX=39947 GN=MYC2 PE=1 SV=1
Length=699
Score = 57.2 bits (136), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 51/120 (43%), Gaps = 18/120 (15%)
Query 17 SPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESM-DTDKDD-----PHGRLEYTEHQGRI 70
S PT S+ G K + +D + S+ + + P + +
Sbjct 461 SSAPTTRPSTGTGA-----PAKSESDHSDLEASVREVESSRVVAPPPEAEKRPRKRGRKP 515
Query 71 KNARE---AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
N RE H + E++RR+K+N L ++VP K+DK ++L A+ ++ LRG
Sbjct 516 ANGREEPLNHVEAERQRREKLNQRFYALRAVVP----NVSKMDKASLLGDAISYINELRG 571
>sp|O08609|MLX_MOUSE Max-like protein X OS=Mus musculus OX=10090
GN=Mlx PE=1 SV=1
Length=298
Score = 56.1 bits (133), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/104 (28%), Positives = 49/104 (47%), Gaps = 6/104 (6%)
Query 28 LGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDK 87
G +R ST +TD +D + E + + + R AH+Q E++RRD
Sbjct 86 STHKGSVVSRANSIGSTSASSVPNTDDEDSDYQQEAYKESYKDRRRR-AHTQAEQKRRDA 144
Query 88 MNSFIDELASLVPTCNA-----MSRKLDKLTVLRMAVQHMKTLR 126
+ D+L ++VPTC S+KL K VL+ + +++ L
Sbjct 145 IKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLH 188
>sp|O49687|MYC4_ARATH Transcription factor MYC4 OS=Arabidopsis
thaliana OX=3702 GN=MYC4 PE=1 SV=1
Length=589
Score = 56.8 bits (135), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/112 (19%), Positives = 43/112 (38%), Gaps = 14/112 (13%)
Query 46 YQESMDTDKDDPHGRLEYTEHQGRIKNARE---------AHSQIEKRRRDKMNSFIDELA 96
K+ R+ + K R+ H + E++RR+K+N L
Sbjct 377 SDLEASVAKEAESNRVVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLR 436
Query 97 SLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELK 148
++VP K+DK ++L A+ ++ L+ E++ + D +
Sbjct 437 AVVP----NVSKMDKASLLGDAISYISELKSKLQK-AESDKEELQKQIDVMN 483
>sp|Q9UH92|MLX_HUMAN Max-like protein X OS=Homo sapiens OX=9606
GN=MLX PE=1 SV=2
Length=298
Score = 55.7 bits (132), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/105 (28%), Positives = 49/105 (47%), Gaps = 7/105 (7%)
Query 27 SLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRD 86
S V GS++ +TD +D E + + + R AH+Q E++RRD
Sbjct 86 STRKGSVVSRANSIGSTSASSVP-NTDDEDSDYHQEAYKESYKDRRRR-AHTQAEQKRRD 143
Query 87 KMNSFIDELASLVPTCNA-----MSRKLDKLTVLRMAVQHMKTLR 126
+ D+L ++VPTC S+KL K VL+ + +++ L
Sbjct 144 AIKRGYDDLQTIVPTCQQQDFSIGSQKLSKAIVLQKTIDYIQFLH 188
>sp|A0A060KY90|MYC1_SOLLC Transcription factor MYC1 OS=Solanum
lycopersicum OX=4081 GN=MYC1 PE=1 SV=1
Length=630
Score = 56.5 bits (134), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 45/113 (40%), Gaps = 17/113 (15%)
Query 31 SGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNA-------RE---AHSQI 80
SGV G S D S D + + E + + + RE H +
Sbjct 405 SGVILPTSTMGKSGDSDHS---DLEASVVKEAVVEPEKKPRKRGRKPANGREEPLNHVEA 461
Query 81 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
E++RR+K+N L ++VP K+DK ++L A+ ++ L+
Sbjct 462 ERQRREKLNQRFYALRAVVP----NVSKMDKASLLGDAIAYINELKSKVQNSD 510
>sp|Q9CAA4|BIM2_ARATH Transcription factor BIM2 OS=Arabidopsis
thaliana OX=3702 GN=BIM2 PE=1 SV=1
Length=311
Score = 55.7 bits (132), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/138 (20%), Positives = 50/138 (36%), Gaps = 19/138 (14%)
Query 46 YQESMDTDKDDPHGRLE------------YTEHQGRIKNAREAHSQIEKRRRDKMNSFID 93
QE D ++D + + E ++ + R HS E+RRR K+N
Sbjct 7 NQEEEDYGEEDFNSKREGPSSNTTVHSNRDSKENDKASAIRSKHSVTEQRRRSKINERFQ 66
Query 94 ELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT----EANYKPTFLSDDELKH 149
L L+P K D + L + +++ L+ Y + +PT L+ H
Sbjct 67 ILRELIPNSEQ---KRDTASFLLEVIDYVQYLQEKVQKYEGSYPGWSQEPTKLTPWRNNH 123
Query 150 LILRAADGFLFVVGCDRG 167
+++ + G
Sbjct 124 WRVQSLGNHPVAINNGSG 141
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis
thaliana OX=3702 GN=NAI1 PE=2 SV=1
Length=320
Score = 55.3 bits (131), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/112 (27%), Positives = 49/112 (44%), Gaps = 7/112 (6%)
Query 27 SLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAR-EAHSQIEKRRR 85
S G+ N + Q SM D+ R + + GR + + H E++RR
Sbjct 84 SFGSPDTKTNPVETSLNFSNQVSM--DQKVGSKRKDCVNNGGRREPHLLKEHVLAERKRR 141
Query 86 DKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANY 137
K+N + L++L+P +K DK TVL A++H+K L+ E
Sbjct 142 QKLNERLIALSALLP----GLKKTDKATVLEDAIKHLKQLQERVKKLEEERV 189
>sp|Q9LEZ3|BIM1_ARATH Transcription factor BIM1 OS=Arabidopsis
thaliana OX=3702 GN=BIM1 PE=1 SV=2
Length=529
Score = 56.1 bits (133), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 44/98 (45%), Gaps = 6/98 (6%)
Query 38 KRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELAS 97
K++ SST +D + + + ++ R HS E+RRR K+N L
Sbjct 245 KKESSSTSQSHRVDL---RVKADVRGSPNDQKLNTPRSKHSATEQRRRSKINDRFQMLRQ 301
Query 98 LVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA 135
L+P + K DK + L +++++ L+ + Y +
Sbjct 302 LIPNSDQ---KRDKASFLLEVIEYIQFLQEKADKYVTS 336
>sp|Q01371|WC1_NEUCR White collar 1 protein OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 /
FGSC 987) OX=367110 GN=wc-1 PE=1 SV=2
Length=1167
Score = 56.1 bits (133), Expect = 8e-07, Method: Composition-based stats.
Identities = 45/296 (15%), Positives = 104/296 (35%), Gaps = 29/296 (10%)
Query 159 LFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLF---------------DYLHPKDIAK 203
+ V + I++VS++ + YS+++++G++ +++ +
Sbjct 395 VCDVTLNDCPIIYVSDNFQNLTGYSRHEIVGRNCRFLQAPDGNVEAGTKREFVENNAVYT 454
Query 204 VKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDK 263
+K+ ++ + + K G P +T P + R F +
Sbjct 455 LKKTIAEGQEIQQSLINYRKGGKPFLNLLTMIPIPWDTEEIRYFI-------GFQIDLVE 507
Query 264 DFPSTCSKKKADRKSFCTIHS-TGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGR--- 319
+ ++ HS G PPT+ L+ + ++S L+
Sbjct 508 CPDAIIGQEGNGPMQVNYTHSDIGQYIWTPPTQKQLEPADGQTLGVDDVSTLLQQCNSKG 567
Query 320 LHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQ 379
+ S Q + + + + V ++ G F+++ +L Y +L+GTS H
Sbjct 568 VASDWHKQSWDKMLLENADDVVHVLSLKGLFLYLSPACKKVLEYDASDLVGTSLSSICHP 627
Query 380 DDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIV 435
DI + + Q + ++ + K+ + S F N K + I+
Sbjct 628 SDIVPVTRE-LKEAQQHTPVNI-VFRIRRKNSGYTWFESHGTLF-NEQGKGRKCII 680
Score = 49.9 bits (117), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/248 (12%), Positives = 83/248 (33%), Gaps = 6/248 (2%)
Query 252 KCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEP-DNEGCN 310
+ +++ + + ++ ++ + + +G
Sbjct 616 LVGTSLSSICHPSDIVPVTRELKEAQQHTPVNIVFRIRRKNSGYTWFESHGTLFNEQGKG 675
Query 311 LSCLVAIGRLHSHVVPQPVNGEIR--VKSMEYVSRHAIDGKFVFVDQRATAILAYLPQEL 368
C++ +GR + E+ + E ++ + G F+FV ++L LP+ L
Sbjct 676 RKCIILVGRKRPVFALHRKDLELNGGIGDSEIWTKVSTSGMFLFVSSNVRSLLDLLPENL 735
Query 369 LGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWT 428
GTS + ++ + + KI + ++ + K G + + ++
Sbjct 736 QGTSMQDLMRKESRAEFGRTIEKA--RKGKIASCKHEVQNKRGQVLQAYTTFYPGDGGEG 793
Query 429 KEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIP-GG 487
+ ++++ ++ A+ T SP + G ++ + G+ G
Sbjct 794 QRPTFLLAQTKLLKASSRTLAPATVTVKNMSPGGVPLSPMKGIQTDSDSNTLMGGMSKSG 853
Query 488 TRAGAGKI 495
+ G +
Sbjct 854 SSDSTGAM 861
Score = 44.9 bits (104), Expect = 0.002, Method: Composition-based stats.
Identities = 27/162 (17%), Positives = 55/162 (34%), Gaps = 6/162 (4%)
Query 125 LRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQ 184
L+ + +++ ++L AD + V+ G L++S + K+L Y
Sbjct 560 LQQCNSKGVASDWH-----KQSWDKMLLENADDVVHVLSLK-GLFLYLSPACKKVLEYDA 613
Query 185 NDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCSGAR 244
+DL+G SL HP DI V +L + ++ L +
Sbjct 614 SDLVGTSLSSICHPSDIVPVTRELKEAQQHTPVNIVFRIRRKNSGYTWFESHGTLFNEQG 673
Query 245 RSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTG 286
+ C + R + D + + + ++G
Sbjct 674 KGRKCIILVGRKRPVFALHRKDLELNGGIGDSEIWTKVSTSG 715
>sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thaliana
OX=3702 GN=BPE PE=2 SV=1
Length=343
Score = 55.3 bits (131), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 65/176 (37%), Gaps = 30/176 (17%)
Query 26 SSLGTSGVDCNRKRKGSSTD-YQESMDTDKDDPHGRLEYTEHQG------RIKNAREAHS 78
S++G S + R++ D E+ + + + + R A ++HS
Sbjct 89 STIGASEGENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHS 148
Query 79 QIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYK 138
E+ RR+K++ + L LVP CN + K VL + ++++L+
Sbjct 149 LAERARREKISERMKILQDLVPGCNKVIG---KALVLDEIINYIQSLQRQ---------- 195
Query 139 PTFLSDDELKHLILRAADGFL----FVVGCDRGKILFVSESVFKILNYSQNDLIGQ 190
E + L A + + V IL + S+F I Q + +
Sbjct 196 ------VEFLSMKLEAVNSRMNPGIEVFPPKEVMILMIINSIFSIFFTKQYMFLSR 245
>sp|Q84LH8|PIF5_ARATH Transcription factor PIF5 OS=Arabidopsis
thaliana OX=3702 GN=PIF5 PE=1 SV=1
Length=444
Score = 55.7 bits (132), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/112 (27%), Positives = 50/112 (45%), Gaps = 12/112 (11%)
Query 27 SLGTSGVDCNRKRKGSSTDYQESMD--------TDKDDPHGRLEYTEHQGRIKNAREAHS 78
++ + V +RKRK QES+ TD + R A E H+
Sbjct 203 TVSGTSVTIDRKRKHVMDADQESVSQSDIGLTSTDDQTMGNKSSQRSGSTRRSRAAEVHN 262
Query 79 QIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
E+RRRD++N + L L+P C + DK ++L A+ ++K+L+
Sbjct 263 LSERRRRDRINERMKALQELIPHC----SRTDKASILDEAIDYLKSLQMQLQ 310
>sp|A3KNA7|SRBP2_DANRE Sterol regulatory element-binding protein
2 OS=Danio rerio OX=7955 GN=srebf2 PE=1 SV=1
Length=1099
Score = 56.1 bits (133), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
+ R H+ IEKR R +N I EL LV K+ K VLR A+ ++K L+
Sbjct 317 KEGERRTTHNIIEKRYRSSINDKILELRDLV---LGNDAKMHKSGVLRKAIDYIKYLQQV 373
Query 129 TNPYTEANYKPTFLS 143
+ + N +
Sbjct 374 NHKLRQENLTLKMAN 388
>sp|A0A3Q7HRZ6|MYC2_SOLLC Transcription factor MYC2 OS=Solanum
lycopersicum OX=4081 GN=MYC2 PE=1 SV=1
Length=689
Score = 55.7 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/122 (19%), Positives = 48/122 (39%), Gaps = 13/122 (11%)
Query 19 GPTDLLSSSLGTSGVDCNRKRKGSSTD-YQESMDTDKDDPHGRLEYTEHQGRIKNARE-- 75
G +S ++ S + G ++ K+ R+ E + R + +
Sbjct 447 GMLSFVSGTVLPSSGMKSGGGGGEDSEHSDLEASVVKEADSSRVVEPEKRPRKRGRKPAN 506
Query 76 ------AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGAT 129
H + E++RR+K+N L ++VP K+DK ++L A+ ++ L+
Sbjct 507 GREEPLNHVEAERQRREKLNQRFYALRAVVP----NVSKMDKASLLGDAISYINELKSKL 562
Query 130 NP 131
Sbjct 563 QN 564
>sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis
thaliana OX=3702 GN=BHLH127 PE=2 SV=1
Length=307
Score = 54.1 bits (128), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/78 (26%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query 58 HGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRM 117
+ A E H+ E+RRR+K+N + L L+P CN K K+++L
Sbjct 136 GTEEARGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCN----KSTKVSMLED 191
Query 118 AVQHMKTLRGATNPYTEA 135
++++K+L N +
Sbjct 192 VIEYVKSLEMQINQFMPH 209
>sp|Q9LTS4|BH041_ARATH Putative transcription factor bHLH041 OS=Arabidopsis
thaliana OX=3702 GN=BHLH41 PE=3 SV=1
Length=466
Score = 54.9 bits (130), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ + H E++RR+K+N L SL+P K DK +VL +A + + +
Sbjct 278 RYTSGPSATQLQHMISERKRREKLNESFQALRSLLPPG----TKKDKASVLSIAREQLSS 333
Query 125 LRGATNPYTEANYK 138
L+G + E N +
Sbjct 334 LQGEISKLLERNRE 347
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis
thaliana OX=3702 GN=GL3 PE=1 SV=1
Length=637
Score = 55.3 bits (131), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 39/85 (46%), Gaps = 6/85 (7%)
Query 51 DTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLD 110
D + +L + R + H+ +EK+RR+K+N L ++P+ N K+D
Sbjct 418 DVPRVHQKEKLMLDSPEARDETG--NHAVLEKKRREKLNERFMTLRKIIPSIN----KID 471
Query 111 KLTVLRMAVQHMKTLRGATNPYTEA 135
K+++L +++++ L
Sbjct 472 KVSILDDTIEYLQELERRVQELESC 496
>sp|Q39204|MYC2_ARATH Transcription factor MYC2 OS=Arabidopsis
thaliana OX=3702 GN=MYC2 PE=1 SV=2
Length=623
Score = 54.9 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/122 (23%), Positives = 47/122 (39%), Gaps = 22/122 (18%)
Query 24 LSSSLGTSGVDCNRKRKG--------SSTDYQESMDTDKDDPHGRLEYTEHQGRIKNA-- 73
SS G + + RKR S D D ++ + R K
Sbjct 382 PSSYSGQTQFENKRKRSMVLNEDKVLSFGDKTAGESDHSDLEASVVKEVAVEKRPKKRGR 441
Query 74 -----RE---AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
RE H + E++RR+K+N L ++VP K+DK ++L A+ ++ L
Sbjct 442 KPANGREEPLNHVEAERQRREKLNQRFYALRAVVP----NVSKMDKASLLGDAIAYINEL 497
Query 126 RG 127
+
Sbjct 498 KS 499
>sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis
thaliana OX=3702 GN=BHLH77 PE=1 SV=1
Length=371
Score = 54.5 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/152 (22%), Positives = 56/152 (37%), Gaps = 26/152 (17%)
Query 19 GPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDT-------------------DKDDPHG 59
G SSSL S + + GS + D D P
Sbjct 125 GKESPASSSLTASNSKVSGENGGSKGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEA 184
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK-------LDKL 112
+Y + R A ++HS E+ RR+K++ + L LVP CN ++ K ++ +
Sbjct 185 PKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYV 244
Query 113 TVLRMAVQHMKTLRGATNPYTEANYKPTFLSD 144
L+ V+ + NP E N + ++
Sbjct 245 QSLQRQVEFLSMKLATVNPRMEFNANASLSTE 276
>sp|G5EEH5|MXL1_CAEEL Max-like protein 1 OS=Caenorhabditis elegans
OX=6239 GN=mxl-1 PE=1 SV=1
Length=124
Score = 51.1 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/106 (20%), Positives = 44/106 (42%), Gaps = 3/106 (3%)
Query 48 ESMDTDKDDPHGRLEYTEHQ---GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNA 104
M +DD G EH ++ARE H+ +E+RRRD + L +VP N
Sbjct 2 SDMSDLEDDQTGHCGSGEHSGPFDPKRHAREQHNALERRRRDNIKDMYTSLREVVPDANG 61
Query 105 MSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHL 150
+ + +L+ A++ ++ + + + + + + +
Sbjct 62 ERVQASRAVILKKAIESIEKGQSDSATLSVDVAEQESKNAKLREEI 107
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis
thaliana OX=3702 GN=BHLH2 PE=1 SV=1
Length=596
Score = 54.9 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 4/60 (7%)
Query 76 AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA 135
H+ EK+RR+K+N L S++P+ K+DK+++L +++++ L+
Sbjct 405 NHALSEKKRREKLNERFMTLRSIIPSI----SKIDKVSILDDTIEYLQDLQKRVQELESC 460
>sp|Q9FIP9|MYC3_ARATH Transcription factor MYC3 OS=Arabidopsis
thaliana OX=3702 GN=MYC3 PE=1 SV=1
Length=592
Score = 54.9 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 46/121 (38%), Gaps = 14/121 (12%)
Query 21 TDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNA------- 73
T + S G+ S+ + + D + + + + +
Sbjct 350 TSVSKGSNNDEGMLSFSTVVRSAANDSDHSDLEASVVKEAIVVEPPEKKPRKRGRKPANG 409
Query 74 RE---AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
RE H + E++RR+K+N L ++VP K+DK ++L A+ ++ L+
Sbjct 410 REEPLNHVEAERQRREKLNQRFYSLRAVVP----NVSKMDKASLLGDAISYINELKSKLQ 465
Query 131 P 131
Sbjct 466 Q 466
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis
thaliana OX=3702 GN=BHLH3 PE=1 SV=1
Length=467
Score = 54.5 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 48/122 (39%), Gaps = 9/122 (7%)
Query 17 SPGPTDLLSSSLGTSGVDC---NRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNA 73
SP D SL + V + + G E++ + + GR +
Sbjct 260 SPKTEDDTGFSLESYEVQAIGGSNQVYGYEQGKDETLYLTDEQKPRKRGRKPANGREEAL 319
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
H + E++RR+K+N L ++VP K+DK ++L A+ ++ ++ Y
Sbjct 320 --NHVEAERQRREKLNQRFYALRAVVP----NISKMDKASLLADAITYITDMQKKIRVYE 373
Query 134 EA 135
Sbjct 374 TE 375
>sp|Q9D489|SOLH2_MOUSE Spermatogenesis- and oogenesis-specific
basic helix-loop-helix-containing protein 2 OS=Mus musculus
OX=10090 GN=Sohlh2 PE=1 SV=2
Length=467
Score = 54.5 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query 57 PHGRLEYTEHQGRIKNAREA---HSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT 113
RL + +++A HS EK RR+++ S ++L +L+P RK D +
Sbjct 182 NDARLGLKAPLSSLDKSKQASFLHSTKEKLRRERIKSCCEQLRTLLPYVKG--RKSDVAS 239
Query 114 VLRMAVQHMKTLRGATNPYTEANYKPTFLSD 144
V+ V ++K +R + +P A ++
Sbjct 240 VIEATVDYVKQVRESLSPAIMAQVTEAIQNN 270
>sp|Q9HCC6|HES4_HUMAN Transcription factor HES-4 OS=Homo sapiens
OX=9606 GN=HES4 PE=1 SV=1
Length=221
Score = 52.6 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 10/112 (9%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQI----EKRRRDKMNSFIDELASLVPTC----NAMSRK 108
+ + ++A E EKRRR ++N + +L +L+ ++ K
Sbjct 15 AGAPASASRTPDKPRSAAEHRKSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSK 74
Query 109 LDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELK-HLILRAADGFL 159
L+K +L M V+H+++LR + P L H L + FL
Sbjct 75 LEKADILEMTVRHLRSLR-RVQVTAALSADPAVLGKYRAGFHECLAEVNRFL 125
>sp|A3BV95|BCL1_ORYSJ Basic helix-loop-helix protein 80 OS=Oryza
sativa subsp. japonica OX=39947 GN=BCL1 PE=1 SV=1
Length=291
Score = 53.4 bits (126), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 46/105 (44%), Gaps = 4/105 (4%)
Query 26 SSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRR 85
S+ + R+G + + +D Y + R A ++HS E+ RR
Sbjct 84 SAHSKDSCKDGKSRRGKKASKEVEEKSTTEDEP-PKGYIHVRARRGQATDSHSLAERVRR 142
Query 86 DKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
++++ + L +LVP C+ ++ K +L + ++++L+
Sbjct 143 ERISERMRMLQALVPGCDKVTG---KALILDEIINYVQSLQNQVE 184
>sp|A2YXI4|BCL1_ORYSI Basic helix-loop-helix protein 80 OS=Oryza
sativa subsp. indica OX=39946 GN=BCL1 PE=3 SV=1
Length=291
Score = 53.4 bits (126), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 46/105 (44%), Gaps = 4/105 (4%)
Query 26 SSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRR 85
S+ + R+G + + +D Y + R A ++HS E+ RR
Sbjct 84 SAHSKDSCKDGKSRRGKKASKEVEEKSTTEDEP-PKGYIHVRARRGQATDSHSLAERVRR 142
Query 86 DKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
++++ + L +LVP C+ ++ K +L + ++++L+
Sbjct 143 ERISERMRMLQALVPGCDKVTG---KALILDEIINYVQSLQNQVE 184
>sp|P07270|PHO4_YEAST Phosphate system positive regulatory protein
PHO4 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) OX=559292 GN=PHO4 PE=1 SV=4
Length=312
Score = 53.4 bits (126), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/64 (27%), Positives = 33/64 (52%), Gaps = 3/64 (5%)
Query 70 IKNAREAHSQIEKRRRDKMNSFIDELASLVPTC---NAMSRKLDKLTVLRMAVQHMKTLR 126
+ RE+H E+ RR+++ + ELASL+P +S K T + A ++++ L+
Sbjct 248 DDDKRESHKHAEQARRNRLAVALHELASLIPAEWKQQNVSAAPSKATTVEAACRYIRHLQ 307
Query 127 GATN 130
+
Sbjct 308 QNVS 311
>sp|Q3MHT3|SOLH2_RAT Spermatogenesis- and oogenesis-specific basic
helix-loop-helix-containing protein 2 OS=Rattus norvegicus
OX=10116 GN=Sohlh2 PE=2 SV=1
Length=462
Score = 53.8 bits (127), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Query 49 SMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK 108
S + D G R K A HS EK RR+++ ++L +L+P RK
Sbjct 177 SELLNNDTGLGLKAPLSSPERNKKASFLHSSKEKLRRERIKFCCEQLRTLLPYVKG--RK 234
Query 109 LDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELK 148
D +V+ V ++K +R + +P A + S+
Sbjct 235 SDVASVIEATVDYVKQVRESLSPAIMAQITESLQSNKRFS 274
>sp|Q0J0G7|BC1_ORYSJ Transcription factor BC1 OS=Oryza sativa
subsp. japonica OX=39947 GN=BC1 PE=1 SV=1
Length=282
Score = 53.0 bits (125), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 59/134 (44%), Gaps = 13/134 (10%)
Query 3 DQRMDISSTISDFMSP-----GPTDLLSSSLGT-SGVDCNRKRKGSSTDYQESMDTDKDD 56
D M+ SS + D SP P + ++SL + + + +++
Sbjct 42 DASMETSSVVLD-TSPQDKKRKPREEDTASLNSAHSKEAKENGRKRGGKKHSRDQMEEEA 100
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
P G + + R A ++HS E+ RR++++ + L +LVP C+ ++ K +L
Sbjct 101 PQGFIHV---RARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTG---KALILD 154
Query 117 MAVQHMKTLRGATN 130
+ ++++L+
Sbjct 155 EIINYVQSLQNQVE 168
>sp|A0A0N7KIY3|BH156_ORYSJ Transcription factor BHLH156 OS=Oryza
sativa subsp. japonica OX=39947 GN=BHLH156 PE=1 SV=1
Length=352
Score = 53.4 bits (126), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/68 (28%), Positives = 32/68 (47%), Gaps = 4/68 (6%)
Query 68 GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
R + R E++RR +M + EL +LVP K+DK +++ AV ++K L+
Sbjct 126 TRKRRDRSKTIVSERKRRVRMKEKLYELRALVP----NITKMDKASIIADAVVYVKDLQA 181
Query 128 ATNPYTEA 135
E
Sbjct 182 HARKLKEE 189
>sp|P35805|MCL1B_XENLA Protein L-Myc-1-B OS=Xenopus laevis OX=8355
GN=mycl1-b PE=2 SV=1
Length=344
Score = 53.4 bits (126), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/126 (21%), Positives = 45/126 (36%), Gaps = 4/126 (3%)
Query 13 SDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKN 72
+ + P P + S V ++ G T E P L
Sbjct 205 AARLPPEPNTMSPQHNFHSTV---KEEPGEVTSPPELQPCSPQMPDSPLASGSSDSEDLA 261
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
R+ H+ +E++RR+ + S L VP+ + ++ K+ VL A + +K L
Sbjct 262 KRKNHNYLERKRRNDLRSRFLALREEVPSLSRSTKTP-KVVVLSKATEFLKGLVIQEQQL 320
Query 133 TEANYK 138
T K
Sbjct 321 TAEKLK 326
>sp|Q9C670|BH076_ARATH Transcription factor bHLH76 OS=Arabidopsis
thaliana OX=3702 GN=BHLH76 PE=1 SV=1
Length=390
Score = 53.4 bits (126), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/252 (16%), Positives = 80/252 (32%), Gaps = 51/252 (20%)
Query 22 DLLSSSLGTSGVDCN---------RKRKGSSTDYQESMDTDKDDPHGR------------ 60
S G C +KRK D +E D + D
Sbjct 152 SQSSGGNGHDDAKCGQTSSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPTSNANKTNSEKQ 211
Query 61 ------LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK------ 108
Y + R A +HS E+ RR+K++ + L LVP C+ ++ K
Sbjct 212 PSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDE 271
Query 109 -LDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRG 167
++ + L+ ++ + A NP + N + D + +A F +
Sbjct 272 IINYVQSLQCQIEFLSMKLSAVNPVLDFNLESLLAKDA-----LQSSAPTFPHNMSMLYP 326
Query 168 KILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLP 227
+ ++S++ + Q ++ SL +K Q + + L+
Sbjct 327 PVSYLSQT-----GFMQPNISSMSLLS-------GGLKRQETHGYESDHHNLVHMNHETG 374
Query 228 VKTDITPGPSRL 239
D + +
Sbjct 375 TAPDHEDTTADM 386
>sp|Q9FE22|HFR1_ARATH Transcription factor HFR1 OS=Arabidopsis
thaliana OX=3702 GN=HFR1 PE=1 SV=1
Length=292
Score = 53.0 bits (125), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/122 (25%), Positives = 53/122 (43%), Gaps = 13/122 (11%)
Query 30 TSGVDCNRKRK--GSSTDYQESMDTDKDDPHGRL--EYTEHQGRIKNARE----AHSQIE 81
S D + K +D++ + ++P R + + RE +
Sbjct 83 HSETDDHHHIKDFSERSDHRFYLRNKHENPKKRRIQVLSSDDESEEFTREVPSVTRKGSK 142
Query 82 KRRRD-KMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPT 140
+RRRD KM++ + +L LVP C+ K DK++VL +++MK L+ + P
Sbjct 143 RRRRDEKMSNKMRKLQQLVPNCH----KTDKVSVLDKTIEYMKNLQLQLQMMSTVGVNPY 198
Query 141 FL 142
FL
Sbjct 199 FL 200
>sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis
thaliana OX=3702 GN=BHLH79 PE=1 SV=1
Length=281
Score = 52.6 bits (124), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/110 (22%), Positives = 44/110 (40%), Gaps = 3/110 (3%)
Query 21 TDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQI 80
L S G + + SS K+ P +Y + R A + HS
Sbjct 108 RKLCGSESGNGDGSMRPEGETSSGGGGSKATEQKNKPEPPKDYIHVRARRGQATDRHSLA 167
Query 81 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
E+ RR+K++ + L ++P CN + K VL + ++++L+
Sbjct 168 ERARREKISEKMTALQDIIPGCNKIIG---KALVLDEIINYIQSLQRQVE 214
>sp|P35428|HES1_MOUSE Transcription factor HES-1 OS=Mus musculus
OX=10090 GN=Hes1 PE=1 SV=1
Length=282
Score = 52.6 bits (124), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/69 (25%), Positives = 38/69 (55%), Gaps = 4/69 (6%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTC----NAMSRKLDKLTVLRMAVQ 120
+ + ++ + + +EKRRR ++N + +L +L+ ++ KL+K +L M V+
Sbjct 27 KPKTASEHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVK 86
Query 121 HMKTLRGAT 129
H++ L+ A
Sbjct 87 HLRNLQRAQ 95
>sp|Q01068|ESM3_DROME Enhancer of split m3 protein OS=Drosophila
melanogaster OX=7227 GN=E(spl)m3-HLH PE=1 SV=1
Length=224
Score = 51.8 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/121 (20%), Positives = 47/121 (39%), Gaps = 15/121 (12%)
Query 81 EKRRRDKMNSFIDELASLVPTCNAM----SRKLDKLTVLRMAVQHMKTLRGATNPYTEAN 136
E++RR ++N +D+L L+ C +L+K +L + V HM+ L+ +
Sbjct 20 ERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDHMRKLKQRGGLSLQGV 79
Query 137 YKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKI-LNYSQNDLIGQSLFDY 195
S V G + ++ + ++ L Q D IG+ + +
Sbjct 80 V-AGVGSPPTSTST--------AHVESFRSGYV-HAADQITQVLLQTQQTDEIGRKIMKF 129
Query 196 L 196
L
Sbjct 130 L 130
>sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis
thaliana OX=3702 GN=BHLH74 PE=1 SV=1
Length=366
Score = 52.6 bits (124), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query 36 NRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAR----EAHSQIEKRRRDKMNSF 91
N + + + Q +K+ E+ ++ R +HS E+ RR+K++
Sbjct 172 NDQSQKKHKNDQSKETVNKESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISER 231
Query 92 IDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
+ L LVP CN ++ K +L + ++++L+
Sbjct 232 MRLLQELVPGCNKITG---KAVMLDEIINYVQSLQQQVE 267
>sp|Q8W2F3|PIF4_ARATH Transcription factor PIF4 OS=Arabidopsis
thaliana OX=3702 GN=PIF4 PE=1 SV=1
Length=430
Score = 53.0 bits (125), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/109 (25%), Positives = 49/109 (45%), Gaps = 7/109 (6%)
Query 22 DLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIE 81
D+ + G ++++ + TD S+ D + R A E H+ E
Sbjct 210 DIKEMASGRCITTDRKRKRINHTDESVSLS---DAIGNKSNQRSGSNRRSRAAEVHNLSE 266
Query 82 KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
+RRRD++N + L L+P C K DK ++L A+ ++K+L+
Sbjct 267 RRRRDRINERMKALQELIPHC----SKTDKASILDEAIDYLKSLQLQLQ 311
>sp|P57100|HAND1_RABIT Heart- and neural crest derivatives-expressed
protein 1 OS=Oryctolagus cuniculus OX=9986 GN=HAND1 PE=2
SV=1
Length=215
Score = 51.4 bits (121), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/72 (32%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query 51 DTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLD 110
DT GRLE GR+ + + + E+RR + +NS EL +P A + KL
Sbjct 75 DTRPGQSPGRLEALG--GRLGRRKGSGPKKERRRTESINSAFAELRECIPNVPADT-KLS 131
Query 111 KLTVLRMAVQHM 122
K+ LR+A ++
Sbjct 132 KIKTLRLATSYI 143
>sp|O57337|HES1_CHICK Transcription factor HES-1 OS=Gallus gallus
OX=9031 GN=HES1 PE=2 SV=1
Length=290
Score = 52.2 bits (123), Expect = 5e-06, Method: Composition-based stats.
Identities = 17/69 (25%), Positives = 37/69 (54%), Gaps = 4/69 (6%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTC----NAMSRKLDKLTVLRMAVQ 120
+ + ++ + + +EKRRR ++N + +L L+ ++ KL+K +L M V+
Sbjct 28 KPRSASEHRKSSKPIMEKRRRARINESLGQLKMLILDALKKDSSRHSKLEKADILEMTVK 87
Query 121 HMKTLRGAT 129
H++ L+ A
Sbjct 88 HLRNLQRAQ 96
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis
thaliana OX=3702 GN=BHLH19 PE=1 SV=1
Length=295
Score = 52.2 bits (123), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/102 (25%), Positives = 42/102 (41%), Gaps = 5/102 (5%)
Query 34 DCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFID 93
D + S + MD R + A+E H E++RR+K++
Sbjct 78 DFSSNVISSPAAEEIIMDKLVGRGTKRKTCSHGTRSPVLAKE-HVLAERKRREKLSEKFI 136
Query 94 ELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA 135
L++L+P +K DK+T+L A+ MK L+ E
Sbjct 137 ALSALLP----GLKKADKVTILDDAISRMKQLQEQLRTLKEE 174
>sp|P78714|WC2_NEUCR White collar 2 protein OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 /
FGSC 987) OX=367110 GN=wc-2 PE=1 SV=1
Length=530
Score = 53.0 bits (125), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/96 (18%), Positives = 34/96 (35%), Gaps = 8/96 (8%)
Query 345 AIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCY 404
+G+ V + Y P E++ + H DD+G + + T ++ Y
Sbjct 181 DANGRIKHVSPSVEPLTGYKPPEIIDLFLRDLIHPDDVGVFTAELNEAIATGSQLRL-FY 239
Query 405 KFKIKDGSFITLRS-------RWFSFMNPWTKEVEY 433
+F+ KDG++ + NP +
Sbjct 240 RFRKKDGNWTIFETVGHAHIAAAKFAPNPQNQSPFC 275
Score = 42.2 bits (97), Expect = 0.015, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 11/89 (12%)
Query 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
T N+ + + + IL A G+I VS SV + Y ++I
Sbjct 157 TEFTKRRNWPAKVVEELQDWEHILDA-----------NGRIKHVSPSVEPLTGYKPPEII 205
Query 189 GQSLFDYLHPKDIAKVKEQLSSSDTAPRE 217
L D +HP D+ +L+ + +
Sbjct 206 DLFLRDLIHPDDVGVFTAELNEAIATGSQ 234
>sp|Q84T08|BH089_ORYSJ Transcription factor BHLH089 OS=Oryza sativa
subsp. japonica OX=39947 GN=BHLH089 PE=1 SV=1
Length=265
Score = 51.8 bits (122), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/134 (19%), Positives = 48/134 (36%), Gaps = 9/134 (7%)
Query 3 DQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLE 62
D +S++ TD + S + + + + D +
Sbjct 67 DSSRIVSTSGGGGGGQDLTDSEAKRFKASKSSGDNSSLRTEAETDSRNASKSGDQNPPPP 126
Query 63 YTEHQG------RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
Q R A ++HS E+ RR+K++ + L LVP CN + K +VL
Sbjct 127 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG---KASVLD 183
Query 117 MAVQHMKTLRGATN 130
+ +++ L+
Sbjct 184 EIINYIQALQRQVE 197
>sp|Q0VCE2|HAND1_BOVIN Heart- and neural crest derivatives-expressed
protein 1 OS=Bos taurus OX=9913 GN=HAND1 PE=2 SV=1
Length=218
Score = 51.1 bits (120), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 46/107 (43%), Gaps = 10/107 (9%)
Query 51 DTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLD 110
D GRLE GR+ + + + E+RR + +NS EL +P A + KL
Sbjct 78 DARPGQSPGRLEALG--GRLGRRKGSGPKKERRRTESINSAFAELRECIPNVPADT-KLS 134
Query 111 KLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADG 157
K+ LR+A ++ L +A F ++ L+ ADG
Sbjct 135 KIKTLRLATSYIAYLMDVLAKDAQAGDPEAFKAE-------LKKADG 174
>sp|O96004|HAND1_HUMAN Heart- and neural crest derivatives-expressed
protein 1 OS=Homo sapiens OX=9606 GN=HAND1 PE=1 SV=1
Length=215
Score = 51.1 bits (120), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 46/107 (43%), Gaps = 10/107 (9%)
Query 51 DTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLD 110
D GRLE GR+ + + + E+RR + +NS EL +P A + KL
Sbjct 75 DARPGQSPGRLEALG--GRLGRRKGSGPKKERRRTESINSAFAELRECIPNVPADT-KLS 131
Query 111 KLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADG 157
K+ LR+A ++ L ++ F ++ L+ ADG
Sbjct 132 KIKTLRLATSYIAYLMDVLAKDAQSGDPEAFKAE-------LKKADG 171
>sp|P13097|ESM7_DROME Enhancer of split m7 protein OS=Drosophila
melanogaster OX=7227 GN=E(spl)m7-HLH PE=1 SV=1
Length=186
Score = 50.7 bits (119), Expect = 7e-06, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query 81 EKRRRDKMNSFIDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGA 128
E++RR ++N +DEL L+ C K +K +L + VQH++ L+ +
Sbjct 22 ERKRRARINKCLDELKDLMAECVAQTGDAKFEKADILEVTVQHLRKLKES 71
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis
thaliana OX=3702 GN=BHLH18 PE=1 SV=1
Length=305
Score = 51.8 bits (122), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/80 (28%), Positives = 42/80 (53%), Gaps = 4/80 (5%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMK 123
+ R ++ + H E++RR+K+ L++L+P +K+DK +VL A++H+K
Sbjct 114 AQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIP----GLKKMDKASVLGDAIKHIK 169
Query 124 TLRGATNPYTEANYKPTFLS 143
L+ + Y E + T S
Sbjct 170 YLQESVKEYEEQKKEKTMES 189
>sp|Q28DB3|MAD3_XENTR Max dimerization protein 3 OS=Xenopus tropicalis
OX=8364 GN=mxd3 PE=2 SV=1
Length=200
Score = 50.7 bits (119), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/93 (27%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query 37 RKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELA 96
R+ + + Y + D P GR + N R H+++EK RR ++ +++L
Sbjct 20 RREREAEHGYASILPCDPATP-GRRKRQRTNSNPDNVRSVHNELEKHRRAQLRRCLEQLK 78
Query 97 SLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGAT 129
VP SR L++L A QH+K L
Sbjct 79 QQVPLSMENSRHT-TLSLLHRAKQHIKKLEDQE 110
>sp|Q14469|HES1_HUMAN Transcription factor HES-1 OS=Homo sapiens
OX=9606 GN=HES1 PE=1 SV=1
Length=280
Score = 51.8 bits (122), Expect = 8e-06, Method: Composition-based stats.
Identities = 17/69 (25%), Positives = 38/69 (55%), Gaps = 4/69 (6%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTC----NAMSRKLDKLTVLRMAVQ 120
+ + ++ + + +EKRRR ++N + +L +L+ ++ KL+K +L M V+
Sbjct 27 KPKTASEHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVK 86
Query 121 HMKTLRGAT 129
H++ L+ A
Sbjct 87 HLRNLQRAQ 95
>sp|Q93W88|BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis
thaliana OX=3702 GN=BHLH137 PE=1 SV=1
Length=286
Score = 51.8 bits (122), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 60/146 (41%), Gaps = 14/146 (10%)
Query 23 LLSSSLGTSGVDCNRKRKGSSTD-YQESMDTDKDDPHGRLEYTEH-------QGRIKNAR 74
L + R RK +++ +E ++ K R E + R A
Sbjct 85 LSHGPSAITNTGKTRGRKARNSNNSKEGVEGRKSKKQKRGSKEEPPTDYIHVRARRGQAT 144
Query 75 EAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN--PY 132
++HS E+ RR+K++ + L +LVP C+ ++ K +L + +++TL+
Sbjct 145 DSHSLAERVRREKISERMRTLQNLVPGCDKVTG---KALMLDEIINYVQTLQTQVEFLSM 201
Query 133 TEANYKPTFLS-DDELKHLILRAADG 157
+ P +L LIL++ G
Sbjct 202 KLTSISPVVYDFGSDLDGLILQSEMG 227
>sp|A0A3Q7HES4|MTB2_SOLLC Transcription factor MTB2 OS=Solanum
lycopersicum OX=4081 GN=MTB2 PE=2 SV=1
Length=579
Score = 52.6 bits (124), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 14/109 (13%)
Query 18 PGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAH 77
P + + + S V+ + K K + D + + H
Sbjct 384 PVVSPVPTVESEHSDVEVSCKEKHAG----------PADERRPRKRGRKPANGREEPLNH 433
Query 78 SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
+ E++RR+K+N L ++VP K+DK ++L A+ H+ ++
Sbjct 434 VEAERQRREKLNQRFYALRAVVP----NISKMDKASLLGDAIAHITDMQ 478
>sp|Q04666|HES1_RAT Transcription factor HES-1 OS=Rattus norvegicus
OX=10116 GN=Hes1 PE=1 SV=1
Length=281
Score = 51.4 bits (121), Expect = 8e-06, Method: Composition-based stats.
Identities = 17/69 (25%), Positives = 38/69 (55%), Gaps = 4/69 (6%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTC----NAMSRKLDKLTVLRMAVQ 120
+ + ++ + + +EKRRR ++N + +L +L+ ++ KL+K +L M V+
Sbjct 27 KPKTASEHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVK 86
Query 121 HMKTLRGAT 129
H++ L+ A
Sbjct 87 HLRNLQRAQ 95
>sp|O73615|HAND1_XENLA Heart- and neural crest derivatives-expressed
protein 1 OS=Xenopus laevis OX=8355 GN=hand1 PE=2 SV=1
Length=197
Score = 50.7 bits (119), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/93 (25%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Query 52 TDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDK 111
GR+E G++ + A + E+RR + +NS EL +P A + KL K
Sbjct 62 VGPSQTSGRIENLG--GKLGRRKGAPPKKERRRTESINSAFAELRECIPNVPADT-KLSK 118
Query 112 LTVLRMAVQHMKTLRGATNPYTEANYKPTFLSD 144
+ LR+A ++ L +E F ++
Sbjct 119 IKTLRLATSYIGYLMDVLAKDSEPGGTEAFKAE 151
>sp|Q0VH33|MAD3_XENLA Max dimerization protein 3 OS=Xenopus laevis
OX=8355 GN=mxd3 PE=2 SV=1
Length=200
Score = 50.7 bits (119), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/93 (27%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query 37 RKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELA 96
R+ + + Y + D P GR + N R H+++EK RR ++ +++L
Sbjct 20 RREREAEHGYASILPCDPATP-GRRKRQRTNSNPDNVRSVHNELEKHRRAQLRRCLEQLK 78
Query 97 SLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGAT 129
VP SR L++L A QH+K L
Sbjct 79 QQVPLSMENSRHT-TLSLLHRAKQHIKKLEDQE 110
>sp|Q3ZBG4|HES1_BOVIN Transcription factor HES-1 OS=Bos taurus
OX=9913 GN=HES1 PE=2 SV=1
Length=280
Score = 51.4 bits (121), Expect = 9e-06, Method: Composition-based stats.
Identities = 17/69 (25%), Positives = 38/69 (55%), Gaps = 4/69 (6%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTC----NAMSRKLDKLTVLRMAVQ 120
+ + ++ + + +EKRRR ++N + +L +L+ ++ KL+K +L M V+
Sbjct 27 KPKTASEHRKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVK 86
Query 121 HMKTLRGAT 129
H++ L+ A
Sbjct 87 HLRNLQRAQ 95
>sp|Q9LET0|BH107_ARATH Putative transcription factor bHLH107 OS=Arabidopsis
thaliana OX=3702 GN=BHLH107 PE=3 SV=1
Length=230
Score = 51.1 bits (120), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/72 (28%), Positives = 39/72 (54%), Gaps = 4/72 (6%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMK 123
T ++ + + H + E++RR ++NS +++L L+ + + K DK T+L VQ +K
Sbjct 36 TVYEDKALASLRNHKEAERKRRARINSHLNKLRKLL----SCNSKTDKSTLLAKVVQRVK 91
Query 124 TLRGATNPYTEA 135
L+ T T+
Sbjct 92 ELKQQTLEITDE 103
>sp|Q9LN95|BH055_ARATH Transcription factor bHLH55 OS=Arabidopsis
thaliana OX=3702 GN=BHLH55 PE=2 SV=1
Length=257
Score = 51.1 bits (120), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 51/137 (37%), Gaps = 22/137 (16%)
Query 3 DQRMDISSTIS-----DFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDP 57
+ +D SS I+ F P P + + S G R+ T S DD
Sbjct 16 ENDLDFSSLITPSTRVSFQEPKPCNPVIHSAGIEN----DGRQNCETTMTLSEIMKGDDE 71
Query 58 HGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRM 117
KN R H ++E++RR + S L L+P+ ++ VL
Sbjct 72 ------------PKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVL-E 118
Query 118 AVQHMKTLRGATNPYTE 134
AV ++K L+ +E
Sbjct 119 AVNYIKDLQKKIKEVSE 135
>sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis
thaliana OX=3702 GN=ILR3 PE=1 SV=1
Length=234
Score = 50.7 bits (119), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/101 (25%), Positives = 47/101 (47%), Gaps = 5/101 (5%)
Query 41 GSSTDYQESMDTDKDDPHGRLE-YTEHQGRIKNAREAHSQI--EKRRRDKMNSFIDELAS 97
G S++ +D + E ++ +GR +++ S+ EK+RRD++N EL +
Sbjct 37 GVSSNSSAGVDGSAGNSEASKEPGSKKRGRCESSSATSSKACREKQRRDRLNDKFMELGA 96
Query 98 LVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYK 138
++ K DK +L AV+ + LRG ++N
Sbjct 97 IL--EPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSS 135
>sp|Q9FKQ6|BH099_ARATH Transcription factor bHLH99 OS=Arabidopsis
thaliana OX=3702 GN=BHLH99 PE=2 SV=1
Length=296
Score = 51.1 bits (120), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 3/76 (4%)
Query 70 IKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGAT 129
+N R H +E+ RR +MN F+ L S++P + D+ +++ + ++K L
Sbjct 97 KENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPN--DQASIIEGTISYLKKLEQRL 154
Query 130 NPYTEANYKPTFLSDD 145
EA K T L+
Sbjct 155 QSL-EAQLKATKLNQS 169
>sp|Q28555|HAND1_SHEEP Heart- and neural crest derivatives-expressed
protein 1 OS=Ovis aries OX=9940 GN=HAND1 PE=2 SV=1
Length=204
Score = 49.9 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 46/107 (43%), Gaps = 10/107 (9%)
Query 51 DTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLD 110
D GRLE GR+ + + + E+RR + +NS EL +P A + KL
Sbjct 81 DARPGQSPGRLEALG--GRLGRRKGSGPKKERRRTESINSAFAELRECIPNVPADT-KLS 137
Query 111 KLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADG 157
K+ LR+A ++ L +A F ++ L+ ADG
Sbjct 138 KIKTLRLATSYIAYLMDVLAKDAQAGDPEAFKAE-------LKKADG 177
>sp|Q00P32|HES2_XENLA Transcription factor HES-2 OS=Xenopus laevis
OX=8355 GN=hes2 PE=1 SV=2
Length=191
Score = 49.5 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 39/93 (42%), Gaps = 4/93 (4%)
Query 53 DKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASL-VPTCNAMS---RK 108
D + +Q + + +EKRRR ++N +++L +L +P + K
Sbjct 9 DSMHNYQPKPGKRNQEASELRKTLKPLMEKRRRARINESLNQLKTLILPLIGKDNSRYSK 68
Query 109 LDKLTVLRMAVQHMKTLRGATNPYTEANYKPTF 141
L+K +L M V+ ++ + YK +
Sbjct 69 LEKADILEMTVRFLRDIPPVQAQNQADRYKEGY 101
>sp|P97832|HAND1_RAT Heart- and neural crest derivatives-expressed
protein 1 OS=Rattus norvegicus OX=10116 GN=Hand1 PE=2 SV=2
Length=216
Score = 49.9 bits (117), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/72 (31%), Positives = 35/72 (49%), Gaps = 3/72 (4%)
Query 51 DTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLD 110
D GRLE GR+ + + + E+RR + +NS EL +P A + KL
Sbjct 75 DARPSQSPGRLEALG--GRLPRRKGSGPKKERRRTESINSAFAELRECIPNVPADT-KLS 131
Query 111 KLTVLRMAVQHM 122
K+ LR+A ++
Sbjct 132 KIKTLRLATSYI 143
>sp|Q69WS3|BH094_ORYSJ Transcription factor BHLH094 OS=Oryza sativa
subsp. japonica OX=39947 GN=BHLH094 PE=1 SV=2
Length=256
Score = 50.3 bits (118), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 11/126 (9%)
Query 6 MDISSTISDFMSPGPTDLLSSSLGTS-GVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYT 64
D + + + P + + SL T G D K + + +D H R
Sbjct 74 QDSDAPEAKRLKPMKSSDKNDSLRTEAGTDSGNSSKAADKNATPPEPPKQDYIHVR---- 129
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
R A ++HS E+ RR+K++ + L LVP CN + K +VL + ++++
Sbjct 130 ---ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG---KASVLDEIINYIQS 183
Query 125 LRGATN 130
L+
Sbjct 184 LQHQVE 189
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis
thaliana OX=3702 GN=BHLH25 PE=2 SV=2
Length=328
Score = 51.1 bits (120), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/84 (29%), Positives = 40/84 (48%), Gaps = 6/84 (7%)
Query 54 KDDPHGRLEYTEHQ--GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDK 111
K D R Q R ++ + H E++RR+K+ L++LVP +K+DK
Sbjct 128 KSDEFNRKGTKRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVP----GLKKMDK 183
Query 112 LTVLRMAVQHMKTLRGATNPYTEA 135
+VL A++H+K L+ E
Sbjct 184 ASVLGDALKHIKYLQERVGELEEQ 207
>sp|P16497|KINA_BACSU Sporulation kinase A OS=Bacillus subtilis
(strain 168) OX=224308 GN=kinA PE=1 SV=2
Length=606
Score = 51.4 bits (121), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/271 (14%), Positives = 81/271 (30%), Gaps = 52/271 (19%)
Query 161 VVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLS--SSDTAPRER 218
V G+I+++S + L Y Q ++IG L +LH +D V+ R
Sbjct 19 AVLASNGRIIYISANSKLHLGYLQGEMIGSFLKTFLHEEDQFLVESYFYNEHHLMPCTFR 78
Query 219 LIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKS 278
I + + R +MK +
Sbjct 79 FIKKDHTIVWVEAAVEIVTTRAERTEREIILKMKVL-------------------EEETG 119
Query 279 FCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSM 338
+++ + P D E +P P+ ++
Sbjct 120 HQSLNCEKH--EIEPASPESTTYITDDYE------------RLVENLPSPLCISVK---- 161
Query 339 EYVSRHAIDGKFVFVDQRATAILAYLPQE-LLGTSCYEYFHQDDIGHLAECHRQVLQTRE 397
GK V+V+ ++L ++ ++G S YE+ ++ + ++ + E
Sbjct 162 ---------GKIVYVNSAMLSMLGAKSKDAIIGKSSYEFIEEEYHDIVKNRIIRMQKGME 212
Query 398 KITTNCYKFKIKDGSFITLRSRW--FSFMNP 426
+K DG+ + L + + N
Sbjct 213 VGMIEQ-TWKRLDGTPVHLEVKASPTVYKNQ 242
Score = 47.6 bits (111), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 48/145 (33%), Gaps = 14/145 (10%)
Query 347 DGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKF 406
+G+ +++ + L YL E++G+ + H++D + + ++F
Sbjct 24 NGRIIYISANSKLHLGYLQGEMIGSFLKTFLHEEDQFLVESYFYNEH----HLMPCTFRF 79
Query 407 KIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLT----ASPHS 462
KD + + + + + I+ V+ G + ASP S
Sbjct 80 IKKDHTIVWVEAAVEIVTTRAERTEREIILKMKVL--EEETGHQSLNCEKHEIEPASPES 137
Query 463 MDSMLPS----GEGGPKRTHPTVPG 483
+ E P +V G
Sbjct 138 TTYITDDYERLVENLPSPLCISVKG 162
Score = 41.0 bits (94), Expect = 0.035, Method: Composition-based stats.
Identities = 17/45 (38%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query 165 DRGKILFVSES-VFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQL 208
GK +F++ES + + DLIG++++D LHP D VKE++
Sbjct 284 HNGKWVFMNESGISLFEAATYEDLIGKNIYDQLHPCDHEDVKERI 328
>sp|Q59RL7|CPH2_CANAL Transcription factor CPH2 OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) OX=237561 GN=CPH2 PE=1
SV=1
Length=853
Score = 51.4 bits (121), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 39/98 (40%), Gaps = 16/98 (16%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT------CNAMS---- 106
+ + + + +H+ IEK+ R +N+ I L VP C+ +S
Sbjct 190 TNTTKKPAKVTKPKSKDKNSHNMIEKKYRTNINTKILALRDAVPALRIAAGCDDVSIADL 249
Query 107 ------RKLDKLTVLRMAVQHMKTLRGATNPYTEANYK 138
KL+K +VL A +++K L + N +
Sbjct 250 EGLTPASKLNKASVLTKATEYIKHLESKNFILKQQNIE 287
>sp|O81900|DYT1_ARATH Transcription factor DYT1 OS=Arabidopsis
thaliana OX=3702 GN=DYT1 PE=2 SV=1
Length=207
Score = 49.5 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 47/103 (46%), Gaps = 8/103 (8%)
Query 53 DKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 112
+ R + T+ + +N + + + E+RRR+K++ + L S VP M+ K
Sbjct 9 EPVRMSRRKQVTKEKEEDENFKSPNLEAERRRREKLHCRLMALRSHVPIVTNMT----KA 64
Query 113 TVLRMAVQHMKTLRGATNPYTEANYK----PTFLSDDELKHLI 151
+++ A+ ++ L+ E ++ P + +++ +I
Sbjct 65 SIVEDAITYIGELQNNVKNLLETFHEMEEAPPEIDEEQTDPMI 107
>sp|Q0JEB7|BH006_ORYSJ Transcription factor BHLH6 OS=Oryza sativa
subsp. japonica OX=39947 GN=BHLH6 PE=1 SV=1
Length=310
Score = 50.3 bits (118), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 30/56 (54%), Gaps = 4/56 (7%)
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA 135
+E+ RR K+N + L S+VP K+DK ++++ A+++++ L+
Sbjct 97 MERDRRRKLNEKLYALRSVVP----NITKMDKASIIKDAIEYIQRLQAEEQQMLRE 148
>sp|Q9LSQ3|LRL3_ARATH Transcription factor LRL3 OS=Arabidopsis
thaliana OX=3702 GN=LRL3 PE=2 SV=1
Length=297
Score = 50.3 bits (118), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/97 (20%), Positives = 37/97 (38%), Gaps = 4/97 (4%)
Query 30 TSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMN 89
+ GS Q + + R A + HS E+ RR+++
Sbjct 63 HHPQESGGPTMGSQEGLQPQGTVSTTSAPVVRQKPRVRARRGQATDPHSIAERLRRERIA 122
Query 90 SFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
+ L LVP + K DK ++L +++++ L+
Sbjct 123 ERMKSLQELVP----NTNKTDKASMLDEIIEYVRFLQ 155
>sp|Q8VZ02|BH048_ARATH Transcription factor bHLH48 OS=Arabidopsis
thaliana OX=3702 GN=BHLH48 PE=2 SV=1
Length=327
Score = 50.3 bits (118), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/142 (20%), Positives = 54/142 (38%), Gaps = 14/142 (10%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
+L Y + R A + HS E+ RR+K+N+ + L LVP C+ + VL +
Sbjct 179 KLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGT---ALVLDEII 235
Query 120 QHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKI 179
H++TL+ + + + I D ++ + G ++ S +
Sbjct 236 NHVQTLQ--------RQVEMLSMRLAAVNPRIDFNLDS---ILASENGSLMDGSFNAESY 284
Query 180 LNYSQNDLIGQSLFDYLHPKDI 201
Q G ++ +D
Sbjct 285 HQLQQWPFDGYHQPEWGREEDH 306
>sp|Q6YUS3|TDR_ORYSJ Transcription factor TDR OS=Oryza sativa
subsp. japonica OX=39947 GN=TDR PE=1 SV=1
Length=552
Score = 50.7 bits (119), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/65 (25%), Positives = 33/65 (51%), Gaps = 4/65 (6%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
K + + + E++RR K+N + +L SLVP K+D+ ++L A+ ++ L+
Sbjct 280 KRQQCKNLEAERKRRKKLNGHLYKLRSLVP----NITKMDRASILGDAIDYIVGLQKQVK 335
Query 131 PYTEA 135
+
Sbjct 336 ELQDE 340
>sp|Q64279|HAND1_MOUSE Heart- and neural crest derivatives-expressed
protein 1 OS=Mus musculus OX=10090 GN=Hand1 PE=1 SV=1
Length=216
Score = 49.1 bits (115), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query 51 DTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLD 110
D GRLE R+ + + + E+RR + +NS EL +P A + KL
Sbjct 75 DARPSQSPGRLEALG--SRLPKRKGSGPKKERRRTESINSAFAELRECIPNVPADT-KLS 131
Query 111 KLTVLRMAVQHM 122
K+ LR+A ++
Sbjct 132 KIKTLRLATSYI 143
>sp|Q5PPM5|HES1_XENTR Transcription factor HES-1 OS=Xenopus tropicalis
OX=8364 GN=hes1 PE=2 SV=1
Length=267
Score = 49.9 bits (117), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query 59 GRLEYTEHQGRIKNAREAHSQI----EKRRRDKMNSFIDELASLVPTC----NAMSRKLD 110
+ + K A E EKRRR ++N + +L +L+ ++ KL+
Sbjct 17 TPASMSNTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLE 76
Query 111 KLTVLRMAVQHMKTLRGAT 129
K +L M V+H++ L+
Sbjct 77 KADILEMTVKHLRNLQRVQ 95
>sp|Q01070|ESMC_DROME Enhancer of split mgamma protein OS=Drosophila
melanogaster OX=7227 GN=E(spl)mgamma-HLH PE=1 SV=1
Length=205
Score = 48.7 bits (114), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/127 (15%), Positives = 50/127 (39%), Gaps = 5/127 (4%)
Query 59 GRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASL----VPTCNAMSRKLDKLTV 114
L+ +E + + +E++RR ++N +DEL L + + +L+K +
Sbjct 2 SSLQMSEMSKTYQYRKVMKPMLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADI 61
Query 115 LRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSE 174
L + V H++ ++ + A+ + + + + A + + G + +
Sbjct 62 LELTVTHLQKMKQ-QRQHKRASGDESLTPAEGFRSGYIHAVNEVSRSLSQLPGMNVSLGT 120
Query 175 SVFKILN 181
+ L
Sbjct 121 QLMTHLG 127
>sp|Q14582|MAD4_HUMAN Max dimerization protein 4 OS=Homo sapiens
OX=9606 GN=MXD4 PE=1 SV=2
Length=209
Score = 49.1 bits (115), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
Query 37 RKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELA 96
R+ + + Y + D D + + + N R +H+++EK RR K+ ++++L
Sbjct 18 RRDREAEHGYASVLPFDGDFAREKTKAAGLVRKAPNNRSSHNELEKHRRAKLRLYLEQLK 77
Query 97 SLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY---TEANYKPTFLSDDELKHLILR 153
LVP +R L++L+ A H+K L E + L+ L ++
Sbjct 78 QLVPLGPDSTRHT-TLSLLKRAKVHIKKLEEQDRRALSIKEQLQQEHRFLKRRLEQLSVQ 136
Query 154 AAD 156
+ +
Sbjct 137 SVE 139
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis
thaliana OX=3702 GN=BHLH28 PE=2 SV=1
Length=511
Score = 50.7 bits (119), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query 76 AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
H + E+ RR+K+N L ++VP K+DK ++L AV ++ L+
Sbjct 343 NHVEAERMRREKLNHRFYALRAVVP----NVSKMDKTSLLEDAVCYINELKSKAENV 395
>sp|Q8S3D5|LRL2_ARATH Transcription factor LRL2 OS=Arabidopsis
thaliana OX=3702 GN=LRL2 PE=2 SV=2
Length=310
Score = 49.9 bits (117), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/134 (18%), Positives = 51/134 (38%), Gaps = 8/134 (6%)
Query 20 PTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAR----E 75
P D L + T + + + +S T G + + +++ R +
Sbjct 80 PNDALFNGFSTGSLPFHLPQGSGGQTQTQSQATASATTGGATAQPQTKPKVRARRGQATD 139
Query 76 AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA 135
HS E+ RR+++ + L LVP N K DK ++L + ++K L+ + +
Sbjct 140 PHSIAERLRRERIAERMKSLQELVPNGN----KTDKASMLDEIIDYVKFLQLQVKVLSMS 195
Query 136 NYKPTFLSDDELKH 149
+ ++
Sbjct 196 RLGGAASASSQISE 209
>sp|Q01664|TFAP4_HUMAN Transcription factor AP-4 OS=Homo sapiens
OX=9606 GN=TFAP4 PE=1 SV=2
Length=338
Score = 49.9 bits (117), Expect = 4e-05, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 2/75 (3%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMK 123
T+ + RE + E+RR +N+ L +L+P + KL K +L+ +++
Sbjct 40 TQRDQERRIRREIANSNERRRMQSINAGFQSLKTLIP--HTDGEKLSKAAILQQTAEYIF 97
Query 124 TLRGATNPYTEANYK 138
+L + N +
Sbjct 98 SLEQEKTRLLQQNTQ 112
>sp|Q9UUD1|SREBP_SCHPO Sterol regulatory element-binding protein
1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
OX=284812 GN=sre1 PE=1 SV=1
Length=900
Score = 50.7 bits (119), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 48/142 (34%), Gaps = 25/142 (18%)
Query 18 PGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAH 77
P + S S+ + S+ G+ K + AH
Sbjct 212 PSAKKIKLSPSSEDSCSIPETLPFSAPKSRGSL----SPSETPDFVAGPGGKPK--KTAH 265
Query 78 SQIEKRRRDKMNSFIDELASLVPTCNA-------------------MSRKLDKLTVLRMA 118
+ IEKR R +N I EL VP+ A +RKL+K T+L A
Sbjct 266 NMIEKRYRTNLNDRICELRDAVPSLRAAAALRCGNSLDDEDLGGLTPARKLNKGTILAKA 325
Query 119 VQHMKTLRGATNPYTEANYKPT 140
++++ L + N + +
Sbjct 326 TEYIRHLEAKNKELQKTNKQLS 347
>sp|Q8AVU4|HES1B_XENLA Transcription factor HES-1-B OS=Xenopus
laevis OX=8355 GN=hes1-b PE=2 SV=1
Length=267
Score = 49.1 bits (115), Expect = 4e-05, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 37/69 (54%), Gaps = 4/69 (6%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTC----NAMSRKLDKLTVLRMAVQ 120
+ + ++ + + +EKRRR ++N + +L +L+ ++ KL+K +L M V+
Sbjct 27 KPKTASEHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVK 86
Query 121 HMKTLRGAT 129
H++ L+
Sbjct 87 HLRNLQRVQ 95
>sp|Q2QQ32|BH133_ORYSJ Transcription factor BHLH133 OS=Oryza sativa
subsp. japonica OX=39947 GN=BHLH133 PE=2 SV=1
Length=198
Score = 48.4 bits (113), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 6/100 (6%)
Query 28 LGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAH-SQIEKRRRD 86
+ KRK D + + T++ + + E+ S K RR
Sbjct 70 VSAEETTIGNKRK-VQMDTENELMTNRSKEVRTKMSVSKACKHSVSAESSQSYYAKNRRQ 128
Query 87 KMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
++N + L L+P K+D T+L A+Q++K L
Sbjct 129 RINERLRILQELIP----NGTKVDISTMLEEAIQYVKFLH 164
>sp|Q8IV76|PASD1_HUMAN Circadian clock protein PASD1 OS=Homo sapiens
OX=9606 GN=PASD1 PE=1 SV=1
Length=773
Score = 50.3 bits (118), Expect = 4e-05, Method: Composition-based stats.
Identities = 44/277 (16%), Positives = 87/277 (31%), Gaps = 40/277 (14%)
Query 124 TLRGATNPYTEA---NYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
R NP + N+ P+F + D + L+ DGF+ + D G I+ V+E++ +L
Sbjct 7 KRRDKVNPKSSQRKLNWIPSFPTYDYFNQVTLQLLDGFMITLSTD-GVIICVAENISSLL 65
Query 181 NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC 240
+ +++G+ L L ++ +V +++ L
Sbjct 66 GHLPAEIVGKKLLSLLPDEEKDEVYQKIILKFPL------------------------LN 101
Query 241 SGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE 300
S F C +K D + + +G S
Sbjct 102 SETHIEFCCHLKRGNVEHGDSSAYENVKFIVNVRDICNEFPVVFSGLFSSHLCADFAACV 161
Query 301 DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRV----KSMEYV--------SRHAIDG 348
E C++ L + V+ E + +V R
Sbjct 162 PQEDRLYLVGNVCILRTQLLQQLYTSKAVSDEAVLTQDSDEEPFVGELSSSQGQRGHTSM 221
Query 349 KFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
K V+V+ A A A + + + + E + + H+
Sbjct 222 KAVYVEPAAAAAAAAISDDQIDIAEVEQYGPQENVHM 258
>sp|P27792|LYL1_MOUSE Protein lyl-1 OS=Mus musculus OX=10090 GN=Lyl1
PE=2 SV=2
Length=278
Score = 49.1 bits (115), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 6/89 (7%)
Query 57 PHGRLEYTE-HQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVL 115
H L+ + HQ + R + E+ R+ +N EL L+PT + RKL K VL
Sbjct 133 SHSELDLADGHQPQKVARRVFTNSRERWRQQHVNGAFAELRKLLPT-HPPDRKLSKNEVL 191
Query 116 RMAVQHM----KTLRGATNPYTEANYKPT 140
R+A++++ + LR T T P
Sbjct 192 RLAMKYIGFLVRLLRDQTAVLTSGPSAPG 220
>sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis
thaliana OX=3702 GN=BHLH80 PE=2 SV=1
Length=259
Score = 49.1 bits (115), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/134 (25%), Positives = 54/134 (40%), Gaps = 13/134 (10%)
Query 13 SDFMSPGPTDLLSSSLGTSGVDCNRKR--KGSSTDYQESMD------TDKDDPHGRLEYT 64
S+F P D LS+++ S +R + SS +E M D + +
Sbjct 118 SNFGIPANYDYLSTNVDISPTKRSRDMETQFSSQLKEEQMSGGISGMMDMNMDKIFEDSV 177
Query 65 EHQGRIKNAREAH--SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
+ R K H S E+ RR +++ I L LVP + + D +L AV+++
Sbjct 178 PCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTAD---MLEEAVEYV 234
Query 123 KTLRGATNPYTEAN 136
K L+ TE
Sbjct 235 KALQSQIQELTEQQ 248
>sp|P35429|HES2_RAT Transcription factor HES-2 OS=Rattus norvegicus
OX=10116 GN=Hes2 PE=2 SV=1
Length=157
Score = 47.6 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query 81 EKRRRDKMNSFIDELASL-VPTCNAMS---RKLDKLTVLRMAVQHMKT 124
EKRRR ++N + +L L +P A + KL+K +L M V+ ++
Sbjct 22 EKRRRARINESLSQLKGLVLPLLGAETSRYSKLEKADILEMTVRFLRE 69
>sp|P14003|HAIR_DROME Protein hairy OS=Drosophila melanogaster
OX=7227 GN=hry PE=1 SV=2
Length=337
Score = 49.5 bits (116), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/63 (29%), Positives = 33/63 (52%), Gaps = 10/63 (16%)
Query 70 IKNAREAHSQIEKRRRDKMNSFIDELASLV-------PTCNAMSRKLDKLTVLRMAVQHM 122
+ R +EKRRR ++N+ ++EL +L+ P + KL+K +L V+H+
Sbjct 29 KSDRRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARH---SKLEKADILEKTVKHL 85
Query 123 KTL 125
+ L
Sbjct 86 QEL 88
>sp|Q9ZVB5|BH100_ARATH Transcription factor bHLH100 OS=Arabidopsis
thaliana OX=3702 GN=BHLH100 PE=1 SV=1
Length=242
Score = 48.7 bits (114), Expect = 5e-05, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 35/93 (38%), Gaps = 1/93 (1%)
Query 50 MDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKL 109
+ ++ T + + H+ E+ RR K+N+ L S +P N KL
Sbjct 39 LTVTHENVSSENNRTLLDNPVVMKKLNHNASERERRKKINTMFSSLRSCLPPTNQTK-KL 97
Query 110 DKLTVLRMAVQHMKTLRGATNPYTEANYKPTFL 142
+ A++++ L+ + + +F
Sbjct 98 SVSATVSQALKYIPELQEQVKKLMKKKEELSFQ 130
>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis
thaliana OX=3702 GN=BHLH84 PE=1 SV=1
Length=328
Score = 49.5 bits (116), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/85 (24%), Positives = 37/85 (44%), Gaps = 4/85 (5%)
Query 53 DKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 112
D +D + + A + S ++RR+++N + L LVP K+D
Sbjct 224 DGEDSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQHLVP----NGTKVDIS 279
Query 113 TVLRMAVQHMKTLRGATNPYTEANY 137
T+L AVQ++K L+ + +
Sbjct 280 TMLEEAVQYVKFLQLQIKLLSSDDL 304
>sp|Q6IRB2|HES1A_XENLA Transcription factor HES-1-A OS=Xenopus
laevis OX=8355 GN=hes1-a PE=1 SV=1
Length=267
Score = 49.1 bits (115), Expect = 5e-05, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 37/69 (54%), Gaps = 4/69 (6%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTC----NAMSRKLDKLTVLRMAVQ 120
+ + ++ + + +EKRRR ++N + +L +L+ ++ KL+K +L M V+
Sbjct 27 KPKTASEHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVK 86
Query 121 HMKTLRGAT 129
H++ L+
Sbjct 87 HLRNLQRVQ 95
>sp|P50538|MAD1_MOUSE Max dimerization protein 1 OS=Mus musculus
OX=10090 GN=Mxd1 PE=1 SV=2
Length=227
Score = 48.7 bits (114), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/105 (22%), Positives = 40/105 (38%), Gaps = 1/105 (1%)
Query 31 SGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNS 90
D +R+ + SM D + + ++R H+++EK RR +
Sbjct 14 EAADYLERREREAEHGYASMLPYSKDRDAFKRRNKPKKNSTSSRSTHNEMEKNRRAHLRL 73
Query 91 FIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA 135
+++L LVP SR L++L A H+K L
Sbjct 74 CLEKLKGLVPLGPESSRHT-TLSLLTKAKLHIKKLEDCDRKAVHQ 117
>sp|P29303|HAIR_DROVI Protein hairy OS=Drosophila virilis OX=7244
GN=hry PE=2 SV=2
Length=379
Score = 49.5 bits (116), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/63 (29%), Positives = 33/63 (52%), Gaps = 10/63 (16%)
Query 70 IKNAREAHSQIEKRRRDKMNSFIDELASLV-------PTCNAMSRKLDKLTVLRMAVQHM 122
+ R +EKRRR ++N+ ++EL +L+ P + KL+K +L V+H+
Sbjct 36 KSDRRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARH---SKLEKADILEKTVKHL 92
Query 123 KTL 125
+ L
Sbjct 93 QEL 95
>sp|Q9NX45|SOLH2_HUMAN Spermatogenesis- and oogenesis-specific
basic helix-loop-helix-containing protein 2 OS=Homo sapiens
OX=9606 GN=SOHLH2 PE=1 SV=2
Length=425
Score = 49.5 bits (116), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 33/68 (49%), Gaps = 2/68 (3%)
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEAN 136
HS EK RR+++ ++L +L+P RK D +VL V ++K +R +P A
Sbjct 206 HSSKEKLRRERIKYCCEQLRTLLPYVKG--RKNDAASVLEATVDYVKYIREKISPAVMAQ 263
Query 137 YKPTFLSD 144
S+
Sbjct 264 ITEALQSN 271
>sp|Q66HH3|LYL1_RAT Protein lyl-1 OS=Rattus norvegicus OX=10116
GN=Lyl1 PE=2 SV=1
Length=278
Score = 49.1 bits (115), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 40/89 (45%), Gaps = 6/89 (7%)
Query 57 PHGRLEYTE-HQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVL 115
HG L+ + HQ + R + E+ R+ +N EL L+PT + RKL K VL
Sbjct 133 SHGELDLVDGHQPQKVARRVFTNSRERWRQQHVNGAFAELRKLLPT-HPPDRKLSKNEVL 191
Query 116 RMAVQHM----KTLRGATNPYTEANYKPT 140
R+A++++ + LR P
Sbjct 192 RLAMKYIGFLVRLLRDQAAVLASGPSAPG 220
>sp|Q9ZPW3|HBI1_ARATH Transcription factor HBI1 OS=Arabidopsis
thaliana OX=3702 GN=HBI1 PE=1 SV=3
Length=337
Score = 49.1 bits (115), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/144 (21%), Positives = 59/144 (41%), Gaps = 9/144 (6%)
Query 33 VDCNRKRKGSSTDYQESMDTDKDDPHG-----RLEYTEHQGRIKNAREAHSQIEKRRRDK 87
+ + K K + + + S DT K+ G +L+Y + R A + HS E+ RR+K
Sbjct 147 TESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAERARREK 206
Query 88 MNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL-RGATNPYTEANYKPTFLSDDE 146
++ + L +VP CN ++ K +L + +++ L R + L
Sbjct 207 ISKKMKYLQDIVPGCNKVTG---KAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELELAV 263
Query 147 LKHLILRAADGFLFVVGCDRGKIL 170
+ + F VV + ++
Sbjct 264 EDVSVKQFQAYFTNVVASKQSIMV 287
>sp|Q90Z12|HES4A_XENLA Transcription factor HES-4-A OS=Xenopus
laevis OX=8355 GN=hes4-a PE=1 SV=2
Length=281
Score = 48.7 bits (114), Expect = 7e-05, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 37/69 (54%), Gaps = 4/69 (6%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTC----NAMSRKLDKLTVLRMAVQ 120
+ + ++ + + +EKRRR ++N + +L +L+ ++ KL+K +L M V+
Sbjct 27 KPKSASEHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVK 86
Query 121 HMKTLRGAT 129
H++ L+
Sbjct 87 HLRNLQRVQ 95
>sp|Q5TGS1|HES3_HUMAN Transcription factor HES-3 OS=Homo sapiens
OX=9606 GN=HES3 PE=3 SV=1
Length=186
Score = 47.6 bits (111), Expect = 7e-05, Method: Composition-based stats.
Identities = 16/54 (30%), Positives = 35/54 (65%), Gaps = 3/54 (6%)
Query 80 IEKRRRDKMNSFIDELASLVP---TCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
+EK+RR ++N +++L SL+ + RKL+K +L ++V++M++L+ +
Sbjct 1 MEKKRRARINVSLEQLKSLLEKHYSHQIRKRKLEKADILELSVKYMRSLQNSLQ 54
>sp|P13098|ESM8_DROME Enhancer of split m8 protein OS=Drosophila
melanogaster OX=7227 GN=E(spl)m8-HLH PE=1 SV=2
Length=179
Score = 47.6 bits (111), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 68/185 (37%), Gaps = 15/185 (8%)
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSR--KLDKLTVLRMA 118
+EYT + ++ +E++RR +MN +D L +LV ++DK +L A
Sbjct 1 MEYTTKTQIYQKVKKP--MLERQRRARMNKCLDNLKTLVAELRGDDGILRMDKAEMLESA 58
Query 119 VQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFK 178
V M+ + E P D K+ + A + V+ G + + +SV
Sbjct 59 VIFMRQQKTPKKVAQEEQSLPL----DSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMT 114
Query 179 ILNY----SQNDLIGQSLFDYL-HPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT 233
L Q QS D++ + D + + + + A D + P +
Sbjct 115 HLGRVYKNLQQFHEAQSAADFIQNSMDCSSMDK--APLSPASSGYHSDCDSPAPSPQPMQ 172
Query 234 PGPSR 238
R
Sbjct 173 QPLWR 177
>sp|Q6PBD4|HES4_XENTR Transcription factor HES-4 OS=Xenopus tropicalis
OX=8364 GN=hes4 PE=2 SV=1
Length=281
Score = 48.7 bits (114), Expect = 7e-05, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 37/69 (54%), Gaps = 4/69 (6%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTC----NAMSRKLDKLTVLRMAVQ 120
+ + ++ + + +EKRRR ++N + +L +L+ ++ KL+K +L M V+
Sbjct 27 KPKSASEHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVK 86
Query 121 HMKTLRGAT 129
H++ L+
Sbjct 87 HLRNLQRVQ 95
>sp|Q18711|MXL3_CAEEL Protein mxl-3 OS=Caenorhabditis elegans
OX=6239 GN=mxl-3 PE=1 SV=1
Length=235
Score = 48.4 bits (113), Expect = 8e-05, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 31/66 (47%), Gaps = 2/66 (3%)
Query 70 IKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGAT 129
+ R H+++E+RRRD + L +P + K + +L+ AV+ + ++
Sbjct 45 DDDRRAHHNELERRRRDHIKDHFTILKDAIPLLDGE--KSSRALILKRAVEFIHVMQTKL 102
Query 130 NPYTEA 135
+ +A
Sbjct 103 SSQGKA 108
>sp|Q90VV1|HES4B_XENLA Transcription factor HES-4-B OS=Xenopus
laevis OX=8355 GN=hes4-b PE=1 SV=1
Length=277
Score = 48.4 bits (113), Expect = 8e-05, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 37/69 (54%), Gaps = 4/69 (6%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTC----NAMSRKLDKLTVLRMAVQ 120
+ + ++ + + +EKRRR ++N + +L +L+ ++ KL+K +L M V+
Sbjct 27 KPKSASEHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVK 86
Query 121 HMKTLRGAT 129
H++ L+
Sbjct 87 HLRNLQRVQ 95
>sp|Q96HZ4|HES6_HUMAN Transcription cofactor HES-6 OS=Homo sapiens
OX=9606 GN=HES6 PE=1 SV=1
Length=224
Score = 48.0 bits (112), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 52/150 (35%), Gaps = 18/150 (12%)
Query 53 DKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 112
+D E + AR+ +EK+RR ++N + EL L+ + KL+
Sbjct 8 GRDRVGREDEDGWETRGDRKARKP--LVEKKRRARINESLQELRLLL-AGAEVQAKLENA 64
Query 113 TVLRMAVQHMKTL---RGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKI 169
VL + V+ ++ + R +A F + + F+ +
Sbjct 65 EVLELTVRRVQGVLRGRAREREQLQAEASERFAAGYI---QCMHEVHTFVSTCQAIDATV 121
Query 170 LFVSESVFKILNYSQNDL---IGQSLFDYL 196
++LN+ + G S D L
Sbjct 122 ------AAELLNHLLESMPLREGSSFQDLL 145
>sp|Q9M1K1|ORG2_ARATH Transcription factor ORG2 OS=Arabidopsis
thaliana OX=3702 GN=ORG2 PE=1 SV=1
Length=253
Score = 48.4 bits (113), Expect = 8e-05, Method: Composition-based stats.
Identities = 13/62 (21%), Positives = 29/62 (47%), Gaps = 1/62 (2%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
+ H+ E+ RR K+N+ L S +P + S+KL + +++++ L+
Sbjct 72 KKLNHNASERDRRKKINTLFSSLRSCLPASDQ-SKKLSIPETVSKSLKYIPELQQQVKRL 130
Query 133 TE 134
+
Sbjct 131 IQ 132
>sp|Q61657|HES3_MOUSE Transcription factor HES-3 OS=Mus musculus
OX=10090 GN=Hes3 PE=2 SV=2
Length=175
Score = 47.2 bits (110), Expect = 9e-05, Method: Composition-based stats.
Identities = 16/54 (30%), Positives = 35/54 (65%), Gaps = 3/54 (6%)
Query 80 IEKRRRDKMNSFIDELASLVP---TCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
+EK+RR ++N +++L SL+ + RKL+K +L ++V++M++L+ +
Sbjct 1 MEKKRRARINVSLEQLRSLLERHYSHQIRKRKLEKADILELSVKYMRSLQNSLQ 54
>sp|P57101|HAND2_XENLA Heart- and neural crest derivatives-expressed
protein 2 OS=Xenopus laevis OX=8355 GN=hand2 PE=2 SV=1
Length=210
Score = 47.6 bits (111), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/77 (25%), Positives = 32/77 (42%), Gaps = 1/77 (1%)
Query 68 GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
R R ++ E+RR +NS EL +P A + KL K+ LR+A ++ L
Sbjct 88 QRPVKRRGTANRKERRRTISINSAFAELRECIPNVPADT-KLSKIKTLRLATSYIAYLMD 146
Query 128 ATNPYTEANYKPTFLSD 144
+ F ++
Sbjct 147 LLAKDDQNGETEAFKAE 163
>sp|G5EF76|LIN22_CAEEL Helix-loop-helix protein lin-22 OS=Caenorhabditis
elegans OX=6239 GN=lin-22 PE=1 SV=1
Length=173
Score = 46.8 bits (109), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 38/71 (54%), Gaps = 6/71 (8%)
Query 65 EHQGRIKNAREAHSQ--IEKRRRDKMNSFIDELAS-LVPTCNAMS---RKLDKLTVLRMA 118
E G I ++ ++ +EK+RR ++N + +L L+ + S K +K +L MA
Sbjct 12 ESDGGISRCKKIKNKPLMEKKRRARINKSLSQLKQILIQDEHKNSIQHSKWEKADILEMA 71
Query 119 VQHMKTLRGAT 129
V++++ LR A
Sbjct 72 VEYLQQLRSAQ 82
>sp|Q01069|ESMB_DROME Enhancer of split mbeta protein OS=Drosophila
melanogaster OX=7227 GN=E(spl)mbeta-HLH PE=1 SV=2
Length=195
Score = 47.2 bits (110), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/113 (19%), Positives = 43/113 (38%), Gaps = 11/113 (10%)
Query 81 EKRRRDKMNSFIDELA----SLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA- 135
E++RR ++N +DEL + +L+K +L + V+HMK LR +
Sbjct 22 ERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEHMKKLRAQKQLRLSSV 81
Query 136 ------NYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNY 182
+ P + + + AA+ + G + + + L +
Sbjct 82 TGGVSPSADPKLSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGTQLMSHLGH 134
>sp|O08789|MNT_MOUSE Max-binding protein MNT OS=Mus musculus OX=10090
GN=Mnt PE=2 SV=2
Length=591
Score = 49.1 bits (115), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Query 57 PHGRLEYTEHQGRIKN--AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTV 114
P + +E + R RE H+++EK RR + + L +P + +K L+V
Sbjct 205 PAEEAKSSEQKKRPGGIGTREVHNKLEKNRRAHLKECFETLKRNIPNVDD--KKTSNLSV 262
Query 115 LRMAVQHMKTLRGATNPYTEANYK------PTFLSDDELKHLILRAAD 156
LR A++++++L+ Y + T ELKH + + D
Sbjct 263 LRTALRYIQSLKRKEKEYEHEMERLAREKIATQQRLAELKHELSQWMD 310
>sp|Q56YJ8|FAMA_ARATH Transcription factor FAMA OS=Arabidopsis
thaliana OX=3702 GN=FAMA PE=1 SV=1
Length=414
Score = 48.7 bits (114), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/97 (20%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query 41 GSSTDYQESMDTDKDDPHGRLEYTEHQG--RIKNAREAHSQIEKRRRDKMNSFIDELASL 98
G D + T K+ R + +++ R H +E+ RR +MN + L SL
Sbjct 161 GEEEDRENKNVTKKEVKSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSL 220
Query 99 VPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA 135
+P + ++ D+ +++ A++ ++ L
Sbjct 221 MP--GSYVQRGDQASIIGGAIEFVRELEQLLQCLESQ 255
>sp|O81313|IND_ARATH Transcription factor IND OS=Arabidopsis thaliana
OX=3702 GN=IND PE=1 SV=3
Length=198
Score = 47.2 bits (110), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 35/72 (49%), Gaps = 4/72 (6%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
++ ++ + + + + +RRR++++ I L +VP K+D ++L A+++ K
Sbjct 111 PNRRNVRISDDPQTVVARRRRERISEKIRILKRIVP----GGAKMDTASMLDEAIRYTKF 166
Query 125 LRGATNPYTEAN 136
L+ +
Sbjct 167 LKRQVRILQPHS 178
>sp|Q99583|MNT_HUMAN Max-binding protein MNT OS=Homo sapiens OX=9606
GN=MNT PE=1 SV=1
Length=582
Score = 49.1 bits (115), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 10/108 (9%)
Query 57 PHGRLEYTEHQGRIKN--AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTV 114
P ++ +E + R RE H+++EK RR + + L +P + +K L+V
Sbjct 203 PAEEVKSSEQKKRPGGIGTREVHNKLEKNRRAHLKECFETLKRNIPNVDD--KKTSNLSV 260
Query 115 LRMAVQHMKTLRGATNPYTEANYK------PTFLSDDELKHLILRAAD 156
LR A++++++L+ Y + T ELKH + + D
Sbjct 261 LRTALRYIQSLKRKEKEYEHEMERLAREKIATQQRLAELKHELSQWMD 308
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis
thaliana OX=3702 GN=BHLH35 PE=2 SV=1
Length=248
Score = 48.0 bits (112), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/82 (20%), Positives = 36/82 (44%), Gaps = 4/82 (5%)
Query 54 KDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT 113
++ G + + G + + E+ RR K+N + L S+VP K+DK +
Sbjct 33 EEAISGSYDSSSPDGAASSPASKNIVSERNRRQKLNQRLFALRSVVP----NITKMDKAS 88
Query 114 VLRMAVQHMKTLRGATNPYTEA 135
+++ A+ +++ L+
Sbjct 89 IIKDAISYIEGLQYEEKKLEAE 110
>sp|B8AH97|BCL2_ORYSI Basic helix-loop-helix protein 79 OS=Oryza
sativa subsp. indica OX=39946 GN=BCL2 PE=3 SV=1
Length=361
Score = 48.4 bits (113), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 47/123 (38%), Gaps = 18/123 (15%)
Query 8 ISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQ 67
+ + PG V + +S ++ + + + +
Sbjct 121 VGKGRPERARPGAKKKA-------EVASPKDSPATSA---STVTAGQKTDYIHV-----R 165
Query 68 GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
R A ++HS E+ RR++++ + L LVP CN ++ K +L + ++++L+
Sbjct 166 ARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTG---KAGMLDEIINYVQSLQK 222
Query 128 ATN 130
Sbjct 223 QVE 225
>sp|D0PX88|RHL1_LOTJA bHLH transcription factor RHL1 OS=Lotus
japonicus OX=34305 GN=RHL1 PE=2 SV=1
Length=386
Score = 48.7 bits (114), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/63 (29%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMK 123
+ R A + HS E+ RR+++ + L LVP N K DK ++L + ++K
Sbjct 172 PRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNAN----KTDKASMLDEIIDYVK 227
Query 124 TLR 126
L+
Sbjct 228 FLQ 230
>sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis
thaliana OX=3702 GN=BHLH62 PE=2 SV=1
Length=456
Score = 48.7 bits (114), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 70/194 (36%), Gaps = 11/194 (6%)
Query 24 LSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKR 83
S+ + ++ E +Y + R A ++HS E+
Sbjct 216 PSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERV 275
Query 84 RRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN----PYTEANYKP 139
RR+K++ + L LVP CN ++ K +L + ++++L+ + N +
Sbjct 276 RREKISERMKLLQDLVPGCNKVTG---KALMLDEIINYVQSLQRQVEFLSMKLSSVNTRL 332
Query 140 TFLSDDELKHLILRAADGFL---FVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYL 196
F D L I +++ + V+ D + + K L + D+ ++ + L
Sbjct 333 DFNMDALLSKDIFPSSNNLMHHQQVLQLDSSAETLLGDHHNKNLQLNP-DISSNNVINPL 391
Query 197 HPKDIAKVKEQLSS 210
+ L +
Sbjct 392 ETSETRSFISHLPT 405
>sp|Q04635|ESC1_SCHPO Protein esc1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) OX=284812 GN=esc1 PE=2 SV=1
Length=413
Score = 48.7 bits (114), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/68 (28%), Positives = 32/68 (47%), Gaps = 2/68 (3%)
Query 62 EYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQH 121
EYT R R +H E++RR ++ D+L +P S K K +L A+Q+
Sbjct 324 EYTGPYTRNPELRTSHKLAERKRRKEIKELFDDLKDALPLDK--STKSSKWGLLTRAIQY 381
Query 122 MKTLRGAT 129
++ L+
Sbjct 382 IEQLKSEQ 389
>sp|Q9M128|BH057_ARATH Transcription factor bHLH57 OS=Arabidopsis
thaliana OX=3702 GN=BHLH57 PE=1 SV=1
Length=315
Score = 48.4 bits (113), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/108 (19%), Positives = 44/108 (41%), Gaps = 5/108 (5%)
Query 31 SGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNS 90
D K + ++ + R +++ ++N R H +E+ RR +MN
Sbjct 74 GQTDDPEKDPRTE---NGAVTVKEKRKRKRTRAPKNKDEVENQRMTHIAVERNRRRQMNE 130
Query 91 FIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYK 138
++ L SL+P + ++ D+ +++ A+ +K L K
Sbjct 131 HLNSLRSLMPP--SFLQRGDQASIVGGAIDFIKELEQLLQSLEAEKRK 176
>sp|Q07291|ESM8_DROHY Enhancer of split m8 protein OS=Drosophila
hydei OX=7224 GN=E(spl)m8-HLH PE=3 SV=1
Length=183
Score = 46.8 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 5/123 (4%)
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSR--KLDKLTVLRMA 118
+EYT + ++ +E++RR ++N +D L +LV ++DK +L A
Sbjct 1 MEYTTKTQIYQKVKKP--LLERQRRARINKCLDTLKTLVADVRGDDGILRMDKAEMLESA 58
Query 119 VQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFK 178
V M+ + + A P + ++ + A + V+ G + + +SV
Sbjct 59 VVFMRQQKTGKSTEIPAAATPPM-PLESFRNGYMNAVNEVSRVMASTPGMSVDLGKSVMS 117
Query 179 ILN 181
L
Sbjct 118 HLG 120
>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis
thaliana OX=3702 GN=BHLH81 PE=2 SV=1
Length=262
Score = 48.0 bits (112), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/137 (22%), Positives = 53/137 (39%), Gaps = 9/137 (7%)
Query 16 MSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQ--ESMDTDKDDPHGRLEYTEHQGRIKNA 73
+SPG S + + KG + Q + + D L R++
Sbjct 128 VSPGSKRSREMEALFSSPEFTSQMKGEQSSGQVPTGVSSMSDMNMENLMEDSVAFRVRAK 187
Query 74 R----EAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGAT 129
R S E+ RR +++ I +L LVP + + D +L AV+++K L+
Sbjct 188 RGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAD---MLEEAVEYVKVLQRQI 244
Query 130 NPYTEANYKPTFLSDDE 146
TE + T + +E
Sbjct 245 QELTEEQKRCTCIPKEE 261
>sp|Q6Z2G7|BCL2_ORYSJ Basic helix-loop-helix protein 79 OS=Oryza
sativa subsp. japonica OX=39947 GN=BCL2 PE=1 SV=1
Length=361
Score = 48.4 bits (113), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 47/123 (38%), Gaps = 18/123 (15%)
Query 8 ISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQ 67
+ + PG V + +S ++ + + + +
Sbjct 121 VGKGRPERARPGAKKKA-------EVASPKDSPATSA---STVTAGQKTDYIHV-----R 165
Query 68 GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
R A ++HS E+ RR++++ + L LVP CN ++ K +L + ++++L+
Sbjct 166 ARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTG---KAGMLDEIINYVQSLQK 222
Query 128 ATN 130
Sbjct 223 QVE 225
>sp|Q9JHE6|HES6_MOUSE Transcription cofactor HES-6 OS=Mus musculus
OX=10090 GN=Hes6 PE=1 SV=1
Length=224
Score = 47.2 bits (110), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 50/144 (35%), Gaps = 6/144 (4%)
Query 53 DKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 112
+D E + AR+ +EK+RR ++N + EL L+ + KL+
Sbjct 8 SRDRAGQEDEDRWEARGDRKARKP--LVEKKRRARINESLQELRLLL-AGTEVQAKLENA 64
Query 113 TVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFV 172
VL + V + ++GA + + + ++ V + V
Sbjct 65 EVLELTV---RRVQGALRGRAREREQLQAEASERFAAGYIQCMHEVHTFVSTCQAIDATV 121
Query 173 SESVFKILNYSQNDLIGQSLFDYL 196
S + L S G S D L
Sbjct 122 SAELLNHLLESMPLREGSSFQDLL 145
>sp|Q9LQ08|BH125_ARATH Transcription factor bHLH125 OS=Arabidopsis
thaliana OX=3702 GN=BHLH125 PE=2 SV=1
Length=259
Score = 47.6 bits (111), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query 55 DDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTV 114
D +G E ++ ++ + H IE++RR +++S L +L+P ++ +
Sbjct 56 DITYGANEANKNDDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHI 115
Query 115 LRMAVQHMKTLR 126
++ AV ++K L+
Sbjct 116 VQ-AVNYIKDLQ 126
>sp|Q12398|HMS1_YEAST Probable transcription factor HMS1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) OX=559292
GN=HMS1 PE=1 SV=1
Length=434
Score = 48.4 bits (113), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 43/103 (42%), Gaps = 25/103 (24%)
Query 45 DYQESMDTDKDDPHGRLEY---TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 101
D +SM R + + R++ R +H+ IEK+ R +N I++L VPT
Sbjct 236 DNADSMSFKLKTSPIRKHFHVKPKRITRVRTGRVSHNIIEKKYRSNINDKIEQLRRTVPT 295
Query 102 -------CNAMS---------------RKLDKLTVLRMAVQHM 122
CN + KL+K ++L +++++
Sbjct 296 LRVAYKKCNDLPITSRDLADLDGLEPATKLNKASILTKSIEYI 338
>sp|P57102|HAND2_DANRE Heart- and neural crest derivatives-expressed
protein 2 OS=Danio rerio OX=7955 GN=hand2 PE=2 SV=1
Length=208
Score = 47.2 bits (110), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
R R ++ E+RR +NS EL +P A + KL K+ LR+A ++ L
Sbjct 87 RTVKRRPTANRKERRRTQSINSAFAELRECIPNVPADT-KLSKIKTLRLATSYIAYLMDI 145
Query 129 TNPYTEANYKPTFLSD 144
+ + F ++
Sbjct 146 LDKDEQNGETEAFKAE 161
>sp|Q22717|HLH3_CAEEL Helix-loop-helix protein 3 OS=Caenorhabditis
elegans OX=6239 GN=hlh-3 PE=1 SV=2
Length=170
Score = 46.4 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/73 (21%), Positives = 32/73 (44%), Gaps = 0/73 (0%)
Query 63 YTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
+ K ++ ++ E++R D++N L VP KL K+ LR A +++
Sbjct 17 SSSKSSVTKQTKQKRNERERKRVDQVNQGFVLLQERVPKAAGNKAKLSKVETLREAARYI 76
Query 123 KTLRGATNPYTEA 135
+ L+ + +
Sbjct 77 QELQKQLGMSSTS 89
>sp|Q93VJ4|BEE2_ARATH Transcription factor BEE 2 OS=Arabidopsis
thaliana OX=3702 GN=BEE2 PE=1 SV=1
Length=304
Score = 48.0 bits (112), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/117 (21%), Positives = 48/117 (41%), Gaps = 14/117 (12%)
Query 34 DCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFID 93
K S+T+ + D H R E R HS E+ RR+K++ +
Sbjct 117 SMKGKSNMSNTETSSEIQ-KPDYIHVRARRGEATDR-------HSLAERARREKISKKMK 168
Query 94 ELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHL 150
L +VP CN ++ K +L + ++++L+ + K + ++ + H+
Sbjct 169 CLQDIVPGCNKVTG---KAGMLDEIINYVQSLQQQVEFL---SMKLSVINPELECHI 219
>sp|Q9ZUG9|LRL1_ARATH Transcription factor LRL1 OS=Arabidopsis
thaliana OX=3702 GN=LRL1 PE=1 SV=1
Length=350
Score = 48.0 bits (112), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/67 (27%), Positives = 34/67 (51%), Gaps = 8/67 (12%)
Query 64 TEHQGRIKNAR----EAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
+ + +I+ R + HS E+ RR+++ + L LVP N K DK ++L +
Sbjct 132 PQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGN----KTDKASMLDEII 187
Query 120 QHMKTLR 126
++K L+
Sbjct 188 DYVKFLQ 194
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis
thaliana OX=3702 GN=BHLH27 PE=2 SV=1
Length=263
Score = 47.6 bits (111), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 38/100 (38%), Gaps = 10/100 (10%)
Query 51 DTDKDDPHGRLEYTEHQGRIKNAREAHSQ--IEKRRRDKMNSFIDELASLVPTCNAMSRK 108
++ + + + E+ RR K+N + L S+VP K
Sbjct 27 SWPMEEAFSGSGESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVP----NISK 82
Query 109 LDKLTVLRMAVQHMKTL----RGATNPYTEANYKPTFLSD 144
LDK +V++ ++ +M+ L + E + T L +
Sbjct 83 LDKASVIKDSIDYMQELIDQEKTLEAEIRELESRSTLLEN 122
>sp|P70562|BHA15_RAT Class A basic helix-loop-helix protein 15
OS=Rattus norvegicus OX=10116 GN=Bhlha15 PE=1 SV=1
Length=197
Score = 46.8 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 4/109 (4%)
Query 17 SPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREA 76
+PG S G+ + KG + + T + R + + R
Sbjct 20 TPGEQTPDRSQSGSGASEVT---KGLRSRTARASGTRAEVSRRRQGSSSRRENSVQRRLE 76
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
++ E++R K+N+ L ++P A KL K+ L +A ++K+L
Sbjct 77 SNERERQRMHKLNNAFQALREVIPHVRADK-KLSKIETLTLAKNYIKSL 124
>sp|O54792|HES2_MOUSE Transcription factor HES-2 OS=Mus musculus
OX=10090 GN=Hes2 PE=2 SV=2
Length=157
Score = 46.1 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/65 (31%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query 68 GRIKNAREAHSQI----EKRRRDKMNSFIDELASL-VPTCNAM---SRKLDKLTVLRMAV 119
R+++A E + EKRRR ++N + +L L +P A S KL+K +L M V
Sbjct 5 RRVEDAAELRKNLKPLLEKRRRARINESLSQLKGLVLPLLGAETSRSSKLEKADILEMTV 64
Query 120 QHMKT 124
+ ++
Sbjct 65 RFLQE 69
>sp|Q9PSI9|MCL1A_DANRE Protein L-Myc-1a OS=Danio rerio OX=7955
GN=mycl1a PE=2 SV=2
Length=372
Score = 48.0 bits (112), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 52/157 (33%), Gaps = 20/157 (13%)
Query 13 SDFMSPGPTDLLSSSLGTS----GVDCNRKR-----KGSSTDYQESMDTDKDDPHGRLEY 63
+P + + G V +R++ TD ++ + + RLE
Sbjct 211 PSRRTPVTITVSADPFGPCPKRFHVSLHRQQHNYAAPSPDTDPEDDFEIEPVSKRPRLES 270
Query 64 TEHQ----------GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT 113
+ + + + +E++RRD + S L +P + S K K+
Sbjct 271 SSAPSSPLSSPATSDSEDSTEQRRNFLERKRRDDLRSRFQALREEIPGLSG-SSKTSKVA 329
Query 114 VLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHL 150
+L A ++ L + + K L+ +
Sbjct 330 ILTQATDYLLQLHSSQRRQAQEKRKLKAKQQQLLRRI 366
>sp|Q10574|LIN32_CAEEL Protein lin-32 OS=Caenorhabditis elegans
OX=6239 GN=lin-32 PE=1 SV=2
Length=142
Score = 45.7 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 38/83 (46%), Gaps = 1/83 (1%)
Query 54 KDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT 113
D R T ++ R A ++ E+RR + +N DEL ++P ++ KL K
Sbjct 54 DDKKKCRRYKTPSPQLLRMRRSAANERERRRMNTLNVAYDELREVLPEIDSGK-KLSKFE 112
Query 114 VLRMAVQHMKTLRGATNPYTEAN 136
L+MA ++++ L ++
Sbjct 113 TLQMAQKYIECLSQILKQDSKNE 135
>sp|Q9Y543|HES2_HUMAN Transcription factor HES-2 OS=Homo sapiens
OX=9606 GN=HES2 PE=2 SV=1
Length=173
Score = 46.4 bits (108), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/53 (34%), Positives = 30/53 (57%), Gaps = 4/53 (8%)
Query 81 EKRRRDKMNSFIDELASL-VPT---CNAMSRKLDKLTVLRMAVQHMKTLRGAT 129
EKRRR ++N + +L L +P N+ KL+K VL M V+ ++ L ++
Sbjct 22 EKRRRARINQSLSQLKGLILPLLGRENSNCSKLEKADVLEMTVRFLQELPASS 74
>sp|P61295|HAND2_RAT Heart- and neural crest derivatives-expressed
protein 2 OS=Rattus norvegicus OX=10116 GN=Hand2 PE=2 SV=1
Length=217
Score = 47.2 bits (110), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/73 (25%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query 72 NAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNP 131
R ++ E+RR +NS EL +P A + KL K+ LR+A ++ L
Sbjct 99 KRRGTANRKERRRTQSINSAFAELRECIPNVPADT-KLSKIKTLRLATSYIAYLMDLLAK 157
Query 132 YTEANYKPTFLSD 144
+ F ++
Sbjct 158 DDQNGEAEAFKAE 170
>sp|Q61039|HAND2_MOUSE Heart- and neural crest derivatives-expressed
protein 2 OS=Mus musculus OX=10090 GN=Hand2 PE=1 SV=3
Length=217
Score = 47.2 bits (110), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/73 (25%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query 72 NAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNP 131
R ++ E+RR +NS EL +P A + KL K+ LR+A ++ L
Sbjct 99 KRRGTANRKERRRTQSINSAFAELRECIPNVPADT-KLSKIKTLRLATSYIAYLMDLLAK 157
Query 132 YTEANYKPTFLSD 144
+ F ++
Sbjct 158 DDQNGEAEAFKAE 170
>sp|P61296|HAND2_HUMAN Heart- and neural crest derivatives-expressed
protein 2 OS=Homo sapiens OX=9606 GN=HAND2 PE=1 SV=1
Length=217
Score = 47.2 bits (110), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/73 (25%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query 72 NAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNP 131
R ++ E+RR +NS EL +P A + KL K+ LR+A ++ L
Sbjct 99 KRRGTANRKERRRTQSINSAFAELRECIPNVPADT-KLSKIKTLRLATSYIAYLMDLLAK 157
Query 132 YTEANYKPTFLSD 144
+ F ++
Sbjct 158 DDQNGEAEAFKAE 170
>sp|P52164|MAX_RAT Protein max OS=Rattus norvegicus OX=10116 GN=Max
PE=1 SV=1
Length=160
Score = 46.1 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 5/84 (6%)
Query 54 KDDPHGRLEYTEHQGRIKN---AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLD 110
D+ +E E Q R ++ R H+ +E++RRD + L VP+ K
Sbjct 2 SDNDDIEVESDEEQPRFQSAADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQGE--KAS 59
Query 111 KLTVLRMAVQHMKTLRGATNPYTE 134
+ +L A ++++ +R + + +
Sbjct 60 RAQILDKATEYIQYMRRKNHTHQQ 83
>sp|Q9FXA3|BH095_ARATH Transcription factor bHLH95 OS=Arabidopsis
thaliana OX=3702 GN=BHLH95 PE=2 SV=2
Length=308
Score = 47.6 bits (111), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 35/126 (28%), Gaps = 18/126 (14%)
Query 35 CNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQ--------------- 79
N G E H E + R +
Sbjct 17 SNSDDSGGGCKRIEKEPLPSHPSHPSPEIQTTTVKKGKKRTKRNDKNHEEESPDHEIHIW 76
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKP 139
E+ RR KM +L +L+P + K DK T++ AV +K+L +
Sbjct 77 TERERRKKMRDMFSKLHALLP---QLPPKADKSTIVDEAVSSIKSLEQTLQKLEMQKLEK 133
Query 140 TFLSDD 145
S
Sbjct 134 LQYSSA 139
>sp|Q6SYV5|MYF6_TAKRU Myogenic factor 6 OS=Takifugu rubripes OX=31033
GN=myf6 PE=2 SV=1
Length=239
Score = 47.2 bits (110), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/80 (24%), Positives = 37/80 (46%), Gaps = 2/80 (3%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ + + R+A + E+RR K+N D L T +++L K+ +LR A+ +++
Sbjct 89 KRKSAPTDRRKAATLRERRRLKKINEAFDALKRK--TVANPNQRLPKVEILRSAISYIER 146
Query 125 LRGATNPYTEANYKPTFLSD 144
L+ E + SD
Sbjct 147 LQDLLQTLDEQERSQSGASD 166
>sp|Q700E4|BH067_ARATH Transcription factor bHLH67 OS=Arabidopsis
thaliana OX=3702 GN=BHLH67 PE=2 SV=1
Length=358
Score = 48.0 bits (112), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 43/88 (49%), Gaps = 3/88 (3%)
Query 70 IKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGAT 129
I+N R H +E+ RR +MN I+ L +L+P + ++ D+ +++ A+ ++K L
Sbjct 173 IENQRINHIAVERNRRRQMNEHINSLRALLPP--SYIQRGDQASIVGGAINYVKVLEQII 230
Query 130 NPYTEANYKPTFLSDDELKHLILRAADG 157
E+ + S+ E+ L G
Sbjct 231 QSL-ESQKRTQQQSNSEVVENALNHLSG 257
>sp|Q02576|HEN1_MOUSE Helix-loop-helix protein 1 OS=Mus musculus
OX=10090 GN=Nhlh1 PE=2 SV=1
Length=133
Score = 45.3 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/52 (35%), Positives = 28/52 (54%), Gaps = 1/52 (2%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
R AH+ E+ R + N EL L+PT KL K+ +LR+A+ ++ L
Sbjct 77 RTAHATRERIRVEAFNLAFAELRKLLPTLPPDK-KLSKIEILRLAICYISYL 127
>sp|Q8LEG1|RSL4_ARATH Transcription factor RSL3 OS=Arabidopsis
thaliana OX=3702 GN=RSL4 PE=1 SV=1
Length=258
Score = 47.2 bits (110), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/115 (23%), Positives = 49/115 (43%), Gaps = 11/115 (10%)
Query 48 ESMDTDKDDPHGRLEYTEHQGR--IKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAM 105
+S+ DD + + + R A + S ++RR+K+N + L +LVP
Sbjct 147 QSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVP----N 202
Query 106 SRKLDKLTVLRMAVQHMKTLRGATNPYTEAN---YKPTFLSDDELK--HLILRAA 155
K+D T+L AV ++K L+ + + Y P + ++ H +L
Sbjct 203 GTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPLAYNGLDMGFHHNLLSRL 257
>sp|Q6PUV5|MYF6_TETNG Myogenic factor 6 OS=Tetraodon nigroviridis
OX=99883 GN=myf6 PE=2 SV=2
Length=239
Score = 46.8 bits (109), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/131 (21%), Positives = 55/131 (42%), Gaps = 11/131 (8%)
Query 16 MSPGPTDLLSSSLGTSGVDCN-RKRKGSSTDYQ-ESMDTDKDDPHGRLEYTEHQGRIKNA 73
+SPGP ++ S + G S D + G + + + + + + +
Sbjct 45 LSPGPDNVPSETGGESSGDEHVLAPPGLRAHCEGQCLMWA-------CKVCKRKSAPTDR 97
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
R+A + E+RR K+N D L + +++L K+ +LR A+ +++ L+
Sbjct 98 RKAATLRERRRLKKINEAFDALKRK--SVANPNQRLPKVEILRSAISYIERLQELLQSLD 155
Query 134 EANYKPTFLSD 144
E + SD
Sbjct 156 EQERGQSGASD 166
>sp|Q0VH32|MNT_XENLA Max-binding protein MNT OS=Xenopus laevis
OX=8355 GN=mnt PE=2 SV=1
Length=574
Score = 48.4 bits (113), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (3%)
Query 58 HGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRM 117
GR + RE H+++EK RR + + L +P + +K L+VLR
Sbjct 209 DGRSNEQRRRPGGAGTREVHNKLEKNRRAHLKECFETLKRNIPNVDD--KKTSNLSVLRS 266
Query 118 AVQHMKTLRGATNPYTEA 135
A++++++L+ Y
Sbjct 267 ALRYIQSLKRKEKEYEHE 284
>sp|Q02575|HEN1_HUMAN Helix-loop-helix protein 1 OS=Homo sapiens
OX=9606 GN=NHLH1 PE=1 SV=1
Length=133
Score = 45.3 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/52 (35%), Positives = 28/52 (54%), Gaps = 1/52 (2%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
R AH+ E+ R + N EL L+PT KL K+ +LR+A+ ++ L
Sbjct 77 RTAHATRERIRVEAFNLAFAELRKLLPTLPPDK-KLSKIEILRLAICYISYL 127
>sp|P28574|MAX_MOUSE Protein max OS=Mus musculus OX=10090 GN=Max
PE=1 SV=2
Length=160
Score = 45.7 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 5/84 (6%)
Query 54 KDDPHGRLEYTEHQGRIKN---AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLD 110
D+ +E E Q R ++ R H+ +E++RRD + L VP+ K
Sbjct 2 SDNDDIEVESDEEQPRFQSAADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQGE--KAS 59
Query 111 KLTVLRMAVQHMKTLRGATNPYTE 134
+ +L A ++++ +R + + +
Sbjct 60 RAQILDKATEYIQYMRRKNHTHQQ 83
>sp|P52162|MAX_CHICK Protein max OS=Gallus gallus OX=9031 GN=MAX
PE=3 SV=1
Length=160
Score = 45.7 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 5/84 (6%)
Query 54 KDDPHGRLEYTEHQGRIKN---AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLD 110
D+ +E E Q R ++ R H+ +E++RRD + L VP+ K
Sbjct 2 SDNDDIEVESDEEQPRFQSAADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQGE--KAS 59
Query 111 KLTVLRMAVQHMKTLRGATNPYTE 134
+ +L A ++++ +R + + +
Sbjct 60 RAQILDKATEYIQYMRRKNHTHQQ 83
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis
thaliana OX=3702 GN=SCRM PE=1 SV=1
Length=494
Score = 48.0 bits (112), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 28/53 (53%), Gaps = 4/53 (8%)
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
E+RRR K+N + L S+VP K+D+ ++L A+ ++K L N
Sbjct 311 AERRRRKKLNDRLYMLRSVVP----KISKMDRASILGDAIDYLKELLQRINDL 359
>sp|Q05404|MCL1A_XENLA Protein L-Myc-1-A OS=Xenopus laevis OX=8355
GN=mycl1-a PE=2 SV=2
Length=344
Score = 47.6 bits (111), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 44/126 (35%), Gaps = 4/126 (3%)
Query 13 SDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKN 72
+ + P P + S + ++ G T P L
Sbjct 205 AARLPPEPNSMSPQPNFHSPI---KEEPGEVTSPPALQQCSSPMPGSPLASGSSDSEDIV 261
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
++ H+ +E++RR+ + S L VP+ ++ K+ VL A + +K L
Sbjct 262 KKKNHNYLERKRRNDLRSRFLALREEVPSLTRSTKTP-KVVVLSKATEFLKGLVIQEQQL 320
Query 133 TEANYK 138
T +K
Sbjct 321 TAEKFK 326
>sp|Q90691|HAND1_CHICK Heart- and neural crest derivatives-expressed
protein 1 OS=Gallus gallus OX=9031 GN=HAND1 PE=2 SV=1
Length=202
Score = 46.4 bits (108), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query 81 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPT 140
E+RR + +NS EL +P A + KL K+ LR+A ++ L ++
Sbjct 92 ERRRTESINSAFAELRECIPNVPADT-KLSKIKTLRLATSYIAYLMEVLARDSQPGEPEG 150
Query 141 FLSDDELKHLILRAADG 157
F ++ L+ ADG
Sbjct 151 FKAE-------LKKADG 160
>sp|Q90690|HAND2_CHICK Heart- and neural crest derivatives-expressed
protein 2 OS=Gallus gallus OX=9031 GN=HAND2 PE=2 SV=1
Length=216
Score = 46.4 bits (108), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/73 (25%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query 72 NAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNP 131
R ++ E+RR +NS EL +P A + KL K+ LR+A ++ L
Sbjct 98 KRRGTANRKERRRTQSINSAFAELRECIPNVPADT-KLSKIKTLRLATSYIAYLMDLLPK 156
Query 132 YTEANYKPTFLSD 144
+ F ++
Sbjct 157 DDQNGEAEAFKAE 169
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis
thaliana OX=3702 GN=BHLH139 PE=3 SV=1
Length=223
Score = 46.4 bits (108), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/107 (21%), Positives = 40/107 (37%), Gaps = 13/107 (12%)
Query 40 KGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREA---------HSQIEKRRRDKMNS 90
K + D Q + D L + + + S ++RR+++N
Sbjct 97 KTAWRDGQSLSSYNSSDDEKALGLVSNTSKSLKRKAKANRGIASDPQSLYARKRRERIND 156
Query 91 FIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANY 137
+ L SLVP K+D T+L AV ++K L+ + +
Sbjct 157 RLKTLQSLVP----NGTKVDISTMLEDAVHYVKFLQLQIKLLSSEDL 199
>sp|A4D998|BH075_ARATH Transcription factor bHLH75 OS=Arabidopsis
thaliana OX=3702 GN=BHLH75 PE=2 SV=1
Length=223
Score = 46.4 bits (108), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/74 (22%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query 55 DDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTV 114
D+ + + + A ++HS E+ RR+K+N + L LVP C + +
Sbjct 93 DETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKA---MGMAVM 149
Query 115 LRMAVQHMKTLRGA 128
L + + ++++L+
Sbjct 150 LDVIIDYVRSLQNQ 163
>sp|Q04667|HES3_RAT Transcription factor HES-3 OS=Rattus norvegicus
OX=10116 GN=Hes3 PE=2 SV=1
Length=175
Score = 45.7 bits (106), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/54 (28%), Positives = 35/54 (65%), Gaps = 3/54 (6%)
Query 80 IEKRRRDKMNSFIDELASLVP---TCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
+EK+RR ++N +++L SL+ + RKL+K +L ++V+++++L+ +
Sbjct 1 MEKKRRARINLSLEQLRSLLERHYSHQIRKRKLEKADILELSVKYVRSLQNSLQ 54
>sp|P61244|MAX_HUMAN Protein max OS=Homo sapiens OX=9606 GN=MAX
PE=1 SV=1
Length=160
Score = 45.3 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 5/84 (6%)
Query 54 KDDPHGRLEYTEHQGRIKN---AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLD 110
D+ +E E Q R ++ R H+ +E++RRD + L VP+ K
Sbjct 2 SDNDDIEVESDEEQPRFQSAADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQGE--KAS 59
Query 111 KLTVLRMAVQHMKTLRGATNPYTE 134
+ +L A ++++ +R + + +
Sbjct 60 RAQILDKATEYIQYMRRKNHTHQQ 83
>sp|P61245|MAX_FELCA Protein max OS=Felis catus OX=9685 GN=MAX
PE=2 SV=1
Length=160
Score = 45.3 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 5/84 (6%)
Query 54 KDDPHGRLEYTEHQGRIKN---AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLD 110
D+ +E E Q R ++ R H+ +E++RRD + L VP+ K
Sbjct 2 SDNDDIEVESDEEQPRFQSAADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQGE--KAS 59
Query 111 KLTVLRMAVQHMKTLRGATNPYTE 134
+ +L A ++++ +R + + +
Sbjct 60 RAQILDKATEYIQYMRRKNHTHQQ 83
>sp|Q18277|HLH12_CAEEL Helix-loop-helix protein hlh-12 OS=Caenorhabditis
elegans OX=6239 GN=hlh-12 PE=1 SV=1
Length=150
Score = 45.3 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/67 (21%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
R ++ E++R +MN D L +L+P + +L ++ +LR A ++ L
Sbjct 14 RRSRANERERQRVSEMNGMFDVLLNLLPPSH-FKTRLSRVQILREATSYIIRLHNFLIES 72
Query 133 TEANYKP 139
+ ++
Sbjct 73 SNSDIDA 79
>sp|Q9QYC3|BHA15_MOUSE Class A basic helix-loop-helix protein
15 OS=Mus musculus OX=10090 GN=Bhlha15 PE=1 SV=1
Length=197
Score = 46.1 bits (107), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 10/112 (9%)
Query 17 SPG---PTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNA 73
+PG P S S G+ R R ++ + + R +
Sbjct 20 TPGEQTPDRPQSGSGGSELTKGLRSRTARASGGRGEV------SRRRQGSGGRRENSVQR 73
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
R ++ E++R K+N+ L ++P A KL K+ L +A ++K+L
Sbjct 74 RLESNERERQRMHKLNNAFQALREVIPHVRADK-KLSKIETLTLAKNYIKSL 124
>sp|Q8THF6|MSMS_METAC Methyl sulfide methyltransferase-associated
sensor OS=Methanosarcina acetivorans (strain ATCC 35395
/ DSM 2834 / JCM 12185 / C2A) OX=188937 GN=msmS PE=1 SV=1
Length=998
Score = 48.0 bits (112), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/298 (14%), Positives = 96/298 (32%), Gaps = 51/298 (17%)
Query 172 VSESVFKILNYSQNDLI--GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVK 229
V+ ++ + YS D I G D ++P D+ Q S G +
Sbjct 33 VTANIVRF-GYSPKDFISGGLGYADIIYPADLEIAVSQFFSYVEKDY-------IGKDLD 84
Query 230 TDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLK 289
+ + +G + + + ++ + + S + + KS +
Sbjct 85 YKVEYREYKGEAGEHK------RNGKGNIGKDRGGYDSFTQQYRLLNKSGDVL------- 131
Query 290 SWPPTKMGLDEDNEPDNEGCNLSCL-VAIGRLHSHVVPQPVNGEIRVKSME-------YV 341
W ++ + E+ E ++ ++ + +P ++ E +K + ++
Sbjct 132 -WVEAEIKVLEEEEGKAGLFQVTVFDISRWKHTEKAMPAALDTENELKRIINSGHVIVFL 190
Query 342 SRHAIDGKFVFVDQRATAILAYLPQELL-GTSCY-EYFHQDDIGHLAECHRQVLQTREKI 399
R FV + + L Y P++ G Y + H DD+ ++ + +
Sbjct 191 WRAEPGWPVDFVSENISE-LGYTPEDFTSGRIVYTDIIHPDDLDNVRAEVSKNTEEGRDY 249
Query 400 TTNCYKFKIKDGSFITLRSRWFSFMN----------------PWTKEVEYIVSTNTVV 441
+ Y+ K G + R N + E I+S N V+
Sbjct 250 FSKEYRVLAKSGEVRYVDERTLIRRNEKGEITCYQGILLDITQRKEAEELILSQNRVL 307
>sp|O57598|ATOH7_CHICK Transcription factor ATOH7 OS=Gallus gallus
OX=9031 GN=ATOH7 PE=1 SV=2
Length=151
Score = 44.9 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/79 (28%), Positives = 33/79 (42%), Gaps = 5/79 (6%)
Query 63 YTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
TE R A + E+RR +N+ D L +VP KL K L+MA+ ++
Sbjct 30 STERMESAAKRRLAANARERRRMQGLNTAFDRLRKVVPQWGQDK-KLSKYETLQMALSYI 88
Query 123 ----KTLRGATNPYTEANY 137
+ L A TE +
Sbjct 89 MALTRILAEAERYSTEREW 107
>sp|P12980|LYL1_HUMAN Protein lyl-1 OS=Homo sapiens OX=9606 GN=LYL1
PE=1 SV=3
Length=280
Score = 46.8 bits (109), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/67 (33%), Positives = 35/67 (52%), Gaps = 2/67 (3%)
Query 57 PHGRLEYTE-HQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVL 115
H L+ E HQ + R + E+ R+ +N EL L+PT + RKL K VL
Sbjct 134 SHCELDLAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPT-HPPDRKLSKNEVL 192
Query 116 RMAVQHM 122
R+A++++
Sbjct 193 RLAMKYI 199
>sp|P23409|MYF6_HUMAN Myogenic factor 6 OS=Homo sapiens OX=9606
GN=MYF6 PE=1 SV=1
Length=242
Score = 46.4 bits (108), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 38/93 (41%), Gaps = 2/93 (2%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ + + R+A + E+RR K+N + L T +++L K+ +LR A+ +++
Sbjct 86 KRKSAPTDRRKAATLRERRRLKKINEAFEALKRR--TVANPNQRLPKVEILRSAISYIER 143
Query 125 LRGATNPYTEANYKPTFLSDDELKHLILRAADG 157
L+ + + D +G
Sbjct 144 LQDLLHRLDQQEKMQELGVDPFSYRPKQENLEG 176
>sp|Q5ADL8|TRY6_CANAL Transcriptional regulator of yeast form
adherence 6 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
OX=237561 GN=TRY6 PE=2 SV=1
Length=467
Score = 47.2 bits (110), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/97 (25%), Positives = 39/97 (40%), Gaps = 28/97 (29%)
Query 54 KDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTC----------- 102
+ ++ E R ++ HS IEKRRR K+N + L L+P C
Sbjct 74 RRRSTANIDSEELAKRKNETKQLHSIIEKRRRIKINREFEALKYLIPACRNCNTGSSGGS 133
Query 103 --------------NAMSRKLD---KLTVLRMAVQHM 122
N K+D KLT+L+ +V+++
Sbjct 134 ATPTSSTKKASTNSNNNGNKIDGMYKLTILKSSVEYI 170
>sp|Q9BW11|MAD3_HUMAN Max dimerization protein 3 OS=Homo sapiens
OX=9606 GN=MXD3 PE=1 SV=1
Length=206
Score = 46.1 bits (107), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/84 (24%), Positives = 34/84 (40%), Gaps = 3/84 (4%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
R H+++EKRRR ++ ++ L +P A + L++LR A H++ L
Sbjct 59 RSVHNELEKRRRAQLKRCLERLKQQMPLG-ADCARYTTLSLLRRARMHIQKLEDQEQR-- 115
Query 134 EANYKPTFLSDDELKHLILRAADG 157
K S + L G
Sbjct 116 ARQLKERLRSKQQSLQRQLEQLRG 139
>sp|Q01795|MYF6_CHICK Myogenic factor 6 OS=Gallus gallus OX=9031
GN=MYF6 PE=2 SV=1
Length=242
Score = 46.4 bits (108), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 38/80 (48%), Gaps = 2/80 (3%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ + + R+A + E+RR K+N + L T +++L K+ +LR A+ +++
Sbjct 86 KRKSAPTDRRKAATLRERRRLKKINEAFEALKRR--TVANPNQRLPKVEILRSAISYIER 143
Query 125 LRGATNPYTEANYKPTFLSD 144
L+ + + + +D
Sbjct 144 LQDLLHRLDQQDKMQEVAAD 163
>sp|Q7RTS1|BHA15_HUMAN Class A basic helix-loop-helix protein
15 OS=Homo sapiens OX=9606 GN=BHLHA15 PE=1 SV=1
Length=189
Score = 45.7 bits (106), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 39/117 (33%), Gaps = 1/117 (1%)
Query 9 SSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQG 68
+ +PG S R + + + G +
Sbjct 12 APVQDTEATPGEGTPDGSLPNPGPEPAKGLRSRPARAAARAPGEGRRRRPGPSGPGGRRD 71
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
R ++ E++R K+N+ L ++P A KL K+ L +A ++K+L
Sbjct 72 SSIQRRLESNERERQRMHKLNNAFQALREVIPHVRADK-KLSKIETLTLAKNYIKSL 127
>sp|Q91206|MYOD2_ONCMY Myoblast determination protein 1 homolog
2 OS=Oncorhynchus mykiss OX=8022 GN=myod2 PE=2 SV=1
Length=275
Score = 46.4 bits (108), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/77 (25%), Positives = 38/77 (49%), Gaps = 2/77 (3%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ + + R+A + E+RR K+N + L T N +++L K+ +LR A+ ++++
Sbjct 77 KRKTTNSDRRKAATMRERRRLGKVNDAFENLKRC--TSNNPNQRLPKVEILRNAISYIES 134
Query 125 LRGATNPYTEANYKPTF 141
L+ NY P
Sbjct 135 LQSLLRGQDGENYYPVL 151
>sp|P15375|MYF6_MOUSE Myogenic factor 6 OS=Mus musculus OX=10090
GN=Myf6 PE=2 SV=1
Length=242
Score = 46.1 bits (107), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ + + R+A + E+RR K+N + L T +++L K+ +LR A+ +++
Sbjct 86 KRKSAPTDRRKAATLRERRRLKKINEAFEALKRR--TVANPNQRLPKVEILRSAISYIER 143
Query 125 LRGATNPYTEANYKPTFLSDD---ELKHLILRAAD 156
L+ + + D + K IL AD
Sbjct 144 LQDLLHRLDQQEKMQELGVDPYSYKPKQEILEGAD 178
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis
thaliana OX=3702 GN=SCRM2 PE=1 SV=1
Length=450
Score = 47.2 bits (110), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 28/53 (53%), Gaps = 4/53 (8%)
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
E+RRR K+N + L S+VP K+D+ ++L A+ ++K L N
Sbjct 271 AERRRRKKLNDRLYMLRSVVP----KISKMDRASILGDAIDYLKELLQRINDL 319
>sp|Q9LND0|BH089_ARATH Transcription factor bHLH89 OS=Arabidopsis
thaliana OX=3702 GN=BHLH89 PE=1 SV=1
Length=420
Score = 46.8 bits (109), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 38/106 (36%), Gaps = 12/106 (11%)
Query 20 PTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQ 79
P + S + + T+ ++ D+++ + K +
Sbjct 168 PLQPPNGSF------MGVDQDQTETNQGVNLMYDEENNNLDDGLNRKGRGSKKRKIFP-- 219
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
E+ RR +L +L+P K D+ +++ A+ ++K L
Sbjct 220 TERERRVHFKDRFGDLKNLIPNP----TKNDRASIVGEAIDYIKEL 261
>sp|Q92020|MYF6_XENLA Myogenic factor 6 OS=Xenopus laevis OX=8355
GN=myf6 PE=2 SV=1
Length=240
Score = 46.1 bits (107), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 42/90 (47%), Gaps = 3/90 (3%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ + + R+A + E+RR K+N + L T +++L K+ +LR A+ +++
Sbjct 84 KRKSAPTDRRKAATLRERRRLKKINEAFEALKRR--TVANPNQRLPKVEILRSAINYIER 141
Query 125 LRGATNPYTEANYKPTFLSDDELKHLILRA 154
L+ + + + KP ++ + A
Sbjct 142 LQDLLHSLDQQD-KPQKADEEPFSYNSKEA 170
>sp|Q18590|HLH15_CAEEL Helix-loop-helix protein 15 OS=Caenorhabditis
elegans OX=6239 GN=hlh-15 PE=2 SV=1
Length=89
Score = 43.0 bits (99), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/83 (23%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
Query 41 GSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVP 100
G T +E K + R T + R E+ R + N +L +L+P
Sbjct 7 GLDTTSEEYRKLSKAERRKRRRATPKYRNLHATR------ERIRVESFNMAFSQLRALLP 60
Query 101 TCNAMSRKLDKLTVLRMAVQHMK 123
T + +KL K+ +LR ++ ++
Sbjct 61 TL-PVEKKLSKIEILRFSIAYIS 82
>sp|Q7YS80|MYF6_BOVIN Myogenic factor 6 OS=Bos taurus OX=9913
GN=MYF6 PE=2 SV=1
Length=242
Score = 46.1 bits (107), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 39/93 (42%), Gaps = 2/93 (2%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ + + R+A + E+RR K+N + L T +++L K+ +LR A+ +++
Sbjct 86 KRKSAPTDRRKAATLRERRRLKKINEAFEALKRR--TVANPNQRLPKVEILRSAINYIER 143
Query 125 LRGATNPYTEANYKPTFLSDDELKHLILRAADG 157
L+ + + + D +G
Sbjct 144 LQDLLHRLDQQDKMQELGVDPFSYRPKQENLEG 176
>sp|Q84WK0|RSL2_ARATH Transcription factor RSL2 OS=Arabidopsis
thaliana OX=3702 GN=RSL2 PE=2 SV=1
Length=352
Score = 46.8 bits (109), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 43/114 (38%), Gaps = 7/114 (6%)
Query 24 LSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKR 83
S++ T + G D D D + + A + S ++
Sbjct 227 SSTTFCTEEESNCADQDGGGEDSSSKED---DPSKALNLNGKTRASRGAATDPQSLYARK 283
Query 84 RRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANY 137
RR+++N + L +LVP K+D T+L AV ++K L+ + +
Sbjct 284 RRERINERLRILQNLVP----NGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDL 333
>sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis
thaliana OX=3702 GN=BHLH63 PE=1 SV=1
Length=335
Score = 46.4 bits (108), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/136 (18%), Positives = 55/136 (40%), Gaps = 13/136 (10%)
Query 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK-------LDKLTVLRMAV 119
+ R A ++HS E+ RR+K++ + L LVP C+ ++ K ++ + L+ +
Sbjct 173 RARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQI 232
Query 120 QHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKIL---FVSESV 176
+ + NP + + F + + + V+ +++ + SE V
Sbjct 233 EFLSMKLAIVNPRPDFDMDDIFAKEVASTPMTV--VPSPEMVLSGYSHEMVHSGYSSEMV 290
Query 177 FK-ILNYSQNDLIGQS 191
L+ + + S
Sbjct 291 NSGYLHVNPMQQVNTS 306
>sp|Q18612|HND1_CAEEL Hand transcription factor 1 OS=Caenorhabditis
elegans OX=6239 GN=hnd-1 PE=2 SV=1
Length=226
Score = 45.7 bits (106), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK-LDKLTVLRMAV 119
+ E K+ +E + E RR +NS + L +P + RK L K+ LR+A+
Sbjct 12 VSSLESTDSKKSRKEKSREKEHRRAQCINSAFEILQQHIPYLKSEERKSLPKIKTLRLAM 71
Query 120 QHMKTLR 126
Q++ L+
Sbjct 72 QYIDHLK 78
>sp|Q8NDY6|BHE23_HUMAN Class E basic helix-loop-helix protein
23 OS=Homo sapiens OX=9606 GN=BHLHE23 PE=1 SV=1
Length=225
Score = 45.7 bits (106), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 48/120 (40%), Gaps = 4/120 (3%)
Query 17 SPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREA 76
+PGP L ++ + G + ++ + G + + R + R
Sbjct 42 TPGPGGDLPAAPAPRAPAQAAESSGEQSGDEDDAFEQRRRRRGPGSAADGRRRPREQRSL 101
Query 77 H---SQIEKRRRDKMNSFIDELASLVPTCNAMS-RKLDKLTVLRMAVQHMKTLRGATNPY 132
+ E+RR +N +D L +++P ++ S RKL K+ L +A ++ A +
Sbjct 102 RLSINARERRRMHDLNDALDGLRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAQALDEM 161
>sp|Q7SX95|MAD3_DANRE Max dimerization protein 3 OS=Danio rerio
OX=7955 GN=mxd3 PE=2 SV=1
Length=200
Score = 45.3 bits (105), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (2%)
Query 70 IKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGAT 129
N+R H+++EK RR ++ +++L VP ++ S + L +LR A H+K L+
Sbjct 55 PGNSRSVHNELEKHRRAQLRHCLEQLKQQVPL-SSDSSRNTTLNLLRQAQLHIKKLQEQD 113
Query 130 NP 131
Sbjct 114 ER 115
>sp|P24700|MYF5_XENLA Myogenic factor 5 OS=Xenopus laevis OX=8355
GN=myf5 PE=2 SV=1
Length=255
Score = 46.1 bits (107), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/125 (21%), Positives = 49/125 (39%), Gaps = 6/125 (5%)
Query 37 RKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKN----AREAHSQIEKRRRDKMNSFI 92
+ + S D L + + K+ R+A + E+RR K+N
Sbjct 44 KDLEESDEDEHVRAPIGHHQAGNCLMWACKACKRKSSTTDRRKAATMRERRRLKKVNQAF 103
Query 93 DELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLIL 152
+ L T +++L K+ +LR A+Q++++L+ E Y S E +
Sbjct 104 ETLKRC--TTTNPNQRLPKVEILRNAIQYIESLQDLLREQVENYYSLPGQSCTEPGSPMS 161
Query 153 RAADG 157
+DG
Sbjct 162 SCSDG 166
>sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis
thaliana OX=3702 GN=BHLH10 PE=1 SV=1
Length=458
Score = 46.8 bits (109), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 31/60 (52%), Gaps = 5/60 (8%)
Query 67 QGRIKNAREAH-SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
+ + +R++ S E+ RR N +L +L+P K+D+ +++ A+ ++K L
Sbjct 237 TRKGRGSRKSRTSPTERERRVHFNDRFFDLKNLIPNP----TKIDRASIVGEAIDYIKEL 292
>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis
thaliana OX=3702 GN=BHLH49 PE=1 SV=1
Length=486
Score = 46.8 bits (109), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/116 (21%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Query 38 KRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELAS 97
G ++ + DP + Y + R A +HS E+ RR+K++ + L
Sbjct 276 NSPGKKSNSGKQQGKQSSDPP-KDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQD 334
Query 98 LVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
LVP CN ++ K +L + ++++L+ + D L+ L+ +
Sbjct 335 LVPGCNKVTG---KAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAK 387
>sp|O81037|BH070_ARATH Transcription factor bHLH70 OS=Arabidopsis
thaliana OX=3702 GN=BHLH70 PE=2 SV=1
Length=371
Score = 46.4 bits (108), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/116 (21%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Query 31 SGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNS 90
RKRK + S+ T + R + T++ I++ R H +E+ RR +MN
Sbjct 152 ENARSRRKRK---NNNLASLMTREKRKRRRTKPTKNIEEIESQRMTHIAVERNRRRQMNV 208
Query 91 FIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDE 146
++ L S++P ++ ++ D+ +++ A+ +K L + E
Sbjct 209 HLNSLRSIIP--SSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQKRSQQSDDNKE 262
>sp|P19335|MYF6_RAT Myogenic factor 6 OS=Rattus norvegicus OX=10116
GN=Myf6 PE=1 SV=1
Length=242
Score = 45.7 bits (106), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ + + R+A + E+RR K+N + L T +++L K+ +LR A+ +++
Sbjct 86 KRKSAPTDRRKAATLRERRRLKKINEAFEALKRR--TVANPNQRLPKVEILRSAINYIER 143
Query 125 LRGATNPYTEANYKPTFLSDD---ELKHLILRAAD 156
L+ + + D + K IL AD
Sbjct 144 LQDLLHRLDQQEKMQELGVDPYSYKPKQEILEGAD 178
>sp|Q3YFL6|MYF6_PIG Myogenic factor 6 OS=Sus scrofa OX=9823 GN=MYF6
PE=3 SV=1
Length=242
Score = 45.7 bits (106), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 39/93 (42%), Gaps = 2/93 (2%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ + + R+A + E+RR K+N + L T +++L K+ +LR A+ +++
Sbjct 86 KRKSAPTDRRKAATLRERRRLKKINEAFEALKRR--TVANPNQRLPKVEILRSAINYIER 143
Query 125 LRGATNPYTEANYKPTFLSDDELKHLILRAADG 157
L+ + + + D +G
Sbjct 144 LQDLLHRLDQQDKMQELGVDPFSYRPKQENLEG 176
>sp|P98091|MUC19_BOVIN Mucin-19 OS=Bos taurus OX=9913 GN=MUC19
PE=2 SV=2
Length=4596
Score = 46.8 bits (109), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 48/133 (36%), Gaps = 8/133 (6%)
Query 448 GGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIH 507
G+ + P + S + S PSG P PG G AGAG G +
Sbjct 2233 SGEGSQPTVALSGATGTSAGPSGTRSSSSGIPATPGSTTGRAAGAGTPGVDSQQTARLPA 2292
Query 508 RIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILN----GGTPDIPSSGLLSGQAQENP- 562
R ++P S S+P T +S PGG + G P S G+ A
Sbjct 2293 AARTTAPGSGSSAPSG--ETSESRSSVPGGSETTQQPGAGSEPTTLSPGVTRTTALRGSE 2350
Query 563 -GYPYSDSSSILG 574
G P + S + G
Sbjct 2351 TGVPSTGVSGLPG 2363
Score = 44.9 bits (104), Expect = 0.003, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 48/133 (36%), Gaps = 8/133 (6%)
Query 448 GGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIH 507
G+ + P + S + S PSG P PG G AGAG G +
Sbjct 2891 SGEGSQPTVALSGATGTSAGPSGTRFSSSGIPATPGSTTGRAAGAGTPGVDSQQTARLPA 2950
Query 508 RIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILN----GGTPDIPSSGLLSGQAQENP- 562
R ++P S S+P T +S PGG + G P S G+ A
Sbjct 2951 AARTTAPGSGSSAPSG--ETSESRSSVPGGSETTQQPGAGSEPTTLSPGVTRTTALRGSE 3008
Query 563 -GYPYSDSSSILG 574
G P + S + G
Sbjct 3009 TGVPSTGVSGLPG 3021
Score = 44.5 bits (103), Expect = 0.004, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 48/133 (36%), Gaps = 8/133 (6%)
Query 448 GGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIH 507
G+ + P + S + S PSG P PG G AGAG G +
Sbjct 2562 SGEGSQPTVALSGATGTSAGPSGTRFSSSGIPVTPGSTTGRAAGAGTPGVDSQQTARLPA 2621
Query 508 RIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILN----GGTPDIPSSGLLSGQAQENP- 562
R ++P S S+P T +S PGG + G P S G+ A
Sbjct 2622 AARTTAPGSGSSAPSG--ETSESRSSVPGGSETTQQPGAGSEPTTLSPGVTRTTALRGSE 2679
Query 563 -GYPYSDSSSILG 574
G P + S + G
Sbjct 2680 TGVPSTGVSGLPG 2692
Score = 39.9 bits (91), Expect = 0.096, Method: Composition-based stats.
Identities = 28/118 (24%), Positives = 42/118 (36%), Gaps = 11/118 (9%)
Query 448 GGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIH 507
G+ + P + S + S PSG P PG G AGAG G +
Sbjct 1904 SGEGSQPTVALSGATGTSAGPSGTRSASSGIPATPGSTTGRAAGAGTPGVDSQQT----- 1958
Query 508 RIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNG-GTPDIPSSGLLSGQAQENPGY 564
S P++ + L ++ P +S + G T P +G S +PG
Sbjct 1959 ---ASLPAAARPTALGPGTSAPSGETSESRSSVPGGSETTQQPGAG--SESPTLSPGV 2011
>sp|Q60948|MAD4_MOUSE Max dimerization protein 4 OS=Mus musculus
OX=10090 GN=Mxd4 PE=1 SV=1
Length=209
Score = 44.9 bits (104), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query 37 RKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELA 96
R+ + + Y + D D + + + N R +H+++EK RR K+ ++++L
Sbjct 18 RRDREAEHGYASMLPFDGDFARKKTKTAGLVRKGPNNRSSHNELEKHRRAKLRLYLEQLK 77
Query 97 SLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNP 131
L P +R L++L+ A H+K L
Sbjct 78 QLGPLGPDSTRHT-TLSLLKRAKMHIKKLEEQDRR 111
>sp|P17542|TAL1_HUMAN T-cell acute lymphocytic leukemia protein
1 OS=Homo sapiens OX=9606 GN=TAL1 PE=1 SV=2
Length=331
Score = 45.7 bits (106), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/84 (24%), Positives = 36/84 (43%), Gaps = 1/84 (1%)
Query 52 TDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDK 111
+ +E T+ R + E+ R+ +N EL L+PT + +KL K
Sbjct 167 VKRRPSPYEMEITDGPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPT-HPPDKKLSK 225
Query 112 LTVLRMAVQHMKTLRGATNPYTEA 135
+LR+A++++ L N E
Sbjct 226 NEILRLAMKYINFLAKLLNDQEEE 249
>sp|Q8UW72|HE71B_XENLA Transcription factor HES-7.1-B OS=Xenopus
laevis OX=8355 GN=hes7.1-b PE=2 SV=1
Length=180
Score = 44.1 bits (102), Expect = 9e-04, Method: Composition-based stats.
Identities = 14/61 (23%), Positives = 32/61 (52%), Gaps = 9/61 (15%)
Query 75 EAHSQ-----IEKRRRDKMNSFIDELASLVPTC----NAMSRKLDKLTVLRMAVQHMKTL 125
E H + +EKRRR+++N+ +++L + + K++K +L VQ +++
Sbjct 11 ETHRKLLKPLVEKRRRERINNSLEKLRIFLSQTLKSEKLKNPKVEKAEILECTVQFLQSR 70
Query 126 R 126
+
Sbjct 71 K 71
>sp|Q6VNZ9|MYF6_DANRE Myogenic factor 6 OS=Danio rerio OX=7955
GN=myf6 PE=2 SV=1
Length=239
Score = 44.9 bits (104), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 35/75 (47%), Gaps = 4/75 (5%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDEL-ASLVPTCNAMSRKLDKLTVLRMAVQHMK 123
+ + + R+A + E+RR K+N D L VP N +L K+ +LR A+ +++
Sbjct 85 KRKSAPTDRRKAATLRERRRLKKINEAFDALKKKTVPNPNQ---RLPKVEILRSAINYIE 141
Query 124 TLRGATNPYTEANYK 138
L+ + E
Sbjct 142 KLQDLLHSLDEQEQS 156
>sp|Q8UW74|HE71A_XENLA Transcription factor HES-7.1-A OS=Xenopus
laevis OX=8355 GN=hes7.1-a PE=1 SV=1
Length=180
Score = 44.1 bits (102), Expect = 9e-04, Method: Composition-based stats.
Identities = 14/61 (23%), Positives = 33/61 (54%), Gaps = 9/61 (15%)
Query 75 EAHSQ-----IEKRRRDKMNSFIDELA----SLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
E H + +EKRRR+++N+ +++L + + + K++K +L VQ +++
Sbjct 11 ETHRKLLKPLVEKRRRERINNSLEKLRIFLFQTLKSEKLKNPKVEKAEILECTVQFLQSR 70
Query 126 R 126
+
Sbjct 71 K 71
>sp|P41894|DEI_DROME Helix-loop-helix protein delilah OS=Drosophila
melanogaster OX=7227 GN=tx PE=1 SV=3
Length=384
Score = 45.7 bits (106), Expect = 0.001, Method: Composition-based stats.
Identities = 26/148 (18%), Positives = 57/148 (39%), Gaps = 23/148 (16%)
Query 21 TDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRI---------- 70
S+ + R+++GS+ D + + D + + R
Sbjct 29 RKTASARGEKYSLRQKRQKRGSNEDGESANLADFQLELDPIAEPASKSRKNAPTKSKTKA 88
Query 71 ----KNAREAHSQIEKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQ 120
K R+ + E+ R ++N+ + L VP + KL K+T LR+A++
Sbjct 89 PPLSKYRRKTANARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKLTKITTLRLAMK 148
Query 121 HMKTLRGATNPYTEANYKPTFLSDDELK 148
++ L T+ + +Y+ F+ + +
Sbjct 149 YITML---TDSIRDPSYESEFIGECLEE 173
>sp|P24899|TAL1_CHICK T-cell acute lymphocytic leukemia protein
1 homolog OS=Gallus gallus OX=9031 GN=TAL1 PE=2 SV=1
Length=311
Score = 45.3 bits (105), Expect = 0.001, Method: Composition-based stats.
Identities = 20/84 (24%), Positives = 36/84 (43%), Gaps = 1/84 (1%)
Query 52 TDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDK 111
+ +E T+ R + E+ R+ +N EL L+PT + +KL K
Sbjct 159 VKRRPSPYEMEITDGPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPT-HPPDKKLSK 217
Query 112 LTVLRMAVQHMKTLRGATNPYTEA 135
+LR+A++++ L N E
Sbjct 218 NEILRLAMKYINFLAKLLNDQEEE 241
>sp|P79782|TCF15_CHICK Transcription factor 15 OS=Gallus gallus
OX=9031 GN=TCF15 PE=2 SV=2
Length=183
Score = 44.1 bits (102), Expect = 0.001, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 39/91 (43%), Gaps = 3/91 (3%)
Query 37 RKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIK--NAREAHSQIEKRRRDKMNSFIDE 94
+ S +D + + R + G + R+A + E+ R +N+
Sbjct 24 DEENRSESDTSDQSYGCCEGAEARRKVPRKTGPMVMVKQRQAANARERDRTQSVNTAFTA 83
Query 95 LASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
L +L+PT + RKL K+ LR+A ++ L
Sbjct 84 LRTLIPT-EPVDRKLSKIETLRLASSYIAHL 113
>sp|P52161|MAX_DANRE Protein max OS=Danio rerio OX=7955 GN=max
PE=2 SV=1
Length=165
Score = 43.7 bits (101), Expect = 0.001, Method: Composition-based stats.
Identities = 14/88 (16%), Positives = 35/88 (40%), Gaps = 3/88 (3%)
Query 50 MDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMS--- 106
M + D + + + R H+ +E++RRD + L VP
Sbjct 1 MSDNDDIEVDSDADSPRFHGVADKRAHHNALERKRRDHIKDSFHSLRDSVPALQGEKQSI 60
Query 107 RKLDKLTVLRMAVQHMKTLRGATNPYTE 134
++ + +L A ++++ +R + + +
Sbjct 61 KQASRAQILDKATEYIQYMRRKNHTHQQ 88
>sp|Q9Z304|MYCS_MOUSE Protein S-Myc OS=Mus musculus OX=10090 GN=Mycs
PE=2 SV=2
Length=431
Score = 45.7 bits (106), Expect = 0.001, Method: Composition-based stats.
Identities = 23/97 (24%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Query 36 NRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDEL 95
+K+ S T P I+ R H+++E++RRD M S L
Sbjct 313 PQKKPRSHTSLALKCVFRPKAPRLGSRNNSDWENIERRR-NHNRMERQRRDIMRSSFLNL 371
Query 96 ASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
LVP + K K+ +L+ A +++ TL+ +
Sbjct 372 RDLVPEL-VHNEKAAKVVILKKATEYIHTLQADESKL 407
>sp|Q7RTU7|SCX_HUMAN Basic helix-loop-helix transcription factor
scleraxis OS=Homo sapiens OX=9606 GN=SCX PE=1 SV=1
Length=201
Score = 44.1 bits (102), Expect = 0.001, Method: Composition-based stats.
Identities = 25/110 (23%), Positives = 42/110 (38%), Gaps = 1/110 (1%)
Query 16 MSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNARE 75
+SP D S + + + + Q + G GR R
Sbjct 19 VSPLSEDEDRGSDSSGSDEKPCRVHAARCGLQGARRRAGGRRAGGGGPGGRPGREPRQRH 78
Query 76 AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
+ E+ R + +N+ L +L+PT A RKL K+ LR+A ++ L
Sbjct 79 TANARERDRTNSVNTAFTALRTLIPTEPAD-RKLSKIETLRLASSYISHL 127
>sp|O73823|TAL1_XENLA T-cell acute lymphocytic leukemia protein
1 OS=Xenopus laevis OX=8355 GN=tal1 PE=2 SV=1
Length=394
Score = 45.3 bits (105), Expect = 0.001, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
+E +E R + E+ R+ +N EL L+PT + +KL K +LR
Sbjct 247 GPIEVEISEGPQPKVVRRIFTNSRERWRQQNVNGAFAELRKLIPT-HPPDKKLSKNEILR 305
Query 117 MAVQHMKTLRGATNPYTEA 135
+A++++ L + E
Sbjct 306 LAMKYINFLAKLLDDQEEE 324
>sp|Q8H102|BH128_ARATH Transcription factor bHLH128 OS=Arabidopsis
thaliana OX=3702 GN=BHLH128 PE=1 SV=1
Length=362
Score = 45.3 bits (105), Expect = 0.001, Method: Composition-based stats.
Identities = 26/125 (21%), Positives = 49/125 (39%), Gaps = 13/125 (10%)
Query 22 DLLSSSLGTSGVDCNRKRKGSSTD--------YQESMDTDKDDPHGRLEYTEHQGRIKNA 73
D S S+G + +++ K + SM+ + + + R K
Sbjct 229 DDGSGSIGFTVTRPSKRSKDMDSGLFSQYSLPSDTSMNYMDNFMQLPEDSVPCKIRAKRG 288
Query 74 REAH--SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNP 131
H S E+ RR +++ + +L LVP + + D +L +AVQH+K L+
Sbjct 289 CATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSD---MLDLAVQHIKGLQHQLQN 345
Query 132 YTEAN 136
+
Sbjct 346 LKKDQ 350
>sp|Q3EAI1|BH060_ARATH Transcription factor bHLH60 OS=Arabidopsis
thaliana OX=3702 GN=BHLH60 PE=1 SV=1
Length=426
Score = 45.3 bits (105), Expect = 0.001, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 36/85 (42%), Gaps = 0/85 (0%)
Query 30 TSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMN 89
+++ + + + +L Y + R A ++HS E+ RR+K+N
Sbjct 168 NQNNRNGKRKDFEKKGKSSTKKNKSSEENEKLPYVHVRARRGQATDSHSLAERARREKIN 227
Query 90 SFIDELASLVPTCNAMSRKLDKLTV 114
+ + L LVP C+ + K+ +
Sbjct 228 ARMKLLQELVPGCDKGTDFGGKIKI 252
>sp|P10083|AST5_DROME Achaete-scute complex protein T5 OS=Drosophila
melanogaster OX=7227 GN=ac PE=1 SV=1
Length=201
Score = 44.1 bits (102), Expect = 0.001, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 34/91 (37%), Gaps = 14/91 (15%)
Query 50 MDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRR-DKMNSFIDELASLVPTC------ 102
M ++ + E +R R ++N+ +L +P
Sbjct 1 MALGSENHSVFNDDEESSSAFNGPSVIRRNARERNRVKQVNNGFSQLRQHIPAAVIADLS 60
Query 103 -------NAMSRKLDKLTVLRMAVQHMKTLR 126
++KL K++ L+MAV++++ L+
Sbjct 61 NGRRGIGPGANKKLSKVSTLKMAVEYIRRLQ 91
>sp|P22091|TAL1_MOUSE T-cell acute lymphocytic leukemia protein
1 homolog OS=Mus musculus OX=10090 GN=Tal1 PE=1 SV=1
Length=329
Score = 44.9 bits (104), Expect = 0.001, Method: Composition-based stats.
Identities = 19/92 (21%), Positives = 36/92 (39%), Gaps = 4/92 (4%)
Query 52 TDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDK 111
+ +E ++ R + E+ R+ +N EL L+PT + +KL K
Sbjct 167 VKRRPSPYEMEISDGPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPT-HPPDKKLSK 225
Query 112 LTVLRMAVQHM---KTLRGATNPYTEANYKPT 140
+LR+A++++ L KP
Sbjct 226 NEILRLAMKYINFLAKLLNDQEEEGTQRAKPG 257
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis
thaliana OX=3702 GN=BHLH87 PE=1 SV=1
Length=373
Score = 45.3 bits (105), Expect = 0.001, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 40/112 (36%), Gaps = 10/112 (9%)
Query 27 SLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYT------EHQGRIKNAREAHSQI 80
S S + + Q + + + + +K + + +
Sbjct 224 SFQHSTCLSDNVEPDAEAIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVA 283
Query 81 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
++RR++++ I L +LVP K+D ++L A ++K LR
Sbjct 284 ARQRRERISEKIRVLQTLVP----GGTKMDTASMLDEAANYLKFLRAQVKAL 331
>sp|Q9M1K0|ORG3_ARATH Transcription factor ORG3 OS=Arabidopsis
thaliana OX=3702 GN=ORG3 PE=1 SV=1
Length=258
Score = 44.5 bits (103), Expect = 0.002, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 1/56 (2%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
+ H+ E+ RR K+NS L S +P + S+KL + +++++ L+
Sbjct 77 KKLNHNASERDRRRKINSLFSSLRSCLPA-SGQSKKLSIPATVSRSLKYIPELQEQ 131
>sp|Q9C690|BH122_ARATH Transcription factor bHLH122 OS=Arabidopsis
thaliana OX=3702 GN=BHLH122 PE=1 SV=1
Length=379
Score = 44.9 bits (104), Expect = 0.002, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 54/160 (34%), Gaps = 33/160 (21%)
Query 7 DISSTISDFMSPGPTDLLSS---SLGTSGVDCNRKRKGSSTDY---QESMDTDKDDPHGR 60
D+ S + P L S G G ++ + T + D+D R
Sbjct 219 DVKPGFSSRLPP--RTLSGGFNRSFGNEGSASSKLTALARTQSGGLDQYKTKDEDSASRR 276
Query 61 LEYTEHQG------------------RIKNAR----EAHSQIEKRRRDKMNSFIDELASL 98
H +I+ R S E+ RR K++ + +L L
Sbjct 277 PPLAHHMSLPKSLSDIEQLLSDSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDL 336
Query 99 VPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYK 138
VP + + D +L +AVQ++K L+ E+ +
Sbjct 337 VPNMDTQTNTAD---MLDLAVQYIKDLQEQVKALEESRAR 373
>sp|Q8L467|BH104_ARATH Transcription factor bHLH104 OS=Arabidopsis
thaliana OX=3702 GN=BHLH104 PE=1 SV=1
Length=283
Score = 44.5 bits (103), Expect = 0.002, Method: Composition-based stats.
Identities = 26/98 (27%), Positives = 40/98 (41%), Gaps = 8/98 (8%)
Query 41 GSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVP 100
G+ + QE +D D R G K R E+ RR+K+N +L+S++
Sbjct 105 GAVKEEQEHLDDDCSRKRARTGSCSRGGGTKACR------ERLRREKLNERFMDLSSVLE 158
Query 101 TCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYK 138
K DK +L A++ + LR E N K
Sbjct 159 PGRTP--KTDKPAILDDAIRILNQLRDEALKLEETNQK 194
>sp|Q9M041|BH140_ARATH Transcription factor bHLH140 OS=Arabidopsis
thaliana OX=3702 GN=BHLH140 PE=3 SV=1
Length=912
Score = 45.7 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 16/71 (23%), Positives = 30/71 (42%), Gaps = 11/71 (15%)
Query 65 EHQGRIKNAREAH-------SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRM 117
G K +R S + RR +++ L S+VP K+D +++L
Sbjct 29 SETGNTKRSRSTSTLSTDPQSVAARDRRHRISDRFKILQSMVP----GGAKMDTVSMLDE 84
Query 118 AVQHMKTLRGA 128
A+ ++K L+
Sbjct 85 AISYVKFLKAQ 95
>sp|A2T713|TFEC_PANTR Transcription factor EC OS=Pan troglodytes
OX=9598 GN=TFEC PE=3 SV=1
Length=347
Score = 44.9 bits (104), Expect = 0.002, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 60/143 (42%), Gaps = 7/143 (5%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
++ D + +S D+ S G S ++ +S M + + R
Sbjct 75 FKEEGADSPLLMQRTLSGSILDVYSGEQGISPINMGLTS--ASCPSSLPMKREITETDTR 132
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
E Q ++ H+ IE+RRR +N I EL +L+P N + +K T+L+ +V+
Sbjct 133 ALAKERQ-----KKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVE 187
Query 121 HMKTLRGATNPYTEANYKPTFLS 143
++K L+ E ++ L
Sbjct 188 YIKWLQKEQQRARELEHRQKKLE 210
>sp|A2T7L8|TFEC_PONPY Transcription factor EC OS=Pongo pygmaeus
OX=9600 GN=TFEC PE=3 SV=1
Length=347
Score = 44.5 bits (103), Expect = 0.002, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 60/143 (42%), Gaps = 7/143 (5%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
++ D + +S D+ S G S ++ +S M + + R
Sbjct 75 FKEEGADSPLLMQRTLSGSILDVYSGEQGISPINMGLTS--ASCPSSLPMKREITETDTR 132
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
E Q ++ H+ IE+RRR +N I EL +L+P N + +K T+L+ +V+
Sbjct 133 ALAKERQ-----KKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVE 187
Query 121 HMKTLRGATNPYTEANYKPTFLS 143
++K L+ E ++ L
Sbjct 188 YIKWLQKEQQRARELEHRQKKLE 210
>sp|O14948|TFEC_HUMAN Transcription factor EC OS=Homo sapiens
OX=9606 GN=TFEC PE=1 SV=1
Length=347
Score = 44.5 bits (103), Expect = 0.002, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 60/143 (42%), Gaps = 7/143 (5%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
++ D + +S D+ S G S ++ +S M + + R
Sbjct 75 FKEEGADSPLLMQRTLSGSILDVYSGEQGISPINMGLTS--ASCPSSLPMKREITETDTR 132
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
E Q ++ H+ IE+RRR +N I EL +L+P N + +K T+L+ +V+
Sbjct 133 ALAKERQ-----KKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVE 187
Query 121 HMKTLRGATNPYTEANYKPTFLS 143
++K L+ E ++ L
Sbjct 188 YIKWLQKEQQRARELEHRQKKLE 210
>sp|P15173|MYOG_HUMAN Myogenin OS=Homo sapiens OX=9606 GN=MYOG
PE=1 SV=2
Length=224
Score = 43.7 bits (101), Expect = 0.002, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 41/108 (38%), Gaps = 2/108 (2%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
R A + EKRR K+N + L T +++L K+ +LR A+Q+++ L+ +
Sbjct 82 RRRAATLREKRRLKKVNEAFEALKR--STLLNPNQRLPKVEILRSAIQYIERLQALLSSL 139
Query 133 TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
+ + + + + G L S + L
Sbjct 140 NQEERDLRYRGGGGPQPGVPSECSSHSASCSPEWGSALEFSANPGDHL 187
>sp|Q9SK91|BH094_ARATH Transcription factor bHLH94 OS=Arabidopsis
thaliana OX=3702 GN=BHLH94 PE=1 SV=2
Length=304
Score = 44.5 bits (103), Expect = 0.002, Method: Composition-based stats.
Identities = 17/59 (29%), Positives = 37/59 (63%), Gaps = 2/59 (3%)
Query 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
+ I+N R H +E+ RR +MN ++ L SL+P ++ +++ D+ +++ A+ ++K L
Sbjct 107 KEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMP--SSYAQRGDQASIVGGAINYVKEL 163
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis
thaliana OX=3702 GN=BHLH91 PE=2 SV=1
Length=428
Score = 44.9 bits (104), Expect = 0.002, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 47/114 (41%), Gaps = 7/114 (6%)
Query 16 MSPGPTDLLSSSLGTS--GVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNA 73
+ P P + S+ G+D N + ++ + + + D E + + +
Sbjct 151 LPPQPPLIPSNDYSGYLLGIDTNTTTQRDESNVGDENNNAQFDSGIIEFSKEIRRKGRGK 210
Query 74 RE-AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
R+ E+ RR +N + L L+P+ K D+ ++L+ + ++ LR
Sbjct 211 RKNKPFTTERERRCHLNERYEALKLLIPSP----SKGDRASILQDGIDYINELR 260
>sp|Q96RG2|PASK_HUMAN PAS domain-containing serine/threonine-protein
kinase OS=Homo sapiens OX=9606 GN=PASK PE=1 SV=3
Length=1323
Score = 45.3 bits (105), Expect = 0.002, Method: Composition-based stats.
Identities = 27/181 (15%), Positives = 52/181 (29%), Gaps = 12/181 (7%)
Query 225 GLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIH- 283
LP+ ++ + RSF + + + S + + S+C
Sbjct 19 SLPLPVSAEGPAAQTTAEPSRSFSSAHR-HLSRRNGLSRLCQSRTALSEDRWSSYCLSSL 77
Query 284 -----STGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSM 338
T K P + +EP G C + G P
Sbjct 78 AAQNICTS--KLHCPAAPEHTDPSEP--RGSVSCCSLLRGLSSGWSSPLLPAPVCNPNKA 133
Query 339 EYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREK 398
+ V D +A +L Y Q+L+G ++F + D + + ++
Sbjct 134 IFTVDAKTTEILVAND-KACGLLGYSSQDLIGQKLTQFFLRSDSDVVEALSEEHMEADGH 192
Query 399 I 399
Sbjct 193 A 193
>sp|Q8GWK7|BEE3_ARATH Transcription factor BEE 3 OS=Arabidopsis
thaliana OX=3702 GN=BEE3 PE=2 SV=1
Length=261
Score = 44.1 bits (102), Expect = 0.002, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 60/154 (39%), Gaps = 8/154 (5%)
Query 27 SLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRD 86
S ++ V N + + + + E + R A ++HS E+ RR
Sbjct 108 STSSAQVSINGNISTKNNSSRRGKRSKNREEEKEREVVHVRARRGQATDSHSIAERVRRG 167
Query 87 KMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN----PYTEANYKPTFL 142
K+N + L +VP C + + T+L + ++++L+ T A+ F
Sbjct 168 KINERLKCLQDIVPGCY---KTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFN 224
Query 143 SDDELKHLILRA-ADGFLFVVGCDRGKILFVSES 175
S+ + + +A A + + G +F S S
Sbjct 225 SETDAVESMQKAKAREAVEMGQGRDGSSVFHSSS 258
>sp|Q9C707|RHD6_ARATH Transcription factor RHD6 OS=Arabidopsis
thaliana OX=3702 GN=RHD6 PE=1 SV=1
Length=298
Score = 44.1 bits (102), Expect = 0.002, Method: Composition-based stats.
Identities = 30/159 (19%), Positives = 53/159 (33%), Gaps = 9/159 (6%)
Query 3 DQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLE 62
MDI S S G D L S + + + T + +
Sbjct 127 QHHMDIISPRSTETPQGQKDWLYSDSTVVTTGSRNESLSPKSAGNKRSHTGESTQPSKKL 186
Query 63 YTEHQGRIKNA-----REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRM 117
+ G+ K ++ S K RR++++ + L LVP K+D +T+L
Sbjct 187 SSGVTGKTKPKPTTSPKDPQSLAAKNRRERISERLKILQELVP----NGTKVDLVTMLEK 242
Query 118 AVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAAD 156
A+ ++K L+ + P + A D
Sbjct 243 AISYVKFLQVQVKVLATDEFWPAQGGKAPDISQVKDAID 281
>sp|Q96SQ7|ATOH8_HUMAN Transcription factor ATOH8 OS=Homo sapiens
OX=9606 GN=ATOH8 PE=1 SV=2
Length=321
Score = 44.5 bits (103), Expect = 0.002, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 50/129 (39%), Gaps = 8/129 (6%)
Query 17 SPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREA 76
+P SS S V N + S++ K +E + + R
Sbjct 182 APPTRPGESSYSSISHVIYNNHQDSSASPR-------KRPGEATAASSEIKALQQTRRLL 234
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEAN 136
+ E+ R +++ + L VP C + +KL KL +LR+A ++ +L + A+
Sbjct 235 ANARERTRVHTISAAFEALRKQVP-CYSYGQKLSKLAILRIACNYILSLARLADLDYSAD 293
Query 137 YKPTFLSDD 145
+ S+
Sbjct 294 HSNLSFSEC 302
>sp|Q8GZ13|BEE1_ARATH Transcription factor BEE 1 OS=Arabidopsis
thaliana OX=3702 GN=BEE1 PE=1 SV=1
Length=260
Score = 44.1 bits (102), Expect = 0.002, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%)
Query 23 LLSSSLGTSGVDCNRK----RKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHS 78
SS TSGV N GS + +++ E + R A ++HS
Sbjct 98 PTLSSSETSGVSDNTNVIATETGSLRRGKRLKKKKEEEDEKEREVVHVRARRGQATDSHS 157
Query 79 QIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
E+ RR K+N + L +VP C + T+L + ++++L+
Sbjct 158 LAERVRRGKINERLRCLQDMVPGCYKA---MGMATMLDEIINYVQSLQNQVE 206
>sp|Q68DE3|USF3_HUMAN Basic helix-loop-helix domain-containing
protein USF3 OS=Homo sapiens OX=9606 GN=USF3 PE=1 SV=4
Length=2245
Score = 44.9 bits (104), Expect = 0.002, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 2/74 (3%)
Query 59 GRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMA 118
E + K RE H+ +E+ R+ K+N+ I+ + L+P A+ K K +L A
Sbjct 5 TENETPTKKQHRKKNRETHNAVERHRKKKINAGINRIGELIPCSPAL--KQSKNMILDQA 62
Query 119 VQHMKTLRGATNPY 132
+++ L+ +
Sbjct 63 FKYITELKRQNDEL 76
>sp|Q64221|HEN2_MOUSE Helix-loop-helix protein 2 OS=Mus musculus
OX=10090 GN=Nhlh2 PE=1 SV=2
Length=135
Score = 41.8 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query 76 AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
AH+ E+ R + N EL L+PT KL K+ +LR+A+ ++ L
Sbjct 81 AHATRERIRVEAFNLAFAELRKLLPTLPPDK-KLSKIEILRLAICYISYL 129
>sp|Q02577|HEN2_HUMAN Helix-loop-helix protein 2 OS=Homo sapiens
OX=9606 GN=NHLH2 PE=1 SV=1
Length=135
Score = 41.8 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query 76 AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
AH+ E+ R + N EL L+PT KL K+ +LR+A+ ++ L
Sbjct 81 AHATRERIRVEAFNLAFAELRKLLPTLPPDK-KLSKIEILRLAICYISYL 129
>sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis
thaliana OX=3702 GN=BHLH96 PE=1 SV=1
Length=320
Score = 43.7 bits (101), Expect = 0.003, Method: Composition-based stats.
Identities = 24/106 (23%), Positives = 45/106 (42%), Gaps = 11/106 (10%)
Query 20 PTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQ 79
P DL S VD + S + + + I+N R H
Sbjct 79 PRDLPYGSA----VDTESQPPPSDVAAGGGRRKRRRTRSSKN-----KEEIENQRMTHIA 129
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
+E+ RR +MN ++ L SL+P +++ D+ +++ A+ ++K L
Sbjct 130 VERNRRKQMNEYLAVLRSLMPP--YYAQRGDQASIVGGAINYLKEL 173
>sp|Q0V9X5|BHE22_XENTR Class E basic helix-loop-helix protein
22 OS=Xenopus tropicalis OX=8364 GN=bhlhe22 PE=2 SV=1
Length=296
Score = 43.7 bits (101), Expect = 0.003, Method: Composition-based stats.
Identities = 24/123 (20%), Positives = 45/123 (37%), Gaps = 9/123 (7%)
Query 17 SPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREA 76
S G + SS G + + +++ G K ++E
Sbjct 94 SAGRVSVAESSGGEEQ--SPDDDSDGRCELVLRSAEHRAQAGLKVDAPCATGGGKKSKEQ 151
Query 77 H------SQIEKRRRDKMNSFIDELASLVPTCNAMS-RKLDKLTVLRMAVQHMKTLRGAT 129
+ E+RR +N +DEL +++P ++ S RKL K+ L +A ++ A
Sbjct 152 RTLRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAQAL 211
Query 130 NPY 132
Sbjct 212 EEM 214
>sp|Q7XAQ6|LAX1_ORYSJ Transcription factor LAX PANICLE 1 OS=Oryza
sativa subsp. japonica OX=39947 GN=LAX1 PE=1 SV=1
Length=215
Score = 43.0 bits (99), Expect = 0.003, Method: Composition-based stats.
Identities = 16/68 (24%), Positives = 32/68 (47%), Gaps = 4/68 (6%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
K + + S + RR +++ L SLVP K+D +++L A+ ++K L+
Sbjct 39 KLSTDPQSVAARERRHRISDRFRVLRSLVP----GGSKMDTVSMLEQAIHYVKFLKAQVT 94
Query 131 PYTEANYK 138
+ A +
Sbjct 95 LHQAALVQ 102
>sp|P12979|MYOG_MOUSE Myogenin OS=Mus musculus OX=10090 GN=Myog
PE=1 SV=2
Length=224
Score = 43.4 bits (100), Expect = 0.003, Method: Composition-based stats.
Identities = 20/108 (19%), Positives = 42/108 (39%), Gaps = 2/108 (2%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
R A + EKRR K+N + L T +++L K+ +LR A+Q+++ L+ +
Sbjct 82 RRRAATLREKRRLKKVNEAFEALKR--STLLNPNQRLPKVEILRSAIQYIERLQALLSSL 139
Query 133 TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
+ + + ++ + + G L + L
Sbjct 140 NQEERDLRYRGGGGPQPMVPSECNSHSASCSPEWGNALEFGPNPGDHL 187
>sp|Q700C7|SPCH_ARATH Transcription factor SPEECHLESS OS=Arabidopsis
thaliana OX=3702 GN=SPCH PE=1 SV=1
Length=364
Score = 43.7 bits (101), Expect = 0.003, Method: Composition-based stats.
Identities = 22/141 (16%), Positives = 53/141 (38%), Gaps = 12/141 (9%)
Query 7 DISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEH 66
+IS T + T ++ V S ++ ++T K++ +
Sbjct 36 EISPTAAS------TPKDGTTSSKELVKDQDYENSSPKRKKQRLETRKEEDEEEEDGDGE 89
Query 67 Q----GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
+ + +H +E+ RR +MN + L SL+P ++ D+ +++ V+++
Sbjct 90 AEEDNKQDGQQKMSHVTVERNRRKQMNEHLTVLRSLMPC--FYVKRGDQASIIGGVVEYI 147
Query 123 KTLRGATNPYTEANYKPTFLS 143
L+ + T+
Sbjct 148 SELQQVLQSLEAKKQRKTYAE 168
>sp|A0A0P0WQ90|LF_ORYSJ Transcription factor LATE FLOWERING OS=Oryza
sativa subsp. japonica OX=39947 GN=LF PE=1 SV=1
Length=416
Score = 44.1 bits (102), Expect = 0.003, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 4/67 (6%)
Query 68 GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
++ + + + + RR++++ + L LVP K+D T+L A ++K L+
Sbjct 299 KNVRISSDPQTVAARLRRERVSERLRVLQRLVP----GGSKMDTATMLDEAASYLKFLKS 354
Query 128 ATNPYTE 134
Sbjct 355 QLEALET 361
>sp|Q0WNR2|BH090_ARATH Transcription factor bHLH90 OS=Arabidopsis
thaliana OX=3702 GN=BHLH90 PE=1 SV=1
Length=441
Score = 44.1 bits (102), Expect = 0.003, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 30/55 (55%), Gaps = 4/55 (7%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
+N + + E++RR+++N + L ++VP KL+K+ + AV ++ L
Sbjct 259 ENFKSKNLHSERKRRERINQAMYGLRAVVP----KITKLNKIGIFSDAVDYINEL 309
>sp|Q9FJ00|RSL1_ARATH Putative transcription factor bHLH086 OS=Arabidopsis
thaliana OX=3702 GN=RSL1 PE=1 SV=2
Length=307
Score = 43.7 bits (101), Expect = 0.003, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 42/121 (35%), Gaps = 9/121 (7%)
Query 36 NRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDEL 95
KR + + Q S P + ++ S K RR++++ + L
Sbjct 176 GNKRPFTGENTQLS-----KKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVL 230
Query 96 ASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAA 155
LVP K+D +T+L A+ ++K L+ + P + A
Sbjct 231 QELVP----NGTKVDLVTMLEKAIGYVKFLQVQVKVLAADEFWPAQGGKAPDISQVKEAI 286
Query 156 D 156
D
Sbjct 287 D 287
>sp|P01110|MYC_AVIMC Viral myc transforming protein OS=Avian myelocytomatosis
virus 29 OX=11868 GN=MYC PE=3 SV=2
Length=416
Score = 43.7 bits (101), Expect = 0.004, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 40/87 (46%), Gaps = 2/87 (2%)
Query 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
+ R H+ +E++RR+++ L +P A + K K+ +L+ A +++ +L+
Sbjct 326 DSEENDKRRTHNVLERQRRNELKLRFFALRDQIPEV-ANNEKAPKVVILKKATEYVLSLQ 384
Query 127 GATNPYTEANYKPTFLSDDELKHLILR 153
+ + ++LKH + +
Sbjct 385 SDEHKLIAEK-EQLRRRREQLKHNLEQ 410
>sp|Q9ZW81|BH129_ARATH Transcription factor bHLH129 OS=Arabidopsis
thaliana OX=3702 GN=BHLH129 PE=3 SV=2
Length=297
Score = 43.4 bits (100), Expect = 0.004, Method: Composition-based stats.
Identities = 27/137 (20%), Positives = 51/137 (37%), Gaps = 20/137 (15%)
Query 11 TISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQE--SMDTDKDDPHGRLEYTEHQG 68
S MS G + +S + + G + + +++T P LE +
Sbjct 161 VASSSMSFGNNRTNNWDNSSSHISFTIDQPGKRSKNSDFFTLETQYSMPQTTLEMATMEN 220
Query 69 -----------RIKNAR----EAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT 113
R + R S E+ RR +++ + +L LVP M ++
Sbjct 221 LMNIPEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVP---NMDKQTSYAD 277
Query 114 VLRMAVQHMKTLRGATN 130
+L +AV+H+K L+
Sbjct 278 MLDLAVEHIKGLQHQVE 294
>sp|Q9GNV2|TWIST_PODCA Twist-related protein OS=Podocoryna carnea
OX=6096 GN=TWIST PE=2 SV=1
Length=199
Score = 42.6 bits (98), Expect = 0.004, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 47/121 (39%), Gaps = 7/121 (6%)
Query 31 SGVDCNRKRKGSSTDYQES-MDTDKDDPHGRLEYTEHQGRI--KNAREAHSQIEKRRRDK 87
S V K+K S D + K D +LE + I K R + E++R
Sbjct 7 SRVTSGNKKKYQSFDDESRDEKRMKCDSTDKLESNSNSKNIYQKTHRVIANIRERQRTQA 66
Query 88 MNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA--NYKPTFLSDD 145
+N L ++PT S KL K+ LR+A ++ LR + TF S
Sbjct 67 LNQSFSTLRKIIPT--LPSDKLSKIQTLRLAAMYIDFLRHVIRRGEINMDSSDETFFSAQ 124
Query 146 E 146
E
Sbjct 125 E 125
>sp|P06295|MYC_AVIMD Viral myc transforming protein OS=Avian myelocytomatosis
virus HBI OX=11915 GN=MYC PE=3 SV=2
Length=416
Score = 43.7 bits (101), Expect = 0.004, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 40/87 (46%), Gaps = 2/87 (2%)
Query 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
+ R H+ +E++RR+++ L +P A + K K+ +L+ A +++ +++
Sbjct 326 DSEENDKRRTHNVLERQRRNELKLRFFALRDQIPEV-ANNEKAPKVGILKKATEYVLSIQ 384
Query 127 GATNPYTEANYKPTFLSDDELKHLILR 153
+ + ++LKH + +
Sbjct 385 SDEHRLIAEK-EQLRRRREQLKHNLEQ 410
>sp|Q66GR3|BH130_ARATH Transcription factor bHLH130 OS=Arabidopsis
thaliana OX=3702 GN=BHLH130 PE=1 SV=1
Length=359
Score = 43.7 bits (101), Expect = 0.004, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query 40 KGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREA---HSQIEKRRRDKMNSFIDELA 96
SS+ + + DK + +L+ + A S E+ RR +++ + +L
Sbjct 253 PKSSSTASDMVSVDK---YLQLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQ 309
Query 97 SLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
LVP + + D +L +AV ++K L+
Sbjct 310 ELVPNMDKQTNTSD---MLDLAVDYIKDLQ 336
>sp|Q0JFZ0|IRO2_ORYSJ Protein IRON-RELATED TRANSCRIPTION FACTOR
2 OS=Oryza sativa subsp. japonica OX=39947 GN=IRO2 PE=1 SV=1
Length=247
Score = 43.0 bits (99), Expect = 0.004, Method: Composition-based stats.
Identities = 17/87 (20%), Positives = 37/87 (43%), Gaps = 8/87 (9%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCN--------AMSRKLDKLTVLRMAVQHMKT 124
+ +H+ E+ RR ++N L +L+P + +SR L + L+ V++++
Sbjct 69 RKLSHNAYERDRRKQLNELYSSLRALLPDADHTKLSIPTTVSRVLKYIPELQKQVENLER 128
Query 125 LRGATNPYTEANYKPTFLSDDELKHLI 151
+ + N KP L + +
Sbjct 129 KKKELTTTSTTNCKPGVLGSQLMSEGM 155
>sp|Q9STJ7|BH118_ARATH Transcription factor bHLH118 OS=Arabidopsis
thaliana OX=3702 GN=BHLH118 PE=2 SV=1
Length=163
Score = 42.2 bits (97), Expect = 0.004, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 60/154 (39%), Gaps = 32/154 (21%)
Query 77 HSQIEKRRRDKMNSFIDELASLVPT---------CNAMSRKLDKLTVLRMAVQHMKTLRG 127
H +IEKRRR +M S L SL+P + + ++ + L+ ++ + + R
Sbjct 6 HKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDINSKRD 65
Query 128 ATNPYTEANYKPTFLSDDELKHL------------------ILRAADGFLFVVGCDRGKI 169
+ +++ + ++ E + IL+ + V + G
Sbjct 66 DLVLLSGRSFRSS--NEQEWNEISNHVVIRPCLVGIEIVLSILQTPFSSVLQVLREHGLY 123
Query 170 L--FVSESVFKILNYS-QNDLIGQSLFDYLHPKD 200
+ ++ SV L ++ Q ++ +L D KD
Sbjct 124 VLGYICSSVNDRLIHTLQAEVNDLALIDLADLKD 157
>sp|Q9CA64|PRE3_ARATH Transcription factor PRE3 OS=Arabidopsis
thaliana OX=3702 GN=PRE3 PE=1 SV=1
Length=93
Score = 40.3 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 18/73 (25%), Positives = 32/73 (44%), Gaps = 4/73 (5%)
Query 86 DKMNSFIDELASLVPTCNAMSRKLDKLT---VLRMAVQHMKTLRGATNPYTEANYKPTFL 142
D++N I +L L+P SR+ DK++ VL+ +++ L + +E +
Sbjct 20 DQINDLIIKLQQLLPELRD-SRRSDKVSAARVLQDTCNYIRNLHREVDDLSERLSELLAN 78
Query 143 SDDELKHLILRAA 155
SD LI
Sbjct 79 SDTAQAALIRSLL 91
>sp|P55552|Y4LL_SINFN Uncharacterized protein y4lL OS=Sinorhizobium
fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a02630
PE=4 SV=1
Length=827
Score = 44.1 bits (102), Expect = 0.004, Method: Composition-based stats.
Identities = 40/263 (15%), Positives = 82/263 (31%), Gaps = 55/263 (21%)
Query 160 FVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERL 219
+V + + LF++++ ++ ++ DLIG + +D L + + ++ + E
Sbjct 27 IIVKDEHFRFLFLNDAACMLVGRARCDLIGHTDYDILPTAEADRYRDMDIGVLSTGEEVS 86
Query 220 IDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSF 279
++ +P R R S + + S
Sbjct 87 VEEPIAVPGGE------------------VRRLVTRKSRAILTRGSSSE----------- 117
Query 280 CTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSME 339
K + + E C A L + V E+ +
Sbjct 118 ---------KVIVAIALDVTE------------CRTAEAALQASVEHHRSLTELHPQVPW 156
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKI 399
G+ + + R Y P+E LG + H DD+G + + L T E +
Sbjct 157 ---TADPSGEVLEIGPR-WEKTGYAPKEALGAGWAKAMHPDDLGEVQREWAKSLATGEPL 212
Query 400 TTNCYKFKIKDGSFITLRSRWFS 422
++ +G + RSR +
Sbjct 213 DVE-FRLAAAEGGYSWYRSRAAT 234
>sp|D2CLZ9|ATOH8_DANRE Transcription factor atoh8 OS=Danio rerio
OX=7955 GN=atoh8 PE=2 SV=1
Length=266
Score = 43.4 bits (100), Expect = 0.004, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 46/121 (38%), Gaps = 17/121 (14%)
Query 29 GTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKM 88
G+ + RKR G + TE + + R + E+ R +
Sbjct 148 GSERAESPRKRAGEPSGV----------------VTEIKAIQQTRRLLANARERTRVHTI 191
Query 89 NSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELK 148
++ + L VP C + +KL KL +LR+A ++ +L + +++ + +
Sbjct 192 SAAFEALRKQVP-CYSYGQKLSKLAILRIACNYILSLAQLADLDYTPDHRNMSFRECVEQ 250
Query 149 H 149
Sbjct 251 C 251
>sp|Q99NA2|ATOH8_MOUSE Transcription factor Atoh8 OS=Mus musculus
OX=10090 GN=Atoh8 PE=1 SV=1
Length=322
Score = 43.4 bits (100), Expect = 0.004, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 49/133 (37%), Gaps = 8/133 (6%)
Query 13 SDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKN 72
+P SS S V N S++ K TE + +
Sbjct 179 PVRPAPPTRPGESSYSSISHVIYNNHPDSSASPR-------KRPGEATAASTEIKALQQT 231
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
R + E+ R +++ + L VP C + +KL KL +LR+A ++ +L +
Sbjct 232 RRLLANARERTRVHTISAAFEALRKQVP-CYSYGQKLSKLAILRIACNYILSLARLADLD 290
Query 133 TEANYKPTFLSDD 145
A++ S+
Sbjct 291 YSADHSNLSFSEC 303
>sp|A1YG22|MYC_PANPA Myc proto-oncogene protein OS=Pan paniscus
OX=9597 GN=MYC PE=3 SV=1
Length=439
Score = 43.7 bits (101), Expect = 0.004, Method: Composition-based stats.
Identities = 17/97 (18%), Positives = 39/97 (40%), Gaps = 6/97 (6%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
R TE + R H+ +E++RR+++ L +P + K K+ +L+
Sbjct 343 TSPRSSDTEENDK----RRTHNVLERQRRNELKRSFFALRDQIPELEN-NEKAPKVVILK 397
Query 117 MAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
A ++ +++ ++LKH + +
Sbjct 398 KATAYILSVQAEEQKLISEE-DLLRKRREQLKHKLEQ 433
>sp|Q95XG7|NGN1_CAEEL Helix-loop-helix protein ngn-1 OS=Caenorhabditis
elegans OX=6239 GN=ngn-1 PE=1 SV=1
Length=184
Score = 42.2 bits (97), Expect = 0.004, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 46/120 (38%), Gaps = 2/120 (2%)
Query 20 PTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKN-AREAHS 78
P L + N + S Q+ + +K R R K R+ +
Sbjct 9 PHHLQTGEQDLDMERENDMDQNSKNSTQKPVKREKRRYRCRKRSPATIERAKTVRRDKAN 68
Query 79 QIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYK 138
E+RR + +N ++ L ++P K+ K+ LR A +++ +L + + + +
Sbjct 69 ARERRRMNSLNDALEHLRGILPALPDEP-KMTKIETLRKAQEYIASLSFQLSGGSPDSSQ 127
>sp|P23583|MYC_PANTR Myc proto-oncogene protein OS=Pan troglodytes
OX=9598 GN=MYC PE=3 SV=2
Length=454
Score = 43.7 bits (101), Expect = 0.004, Method: Composition-based stats.
Identities = 17/97 (18%), Positives = 39/97 (40%), Gaps = 6/97 (6%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
R TE + R H+ +E++RR+++ L +P + K K+ +L+
Sbjct 358 TSPRSSDTEENDK----RRTHNVLERQRRNELKRSFFALRDQIPELEN-NEKAPKVVILK 412
Query 117 MAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
A ++ +++ ++LKH + +
Sbjct 413 KATAYILSVQAEEQKLISEE-DLLRKRREQLKHKLEQ 448
>sp|A4IFU7|TFEC_BOVIN Transcription factor EC OS=Bos taurus OX=9913
GN=TFEC PE=2 SV=1
Length=317
Score = 43.4 bits (100), Expect = 0.005, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 42/81 (52%), Gaps = 0/81 (0%)
Query 63 YTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
T + + ++ H+ IE+RRR +N I EL +L+P N + +K T+L+ +V+++
Sbjct 101 DTRALAKERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVEYI 160
Query 123 KTLRGATNPYTEANYKPTFLS 143
K L+ E ++ L
Sbjct 161 KWLQKEQQRAQELEHRQKKLE 181
>sp|Q09961|HLH14_CAEEL Helix-loop-helix protein 14 OS=Caenorhabditis
elegans OX=6239 GN=hlh-14 PE=1 SV=3
Length=148
Score = 41.4 bits (95), Expect = 0.005, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR--GA 128
K + A ++ E++R ++N D L + + ++K K LR AV++++ L+
Sbjct 3 KKNQVARNERERKRVHQVNHGFDVLRNRL-QPKNHTKKWSKADTLREAVKYIQQLQVLLN 61
Query 129 TNPYTEANYKPT 140
+P + T
Sbjct 62 QDPQQPSVSSST 73
>sp|P17920|MYOG_CHICK Myogenin OS=Gallus gallus OX=9031 GN=MYOG
PE=2 SV=1
Length=227
Score = 42.6 bits (98), Expect = 0.005, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (3%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
R A + EKRR K+N + L T +++L K+ +LR A+Q+++ L+ +
Sbjct 83 RRRAATLREKRRLKKVNEAFEALKR--STLLNPNQRLPKVEILRSAIQYIERLQSLLSSL 140
Query 133 TEANYKP 139
+ +
Sbjct 141 NQQEREQ 147
>sp|A2WZ60|IRO2_ORYSI Protein IRON-RELATED TRANSCRIPTION FACTOR
2 OS=Oryza sativa subsp. indica OX=39946 GN=IRO2 PE=3 SV=1
Length=248
Score = 43.0 bits (99), Expect = 0.005, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
+ +H+ E+ RR ++N L +L+P + KL T + ++++ L+
Sbjct 69 RKLSHNAYERDRRKQLNELYSSLRALLPDADHTK-KLSIPTTVSRVLKYIPELQKQVENL 127
Query 133 TEANYKPTFLSDDELKHLIL 152
+ T S K +L
Sbjct 128 ERKKKELTTTSTTNCKPGVL 147
>sp|Q8J1X7|FUSC3_FUSCU Allergen Fus c 3 OS=Fusarium culmorum OX=5516
PE=1 SV=1
Length=450
Score = 43.4 bits (100), Expect = 0.005, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 55/146 (38%), Gaps = 20/146 (14%)
Query 9 SSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQG 68
+ ++SD SP T S + TS +++ + + + L+
Sbjct 305 AHSVSDAASPSSTSHQSRASLTSKSASMTSAASTASSRKSKLRSASRTSKNTLDKPNDTA 364
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVP--------------------TCNAMSRK 108
+ R +H+ +EK+ R+++N+ + L +P N + R+
Sbjct 365 EDRRTRASHNLVEKQYRNRLNAQFESLLHALPEQIRHGDNGGGNGNVDNESEQANDLDRR 424
Query 109 LDKLTVLRMAVQHMKTLRGATNPYTE 134
+ K VL MA +H++ L N
Sbjct 425 VSKGEVLEMARRHIEALERERNQLGT 450
>sp|Q07016|MAX_XENLA Protein max OS=Xenopus laevis OX=8355 GN=max
PE=2 SV=1
Length=163
Score = 41.8 bits (96), Expect = 0.005, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 36/84 (43%), Gaps = 5/84 (6%)
Query 54 KDDPHGRLEYTEHQGRI---KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLD 110
D+ +E E R + R H+ +E++RRD + L VP+ K
Sbjct 2 SDNDDIEVESDEDSSRFPYSADKRAHHNALERKRRDHIKDSFHGLRDSVPSLQGE--KAS 59
Query 111 KLTVLRMAVQHMKTLRGATNPYTE 134
+ +L A ++++ +R + + +
Sbjct 60 RAQILDKATEYIQYMRRKNHTHQQ 83
>sp|P49033|MYC_HYLLA Myc proto-oncogene protein OS=Hylobates lar
OX=9580 GN=MYC PE=3 SV=1
Length=439
Score = 43.4 bits (100), Expect = 0.005, Method: Composition-based stats.
Identities = 19/97 (20%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
R TE + R H+ +E++RR+++ L +P + K K+ +L+
Sbjct 343 TSPRSSDTEENDK----RRTHNVLERQRRNELKRSFFALRDQIPELEN-NEKAPKVVILK 397
Query 117 MAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
A ++ +++G T + ++LKH + +
Sbjct 398 KATAYILSVQGEEQKLT-SEKDLLRKRREQLKHKLEQ 433
>sp|P23999|MYCS_RAT Protein S-Myc OS=Rattus norvegicus OX=10116
GN=Mycs PE=3 SV=1
Length=429
Score = 43.4 bits (100), Expect = 0.005, Method: Composition-based stats.
Identities = 21/79 (27%), Positives = 37/79 (47%), Gaps = 8/79 (10%)
Query 54 KDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT 113
+ + LE E R H+++E++RRD M S L LVP + K K+
Sbjct 335 RSRSNSDLEDIE-------RRRNHNRMERQRRDIMRSSFLNLRDLVPEL-VHNEKAAKVV 386
Query 114 VLRMAVQHMKTLRGATNPY 132
+L+ A +++ TL+ +
Sbjct 387 ILKKATEYIHTLQTDESKL 405
>sp|Q9WTW4|TFEC_MOUSE Transcription factor EC OS=Mus musculus
OX=10090 GN=Tfec PE=1 SV=1
Length=317
Score = 43.0 bits (99), Expect = 0.005, Method: Composition-based stats.
Identities = 26/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (5%)
Query 60 RLEYTEHQGR----IKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVL 115
R E E GR + ++ H+ IE+RRR +N I EL +L+P N + +K T+L
Sbjct 94 RKEIAETDGRALAKERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTIL 153
Query 116 RMAVQHMKTLRGATNPYTEANYKPTFLS 143
+ +V ++K L+ E ++ L
Sbjct 154 KASVDYIKWLQKEQQRARELEHRQKKLE 181
>sp|P06171|MYC1_XENLA Transcriptional regulator Myc-A OS=Xenopus
laevis OX=8355 GN=myc-a PE=2 SV=1
Length=419
Score = 43.0 bits (99), Expect = 0.006, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 54/136 (40%), Gaps = 7/136 (5%)
Query 24 LSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKR 83
S S V R + S+ + + ++ R +E + R+ H+ +E++
Sbjct 291 ASPSTKVDYVSSKRAKLESNIRVLKQISNNRKCASPRSSDSEENDK----RKTHNVLERQ 346
Query 84 RRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLS 143
RR+++ L VP A + K K+ +L+ A ++ +L+ +
Sbjct 347 RRNELKLSFFALRDQVPEV-ASNEKAPKVVILKKATEYAISLQEDERRLIRET-EQLKYR 404
Query 144 DDELKHLILRAADGFL 159
++LK L+ F+
Sbjct 405 KEQLKQR-LQQLRNFV 419
>sp|Q15784|NDF2_HUMAN Neurogenic differentiation factor 2 OS=Homo
sapiens OX=9606 GN=NEUROD2 PE=1 SV=2
Length=382
Score = 43.0 bits (99), Expect = 0.006, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (2%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
R K R+ + E+ R +N+ +D L +VP C + ++KL K+ LR+A ++
Sbjct 118 RSKLRRQKANARERNRMHDLNAALDNLRKVVP-CYSKTQKLSKIETLRLAKNYI 170
>sp|P01109|MYC_CHICK Myc proto-oncogene protein OS=Gallus gallus
OX=9031 GN=MYC PE=1 SV=2
Length=435
Score = 43.0 bits (99), Expect = 0.006, Method: Composition-based stats.
Identities = 15/89 (17%), Positives = 40/89 (45%), Gaps = 2/89 (2%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ R H+ +E++RR+++ L +P A + K K+ +L+ A +++ +
Sbjct 343 TSDSEENDKRRTHNVLERQRRNELKLSFFALRDQIPEV-ANNEKAPKVVILKKATEYVLS 401
Query 125 LRGATNPYTEANYKPTFLSDDELKHLILR 153
++ + + ++LKH + +
Sbjct 402 IQSDEHRLIAEK-EQLRRRREQLKHKLEQ 429
>sp|Q91154|MYF5_NOTVI Myogenic factor 5 OS=Notophthalmus viridescens
OX=8316 GN=MYF-5 PE=2 SV=1
Length=256
Score = 42.6 bits (98), Expect = 0.006, Method: Composition-based stats.
Identities = 21/93 (23%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ + + R+A + E+RR K+NS + L T +++L K+ +LR A+ ++++
Sbjct 76 KRKSSTMDRRKAATMRERRRLKKVNSAFETLKRC--TTANPNQRLPKVEILRNAISYIES 133
Query 125 LRGATNPYTEANYKPTFLSDDELKHLILRAADG 157
L+ E Y E + +DG
Sbjct 134 LQELLREQVENYYTLPGQRCSEPGSPLSNCSDG 166
>sp|Q80US8|MAD3_MOUSE Max dimerization protein 3 OS=Mus musculus
OX=10090 GN=Mxd3 PE=1 SV=1
Length=206
Score = 42.2 bits (97), Expect = 0.006, Method: Composition-based stats.
Identities = 16/58 (28%), Positives = 30/58 (52%), Gaps = 1/58 (2%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNP 131
R H+++EKRRR ++ +++L +P +R L++LR A H++ L
Sbjct 59 RSVHNELEKRRRAQLKRCLEQLRQQMPLGVDCTRYT-TLSLLRRARVHIQKLEEQEQQ 115
>sp|P33122|TYE7_YEAST Transcription factor TYE7 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TYE7
PE=1 SV=1
Length=291
Score = 42.6 bits (98), Expect = 0.006, Method: Composition-based stats.
Identities = 31/164 (19%), Positives = 59/164 (36%), Gaps = 34/164 (21%)
Query 1 MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR 60
+ + D + +++DF P L+ + + T D + K + T+ D +
Sbjct 111 IKREEDDNALSLADF-EPASLQLMPNMINTDNNDDSTPLKNEIELNDSFIKTNLDAKETK 169
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASL---------------------- 98
+ ++AH++IEKR R +N+ I L +
Sbjct 170 KRAPRKRLTP-FQKQAHNKIEKRYRININTKIARLQQIIPWVASEQTAFEVGDSVKKQDE 228
Query 99 ----------VPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
+P+ A S KL+K +L AV ++ L+ Y
Sbjct 229 DGAETAATTPLPSAAATSTKLNKSMILEKAVDYILYLQNNERLY 272
>sp|P59101|SCX_CHICK Basic helix-loop-helix transcription factor
scleraxis OS=Gallus gallus OX=9031 GN=SCX PE=2 SV=1
Length=187
Score = 41.8 bits (96), Expect = 0.007, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (2%)
Query 68 GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
R R + E+ R + +N+ L +L+PT A RKL K+ LR+A ++ L
Sbjct 63 HREPRQRHTANARERDRTNSVNTAFTALRTLIPTEPAD-RKLSKIETLRLASSYISHL 119
>sp|Q64210|MYC2_OTOBE N-myc 2 proto-oncogene protein OS=Otospermophilus
beecheyi OX=34862 GN=N-MYC2 PE=3 SV=1
Length=454
Score = 43.0 bits (99), Expect = 0.007, Method: Composition-based stats.
Identities = 14/68 (21%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ R H+ +E++RR+ + S L VP + K K+ +L+ A +++
Sbjct 364 KSDSEDSVRRRNHNILERQRRNDLRSSFTTLRDHVPEL-VKNEKAAKVVILKKACEYVHY 422
Query 125 LRGATNPY 132
L+ +
Sbjct 423 LQAKEHQL 430
>sp|Q62414|NDF2_MOUSE Neurogenic differentiation factor 2 OS=Mus
musculus OX=10090 GN=Neurod2 PE=1 SV=3
Length=383
Score = 43.0 bits (99), Expect = 0.007, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (2%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
R K R+ + E+ R +N+ +D L +VP C + ++KL K+ LR+A ++
Sbjct 119 RSKLRRQKANARERNRMHDLNAALDNLRKVVP-CYSKTQKLSKIETLRLAKNYI 171
>sp|Q90YI8|TAL1_TAKRU T-cell acute lymphocytic leukemia protein
1 OS=Takifugu rubripes OX=31033 GN=tal1 PE=2 SV=1
Length=371
Score = 43.0 bits (99), Expect = 0.007, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 29/61 (48%), Gaps = 1/61 (2%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
R + E+ R+ +N EL L+PT + +KL K +LR+A++++ L
Sbjct 205 RRIFTNSRERWRQQNVNGAFAELRKLIPT-HPPDKKLSKNEILRLAMKYISFLSNLLEDQ 263
Query 133 T 133
Sbjct 264 D 264
>sp|P70447|NGN2_MOUSE Neurogenin-2 OS=Mus musculus OX=10090 GN=Neurog2
PE=1 SV=1
Length=263
Score = 42.6 bits (98), Expect = 0.007, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 6/127 (5%)
Query 25 SSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRR 84
S + G G + G + + + G Q K R + E+ R
Sbjct 66 SPASGAGGCR-PGRLLGLMHECKRRPSRSRAVSRGAKTAETVQRIKKTRRLKANNRERNR 124
Query 85 RDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM----KTLRGATNPYTEANYKPT 140
+N+ +D L ++PT + KL K+ LR A ++ +TLR A + +
Sbjct 125 MHNLNAALDALREVLPTFPEDA-KLTKIETLRFAHNYIWALTETLRLADHCAGAGGLQGA 183
Query 141 FLSDDEL 147
++ L
Sbjct 184 LFTEAVL 190
>sp|Q7X8R0|EAT1_ORYSJ Transcription factor EAT1 OS=Oryza sativa
subsp. japonica OX=39947 GN=EAT1 PE=1 SV=2
Length=464
Score = 43.0 bits (99), Expect = 0.007, Method: Composition-based stats.
Identities = 11/46 (24%), Positives = 23/46 (50%), Gaps = 4/46 (9%)
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
E+ RR+++N L L P K D+ +++ A++++ L
Sbjct 269 TERERREQLNVKFRTLRMLFPNP----TKNDRASIVGDAIEYIDEL 310
>sp|O93507|TAL1_DANRE T-cell acute lymphocytic leukemia protein
1 homolog OS=Danio rerio OX=7955 GN=tal1 PE=1 SV=1
Length=324
Score = 42.6 bits (98), Expect = 0.007, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (2%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
R + E+ R+ +N EL L+PT + +KL K +LR+A++++ L N
Sbjct 186 RRIFTNSRERWRQQNVNGAFAELRKLIPT-HPPDKKLSKNEILRLAMKYINFLAKLLNDQ 244
Query 133 TE 134
+
Sbjct 245 DD 246
>sp|Q16559|TAL2_HUMAN T-cell acute lymphocytic leukemia protein
2 OS=Homo sapiens OX=9606 GN=TAL2 PE=1 SV=1
Length=108
Score = 40.3 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query 78 SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
+ E+ R+ +NS +L L+PT + +KL K LR+A++++
Sbjct 8 NTRERWRQQNVNSAFAKLRKLIPT-HPPDKKLSKNETLRLAMRYI 51
>sp|P0C0N8|MYC_AVIME Viral myc transforming protein OS=Avian retrovirus
MH2E21 OX=11916 GN=MYC PE=3 SV=1
Length=412
Score = 43.0 bits (99), Expect = 0.007, Method: Composition-based stats.
Identities = 15/89 (17%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ + R H+ +E++RR+++ L +P A + K K+ +L+ A +++ +
Sbjct 320 TSDSEVNDKRRTHNVLERQRRNELKLSFFALRDQIPEV-ANNEKAPKVVILKRATEYVLS 378
Query 125 LRGATNPYTEANYKPTFLSDDELKHLILR 153
++ + + ++LKH + +
Sbjct 379 IQSDEHRLIAEK-EQLRRRREQLKHKLEQ 406
>sp|P20389|MYC2_MARMO N-myc 2 proto-oncogene protein OS=Marmota
monax OX=9995 GN=N-MYC2 PE=3 SV=1
Length=454
Score = 43.0 bits (99), Expect = 0.007, Method: Composition-based stats.
Identities = 14/68 (21%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ R H+ +E++RR+ + S L VP + K K+ +L+ A +++
Sbjct 364 KSDSEDSVRRRNHNILERQRRNDLRSSFTTLRDHVPEL-VKNEKAAKVVILKKACEYVHY 422
Query 125 LRGATNPY 132
L+ +
Sbjct 423 LQAKEHQL 430
>sp|Q9FYE6|BH101_ARATH Transcription factor bHLH101 OS=Arabidopsis
thaliana OX=3702 GN=BHLH101 PE=1 SV=1
Length=240
Score = 42.2 bits (97), Expect = 0.007, Method: Composition-based stats.
Identities = 13/63 (21%), Positives = 27/63 (43%), Gaps = 1/63 (2%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
+ H+ E+ RR K+N+ L +L+P + RKL + V+++ +
Sbjct 66 KKLNHNASERDRRRKLNALYSSLRALLPLSDQ-KRKLSIPMTVARVVKYIPEQKQELQRL 124
Query 133 TEA 135
+
Sbjct 125 SRR 127
>sp|Q63689|NDF2_RAT Neurogenic differentiation factor 2 OS=Rattus
norvegicus OX=10116 GN=Neurod2 PE=1 SV=2
Length=382
Score = 43.0 bits (99), Expect = 0.007, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (2%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
R K R+ + E+ R +N+ +D L +VP C + ++KL K+ LR+A ++
Sbjct 118 RSKLRRQKANARERNRMHDLNAALDNLRKVVP-CYSKTQKLSKIETLRLAKNYI 170
>sp|Q00858|CGPB_FUSVN Cutinase gene palindrome-binding protein
OS=Fusarium vanettenii OX=2747968 PE=2 SV=1
Length=457
Score = 43.0 bits (99), Expect = 0.007, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 1/89 (1%)
Query 126 RGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQN 185
N + A+ F ++ FL ++ G+I + S S+ + YS
Sbjct 85 FAQMNLTSAASTLTEFTKRRNWPAKVVEELRDFLQILDA-NGRIKYASPSILNVTGYSVE 143
Query 186 DLIGQSLFDYLHPKDIAKVKEQLSSSDTA 214
++ L D +HP D +L+ S +
Sbjct 144 EIQDIFLKDLIHPDDRGVFVAELNESIAS 172
Score = 40.7 bits (93), Expect = 0.042, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (38%), Gaps = 5/93 (5%)
Query 326 PQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHL 385
P V E+R +++ +G+ + + Y +E+ + H DD G
Sbjct 107 PAKVVEELR----DFLQILDANGRIKYASPSILNVTGYSVEEIQDIFLKDLIHPDDRGVF 162
Query 386 AECHRQVLQTREKITTNCYKFKIKDGSFITLRS 418
+ + + + Y+FK KDG F +
Sbjct 163 VAELNESIASGNPLRL-FYRFKKKDGKFAIFET 194
>sp|Q9LTC7|BH034_ARATH Transcription factor bHLH34 OS=Arabidopsis
thaliana OX=3702 GN=BHLH34 PE=2 SV=1
Length=320
Score = 42.6 bits (98), Expect = 0.007, Method: Composition-based stats.
Identities = 21/85 (25%), Positives = 37/85 (44%), Gaps = 6/85 (7%)
Query 54 KDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT 113
+++ G+ T + EK RR+K+N +L+S++ K DK
Sbjct 148 EEECSGKRRRTGSCSKPGTKACR----EKLRREKLNDKFMDLSSVLEPGRTP--KTDKSA 201
Query 114 VLRMAVQHMKTLRGATNPYTEANYK 138
+L A++ + LRG + E N K
Sbjct 202 ILDDAIRVVNQLRGEAHELQETNQK 226
>sp|P01106|MYC_HUMAN Myc proto-oncogene protein OS=Homo sapiens
OX=9606 GN=MYC PE=1 SV=2
Length=454
Score = 43.0 bits (99), Expect = 0.008, Method: Composition-based stats.
Identities = 16/122 (13%), Positives = 45/122 (37%), Gaps = 4/122 (3%)
Query 34 DCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKN--AREAHSQIEKRRRDKMNSF 91
+ + +S+ + + R + + R H+ +E++RR+++
Sbjct 329 STRKDYPAAKRVKLDSVRVLRQISNNRKCTSPRSSDTEENVKRRTHNVLERQRRNELKRS 388
Query 92 IDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLI 151
L +P + K K+ +L+ A ++ +++ ++LKH +
Sbjct 389 FFALRDQIPELEN-NEKAPKVVILKKATAYILSVQAEEQKLISEE-DLLRKRREQLKHKL 446
Query 152 LR 153
+
Sbjct 447 EQ 448
>sp|P10395|MYC_AVIM2 Viral myc transforming protein OS=Avian myelocytomatosis
virus CMII OX=11869 GN=MYC PE=3 SV=2
Length=416
Score = 43.0 bits (99), Expect = 0.008, Method: Composition-based stats.
Identities = 15/89 (17%), Positives = 40/89 (45%), Gaps = 2/89 (2%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ R H+ +E++RR+++ L +P A + K K+ +L+ A +++ +
Sbjct 324 TSDSEENDKRRTHNVLERQRRNELKLSFFALRDQIPEV-ANNEKAPKVVILKKATEYVLS 382
Query 125 LRGATNPYTEANYKPTFLSDDELKHLILR 153
++ + + ++LKH + +
Sbjct 383 IQSDEHRLIAEK-EQLRRRREQLKHKLEQ 410
>sp|G5EG44|MDL1_CAEEL Mad-like protein 1 OS=Caenorhabditis elegans
OX=6239 GN=mdl-1 PE=1 SV=1
Length=281
Score = 42.6 bits (98), Expect = 0.008, Method: Composition-based stats.
Identities = 22/97 (23%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
Query 38 KRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELAS 97
+K SS S + K++R AH+++EK RR + ++ L
Sbjct 66 DKKQSSCASNASTS-----SQPYCSSPPARKSSKHSRTAHNELEKTRRANLRGCLETLKM 120
Query 98 LVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTE 134
LVP C + + + L +L A H+ L+ + +
Sbjct 121 LVP-CVSDATRNTTLALLTRARDHIIELQDSNAAQMK 156
>sp|Q63302|TFEC_RAT Transcription factor EC OS=Rattus norvegicus
OX=10116 GN=Tfec PE=1 SV=2
Length=317
Score = 42.6 bits (98), Expect = 0.008, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 41/81 (51%), Gaps = 0/81 (0%)
Query 63 YTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
T + + ++ H+ IE+RRR +N I EL +L+P N + +K T+L+ +V ++
Sbjct 101 DTRALAKERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDIRWNKGTILKASVDYI 160
Query 123 KTLRGATNPYTEANYKPTFLS 143
K L+ E ++ L
Sbjct 161 KWLQKEQQRARELEHRQKKLE 181
>sp|Q5AL36|TYE7_CANAL Carbohydrate metabolism regulator TYE7 OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) OX=237561
GN=TYE7 PE=1 SV=1
Length=269
Score = 42.2 bits (97), Expect = 0.008, Method: Composition-based stats.
Identities = 18/86 (21%), Positives = 37/86 (43%), Gaps = 18/86 (21%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVP------------------TCNAMSRKLDKL 112
++ ++AH++IEKR R +N+ I + ++P + +L+K
Sbjct 172 ESQKKAHNKIEKRYRININAKIAGIQKIIPWVAFEKTAFETGEENETEAEAKNNTRLNKS 231
Query 113 TVLRMAVQHMKTLRGATNPYTEANYK 138
+L A +++ L+ Y N K
Sbjct 232 MILEKATEYILHLQKKEEEYMAENQK 257
>sp|Q62912|MAD3_RAT Max dimerization protein 3 OS=Rattus norvegicus
OX=10116 GN=Mxd3 PE=2 SV=1
Length=206
Score = 41.8 bits (96), Expect = 0.008, Method: Composition-based stats.
Identities = 15/61 (25%), Positives = 29/61 (48%), Gaps = 1/61 (2%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
R H+++EKRRR ++ +++L +P + L++LR A H++ L
Sbjct 59 RHVHNELEKRRRAQLKRCLEQLRQQMPLG-VDHTRYTTLSLLRGARMHIQKLEEQEQQAQ 117
Query 134 E 134
Sbjct 118 R 118
>sp|P97831|TWST2_RAT Twist-related protein 2 OS=Rattus norvegicus
OX=10116 GN=Twist2 PE=2 SV=2
Length=160
Score = 41.0 bits (94), Expect = 0.008, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 37/89 (42%), Gaps = 2/89 (2%)
Query 34 DCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFID 93
RKR+ S ++ T + +++ R + E++R +N
Sbjct 28 RFGRKRRYSKKSSEDGSPTPGKRGKKGSPSAQSFEELQSQRILANVRERQRTQSLNEAFA 87
Query 94 ELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
L ++PT S KL K+ L++A +++
Sbjct 88 ALRKIIPT--LPSDKLSKIQTLKLAARYI 114
>sp|Q8WVJ9|TWST2_HUMAN Twist-related protein 2 OS=Homo sapiens
OX=9606 GN=TWIST2 PE=1 SV=1
Length=160
Score = 41.0 bits (94), Expect = 0.008, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 37/89 (42%), Gaps = 2/89 (2%)
Query 34 DCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFID 93
RKR+ S ++ T + +++ R + E++R +N
Sbjct 28 RFGRKRRYSKKSSEDGSPTPGKRGKKGSPSAQSFEELQSQRILANVRERQRTQSLNEAFA 87
Query 94 ELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
L ++PT S KL K+ L++A +++
Sbjct 88 ALRKIIPT--LPSDKLSKIQTLKLAARYI 114
>sp|P01108|MYC_MOUSE Myc proto-oncogene protein OS=Mus musculus
OX=10090 GN=Myc PE=1 SV=2
Length=454
Score = 43.0 bits (99), Expect = 0.008, Method: Composition-based stats.
Identities = 18/97 (19%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
R TE + R H+ +E++RR+++ L +P + K K+ +L+
Sbjct 358 SSPRSSDTEENDK----RRTHNVLERQRRNELKRSFFALRDQIPELEN-NEKAPKVVILK 412
Query 117 MAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
A ++ +++ + T + ++LKH + +
Sbjct 413 KATAYILSIQADEHKLT-SEKDLLRKRREQLKHKLEQ 448
>sp|Q5XFQ6|TFEC_CHICK Transcription factor EC OS=Gallus gallus
OX=9031 GN=TFEC PE=2 SV=1
Length=377
Score = 42.6 bits (98), Expect = 0.008, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 11/165 (7%)
Query 63 YTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
T + + ++ H+ IE+RRR +N I EL +L+P N + +K T+L+ +V+++
Sbjct 160 DTRAMAKERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVEYI 219
Query 123 KTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNY 182
K L+ E ++ L + L+LR + L + G + S
Sbjct 220 KWLQKEQQRARELEHRQKKLEHAN-RRLLLRIQE--LEIQARAHGLPVMSS--------L 268
Query 183 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLP 227
S DL Q + +P++ + Q P + D T
Sbjct 269 SAVDLAAQVIKQQSYPEENSVDYSQQMPLAHGPNSDVCDGSTAFS 313
>sp|Q60539|TCF15_MESAU Transcription factor 15 OS=Mesocricetus
auratus OX=10036 GN=TCF15 PE=2 SV=1
Length=195
Score = 41.4 bits (95), Expect = 0.008, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 34/71 (48%), Gaps = 2/71 (3%)
Query 72 NAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNP 131
R+A + E+ R +N+ L +L+PT + RKL K+ LR+A ++ L
Sbjct 70 RQRQAANARERDRTQSVNTAFTALRTLIPT-EPVDRKLSKIETLRLASSYIAHLANVLML 128
Query 132 YTEA-NYKPTF 141
A + +P F
Sbjct 129 GDAADDGQPCF 139
>sp|Q9FLI0|BH120_ARATH Transcription factor bHLH120 OS=Arabidopsis
thaliana OX=3702 GN=BHLH120 PE=2 SV=2
Length=204
Score = 41.8 bits (96), Expect = 0.008, Method: Composition-based stats.
Identities = 30/159 (19%), Positives = 54/159 (34%), Gaps = 14/159 (9%)
Query 50 MDTDKDDPHGRLEYTEHQGRIKNAREA---HSQIEKRRRDKMNSFIDELASLVPT----- 101
M+ + R + Q R + +E H IE++RR +M L S +P
Sbjct 1 MNPSNNPKKTRHQSHMPQERDETKKEKKLLHRNIERQRRQEMAILFASLRSQLPLKYIKG 60
Query 102 CNAMSRKLDKL-TVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLF 160
AMS ++ + ++ +K L + PT L+ R+ +
Sbjct 61 KRAMSDHVNGAVSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGSGSSRSEPASVM 120
Query 161 VVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPK 199
V C G + VS + + + LH +
Sbjct 121 VQPCVSGFEVVVSSLASGL-----EAWPLSRVLEVLHGQ 154
>sp|O96642|TWIST_BRABE Twist-related protein OS=Branchiostoma
belcheri OX=7741 GN=TWIST PE=2 SV=1
Length=196
Score = 41.4 bits (95), Expect = 0.008, Method: Composition-based stats.
Identities = 23/128 (18%), Positives = 43/128 (34%), Gaps = 21/128 (16%)
Query 14 DFMSPGPTDLLSSSLGTSGVDCNRK--------RKGSSTDYQESMDTDKDDPHGRLEYTE 65
D + P P + +SG + RK + S D
Sbjct 18 DLVKPDPDASPLADHSSSGPEAEEDPSRSKRYERKRRYSKSSASSDDGSTGGGSVGGGKS 77
Query 66 HQGRIKNAREAH-----------SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTV 114
+ R K ++ + E++R +N L ++PT S KL K+
Sbjct 78 GKNRKKTSKAESFEDLQNQRVLANVRERQRTQSLNEAFSSLRKIIPT--LPSDKLSKIQT 135
Query 115 LRMAVQHM 122
L++A +++
Sbjct 136 LKLAARYI 143
>sp|P79766|NDF4_CHICK Neurogenic differentiation factor 4 OS=Gallus
gallus OX=9031 GN=NEUROD4 PE=2 SV=1
Length=330
Score = 42.6 bits (98), Expect = 0.009, Method: Composition-based stats.
Identities = 17/71 (24%), Positives = 31/71 (44%), Gaps = 1/71 (1%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
R + R + E+ R +N +D L ++P C + ++KL K+ LR+A ++ L
Sbjct 84 RFRARRVKANARERTRMHGLNDALDNLRRVMP-CYSKTQKLSKIETLRLARNYIWALSEV 142
Query 129 TNPYTEANYKP 139
K
Sbjct 143 LETGQTPEGKS 153
>sp|Q9S7Y1|BH030_ARATH Transcription factor bHLH30 OS=Arabidopsis
thaliana OX=3702 GN=BHLH30 PE=1 SV=1
Length=368
Score = 42.6 bits (98), Expect = 0.009, Method: Composition-based stats.
Identities = 24/78 (31%), Positives = 46/78 (59%), Gaps = 4/78 (5%)
Query 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
+ A ++HS+ E+RRR+++N+ + +L S++P + K DK ++L +QH+K L+
Sbjct 168 DAKALAASKSHSEAERRRRERINNHLAKLRSILP----NTTKTDKASLLAEVIQHVKELK 223
Query 127 GATNPYTEANYKPTFLSD 144
T+ +E N PT +
Sbjct 224 RETSVISETNLVPTESDE 241
>sp|Q9D030|TWST2_MOUSE Twist-related protein 2 OS=Mus musculus
OX=10090 GN=Twist2 PE=1 SV=1
Length=160
Score = 41.0 bits (94), Expect = 0.009, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 37/89 (42%), Gaps = 2/89 (2%)
Query 34 DCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFID 93
RKR+ S ++ T + +++ R + E++R +N
Sbjct 28 RFGRKRRYSKKSSEDGSPTPGKRGKKGSPSAQSFEELQSQRILANVRERQRTQSLNEAFA 87
Query 94 ELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
L ++PT S KL K+ L++A +++
Sbjct 88 ALRKIIPT--LPSDKLSKIQTLKLAARYI 114
>sp|B8XIA5|MYC_MACMU Myc proto-oncogene protein OS=Macaca mulatta
OX=9544 GN=MYC PE=1 SV=2
Length=454
Score = 42.6 bits (98), Expect = 0.009, Method: Composition-based stats.
Identities = 17/97 (18%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
R TE + R H+ +E++RR+++ L +P + K K+ +L+
Sbjct 358 TSPRSSDTEENDK----RRTHNVLERQRRNELKRSFFALRDQIPELEN-NEKAPKVVILK 412
Query 117 MAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
A ++ +++ + ++LKH + +
Sbjct 413 KATAYILSVQAEEQKLI-SEKDLLRKRREQLKHKLEQ 448
>sp|P46581|NDF1_CAEEL Neurogenic differentiation factor 1 OS=Caenorhabditis
elegans OX=6239 GN=cnd-1 PE=2 SV=1
Length=192
Score = 41.4 bits (95), Expect = 0.009, Method: Composition-based stats.
Identities = 17/103 (17%), Positives = 32/103 (31%), Gaps = 5/103 (5%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
+ K R + E+ R +N+ +D L +P KL K+ LR
Sbjct 4 TDTSNFAPAEISKRKVRRVKANGRERARMHGLNNALDMLREYIPITTQHQ-KLSKIETLR 62
Query 117 MAVQHM----KTLRGATNPYTEANYKPTFLSDDELKHLILRAA 155
+A ++ + L+ P + +L
Sbjct 63 LARNYIDALQRMLQTNEQPTPLEYAHTLANGLSQTTTNMLANL 105
>sp|Q71T09|BHE22_CHICK Class E basic helix-loop-helix protein
22 OS=Gallus gallus OX=9031 GN=BHLHE22 PE=2 SV=1
Length=311
Score = 42.2 bits (97), Expect = 0.009, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 36/79 (46%), Gaps = 2/79 (3%)
Query 55 DDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMS-RKLDKLT 113
+ HG ++ K R + E+RR +N +DEL +++P ++ S RKL K+
Sbjct 155 SNGHGH-GGSKKSKEQKALRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIA 213
Query 114 VLRMAVQHMKTLRGATNPY 132
L +A ++ A
Sbjct 214 TLLLAKNYILMQAQALEEM 232
>sp|Q923Z4|FER3L_MOUSE Fer3-like protein OS=Mus musculus OX=10090
GN=Ferd3l PE=1 SV=1
Length=168
Score = 41.0 bits (94), Expect = 0.009, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 47/136 (35%), Gaps = 21/136 (15%)
Query 23 LLSSSLGTSGVDCNRKRKGSSTDYQES-MDTDKDDPH------------GRLEYTEHQGR 69
G + R G + + E + + D+ GR GR
Sbjct 34 PPGVPFGDRTLGYREGRPGRLSQFDERYQEVEGDEVEYEDPEEEEEEGEGRGRVASLLGR 93
Query 70 IKNAR-------EAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
K R +A + E++R +N D+L VPT A ++L ++ LR+A+ ++
Sbjct 94 PKRKRVITYAQRQAANIRERKRMFNLNEAFDQLRRKVPT-FAYEKRLSRIETLRLAIVYI 152
Query 123 KTLRGATNPYTEANYK 138
+ E
Sbjct 153 SFMTELLQSKEEKEAS 168
>sp|P49032|MYC_CALJA Myc proto-oncogene protein OS=Callithrix
jacchus OX=9483 GN=MYC PE=3 SV=1
Length=438
Score = 42.6 bits (98), Expect = 0.009, Method: Composition-based stats.
Identities = 17/97 (18%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
R TE + R H+ +E++RR+++ L +P + K K+ +L+
Sbjct 342 TSPRSSDTEENDK----RRTHNVLERQRRNELKRSFFALRDQIPELEN-NEKAPKVVILK 396
Query 117 MAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
A ++ +++ + ++LKH + +
Sbjct 397 KATTYILSVQAEEQKLI-SEKDLLRKRREQLKHKLEQ 432
>sp|Q60756|TCF15_MOUSE Transcription factor 15 OS=Mus musculus
OX=10090 GN=Tcf15 PE=1 SV=2
Length=195
Score = 41.4 bits (95), Expect = 0.010, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (54%), Gaps = 1/54 (2%)
Query 72 NAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
R+A + E+ R +N+ L +L+PT + RKL K+ LR+A ++ L
Sbjct 70 RQRQAANARERDRTQSVNTAFTALRTLIPT-EPVDRKLSKIETLRLASSYIAHL 122
>sp|Q9W6C7|NDF6B_DANRE Neurogenic differentiation factor 6-B OS=Danio
rerio OX=7955 GN=neurod6b PE=1 SV=3
Length=317
Score = 42.2 bits (97), Expect = 0.010, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 34/70 (49%), Gaps = 1/70 (1%)
Query 68 GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
R+K R+ + E+ R +N ++ L +VP C + ++KL K+ LR+A ++ L
Sbjct 74 DRVKMRRQEANARERSRMHGLNDALESLRKVVP-CYSKTQKLSKIETLRLAKNYIWALSE 132
Query 128 ATNPYTEANY 137
+ +
Sbjct 133 TLSAGKRPDL 142
>sp|Q9C682|BH115_ARATH Transcription factor bHLH115 OS=Arabidopsis
thaliana OX=3702 GN=BHLH115 PE=1 SV=1
Length=226
Score = 41.4 bits (95), Expect = 0.011, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 35/82 (43%), Gaps = 6/82 (7%)
Query 61 LEYTEHQGRIKNAREAHSQI----EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
++ + RIK S EK+RRD++N EL+S++ K DK+ ++
Sbjct 51 IKEPSSRKRIKTESCTGSNSKACREKQRRDRLNDKFTELSSVLEPGRTP--KTDKVAIIN 108
Query 117 MAVQHMKTLRGATNPYTEANYK 138
A++ + R + N
Sbjct 109 DAIRMVNQARDEAQKLKDLNSS 130
>sp|Q11094|TWIST_CAEEL Twist-related protein OS=Caenorhabditis
elegans OX=6239 GN=hlh-8 PE=1 SV=2
Length=178
Score = 41.0 bits (94), Expect = 0.011, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query 72 NAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNP 131
R ++ E++R ++N L L+P + S K+ K+ LR+A ++ L
Sbjct 20 QQRACANRRERQRTKELNDAFTLLRKLIP--SMPSDKMSKIHTLRIATDYISFLDEMQKN 77
>sp|Q92858|ATOH1_HUMAN Transcription factor ATOH1 OS=Homo sapiens
OX=9606 GN=ATOH1 PE=1 SV=1
Length=354
Score = 42.2 bits (97), Expect = 0.011, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
K R A + E+RR +N D+L +++P+ N KL K L+MA ++ L
Sbjct 158 KQRRLAANARERRRMHGLNHAFDQLRNVIPSFNNDK-KLSKYETLQMAQIYINALSELLQ 216
Query 131 PYTEANYKPTFLSDDELKHLILRAADGF 158
+ P + + H LR A +
Sbjct 217 TPSGGEQPPPPPASCKSDHHHLRTAASY 244
>sp|P0C0N9|MYC_AVIMH Viral myc transforming protein OS=Avian retrovirus
MH2 OX=11870 GN=MYC PE=3 SV=1
Length=412
Score = 42.2 bits (97), Expect = 0.011, Method: Composition-based stats.
Identities = 15/89 (17%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ + R H+ +E++RR+++ L +P A + K K+ +L+ A +++ +
Sbjct 320 TSDSEVNDKRRTHNVLERQRRNELKLSFFALRDQIPEV-ANNEKAPKVVILKRATEYVLS 378
Query 125 LRGATNPYTEANYKPTFLSDDELKHLILR 153
++ + + ++LKH + +
Sbjct 379 IQSDEHRLIAEK-EQLRRRREQLKHKLEQ 406
>sp|Q7ZVS9|MYCB_DANRE Transcriptional regulator Myc-B OS=Danio
rerio OX=7955 GN=mycb PE=2 SV=1
Length=396
Score = 42.2 bits (97), Expect = 0.011, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ R H+ +E++RR+++ L ++P A + K K+ +L+ A + + +
Sbjct 306 TSDSEDNDKRRTHNVLERQRRNELKLSFFALRDVIPDV-ANNEKAAKVVILKKATECIAS 364
Query 125 LRGATNPYTE 134
++
Sbjct 365 MQEDEQRLIS 374
>sp|A2T7L5|MYC_PONPY Myc proto-oncogene protein OS=Pongo pygmaeus
OX=9600 GN=MYC PE=3 SV=1
Length=439
Score = 42.2 bits (97), Expect = 0.011, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 39/97 (40%), Gaps = 6/97 (6%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
R E + R H+ +E++RR+++ L +P + K K+ +L+
Sbjct 343 TSPRSSDAEENDK----RRTHNVLERQRRNELKRSFFALRDQIPELEN-NEKAPKVVILK 397
Query 117 MAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
A ++ +++ + ++LKH + +
Sbjct 398 KATAYILSIQAEEQKLI-SEKDLLRKRREQLKHKLEQ 433
>sp|Q7ZSX3|PTF1A_DANRE Pancreas transcription factor 1 subunit
alpha OS=Danio rerio OX=7955 GN=ptf1a PE=2 SV=1
Length=265
Score = 41.8 bits (96), Expect = 0.011, Method: Composition-based stats.
Identities = 26/125 (21%), Positives = 48/125 (38%), Gaps = 20/125 (16%)
Query 51 DTDKDDPHGRLEYTEHQGRIKNA-------REAHSQIEKRRRDKMNSFIDELASLVPTCN 103
D+ + R + R + R+A + E+RR +N + L S +PT
Sbjct 87 DSTSELSPHRDGGLLKRRRRMRSEVEMQQLRQAANVRERRRMQSINDAFEGLRSHIPTL- 145
Query 104 AMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVG 163
++L K+ LR+A+ ++ L SD +++ A + V+
Sbjct 146 PYEKRLSKVDTLRLAIGYINFLA------------ELVQSDMPIRNPHSDALNQPKKVII 193
Query 164 CDRGK 168
C RG
Sbjct 194 CHRGT 198
>sp|Q62282|TAL2_MOUSE T-cell acute lymphocytic leukemia protein
2 homolog OS=Mus musculus OX=10090 GN=Tal2 PE=4 SV=1
Length=108
Score = 39.5 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 13/45 (29%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query 78 SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
+ E+ R+ +N+ +L L+PT + +KL K LR+A++++
Sbjct 8 NTRERWRQQSVNNAFAKLRKLIPT-HPPDKKLSKNETLRLAMRYI 51
>sp|Q91205|MYOD1_ONCMY Myoblast determination protein 1 homolog
1 OS=Oncorhynchus mykiss OX=8022 GN=myod1 PE=2 SV=1
Length=276
Score = 41.8 bits (96), Expect = 0.012, Method: Composition-based stats.
Identities = 20/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (4%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ + + R+A + E+RR K+N + L T +++L K+ +LR A+ ++++
Sbjct 77 KRKTTNADRRKAATMRERRRLSKVNDAFETLKRC--TSTNPNQRLPKVDILRNAISYIES 134
Query 125 LRGATNPY-TEANYKPTF 141
L+G E NY P
Sbjct 135 LQGLLRGAGQEGNYYPVM 152
>sp|P09416|MYC_RAT Myc proto-oncogene protein OS=Rattus norvegicus
OX=10116 GN=Myc PE=1 SV=2
Length=453
Score = 42.2 bits (97), Expect = 0.012, Method: Composition-based stats.
Identities = 17/97 (18%), Positives = 41/97 (42%), Gaps = 6/97 (6%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
R TE + R H+ +E++RR+++ L +P + K K+ +L+
Sbjct 357 SSPRSSDTEENDK----RRTHNVLERQRRNELKRSFFALRDQIPELEN-NEKAPKVVILK 411
Query 117 MAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
A ++ +++ + + ++LKH + +
Sbjct 412 KATAYILSVQADEHKLI-SEKDLLRKRREQLKHKLEQ 447
>sp|P49812|MYOG_PIG Myogenin OS=Sus scrofa OX=9823 GN=MYOG PE=3
SV=1
Length=224
Score = 41.4 bits (95), Expect = 0.012, Method: Composition-based stats.
Identities = 20/108 (19%), Positives = 40/108 (37%), Gaps = 2/108 (2%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
R A + EKRR K+N + L T +++L K+ +LR A+Q+++ L+ +
Sbjct 82 RRRAATLREKRRLKKVNEAFEALKR--STLLNPNQRLPKVEILRSAIQYIERLQALLSSL 139
Query 133 TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
+ + + + + G L + L
Sbjct 140 NQEERDLRYRGGGGPQPGVPSECSSHSASCSPEWGSALEFGPNPGDHL 187
>sp|Q5IS79|ATOH1_PANTR Transcription factor ATOH1 OS=Pan troglodytes
OX=9598 GN=ATOH1 PE=2 SV=1
Length=356
Score = 42.2 bits (97), Expect = 0.012, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
K R A + E+RR +N D+L +++P+ N KL K L+MA ++ L
Sbjct 160 KQRRLAANARERRRMHGLNHAFDQLRNVIPSFNNDK-KLSKYETLQMAQIYINALSELLQ 218
Query 131 PYTEANYKPTFLSDDELKHLILRAADGF 158
+ P + + H LR A +
Sbjct 219 TPSGGEQPPPPPASCKSDHHHLRTAASY 246
>sp|P48987|ATO_DROME Protein atonal OS=Drosophila melanogaster
OX=7227 GN=ato PE=1 SV=2
Length=312
Score = 41.8 bits (96), Expect = 0.012, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (2%)
Query 70 IKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
+ R A + E+RR +N D L +P C R+L K L+MA ++ L
Sbjct 253 KRKRRLAANARERRRMQNLNQAFDRLRQYLP-CLGNDRQLSKHETLQMAQTYISAL 307
>sp|Q12870|TCF15_HUMAN Transcription factor 15 OS=Homo sapiens
OX=9606 GN=TCF15 PE=1 SV=3
Length=199
Score = 41.0 bits (94), Expect = 0.012, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA-TNPY 132
R+A + E+ R +N+ L +L+PT + RKL K+ +R+A ++ L
Sbjct 74 RQAANARERDRTQSVNTAFTALRTLIPT-EPVDRKLSKIETVRLASSYIAHLANVLLLGD 132
Query 133 TEANYKPTFLSDDELKHLILRAADG 157
+ + +P F + K + AADG
Sbjct 133 SADDGQPCFRAAGSAKGAVPAAADG 157
>sp|P48986|NDF6_MOUSE Neurogenic differentiation factor 6 OS=Mus
musculus OX=10090 GN=Neurod6 PE=2 SV=1
Length=337
Score = 41.8 bits (96), Expect = 0.012, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (2%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
R+K R+ + E+ R +N +D L +VP C + ++KL K+ LR+A ++
Sbjct 91 RVKFRRQEANARERNRMHGLNDALDNLRKVVP-CYSKTQKLSKIETLRLAKNYI 143
>sp|O45489|HLH17_CAEEL Helix-loop-helix protein 17 OS=Caenorhabditis
elegans OX=6239 GN=hlh-17 PE=2 SV=3
Length=101
Score = 39.1 bits (89), Expect = 0.013, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMS-RKLDKLTVLRMAVQHM 122
R + + E+ R +N +D+L +++P + S RKL K+ L +A H+
Sbjct 16 RLSINLRERCRMHDLNEALDDLRAVIPYAHGGSVRKLSKIATLLLAKNHI 65
>sp|P49709|MYC_CARAU Transcriptional regulator Myc OS=Carassius
auratus OX=7957 GN=myc PE=3 SV=1
Length=399
Score = 42.2 bits (97), Expect = 0.013, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 47/128 (37%), Gaps = 8/128 (6%)
Query 12 ISDFMSPGPTDLLSSSLGTSG---VDCNRKRKGSSTDYQESMDTDKDDPHGRLEY----T 64
+SD P P L + T R + ++T + HG+
Sbjct 248 VSDSRYPSPLVLKRCHVSTHQHNYAAHPSTRHDQPAVKRLRLETSSSNRHGKQRKCTSPR 307
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ R H+ +E++RR+++ L +P A + K K+ +L+ A + + +
Sbjct 308 TSDSEDNDKRRTHNVLERQRRNELKLSFFALRDEIPEV-ANNEKAAKVVILKKATECIHS 366
Query 125 LRGATNPY 132
++
Sbjct 367 MQLDEQRL 374
>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis
thaliana OX=3702 GN=BHLH78 PE=1 SV=1
Length=498
Score = 42.2 bits (97), Expect = 0.013, Method: Composition-based stats.
Identities = 19/74 (26%), Positives = 36/74 (49%), Gaps = 3/74 (4%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
P +Y + R A ++HS E+ RR+K+ + L LVP CN ++ K +L
Sbjct 292 PEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTG---KALMLD 348
Query 117 MAVQHMKTLRGATN 130
+ ++++L+
Sbjct 349 EIINYVQSLQRQVE 362
>sp|A2AAJ9|OBSCN_MOUSE Obscurin OS=Mus musculus OX=10090 GN=Obscn
PE=1 SV=3
Length=8886
Score = 42.6 bits (98), Expect = 0.013, Method: Composition-based stats.
Identities = 21/126 (17%), Positives = 37/126 (29%), Gaps = 17/126 (13%)
Query 460 PHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGK---IGRMIAEEIMEI--HRIRGSSP 514
P S DS EG + + P + G+G G ++ + + ++
Sbjct 7961 PMSGDSRPGKQEGSSQDSCRGKPASSCHSELGSGSQEGCGPPSSQSLGSLPPQSLKKELS 8020
Query 515 SSCGSSPLNITSTPPPDASSPGGKKILNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILG 574
+SCG P + P +P + S + P SS G
Sbjct 8021 TSCG----------PLFSEQPQAAPFPTQVSPLLGSEKEPQDGSLSEGPVPVPSSSP--G 8068
Query 575 ENPHIG 580
+
Sbjct 8069 SASQVD 8074
>sp|Q08DI0|NDF6_BOVIN Neurogenic differentiation factor 6 OS=Bos
taurus OX=9913 GN=NEUROD6 PE=2 SV=1
Length=337
Score = 41.8 bits (96), Expect = 0.013, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (2%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
R+K R+ + E+ R +N +D L +VP C + ++KL K+ LR+A ++
Sbjct 91 RVKFRRQEANARERNRMHGLNDALDNLRKVVP-CYSKTQKLSKIETLRLAKNYI 143
>sp|Q4R5G6|NDF6_MACFA Neurogenic differentiation factor 6 OS=Macaca
fascicularis OX=9541 GN=NEUROD6 PE=2 SV=1
Length=337
Score = 41.8 bits (96), Expect = 0.014, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (2%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
R+K R+ + E+ R +N +D L +VP C + ++KL K+ LR+A ++
Sbjct 91 RVKFRRQEANARERNRMHGLNDALDNLRKVVP-CYSKTQKLSKIETLRLAKNYI 143
>sp|Q96NK8|NDF6_HUMAN Neurogenic differentiation factor 6 OS=Homo
sapiens OX=9606 GN=NEUROD6 PE=1 SV=1
Length=337
Score = 41.8 bits (96), Expect = 0.014, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (2%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
R+K R+ + E+ R +N +D L +VP C + ++KL K+ LR+A ++
Sbjct 91 RVKFRRQEANARERNRMHGLNDALDNLRKVVP-CYSKTQKLSKIETLRLAKNYI 143
>sp|P12524|MYCL_HUMAN Protein L-Myc OS=Homo sapiens OX=9606 GN=MYCL
PE=1 SV=2
Length=364
Score = 41.8 bits (96), Expect = 0.014, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMK 123
R+ H+ +E++RR+ + S L VPT A K K+ +L A+++++
Sbjct 273 VSSDTEDVTKRKNHNFLERKRRNDLRSRFLALRDQVPTL-ASCSKAPKVVILSKALEYLQ 331
Query 124 TLRGATNPYTEA 135
L GA
Sbjct 332 ALVGAEKRMATE 343
>sp|Q2R1J3|ILI2_ORYSJ Transcription factor ILI2 OS=Oryza sativa
subsp. japonica OX=39947 GN=ILI2 PE=3 SV=1
Length=101
Score = 39.1 bits (89), Expect = 0.014, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query 86 DKMNSFIDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLS 143
++M I +L +++PT A +++ VL+ A ++++ L + +E + L
Sbjct 22 EQMAELISKLQAVLPTRGGEANAKQASSAEVLQEACRYIRRLHREADALSERLAELLLLQ 81
Query 144 DDEL 147
+L
Sbjct 82 PSDL 85
>sp|B8BLA3|ILI2_ORYSI Transcription factor ILI2 OS=Oryza sativa
subsp. indica OX=39946 GN=ILI2 PE=3 SV=1
Length=101
Score = 39.1 bits (89), Expect = 0.014, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query 86 DKMNSFIDELASLVPTC--NAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLS 143
++M I +L +++PT A +++ VL+ A ++++ L + +E + L
Sbjct 22 EQMAELISKLQAVLPTRGGEANAKQASSAEVLQEACRYIRRLHREADALSERLAELLLLQ 81
Query 144 DDEL 147
+L
Sbjct 82 PSDL 85
>sp|Q00492|SUM1_LYTVA Transcription factor SUM-1 OS=Lytechinus
variegatus OX=7654 GN=SUM-1 PE=2 SV=1
Length=260
Score = 41.4 bits (95), Expect = 0.014, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 47/133 (35%), Gaps = 13/133 (10%)
Query 32 GVDCNRKRKGSSTDYQESMDTDKDDPHGR-----LEYTEHQGRIKN----AREAHSQIEK 82
G D G S E HG+ L + + KN R+A + E+
Sbjct 63 GSDSANSSPGESCREDELEHVLAPGFHGQGERRCLMWACKACKRKNVAVDKRKAATLRER 122
Query 83 RRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFL 142
RR K+N + L TC +++L K+ +LR A+++++ L +
Sbjct 123 RRLRKVNEAFEALKRH--TCANPNQRLPKVEILRNAIEYIEKLERLLQVEKANGDSE--M 178
Query 143 SDDELKHLILRAA 155
E A
Sbjct 179 DSAETSSNTSDAM 191
>sp|P12523|MYC_AVIOK Viral myc transforming protein OS=Avian retrovirus
OK10 OX=11871 GN=MYC PE=3 SV=1
Length=416
Score = 41.8 bits (96), Expect = 0.015, Method: Composition-based stats.
Identities = 15/89 (17%), Positives = 40/89 (45%), Gaps = 2/89 (2%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ R H+ +E++RR+++ L +P A + K K+ +L+ A +++ +
Sbjct 324 TSDSEENDKRRMHNVLERQRRNELKLSFFALRDQIPEV-ANNEKAPKVVILKKATEYVLS 382
Query 125 LRGATNPYTEANYKPTFLSDDELKHLILR 153
++ + + ++LKH + +
Sbjct 383 IQSDEHRLIAEK-EQLRRRREQLKHKLEQ 410
>sp|Q05195|MAD1_HUMAN Max dimerization protein 1 OS=Homo sapiens
OX=9606 GN=MXD1 PE=1 SV=1
Length=221
Score = 41.0 bits (94), Expect = 0.015, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 40/99 (40%), Gaps = 1/99 (1%)
Query 37 RKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELA 96
R+ + + Y + + D + + ++R H+++EK RR + +++L
Sbjct 21 RREREAEHGYASMLPYNNKDRDALKRRNKSKKNNSSSRSTHNEMEKNRRAHLRLCLEKLK 80
Query 97 SLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA 135
LVP SR L++L A H+K L
Sbjct 81 GLVPLGPESSRHT-TLSLLTKAKLHIKKLEDCDRKAVHQ 118
>sp|Q9MZT9|MYC_TUPGL Myc proto-oncogene protein OS=Tupaia glis
OX=9395 GN=MYC PE=3 SV=1
Length=439
Score = 41.8 bits (96), Expect = 0.015, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 40/94 (43%), Gaps = 6/94 (6%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
R TE + R H+ +E++RR+++ L +P + K K+ +L+ A
Sbjct 346 RSSDTEENDK----RRTHNVLERQRRNELKRSFFALRDQIPELEN-NEKAPKVVILKKAT 400
Query 120 QHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
++ +++ + ++LKH + +
Sbjct 401 AYILSVQAEEQKLI-SEKDLLRKRREQLKHKLEQ 433
>sp|Q9MZU0|MYC_GALVR Myc proto-oncogene protein OS=Galeopterus
variegatus OX=482537 GN=MYC PE=3 SV=1
Length=439
Score = 41.8 bits (96), Expect = 0.015, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 40/94 (43%), Gaps = 6/94 (6%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
R TE + R H+ +E++RR+++ L +P + K K+ +L+ A
Sbjct 346 RSSDTEENDK----RRTHNVLERQRRNELKRSFFALRDQIPELEN-NEKAPKVVILKKAT 400
Query 120 QHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
++ +++ + ++LKH + +
Sbjct 401 AYILSVQAEEQKLI-SEKDLLRKRREQLKHKLEQ 433
>sp|Q64124|SCX_MOUSE Basic helix-loop-helix transcription factor
scleraxis OS=Mus musculus OX=10090 GN=Scx PE=1 SV=1
Length=207
Score = 41.0 bits (94), Expect = 0.015, Method: Composition-based stats.
Identities = 23/112 (21%), Positives = 42/112 (38%), Gaps = 3/112 (3%)
Query 16 MSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNARE 75
+SP D S + + + + Q + + R+
Sbjct 20 VSPLSEDEDRGSESSGSDEKPCRVHAARCGLQGARRRAGGRRAAGSGPGPGGRPGREPRQ 79
Query 76 AH--SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
H + E+ R + +N+ L +L+PT A RKL K+ LR+A ++ L
Sbjct 80 RHTANARERDRTNSVNTAFTALRTLIPTEPAD-RKLSKIETLRLASSYISHL 130
>sp|Q28566|MYC_SHEEP Myc proto-oncogene protein OS=Ovis aries
OX=9940 GN=MYC PE=2 SV=1
Length=439
Score = 41.8 bits (96), Expect = 0.016, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 5/76 (7%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
R TE + R H+ +E++RR+++ L +P + K K+ +L+ A
Sbjct 346 RSSDTEENDK----RRTHNVLERQRRNELKRSFFALRDQIPELEN-NEKAPKVVILKKAT 400
Query 120 QHMKTLRGATNPYTEA 135
++ +++
Sbjct 401 AYILSVQAEEQKLISE 416
>sp|Q8AW52|ATOH7_DANRE Transcription factor atoh7 OS=Danio rerio
OX=7955 GN=atoh7 PE=1 SV=1
Length=134
Score = 39.5 bits (90), Expect = 0.016, Method: Composition-based stats.
Identities = 17/72 (24%), Positives = 28/72 (39%), Gaps = 1/72 (1%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMK 123
E R A + E++R +N+ D L +VP KL K L+MA+ ++
Sbjct 20 PEKFESAMRRRMAANARERKRMQGLNTAFDRLRKVVPQWGQDK-KLSKYETLQMALSYIM 78
Query 124 TLRGATNPYTEA 135
L +
Sbjct 79 ALNRILSDAGRH 90
>sp|P06646|MYC_ONCMY Transcriptional regulator Myc (Fragment)
OS=Oncorhynchus mykiss OX=8022 GN=myc PE=3 SV=1
Length=414
Score = 41.8 bits (96), Expect = 0.016, Method: Composition-based stats.
Identities = 17/95 (18%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query 38 KRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELAS 97
+ + SS+ + + +++ R TE + R H+ +E++RR+++ L
Sbjct 294 RLENSSSRVLKQISSNRKCSSPRTSDTEDYDK----RRTHNVLERQRRNELKLSFFALRD 349
Query 98 LVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
+P A + K K+ +L+ A + + +++
Sbjct 350 EIPDV-ANNEKAAKVVILKKATECIYSMQTDEQRL 383
>sp|P50539|MXI1_HUMAN Max-interacting protein 1 OS=Homo sapiens
OX=9606 GN=MXI1 PE=1 SV=2
Length=228
Score = 41.0 bits (94), Expect = 0.016, Method: Composition-based stats.
Identities = 17/79 (22%), Positives = 29/79 (37%), Gaps = 1/79 (1%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
+ + R H+++EK RR + ++ L L+P +R L +L
Sbjct 52 SRAQKHSSGSSNTSTANRSTHNELEKNRRAHLRLCLERLKVLIPLGPDCTRHT-TLGLLN 110
Query 117 MAVQHMKTLRGATNPYTEA 135
A H+K L A
Sbjct 111 KAKAHIKKLEEAERKSQHQ 129
>sp|Q90477|MYOD1_DANRE Myoblast determination protein 1 homolog
OS=Danio rerio OX=7955 GN=myod1 PE=1 SV=2
Length=275
Score = 41.4 bits (95), Expect = 0.017, Method: Composition-based stats.
Identities = 16/73 (22%), Positives = 36/73 (49%), Gaps = 2/73 (3%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ + + R+A + E+RR K+N + L T +++L K+ +LR A+ ++++
Sbjct 77 KRKTTNADRRKAATMRERRRLSKVNDAFETLKRC--TSTNPNQRLPKVEILRNAISYIES 134
Query 125 LRGATNPYTEANY 137
L+ + Y
Sbjct 135 LQALLRSQEDNYY 147
>sp|P20428|MYOG_RAT Myogenin OS=Rattus norvegicus OX=10116 GN=Myog
PE=1 SV=1
Length=287
Score = 41.4 bits (95), Expect = 0.017, Method: Composition-based stats.
Identities = 17/64 (27%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
R A + EKRR K+N + L T +++L K+ +LR A+Q+++ L+ +
Sbjct 82 RRRAATLREKRRLKKVNEAFEALKR--STLLNPNQRLPKVEILRSAIQYIERLQALLSSL 139
Query 133 TEAN 136
+
Sbjct 140 NQEE 143
>sp|Q9UL49|TCFL5_HUMAN Transcription factor-like 5 protein OS=Homo
sapiens OX=9606 GN=TCFL5 PE=1 SV=2
Length=500
Score = 41.8 bits (96), Expect = 0.017, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 8/102 (8%)
Query 40 KGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLV 99
+G+ + S G + QG RE H+++E+ RR ++ DEL LV
Sbjct 373 QGAWQSSESS-----QANLGEQAQSGPQGGRSQRRERHNRMERDRRRRIRICCDELNLLV 427
Query 100 PTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTF 141
P CNA + DK T L+ +K ++ + ++ F
Sbjct 428 PFCNAET---DKATTLQWTTAFLKYIQERHGDSLKKEFESVF 466
>sp|P10166|MYCL_MOUSE Protein L-Myc OS=Mus musculus OX=10090 GN=Mycl
PE=2 SV=1
Length=368
Score = 41.8 bits (96), Expect = 0.017, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMK 123
R+ H+ +E++RR+ + S L VPT A K K+ +L A+++++
Sbjct 277 VSSDTEDVTKRKNHNFLERKRRNDLRSRFLALRDQVPTL-ASCSKAPKVVILSKALEYLQ 335
Query 124 TLRGATNPYTEA 135
L GA
Sbjct 336 ALVGAEKKMATE 347
>sp|Q8VIP2|MLXPL_RAT Carbohydrate-responsive element-binding protein
OS=Rattus norvegicus OX=10116 GN=Mlxipl PE=1 SV=1
Length=865
Score = 42.2 bits (97), Expect = 0.017, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query 68 GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSR-KLDKLTVLRMAVQHMKTLR 126
+++N R H E++RR + D L LV T +A K+ K T L+ +++ L+
Sbjct 658 NKMENRRITHISAEQKRRFNIKLGFDTLHGLVSTLSAQPSLKVSKATTLQKTAEYILMLQ 717
Query 127 GATNPYTEANYK 138
E +
Sbjct 718 QERAAMQEEAQQ 729
>sp|Q2HJ27|MYC_BOVIN Myc proto-oncogene protein OS=Bos taurus
OX=9913 GN=MYC PE=2 SV=1
Length=439
Score = 41.8 bits (96), Expect = 0.017, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 5/76 (7%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
R TE + R H+ +E++RR+++ L +P + K K+ +L+ A
Sbjct 346 RSSDTEENDK----RRTHNVLERQRRNELKRSFFALRDQIPELEN-NEKAPKVVILKKAT 400
Query 120 QHMKTLRGATNPYTEA 135
++ +++
Sbjct 401 AYILSVQAEQQKLKSE 416
>sp|Q9W6C8|NDF2_DANRE Neurogenic differentiation factor 2 OS=Danio
rerio OX=7955 GN=neurod2 PE=2 SV=1
Length=363
Score = 41.4 bits (95), Expect = 0.017, Method: Composition-based stats.
Identities = 18/61 (30%), Positives = 31/61 (51%), Gaps = 1/61 (2%)
Query 62 EYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQH 121
R K R+ + E+ R +NS +D L +VP C + ++KL K+ LR+A +
Sbjct 97 MTPARLERSKVRRQKANARERTRMHDLNSALDNLLKVVP-CYSKTQKLSKIETLRLAKNY 155
Query 122 M 122
+
Sbjct 156 I 156
>sp|P18444|MYCN_CHICK N-myc proto-oncogene protein OS=Gallus gallus
OX=9031 GN=MYCN PE=3 SV=1
Length=441
Score = 41.8 bits (96), Expect = 0.017, Method: Composition-based stats.
Identities = 14/67 (21%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query 66 HQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
R H+ +E++RR+ + S L VP + K K+ +L+ A +++ +L
Sbjct 352 SDSEDSERRRNHNILERQRRNDLRSSFLTLRDHVPEL-VKNEKAAKVVILKKATEYVHSL 410
Query 126 RGATNPY 132
+
Sbjct 411 QAEEQKL 417
>sp|P48985|ATOH1_MOUSE Transcription factor Atoh1 OS=Mus musculus
OX=10090 GN=Atoh1 PE=1 SV=1
Length=351
Score = 41.4 bits (95), Expect = 0.017, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
K R A + E+RR +N D+L +++P+ N KL K L+MA ++ L
Sbjct 155 KQRRLAANARERRRMHGLNHAFDQLRNVIPSFNNDK-KLSKYETLQMAQIYINALSELLQ 213
Query 131 PYTEANYKPTFLSDDELKHLILRAADGF 158
P + + H LR A +
Sbjct 214 TPNVGEQPPPPTASCKNDHHHLRTASSY 241
>sp|Q99MZ3|MLXPL_MOUSE Carbohydrate-responsive element-binding
protein OS=Mus musculus OX=10090 GN=Mlxipl PE=1 SV=1
Length=864
Score = 42.2 bits (97), Expect = 0.018, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query 68 GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSR-KLDKLTVLRMAVQHMKTLR 126
+++N R H E++RR + D L LV T +A K+ K T L+ +++ L+
Sbjct 657 NKMENRRITHISAEQKRRFNIKLGFDTLHGLVSTLSAQPSLKVSKATTLQKTAEYILMLQ 716
Query 127 GATNPYTEANYK 138
E +
Sbjct 717 QERAAMQEEAQQ 728
>sp|Q90341|MYC1_CYPCA Transcriptional regulator Myc-1 OS=Cyprinus
carpio OX=7962 GN=myca PE=3 SV=1
Length=394
Score = 41.4 bits (95), Expect = 0.018, Method: Composition-based stats.
Identities = 18/106 (17%), Positives = 41/106 (39%), Gaps = 5/106 (5%)
Query 27 SLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRD 86
S R R +S++ + R +E + R H+ +E++RR+
Sbjct 269 STRHDQPAVKRLRLEASSNSNSRHVKQRKCTSPRTSDSEDNDK----RRTHNVLERQRRN 324
Query 87 KMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
++ L +P A + K K+ +L+ A + + +++
Sbjct 325 ELKLSFFALRDEIPDV-ANNEKAAKVVILKKATECIHSMQLDEQRL 369
>sp|Q9LS08|BH032_ARATH Transcription factor AIG1 OS=Arabidopsis
thaliana OX=3702 GN=BHLH32 PE=1 SV=1
Length=344
Score = 41.4 bits (95), Expect = 0.018, Method: Composition-based stats.
Identities = 39/170 (23%), Positives = 72/170 (42%), Gaps = 28/170 (16%)
Query 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
+ A ++HS+ E+RRR+++N+ + +L S++P + K DK ++L +QHMK L+
Sbjct 126 DAKALAASKSHSEAERRRRERINTHLAKLRSILP----NTTKTDKASLLAEVIQHMKELK 181
Query 127 GATNPYTEANYKPTFLSD--------DELKHLILRAADGFLFVVGCDRGKILFVSESVFK 178
T+ T+ PT D DE +L++RA F DR ++ + K
Sbjct 182 RQTSQITDTYQVPTECDDLTVDSSYNDEEGNLVIRA--SFCC---QDRTDLMHDVINALK 236
Query 179 ILNYS----QNDLIGQSLFDYL-------HPKDIAKVKEQLSSSDTAPRE 217
L + +G + + L +D + D +
Sbjct 237 SLRLRTLKAEIATVGGRVKNILFLSREYDDEEDHDSYRRNFDGDDVEDYD 286
>sp|Q9FIX5|BH092_ARATH Transcription factor bHLH92 OS=Arabidopsis
thaliana OX=3702 GN=BHLH92 PE=1 SV=1
Length=247
Score = 41.0 bits (94), Expect = 0.018, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 30/70 (43%), Gaps = 7/70 (10%)
Query 60 RLEYTEHQGRIKNAREAHSQI---EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
R + E + + +E + E+ RR+K L SL+P K DK +++
Sbjct 70 RKNWEEKKNTVAPEKERSRRHMLKERTRREKQKQSYLALHSLLPFA----TKNDKNSIVE 125
Query 117 MAVQHMKTLR 126
AV + L+
Sbjct 126 KAVDEIAKLQ 135
>sp|P68272|MYC_FLV Viral myc transforming protein OS=Feline leukemia
virus OX=11768 GN=MYC PE=3 SV=1
Length=439
Score = 41.8 bits (96), Expect = 0.018, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 40/94 (43%), Gaps = 6/94 (6%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
R TE + R H+ +E++RR+++ L +P + K K+ +L+ A
Sbjct 346 RSSDTEENDK----RRTHNVLERQRRNELKRSFFALRDQIPELEN-NEKAPKVVILKKAT 400
Query 120 QHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
++ +++ + ++LKH + +
Sbjct 401 AYILSVQAGEQKLI-SEKDLLRKRREQLKHKLEQ 433
>sp|P68271|MYC_FELCA Myc proto-oncogene protein OS=Felis catus
OX=9685 GN=MYC PE=3 SV=1
Length=439
Score = 41.8 bits (96), Expect = 0.018, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 40/94 (43%), Gaps = 6/94 (6%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
R TE + R H+ +E++RR+++ L +P + K K+ +L+ A
Sbjct 346 RSSDTEENDK----RRTHNVLERQRRNELKRSFFALRDQIPELEN-NEKAPKVVILKKAT 400
Query 120 QHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
++ +++ + ++LKH + +
Sbjct 401 AYILSVQAGEQKLI-SEKDLLRKRREQLKHKLEQ 433
>sp|P15939|NODV_BRADU Nodulation protein V OS=Bradyrhizobium diazoefficiens
(strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC
14792 / USDA 110) OX=224911 GN=nodV PE=4 SV=1
Length=889
Score = 41.8 bits (96), Expect = 0.019, Method: Composition-based stats.
Identities = 18/79 (23%), Positives = 33/79 (42%), Gaps = 0/79 (0%)
Query 345 AIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCY 404
G + V+ L + ELLG S + F ++D + +C + L+ + T
Sbjct 151 DEAGIVLNVNTLGATQLGFACAELLGQSVLDVFLEEDRAFVRKCIQTCLEDVGQSRTWDV 210
Query 405 KFKIKDGSFITLRSRWFSF 423
+ KDGS + +R +
Sbjct 211 RKVRKDGSVLWVRENAKAM 229
>sp|Q56XR0|BH071_ARATH Transcription factor bHLH71 OS=Arabidopsis
thaliana OX=3702 GN=BHLH71 PE=1 SV=1
Length=327
Score = 41.4 bits (95), Expect = 0.019, Method: Composition-based stats.
Identities = 17/55 (31%), Positives = 30/55 (55%), Gaps = 2/55 (4%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
+N R H +E+ RR +MN + L SL+P + K D+ +++ A+ +K L
Sbjct 84 ENQRMTHIAVERNRRRQMNQHLSVLRSLMPQP--FAHKGDQASIVGGAIDFIKEL 136
>sp|Q7YS81|MYOG_BOVIN Myogenin OS=Bos taurus OX=9913 GN=MYOG PE=2
SV=2
Length=224
Score = 40.7 bits (93), Expect = 0.019, Method: Composition-based stats.
Identities = 17/64 (27%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
R A + EKRR K+N + L T +++L K+ +LR A+Q+++ L+ +
Sbjct 82 RRRAATLREKRRLKKVNEAFEALKR--STLLNPNQRLPKVEILRSAIQYIERLQALLSSL 139
Query 133 TEAN 136
+
Sbjct 140 NQEE 143
>sp|Q9TZ70|MXL2_CAEEL Max-like protein homolog 2 OS=Caenorhabditis
elegans OX=6239 GN=mxl-2 PE=1 SV=1
Length=205
Score = 40.7 bits (93), Expect = 0.020, Method: Composition-based stats.
Identities = 15/56 (27%), Positives = 27/56 (48%), Gaps = 1/56 (2%)
Query 72 NAREAHSQIEKRRRDKMNSFIDELASLVP-TCNAMSRKLDKLTVLRMAVQHMKTLR 126
+ H + E++RR+ +NS +L L+P T ++ K +L A M L+
Sbjct 47 RKKATHLRCERQRREAINSGYSDLKDLIPQTTTSLGCKTTNAAILFRACDFMSQLK 102
>sp|Q9MZT7|MYC_TADBR Myc proto-oncogene protein OS=Tadarida brasiliensis
OX=9438 GN=MYC PE=3 SV=1
Length=439
Score = 41.4 bits (95), Expect = 0.020, Method: Composition-based stats.
Identities = 14/89 (16%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ R H+ +E++RR+++ L +P + K K+ +L+ A ++
Sbjct 347 SSDSEENDKRRTHNVLERQRRNELKRSFFALRDQIPELEN-NEKAPKVVILKKATAYILA 405
Query 125 LRGATNPYTEANYKPTFLSDDELKHLILR 153
++ + ++LKH + +
Sbjct 406 IQAEEQKLI-SEKDLLRKRREQLKHKLEQ 433
>sp|Q61976|MYCN_MARMO N-myc proto-oncogene protein OS=Marmota
monax OX=9995 GN=MYCN PE=3 SV=1
Length=460
Score = 41.4 bits (95), Expect = 0.020, Method: Composition-based stats.
Identities = 18/87 (21%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Query 66 HQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
R H+ +E++RR+ + S L VP + K K+ +L+ A +++ +L
Sbjct 371 SDSEDSERRRNHNILERQRRNDLRSSFLTLRDHVPEL-VKNEKAAKVVILKKATEYVHSL 429
Query 126 RGATNPYTEANYKPTFLSDDELKHLIL 152
+ + K LK + L
Sbjct 430 QAEEHQLLLEKEKLQARQQQLLKKIEL 456
>sp|Q6NYU3|NDF6A_DANRE Neurogenic differentiation factor 6-A OS=Danio
rerio OX=7955 GN=neurod6a PE=2 SV=1
Length=327
Score = 41.4 bits (95), Expect = 0.021, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (2%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
P + R+K R + E+ R +N+ +D L +VP C + ++KL K+ LR
Sbjct 73 PRKKKMTKARVDRVKVRRMEANARERNRMHGLNNALDSLRKVVP-CYSKTQKLSKIETLR 131
Query 117 MAVQHM 122
+A ++
Sbjct 132 LAKNYI 137
>sp|O09015|MXI1_RAT Max-interacting protein 1 OS=Rattus norvegicus
OX=10116 GN=Mxi1 PE=2 SV=1
Length=228
Score = 40.7 bits (93), Expect = 0.021, Method: Composition-based stats.
Identities = 17/79 (22%), Positives = 29/79 (37%), Gaps = 1/79 (1%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
+ + R H+++EK RR + ++ L L+P +R L +L
Sbjct 52 SRAQKHSSGSSNTSTANRSTHNELEKNRRAHLRLCLERLKVLIPLGPDCTRHT-TLGLLN 110
Query 117 MAVQHMKTLRGATNPYTEA 135
A H+K L A
Sbjct 111 KAKAHIKKLEEAERKSQHQ 129
>sp|Q28350|MYC_CANLF Myc proto-oncogene protein OS=Canis lupus
familiaris OX=9615 GN=MYC PE=2 SV=2
Length=452
Score = 41.4 bits (95), Expect = 0.021, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 40/94 (43%), Gaps = 6/94 (6%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
R TE + R H+ +E++RR+++ L +P + K K+ +L+ A
Sbjct 359 RSSDTEENDK----RRTHNVLERQRRNELKRSFFALRDQIPELEN-NEKAPKVVILKKAT 413
Query 120 QHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
++ +++ + ++LKH + +
Sbjct 414 AYILSVQAEEQKLL-SEKDLLRKRREQLKHKLEQ 446
>sp|Q4ZHW1|PTF1A_XENLA Pancreas transcription factor 1 subunit
alpha OS=Xenopus laevis OX=8355 GN=ptf1a PE=2 SV=1
Length=270
Score = 41.0 bits (94), Expect = 0.022, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (2%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
R ++ R+A + E+RR +N + L S +PT ++L K+ LR+A+
Sbjct 107 RRRRLRSDAEMQQLRQAANVRERRRMQSINDAFEGLRSHIPTL-PYEKRLSKVDTLRLAI 165
Query 120 QHM 122
++
Sbjct 166 GYI 168
>sp|P79765|NDF1_CHICK Neurogenic differentiation factor 1 OS=Gallus
gallus OX=9031 GN=NEUROD1 PE=2 SV=1
Length=357
Score = 41.4 bits (95), Expect = 0.022, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 30/54 (56%), Gaps = 1/54 (2%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
R K R + E+ R +N+ +D L +VP C + ++KL K+ LR+A ++
Sbjct 101 RFKLRRMKANARERNRMHGLNAALDNLRKVVP-CYSKTQKLSKIETLRLAKNYI 153
>sp|P50540|MXI1_MOUSE Max-interacting protein 1 OS=Mus musculus
OX=10090 GN=Mxi1 PE=1 SV=1
Length=228
Score = 40.7 bits (93), Expect = 0.022, Method: Composition-based stats.
Identities = 17/79 (22%), Positives = 29/79 (37%), Gaps = 1/79 (1%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
+ + R H+++EK RR + ++ L L+P +R L +L
Sbjct 52 SRAQKHSSGSSNTSTANRSTHNELEKNRRAHLRLCLERLKVLIPLGPDCTRHT-TLGLLN 110
Query 117 MAVQHMKTLRGATNPYTEA 135
A H+K L A
Sbjct 111 KAKAHIKKLEEAERKSQHQ 129
>sp|Q9HD90|NDF4_HUMAN Neurogenic differentiation factor 4 OS=Homo
sapiens OX=9606 GN=NEUROD4 PE=1 SV=2
Length=331
Score = 41.0 bits (94), Expect = 0.022, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
R + R + E+ R +N +D L ++P C + ++KL K+ LR+A ++ L
Sbjct 84 RFRARRVKANARERTRMHGLNDALDNLRRVMP-CYSKTQKLSKIETLRLARNYIWALSEV 142
Query 129 TNPYTEANYK 138
K
Sbjct 143 LETGQTPEGK 152
>sp|Q7RTU3|OLIG3_HUMAN Oligodendrocyte transcription factor 3
OS=Homo sapiens OX=9606 GN=OLIG3 PE=1 SV=2
Length=272
Score = 41.0 bits (94), Expect = 0.022, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 44/109 (40%), Gaps = 2/109 (2%)
Query 27 SLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRD 86
S+ ++ D +K G S + + + + Q ++ R + E++R
Sbjct 39 SVSSTQGDMMQKMPGESLSRAGAKAAGESSKYKIKKQLSEQD-LQQLRLKINGRERKRMH 97
Query 87 KMNSFIDELASLVPTCNAMS-RKLDKLTVLRMAVQHMKTLRGATNPYTE 134
+N +D L ++P + S RKL K+ L +A ++ L +
Sbjct 98 DLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLEEMKR 146
>sp|P13903|TWIST_XENLA Twist-related protein OS=Xenopus laevis
OX=8355 GN=twist1 PE=2 SV=1
Length=166
Score = 39.9 bits (91), Expect = 0.022, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Query 32 GVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQ-GRIKNAREAHSQIEKRRRDKMNS 90
G R + S D + ++ + +++ R + E++R +N
Sbjct 31 GCRKRRSARKSPEDPDSPISVKRNKKASSTGSSPQSFEELQSQRVMANVRERQRTQSLNE 90
Query 91 FIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
L ++PT S KL K+ L++A +++
Sbjct 91 AFSSLRKIIPT--LPSDKLSKIQTLKLASRYI 120
>sp|P22555|MYC_MARMO Myc proto-oncogene protein OS=Marmota monax
OX=9995 GN=MYC PE=2 SV=2
Length=439
Score = 41.4 bits (95), Expect = 0.023, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 5/76 (7%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
R TE + R H+ +E++RR+++ L +P + K K+ +L+ A
Sbjct 346 RSSDTEENDK----RRTHNVLERQRRNELKRSFFALRDQIPELEN-NEKAPKVIILKKAT 400
Query 120 QHMKTLRGATNPYTEA 135
++ +++
Sbjct 401 AYILSVQAEEQKLISE 416
>sp|Q9MZT8|MYC_PTEHP Myc proto-oncogene protein OS=Pteropus hypomelanus
OX=9405 GN=MYC PE=3 SV=1
Length=440
Score = 41.4 bits (95), Expect = 0.023, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
R TE + R H+ +E++RR+++ L +P + K K+ +L+ A
Sbjct 347 RSSDTEENDK----RRTHNVLERQRRNELKRSFFALRDQIPELEN-NEKAPKVVILKKAT 401
Query 120 QHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
++ ++ + ++LKH + +
Sbjct 402 AYILAIQAEEQKLI-SEKDLLRKRREQLKHKLEQ 434
>sp|Q9TX44|TWIST_DROVI Protein twist OS=Drosophila virilis OX=7244
GN=twi PE=3 SV=2
Length=519
Score = 41.4 bits (95), Expect = 0.023, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 8/100 (8%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMK 123
TE N R + E++R +N L ++PT S KL K+ L++A +++
Sbjct 382 TEETDEFSNQRVMANVRERQRTQSLNDAFKALQQIIPT--LPSDKLSKIQTLKLATRYID 439
Query 124 TLRGATNPYTEANYKPTFLSDDELKH------LILRAADG 157
L + + K + +L AA+G
Sbjct 440 FLCRMLSSSDISLLKALEAQSSPVSPGYGNASTLLSAANG 479
>sp|Q8BGW3|BHE23_MOUSE Class E basic helix-loop-helix protein
23 OS=Mus musculus OX=10090 GN=Bhlhe23 PE=2 SV=1
Length=223
Score = 40.7 bits (93), Expect = 0.023, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 40/99 (40%), Gaps = 4/99 (4%)
Query 38 KRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAH---SQIEKRRRDKMNSFIDE 94
+ G + ++ + G + + R + R + E+RR +N +D
Sbjct 61 ESSGEQSGDEDEAFERRRRRRGSGVAVDARRRPREQRSLRLSINARERRRMHDLNDALDG 120
Query 95 LASLVPTCNAMS-RKLDKLTVLRMAVQHMKTLRGATNPY 132
L +++P ++ S RKL K+ L +A ++ A
Sbjct 121 LRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAQALEEM 159
>sp|P34474|HLH11_CAEEL Helix-loop-helix protein 11 OS=Caenorhabditis
elegans OX=6239 GN=hlh-11 PE=1 SV=3
Length=431
Score = 41.4 bits (95), Expect = 0.024, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 33/85 (39%), Gaps = 2/85 (2%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ R + R+ + E+RR +N+ L +L+P KL K +L+ +
Sbjct 105 DPDRRSRMRRQIANCNERRRMQSINAGFLALRALLPRKEGE--KLSKAAILQQTADMVHQ 162
Query 125 LRGATNPYTEANYKPTFLSDDELKH 149
L G +P L +E H
Sbjct 163 LLGHKGEDIPDGGEPKKLKLEEDHH 187
>sp|Q1LWL8|MCL1B_DANRE Protein L-Myc-1b OS=Danio rerio OX=7955
GN=mycl1b PE=2 SV=1
Length=404
Score = 41.0 bits (94), Expect = 0.025, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 51/136 (38%), Gaps = 25/136 (18%)
Query 5 RMDISSTISDFMSPGPTDL-----LSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHG 59
R+ + + SP P+ + S + + K + SS + DTDK
Sbjct 268 RLASTPQTPERKSPLPSPSVPAQSPTVSASPTHTSYHLKSQPSSPQSSDCEDTDK----- 322
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
R+ H+ +E++RR+ + S L +P + K+ +L A
Sbjct 323 --------------RKTHNFLERKRRNDLRSRFLALRDEIPGLVDCPKTP-KVVILTKAT 367
Query 120 QHMKTLRGATNPYTEA 135
++++TL + +
Sbjct 368 EYLRTLHVSDRQKAQE 383
>sp|Q8KIY1|TMOS_PSEME Sensor histidine kinase TmoS OS=Pseudomonas
mendocina OX=300 GN=tmoS PE=1 SV=1
Length=973
Score = 41.4 bits (95), Expect = 0.025, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Query 345 AIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCY 404
+ + + + I Y ++L S + ++ + + ++LQ+ +
Sbjct 630 DTENRILNANPAFQRITGYTEKDLAQLSMEQLTPPNERTQMKQRLARLLQSGGAEYSVEC 689
Query 405 KFKIKDGSFITLRSRWFSFMNPWTKEVEYIV 435
+ K+GS I + M+P E + I+
Sbjct 690 SYLCKNGSTIWANASVSL-MSPRVDEPQVIL 719
>sp|Q8C6A8|BHE22_MOUSE Class E basic helix-loop-helix protein
22 OS=Mus musculus OX=10090 GN=Bhlhe22 PE=1 SV=1
Length=355
Score = 41.0 bits (94), Expect = 0.025, Method: Composition-based stats.
Identities = 18/63 (29%), Positives = 31/63 (49%), Gaps = 1/63 (2%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMS-RKLDKLTVLRMAVQHMKTLRGAT 129
K R + E+RR +N +DEL +++P ++ S RKL K+ L +A ++ A
Sbjct 215 KALRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAQAL 274
Query 130 NPY 132
Sbjct 275 EEM 277
>sp|Q6PFG8|OLIG3_MOUSE Oligodendrocyte transcription factor 3
OS=Mus musculus OX=10090 GN=Olig3 PE=2 SV=1
Length=273
Score = 40.7 bits (93), Expect = 0.025, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 44/109 (40%), Gaps = 2/109 (2%)
Query 27 SLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRD 86
S+ ++ D +K G S + + + + Q ++ R + E++R
Sbjct 40 SVSSTQGDMVQKMPGESLSRAGAKAAGESSKYKIKKQLSEQD-LQQLRLKINGRERKRMH 98
Query 87 KMNSFIDELASLVPTCNAMS-RKLDKLTVLRMAVQHMKTLRGATNPYTE 134
+N +D L ++P + S RKL K+ L +A ++ L +
Sbjct 99 DLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLEEMKR 147
>sp|Q6GNB7|TCF21_XENLA Transcription factor 21 OS=Xenopus laevis
OX=8355 GN=tcf21 PE=2 SV=1
Length=179
Score = 39.9 bits (91), Expect = 0.026, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 40/98 (41%), Gaps = 5/98 (5%)
Query 30 TSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMN 89
+S D +KG T + + K P G + Q + R A + E+ R ++
Sbjct 41 SSTCDNGSPKKGRGTSGKRRKASSKKSPLGTINQEGKQVQ----RNAANARERARMRVLS 96
Query 90 SFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
L + +P + KL KL LR+A ++ LR
Sbjct 97 KAFSRLKTTLPWVPPDT-KLSKLDTLRLASSYIAHLRQ 133
>sp|O13126|ATO7B_XENLA Transcription factor Atoh7-b OS=Xenopus
laevis OX=8355 GN=atoh7-b PE=1 SV=1
Length=138
Score = 39.1 bits (89), Expect = 0.026, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 36/100 (36%), Gaps = 2/100 (2%)
Query 63 YTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
R A + E+RR +N+ D L +VP KL K L+MA+ ++
Sbjct 24 MPARLEGSTKRRLAANARERRRMQGLNTAFDSLRKVVPQWGEDK-KLSKYETLQMALSYI 82
Query 123 KTL-RGATNPYTEANYKPTFLSDDELKHLILRAADGFLFV 161
L R T + P + H+ ++ V
Sbjct 83 MALSRILTEAERYSRTDPGEWTKMHFDHIQEEQCLSYMGV 122
>sp|Q9XX00|SRBPH_CAEEL Sterol regulatory element binding protein
sbp-1 OS=Caenorhabditis elegans OX=6239 GN=sbp-1 PE=2 SV=1
Length=1113
Score = 41.4 bits (95), Expect = 0.026, Method: Composition-based stats.
Identities = 17/52 (33%), Positives = 23/52 (44%), Gaps = 3/52 (6%)
Query 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMA 118
+ R AH+ IEK+ R +N I +L L+ KL K LR A
Sbjct 350 RRPKTERRTAHNLIEKKYRCSINDRIQQLKVLL---CGDEAKLSKSATLRRA 398
>sp|O09029|BHE22_MESAU Class E basic helix-loop-helix protein
22 OS=Mesocricetus auratus OX=10036 GN=BHLHE22 PE=2 SV=2
Length=365
Score = 41.0 bits (94), Expect = 0.026, Method: Composition-based stats.
Identities = 18/63 (29%), Positives = 31/63 (49%), Gaps = 1/63 (2%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMS-RKLDKLTVLRMAVQHMKTLRGAT 129
K R + E+RR +N +DEL +++P ++ S RKL K+ L +A ++ A
Sbjct 225 KALRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAQAL 284
Query 130 NPY 132
Sbjct 285 EEM 287
>sp|B0XU60|DEVR_ASPFC Basic helix-loop-helix transcription factor
devR OS=Aspergillus fumigatus (strain CBS 144.89 / FGSC
A1163 / CEA10) OX=451804 GN=devR PE=2 SV=1
Length=525
Score = 41.4 bits (95), Expect = 0.026, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 28/74 (38%), Gaps = 2/74 (3%)
Query 63 YTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
+ R R H E++RR +M + L +P + + K K L A++++
Sbjct 362 SSTPYSRTPELRVTHKLAERKRRSEMKDCFEALRMRLP--QSQNNKSSKWETLTRAIEYI 419
Query 123 KTLRGATNPYTEAN 136
L + N
Sbjct 420 GQLEKMLSNARREN 433
>sp|F4I4E1|BH167_ARATH Transcription factor bHLH167 OS=Arabidopsis
thaliana OX=3702 GN=BHLH167 PE=2 SV=1
Length=181
Score = 39.9 bits (91), Expect = 0.027, Method: Composition-based stats.
Identities = 19/68 (28%), Positives = 29/68 (43%), Gaps = 4/68 (6%)
Query 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
+G + RE + EK RR +M L+S V +RKL ++ A +M L+
Sbjct 9 EGNSSSLREQRNLREKDRRMRMKHLFSILSSHVSP----TRKLPVPHLIDQATSYMIQLK 64
Query 127 GATNPYTE 134
N E
Sbjct 65 ENVNYLKE 72
>sp|Q4W9W8|SRBB_ASPFU Transcription factor srbB OS=Aspergillus
fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 /
Af293) OX=330879 GN=srbB PE=2 SV=1
Length=299
Score = 40.7 bits (93), Expect = 0.028, Method: Composition-based stats.
Identities = 28/118 (24%), Positives = 42/118 (36%), Gaps = 15/118 (13%)
Query 55 DDPHGRLEYTEHQ---GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTC--------N 103
+ R T+ Q GR R AH+ IEKR R MN+ L +
Sbjct 183 SRKNSRSLSTDSQTATGRNAAKRAAHNIIEKRYRTNMNAKFVALEKAMSGSGVQKPTKGG 242
Query 104 AMSRKLDKLTVLRMAVQHMKTLRGATNPYTE--ANYKPTFLSDDELKHLILRAADGFL 159
+ L K +L A+ +M+ L+ + A K L +H + D F
Sbjct 243 SGPASLKKSEILTNAIAYMQELQDQNAALQKELALLKQNLLPGGLWRHN--KENDKFR 298
>sp|Q90ZL1|MSGN1_DANRE Mesogenin-1 OS=Danio rerio OX=7955 GN=msgn1
PE=2 SV=1
Length=131
Score = 38.7 bits (88), Expect = 0.029, Method: Composition-based stats.
Identities = 19/107 (18%), Positives = 36/107 (34%), Gaps = 8/107 (7%)
Query 34 DCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIK-------NAREAHSQIEKRRRD 86
++ +S + D EH + K R S+ EK R
Sbjct 25 SFGDSASSPESESFDSACSSPDARSSPTAGCEHAEQQKPKVKMSMRRRMKASEREKLRMR 84
Query 87 KMNSFIDELASLVPTCNAMSRK-LDKLTVLRMAVQHMKTLRGATNPY 132
+ + +L +P + + L K+ L+ +Q++K L G
Sbjct 85 SLAEALHQLRDYLPPGYSRRGQPLTKIQTLKYTIQYIKELSGILEQQ 131
>sp|P04198|MYCN_HUMAN N-myc proto-oncogene protein OS=Homo sapiens
OX=9606 GN=MYCN PE=1 SV=2
Length=464
Score = 41.0 bits (94), Expect = 0.029, Method: Composition-based stats.
Identities = 14/67 (21%), Positives = 30/67 (45%), Gaps = 1/67 (1%)
Query 66 HQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
R H+ +E++RR+ + S L VP + K K+ +L+ A +++ +L
Sbjct 375 SDSEDSERRRNHNILERQRRNDLRSSFLTLRDHVPEL-VKNEKAAKVVILKKATEYVHSL 433
Query 126 RGATNPY 132
+ +
Sbjct 434 QAEEHQL 440
>sp|Q9MZT6|MYC_SYLFL Myc proto-oncogene protein OS=Sylvilagus
floridanus OX=9988 GN=MYC PE=3 SV=1
Length=438
Score = 41.0 bits (94), Expect = 0.031, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
R TE + R H+ +E++RR+++ L +P + K K+ +L+ A
Sbjct 345 RSSDTEENDK----RRTHNVLERQRRNELKRSFFALRDQIPELEN-NEKAPKVVILKKAT 399
Query 120 QHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
++ ++ + ++LKH + +
Sbjct 400 AYILAVQAEEQKLV-SEKDLLRKRREQLKHKLEQ 432
>sp|Q9Y613|FHOD1_HUMAN FH1/FH2 domain-containing protein 1 OS=Homo
sapiens OX=9606 GN=FHOD1 PE=1 SV=3
Length=1164
Score = 41.4 bits (95), Expect = 0.031, Method: Composition-based stats.
Identities = 32/169 (19%), Positives = 59/169 (35%), Gaps = 12/169 (7%)
Query 360 ILAYLPQELLGTSCYEYFHQDDIGHL--AECHRQVLQTREKITTNCYKFKIKD-GSFITL 416
L Y PQ ++ H L C +VLQ ++K T Y+ + K G IT
Sbjct 960 YLGYTPQAAREVRIMQFCHTLREFALEYRTCRERVLQQQQKQAT--YRERNKTRGRMITE 1017
Query 417 RSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKR 476
++ V+ ++ + LT+ P S G +
Sbjct 1018 TEKFSGVAGEAPSNPSVPVAVSSGPGRGDADSHASMKSLLTSRPEDTTHNRRS-RGMVQS 1076
Query 477 THPTVPGIPGGTRAGA----GKIGRMIAEEIMEI--HRIRGSSPSSCGS 519
+ P +P + T + + ++EIM++ + SSP + +
Sbjct 1077 SSPIMPTVGPSTASPEEPPGSSLPSDTSDEIMDLLVQSVTKSSPRALAA 1125
>sp|Q9FLI1|BH036_ARATH Transcription factor bHLH36 OS=Arabidopsis
thaliana OX=3702 GN=BHLH36 PE=2 SV=1
Length=174
Score = 39.5 bits (90), Expect = 0.031, Method: Composition-based stats.
Identities = 24/93 (26%), Positives = 39/93 (42%), Gaps = 6/93 (6%)
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEAN 136
H + E++RR +M S L SL+P + + K + AV ++K L+ +
Sbjct 6 HRETERQRRQEMASLYASLRSLLPL-HFIKGKRSTSDQVNEAVNYIKYLQRKIKELSVRR 64
Query 137 YKPTFLSDDELKHLILRAADG-FLFVVGCDRGK 168
LS L L +++G F V GK
Sbjct 65 DDLMVLSRGSL----LGSSNGDFKEDVEMISGK 93
>sp|Q6Q2A8|MYOD1_TAKRU Myoblast determination protein 1 homolog
OS=Takifugu rubripes OX=31033 GN=myod PE=2 SV=1
Length=307
Score = 40.7 bits (93), Expect = 0.033, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 33/65 (51%), Gaps = 2/65 (3%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
R+A + E+RR K+N + L T +++L K+ +LR A+ ++++L+
Sbjct 110 RRKAATLRERRRLSKVNEAFETLKRCTNT--NPNQRLPKVEILRNAISYIESLQALLRGG 167
Query 133 TEANY 137
+ +
Sbjct 168 QDEAF 172
>sp|Q9W4S7|MYC_DROME Myc protein OS=Drosophila melanogaster OX=7227
GN=Myc PE=1 SV=2
Length=717
Score = 41.0 bits (94), Expect = 0.034, Method: Composition-based stats.
Identities = 26/119 (22%), Positives = 45/119 (38%), Gaps = 3/119 (3%)
Query 17 SPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREA 76
S G T +SS +D N +R+ S ++ L + E K R
Sbjct 572 SSGNTSPISSGQDVDAMDRNWQRRSGGIATSTSSNSSVHRKDFVLGFDEADTIEK--RNQ 629
Query 77 HSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA 135
H+ +E++RR + + + L +PT R K+ +LR A + L +
Sbjct 630 HNDMERQRRIGLKNLFEALKKQIPTIRDKERAP-KVNILREAAKLCIQLTQEEKELSMQ 687
>sp|P03966|MYCN_MOUSE N-myc proto-oncogene protein OS=Mus musculus
OX=10090 GN=Mycn PE=1 SV=2
Length=462
Score = 41.0 bits (94), Expect = 0.034, Method: Composition-based stats.
Identities = 14/67 (21%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query 66 HQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
R H+ +E++RR+ + S L VP + K K+ +L+ A +++ L
Sbjct 373 SDSEDSERRRNHNILERQRRNDLRSSFLTLRDHVPEL-VKNEKAAKVVILKKATEYVHAL 431
Query 126 RGATNPY 132
+ +
Sbjct 432 QANEHQL 438
>sp|Q6QHK4|FIGLA_HUMAN Factor in the germline alpha OS=Homo sapiens
OX=9606 GN=FIGLA PE=1 SV=2
Length=219
Score = 39.9 bits (91), Expect = 0.034, Method: Composition-based stats.
Identities = 22/97 (23%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
P G TE+ + R + E+ R +N L +LVP SRK K+ +L+
Sbjct 50 PSGGYSSTENLQLVLERRRVANAKERERIKNLNRGFARLKALVPFLPQ-SRKPSKVDILK 108
Query 117 MAVQHMK----TLRGATNPYTEANYKPTFLSDDELKH 149
A ++++ L GA + + + ++ ++ H
Sbjct 109 GATEYIQVLSDLLEGAKDSKKQDPDEQSYSNNSSESH 145
>sp|A8E5T6|TCF21_XENTR Transcription factor 21 OS=Xenopus tropicalis
OX=8364 GN=tcf21 PE=2 SV=1
Length=179
Score = 39.5 bits (90), Expect = 0.034, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 39/98 (40%), Gaps = 5/98 (5%)
Query 30 TSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMN 89
+S D +KG T + K P G + Q + R A + E+ R ++
Sbjct 41 SSTCDNGSPKKGRGTSGKRRKAPSKKSPLGNINQEGKQVQ----RNAANARERARMRVLS 96
Query 90 SFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
L + +P + KL KL LR+A ++ LR
Sbjct 97 KAFSRLKTTLPWVPPDT-KLSKLDTLRLASSYIAHLRQ 133
>sp|Q7X742|ILI1_ORYSJ Transcription factor ILI1 OS=Oryza sativa
subsp. japonica OX=39947 GN=BHLH154 PE=1 SV=2
Length=104
Score = 38.0 bits (86), Expect = 0.034, Method: Composition-based stats.
Identities = 8/51 (16%), Positives = 23/51 (45%), Gaps = 2/51 (4%)
Query 86 DKMNSFIDELASLVP--TCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTE 134
D++ + +L +L+P + + VL+ ++++L + +E
Sbjct 30 DQIAELLSKLQALLPESQARNGAHRGSAARVLQETCSYIRSLHQEVDNLSE 80
>sp|A2XY47|ILI1_ORYSI Transcription factor ILI1 OS=Oryza sativa
subsp. indica OX=39946 GN=ILI1 PE=3 SV=1
Length=104
Score = 38.0 bits (86), Expect = 0.034, Method: Composition-based stats.
Identities = 8/51 (16%), Positives = 23/51 (45%), Gaps = 2/51 (4%)
Query 86 DKMNSFIDELASLVP--TCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTE 134
D++ + +L +L+P + + VL+ ++++L + +E
Sbjct 30 DQIAELLSKLQALLPESQARNGAHRGSAARVLQETCSYIRSLHQEVDNLSE 80
>sp|Q63379|MYCN_RAT N-myc proto-oncogene protein OS=Rattus norvegicus
OX=10116 GN=Mycn PE=3 SV=1
Length=462
Score = 40.7 bits (93), Expect = 0.034, Method: Composition-based stats.
Identities = 14/67 (21%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query 66 HQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
R H+ +E++RR+ + S L VP + K K+ +L+ A +++ L
Sbjct 373 SDSEDSERRRNHNILERQRRNDLRSSFLTLRDHVPEL-VKNEKAAKVVILKKATEYVHAL 431
Query 126 RGATNPY 132
+ +
Sbjct 432 QANEHQL 438
>sp|Q9H2A3|NGN2_HUMAN Neurogenin-2 OS=Homo sapiens OX=9606 GN=NEUROG2
PE=1 SV=2
Length=272
Score = 40.3 bits (92), Expect = 0.034, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 38/120 (32%), Gaps = 1/120 (1%)
Query 45 DYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNA 104
D + + G Q K R + E+ R +N+ +D L ++PT
Sbjct 85 DCKRRPSRARAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPE 144
Query 105 MSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGC 164
+ KL K+ LR A ++ L L +L + G +
Sbjct 145 DA-KLTKIETLRFAHNYIWALTETLRLADHCGGGGGGLPGALFSEAVLLSPGGASAALSS 203
>sp|O09105|NDF4_MOUSE Neurogenic differentiation factor 4 OS=Mus
musculus OX=10090 GN=Neurod4 PE=1 SV=1
Length=330
Score = 40.7 bits (93), Expect = 0.037, Method: Composition-based stats.
Identities = 15/54 (28%), Positives = 29/54 (54%), Gaps = 1/54 (2%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
R + R + E+ R +N +D L ++P C + ++KL K+ LR+A ++
Sbjct 84 RFRARRVKANARERTRMHGLNDALDNLRRVMP-CYSKTQKLSKIETLRLARNYI 136
>sp|Q3UPL0|SC31A_MOUSE Protein transport protein Sec31A OS=Mus
musculus OX=10090 GN=Sec31a PE=1 SV=2
Length=1230
Score = 41.0 bits (94), Expect = 0.038, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 33/116 (28%), Gaps = 12/116 (10%)
Query 467 LPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIM-EIHRIRGSSPSSCGS---SPL 522
PS + P P G G A + R S S P
Sbjct 943 PPSSGASFQHGGPGAPPSSSAYALPPGTTGTPPAASELPASQRTENQSFQDQASILEGPQ 1002
Query 523 NITSTPPPDASSPGGKKILNGGTPDIP-------SSGLLSGQA-QENPGYPYSDSS 570
N + PP P KK+ P +P SG Q Q+ P P SS
Sbjct 1003 NGWNDPPALNRVPKKKKMPENFMPPVPITSPIMNPSGDPQSQGLQQQPSTPGPLSS 1058
>sp|Q6XD76|ASCL4_HUMAN Achaete-scute homolog 4 OS=Homo sapiens
OX=9606 GN=ASCL4 PE=1 SV=1
Length=172
Score = 39.1 bits (89), Expect = 0.039, Method: Composition-based stats.
Identities = 13/57 (23%), Positives = 25/57 (44%), Gaps = 1/57 (2%)
Query 76 AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
++ E++R +N L +P A +L K+ LR A+ ++K L+
Sbjct 76 KRNERERQRVRCVNEGYARLRDHLPRELADK-RLSKVETLRAAIDYIKHLQELLERQ 131
>sp|Q0VFI9|MAD1_XENTR Max dimerization protein 1 OS=Xenopus tropicalis
OX=8364 GN=mxd1 PE=2 SV=1
Length=221
Score = 39.9 bits (91), Expect = 0.040, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 1/99 (1%)
Query 37 RKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELA 96
+R+ + SM L+ + N+R H+++EK RR + +++L
Sbjct 20 ERREREAEHGYASMLPYNSKERDGLKRKSKSKKSSNSRSTHNEMEKNRRAHLRLCLEKLK 79
Query 97 SLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA 135
LVP +R L++L A H+K L
Sbjct 80 ILVPLGPESNRHT-TLSLLTRAKSHIKKLEDCDKRSLHQ 117
>sp|Q8GW32|PRE6_ARATH Transcription factor PRE6 OS=Arabidopsis
thaliana OX=3702 GN=PRE6 PE=1 SV=1
Length=94
Score = 37.6 bits (85), Expect = 0.040, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 27/61 (44%), Gaps = 1/61 (2%)
Query 86 DKMNSFIDELASLVP-TCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSD 144
D+++ + +L L+P S K+ VL+ +++ L + ++ + +D
Sbjct 20 DQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRNLHREVDDLSDRLSELLASTD 79
Query 145 D 145
D
Sbjct 80 D 80
>sp|Q96RJ6|FER3L_HUMAN Fer3-like protein OS=Homo sapiens OX=9606
GN=FERD3L PE=1 SV=1
Length=166
Score = 39.1 bits (89), Expect = 0.041, Method: Composition-based stats.
Identities = 15/66 (23%), Positives = 31/66 (47%), Gaps = 1/66 (2%)
Query 72 NAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNP 131
R+A + E++R +N D+L VPT A ++L ++ LR+A+ ++ +
Sbjct 101 AQRQAANIRERKRMFNLNEAFDQLRRKVPT-FAYEKRLSRIETLRLAIVYISFMTELLES 159
Query 132 YTEANY 137
+
Sbjct 160 CEKKES 165
>sp|Q9LT23|BH121_ARATH Transcription factor bHLH121 OS=Arabidopsis
thaliana OX=3702 GN=BHLH121 PE=1 SV=1
Length=337
Score = 40.3 bits (92), Expect = 0.041, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 3/79 (4%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
L E + + + EK RR+K+N EL +++ + K DK T+L
Sbjct 43 SPSILPAEEEVMDVSARKSQKAGREKLRREKLNEHFVELGNVL---DPERPKNDKATILT 99
Query 117 MAVQHMKTLRGATNPYTEA 135
VQ +K L N
Sbjct 100 DTVQLLKELTSEVNKLKSE 118
>sp|P10627|TWIST_DROME Protein twist OS=Drosophila melanogaster
OX=7227 GN=twi PE=1 SV=2
Length=490
Score = 40.7 bits (93), Expect = 0.043, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
TE N R + E++R +N L ++PT S KL K+ L++A +++
Sbjct 354 TEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPT--LPSDKLSKIQTLKLATRYI 410
>sp|Q8I1G0|TWIST_DROER Protein twist OS=Drosophila erecta OX=7220
GN=twi PE=3 SV=1
Length=490
Score = 40.7 bits (93), Expect = 0.043, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
TE N R + E++R +N L ++PT S KL K+ L++A +++
Sbjct 354 TEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPT--LPSDKLSKIQTLKLATRYI 410
>sp|P13096|ESM5_DROME Enhancer of split m5 protein OS=Drosophila
melanogaster OX=7227 GN=E(spl)m5-HLH PE=1 SV=1
Length=178
Score = 39.1 bits (89), Expect = 0.046, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 42/103 (41%), Gaps = 8/103 (8%)
Query 81 EKRRRDKMNSFIDELASLVP--TCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYK 138
E++RR +MN +D L +LV + ++DK +L A+ M+ +A
Sbjct 27 ERQRRARMNKCLDTLKTLVAEFQGDDAILRMDKAEMLEAALVFMRK----QVVKQQAPVS 82
Query 139 PTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILN 181
P + K+ + A V+ C + V ++V L
Sbjct 83 PLPMDS--FKNGYMNAVSEISRVMACTPAMSVDVGKTVMTHLG 123
>sp|Q9NP71|MLXPL_HUMAN Carbohydrate-responsive element-binding
protein OS=Homo sapiens OX=9606 GN=MLXIPL PE=1 SV=1
Length=852
Score = 40.7 bits (93), Expect = 0.046, Method: Composition-based stats.
Identities = 18/73 (25%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSR-KLDKLTVLRMAVQHMKTL 125
+ +N R H E++RR + D L LV T +A K+ K T L+ +++ L
Sbjct 644 SNKTENRRITHISAEQKRRFNIKLGFDTLHGLVSTLSAQPSLKVSKATTLQKTAEYILML 703
Query 126 RGATNPYTEANYK 138
+ E +
Sbjct 704 QQERAGLQEEAQQ 716
>sp|Q8NFJ8|BHE22_HUMAN Class E basic helix-loop-helix protein
22 OS=Homo sapiens OX=9606 GN=BHLHE22 PE=1 SV=1
Length=381
Score = 40.3 bits (92), Expect = 0.052, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMS-RKLDKLTVLRMAVQHMK 123
+ K R + E+RR +N +DEL +++P ++ S RKL K+ L +A ++
Sbjct 235 KKSKEQKALRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYIL 294
Query 124 TLRGATNPY 132
A
Sbjct 295 MQAQALEEM 303
>sp|Q9M8K6|MUTE_ARATH Transcription factor MUTE OS=Arabidopsis
thaliana OX=3702 GN=MUTE PE=2 SV=1
Length=202
Score = 39.1 bits (89), Expect = 0.053, Method: Composition-based stats.
Identities = 13/55 (24%), Positives = 28/55 (51%), Gaps = 2/55 (4%)
Query 76 AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
+H +E+ RR +MN + L SL P ++ D+ +++ ++ +K L+
Sbjct 2 SHIAVERNRRRQMNEHLKSLRSLTPC--FYIKRGDQASIIGGVIEFIKELQQLVQ 54
>sp|O42202|NDF1_DANRE Neurogenic differentiation factor 1 OS=Danio
rerio OX=7955 GN=neurod1 PE=1 SV=1
Length=350
Score = 39.9 bits (91), Expect = 0.054, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 29/61 (48%), Gaps = 1/61 (2%)
Query 62 EYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQH 121
R K R + E+ R +N ++ L +VP C + ++KL K+ LR+A +
Sbjct 86 MTKARMQRFKMRRMKANARERNRMHGLNDALESLRKVVP-CYSKTQKLSKIETLRLAKNY 144
Query 122 M 122
+
Sbjct 145 I 145
>sp|P24793|MYCN_XENLA N-myc protein OS=Xenopus laevis OX=8355
GN=mycn PE=2 SV=1
Length=437
Score = 40.3 bits (92), Expect = 0.056, Method: Composition-based stats.
Identities = 14/62 (23%), Positives = 29/62 (47%), Gaps = 1/62 (2%)
Query 66 HQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
+ R H+ +E++RR+ + S L VP + K K+ +L+ A +++ +L
Sbjct 348 YDSEDSERRRNHNILERQRRNDLRSSFLTLRDHVPEL-IKNEKAAKVVILKKATEYVHSL 406
Query 126 RG 127
Sbjct 407 HA 408
>sp|Q10007|HLH6_CAEEL Helix-loop-helix protein 6 OS=Caenorhabditis
elegans OX=6239 GN=hlh-6 PE=2 SV=1
Length=268
Score = 39.5 bits (90), Expect = 0.057, Method: Composition-based stats.
Identities = 15/90 (17%), Positives = 35/90 (39%), Gaps = 1/90 (1%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
+E + G ++ ++ E+ R +N + L +P + +++ K+ LR+A+
Sbjct 161 PVELEDQYGPYSSSVWKRNERERCRVRNVNDGYERLRKHLP-VHFDEKRISKVDTLRLAI 219
Query 120 QHMKTLRGATNPYTEANYKPTFLSDDELKH 149
+++K L F E
Sbjct 220 RYIKHLDNLLRSELHQYNCKCFNGFQEESE 249
>sp|Q5JUK2|SOLH1_HUMAN Spermatogenesis- and oogenesis-specific
basic helix-loop-helix-containing protein 1 OS=Homo sapiens
OX=9606 GN=SOHLH1 PE=1 SV=4
Length=328
Score = 39.9 bits (91), Expect = 0.058, Method: Composition-based stats.
Identities = 19/101 (19%), Positives = 38/101 (38%), Gaps = 7/101 (7%)
Query 35 CNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDE 94
CN G+ + + D G + + + E+ RR +M+ +
Sbjct 21 CNGSLSGALSCCE-----DSARGSGPPKAPTVAEGPSSCLRRNVISERERRKRMSLSCER 75
Query 95 LASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA 135
L +L+P + R+ D +VL M+VQ ++ +
Sbjct 76 LRALLPQFDG--RREDMASVLEMSVQFLRLASALGPSQEQH 114
>sp|P20824|NUC1_NEUCR Phosphorus acquisition-controlling protein
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS
708.71 / DSM 1257 / FGSC 987) OX=367110 GN=nuc-1 PE=3 SV=2
Length=801
Score = 40.3 bits (92), Expect = 0.061, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 5/94 (5%)
Query 8 ISSTISDFMSPGPTDL-LSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEH 66
+S + +SP L S G +T + + G +E
Sbjct 584 MSPALRPKISPSIKPLLPGGSAGAEDA----ASILLATKSNYQRILEGNTVPGVSYPSEL 639
Query 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVP 100
+ + R +H E+ RR+++NS + E+A+L+P
Sbjct 640 STNLTSKRTSHKIAEQGRRNRINSALQEIATLLP 673
>sp|Q8LPD9|PHOT_CHLRE Phototropin OS=Chlamydomonas reinhardtii
OX=3055 GN=PHOT PE=1 SV=1
Length=749
Score = 40.3 bits (92), Expect = 0.063, Method: Composition-based stats.
Identities = 30/219 (14%), Positives = 68/219 (31%), Gaps = 16/219 (7%)
Query 169 ILFVSESVFKILNYSQNDLIGQSLF----DYLHPKDIAKVKEQLSSSDTAPRERLIDAKT 224
+++ SE + + Y ++++G + + PK++ K+++ + + L K
Sbjct 34 LVYASEGFYAMTGYGPDEVLGHNCRFLQGEGTDPKEVQKIRDAIKKGEACSVRLLNYRKD 93
Query 225 GLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHS 284
G P +T P + G F ++ + S ++ +
Sbjct 94 GTPFWNLLTVTPIKTPDGRVSKFVG-VQVDVTSKTEGKALADNSGVPLLVKYDHRLRDNV 152
Query 285 TGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRH 344
+ + E EP + ++ +G + + V R
Sbjct 153 ARTIVDDVTIAVEKAEGVEP-GQASAVAAAAPLGAKGPRGTAPKSFPRVALDLATTVERI 211
Query 345 A----------IDGKFVFVDQRATAILAYLPQELLGTSC 373
D VF + Y +E+LG +C
Sbjct 212 QQNFCISDPTLPDCPIVFASDAFLELTGYSREEVLGRNC 250
>sp|P52160|MYCA_DANRE Transcriptional regulator Myc-A OS=Danio
rerio OX=7955 GN=myca PE=2 SV=3
Length=419
Score = 39.9 bits (91), Expect = 0.066, Method: Composition-based stats.
Identities = 12/68 (18%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ R H+ +E++RR+++ L +P A + K K+ +L+ A + + +
Sbjct 328 TSDSEDNDKRRTHNVLERQRRNELKLSFFALRDEIPEV-ANNEKAAKVVILKKATECIHS 386
Query 125 LRGATNPY 132
++
Sbjct 387 MQLDEQRL 394
>sp|F4JCN9|PRE4_ARATH Transcription factor PRE4 OS=Arabidopsis
thaliana OX=3702 GN=PRE4 PE=1 SV=1
Length=92
Score = 36.8 bits (83), Expect = 0.066, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 2/72 (3%)
Query 86 DKMNSFIDELASLVP--TCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLS 143
+++N + +L L+P N S K+ VL+ +++ L + +E + +
Sbjct 19 EQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRNLSKEVDDLSERLSQLLEST 78
Query 144 DDELKHLILRAA 155
D LI
Sbjct 79 DSAQAALIRSLL 90
>sp|Q18034|NFX1_CAEEL Transcriptional repressor NF-X1 homolog
OS=Caenorhabditis elegans OX=6239 GN=nfx-1 PE=3 SV=1
Length=1119
Score = 40.3 bits (92), Expect = 0.069, Method: Composition-based stats.
Identities = 37/252 (15%), Positives = 74/252 (29%), Gaps = 29/252 (12%)
Query 48 ESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRD-KMNSFIDEL------ASLVP 100
+S+ D P + + H + +E +RRR + N+ +L P
Sbjct 99 QSVLFDPSVPPPTIGASTHSNQNSRQQEPSQN--RRRRGGQQNTQRRQLEIQEQRGDSHP 156
Query 101 TCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLF 160
+ ++L V R+A Q K+++ + + ++ + + L
Sbjct 157 QNQSRQNNRNQLNVDRIANQQNKSVQNPSRNPGNSRRGQGARRREQKEEPLTEEETKILA 216
Query 161 VVGCDRGKILFVSESVFKI-LNYS-----QNDLIGQSLFDYLHPKDIAKVKEQLSSSDTA 214
G + + + ++ + Y+ Q ++ + H +S+
Sbjct 217 DKPLREGLVYLLENNKYECAICYTRITTRQGVWSCKTCYHIFH----------ISTGCIT 266
Query 215 PRERLIDAKTGLPVKTDIT-PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKK 273
R K G T + F RM+ V TC
Sbjct 267 DWARSSRDKEGANTWRCPTCQTENETMPYNYYCFCGRMRNPNFRVGEVPHSCGETCGG-- 324
Query 274 ADRKSFCTIHST 285
RK C T
Sbjct 325 -ARKFGCPHPCT 335
>sp|Q6YUX0|ILI5_ORYSJ Transcription factor ILI5 OS=Oryza sativa
subsp. japonica OX=39947 GN=ILI5 PE=1 SV=1
Length=88
Score = 36.8 bits (83), Expect = 0.070, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 25/60 (42%), Gaps = 1/60 (2%)
Query 86 DKMNSFIDELASLVPTC-NAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSD 144
+++N I +L SL+P S + +L+ ++K+L + ++ D
Sbjct 14 EEINELISKLQSLLPNSRRRGSSQASTTKLLKETCNYIKSLHREVDDLSDRLSDLMATMD 73
>sp|A2X9L8|ILI5_ORYSI Transcription factor ILI5 OS=Oryza sativa
subsp. indica OX=39946 GN=ILI5 PE=3 SV=1
Length=88
Score = 36.8 bits (83), Expect = 0.070, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 25/60 (42%), Gaps = 1/60 (2%)
Query 86 DKMNSFIDELASLVPTC-NAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSD 144
+++N I +L SL+P S + +L+ ++K+L + ++ D
Sbjct 14 EEINELISKLQSLLPNSRRRGSSQASTTKLLKETCNYIKSLHREVDDLSDRLSDLMATMD 73
>sp|Q13562|NDF1_HUMAN Neurogenic differentiation factor 1 OS=Homo
sapiens OX=9606 GN=NEUROD1 PE=1 SV=3
Length=356
Score = 39.5 bits (90), Expect = 0.071, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 30/54 (56%), Gaps = 1/54 (2%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
R K R + E+ R +N+ +D L +VP C + ++KL K+ LR+A ++
Sbjct 98 RFKLRRMKANARERNRMHGLNAALDNLRKVVP-CYSKTQKLSKIETLRLAKNYI 150
>sp|Q90342|MYC2_CYPCA Transcriptional regulator Myc-2 OS=Cyprinus
carpio OX=7962 GN=mycb PE=3 SV=1
Length=401
Score = 39.9 bits (91), Expect = 0.072, Method: Composition-based stats.
Identities = 12/68 (18%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ R H+ +E++RR+++ L +P A + K K+ +L+ A + + +
Sbjct 310 TSDSEDNDKRRTHNVLERQRRNELKLSFFALRDEIPEV-ANNEKAAKVVILKKATECIHS 368
Query 125 LRGATNPY 132
++
Sbjct 369 MQLDEQRL 376
>sp|Q8GT73|BH119_ARATH Transcription factor bHLH119 OS=Arabidopsis
thaliana OX=3702 GN=BHLH119 PE=2 SV=2
Length=544
Score = 39.9 bits (91), Expect = 0.073, Method: Composition-based stats.
Identities = 23/97 (24%), Positives = 49/97 (51%), Gaps = 4/97 (4%)
Query 30 TSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMN 89
T V +R+ T+ ++ +T + + + A + H+ E+RRR+++N
Sbjct 315 TERVQIQPERETKITEDKKREETIAEIQGTEEAHGSTSRKRSRAADMHNLSERRRRERIN 374
Query 90 SFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
+ L L+P C RK DK+++L ++++K+L+
Sbjct 375 ERMKTLQELLPRC----RKTDKVSMLEDVIEYVKSLQ 407
>sp|Q20561|HLH13_CAEEL Helix-loop-helix protein 13 OS=Caenorhabditis
elegans OX=6239 GN=hlh-13 PE=2 SV=1
Length=147
Score = 38.0 bits (86), Expect = 0.073, Method: Composition-based stats.
Identities = 14/54 (26%), Positives = 27/54 (50%), Gaps = 1/54 (2%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
R+ S E++R +N EL + +PT ++L K+ L +A+ ++ L
Sbjct 43 RQTASIRERKRMCSINVAFIELRNYIPT-FPYEKRLSKIDTLNLAIAYINMLDD 95
>sp|Q60867|NDF1_MOUSE Neurogenic differentiation factor 1 OS=Mus
musculus OX=10090 GN=Neurod1 PE=1 SV=2
Length=357
Score = 39.5 bits (90), Expect = 0.075, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 30/54 (56%), Gaps = 1/54 (2%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
R K R + E+ R +N+ +D L +VP C + ++KL K+ LR+A ++
Sbjct 98 RFKLRRMKANARERNRMHGLNAALDNLRKVVP-CYSKTQKLSKIETLRLAKNYI 150
>sp|P50541|MXI1_DANRE Max-interacting protein 1 OS=Danio rerio
OX=7955 GN=mxi1 PE=2 SV=1
Length=243
Score = 39.1 bits (89), Expect = 0.076, Method: Composition-based stats.
Identities = 18/73 (25%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
+ ++ + + R H+++EK RR + ++ L +L+P SR L +L A
Sbjct 64 QRKFRNKKCNNNHYRSTHNELEKNRRAHLRLCLERLKTLIPLGPECSRHT-TLGLLNKAK 122
Query 120 QHMKTLRGATNPY 132
H+K L A
Sbjct 123 AHIKKLEEADRKS 135
>sp|Q8FW73|LOVHK_BRUSU Blue-light-activated histidine kinase OS=Brucella
suis biovar 1 (strain 1330) OX=204722 GN=BRA0588
PE=3 SV=2
Length=489
Score = 39.9 bits (91), Expect = 0.079, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 43/131 (33%), Gaps = 5/131 (4%)
Query 310 NLSCLVAIGR--LHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
+L + GR L P E + M + H D VF + + Y E
Sbjct 4 DLRPFIPFGRGALSQATDPFRAAVEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADE 63
Query 368 LLGTSC-YEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNP 426
++G +C + H D H+ + + I + +K K G R N
Sbjct 64 VMGRNCRFLQGHGTDPAHVRAIKSAIAAEK-PIDIDIINYK-KSGEAFWNRLHISPVHNA 121
Query 427 WTKEVEYIVST 437
+ ++ S
Sbjct 122 NGRLQHFVSSQ 132
Score = 38.7 bits (88), Expect = 0.17, Method: Composition-based stats.
Identities = 14/90 (16%), Positives = 30/90 (33%), Gaps = 6/90 (7%)
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLG-TSCYEYFHQDDIGHLAECHRQVLQTREK 398
+ +R GK I + P E + + + +D + + Q + +
Sbjct 174 FWTREFYSGKMT-CSAECRRIYGFTPDEPVHFDTILDLVVLEDRMTVVQKAHQAVT--GE 230
Query 399 ITTNCYKFKIKDGSFITLRSRWFSFM--NP 426
+ Y+ + G L +R + NP
Sbjct 231 PYSIEYRIVTRLGETRWLETRAKALTGENP 260
>sp|A9WYQ7|LOVHK_BRUSI Blue-light-activated histidine kinase OS=Brucella
suis (strain ATCC 23445 / NCTC 10510) OX=470137 GN=BSUIS_B0585
PE=3 SV=2
Length=489
Score = 39.9 bits (91), Expect = 0.079, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 43/131 (33%), Gaps = 5/131 (4%)
Query 310 NLSCLVAIGR--LHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
+L + GR L P E + M + H D VF + + Y E
Sbjct 4 DLRPFIPFGRGALSQATDPFRAAVEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADE 63
Query 368 LLGTSC-YEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNP 426
++G +C + H D H+ + + I + +K K G R N
Sbjct 64 VMGRNCRFLQGHGTDPAHVRAIKSAIAAEK-PIDIDIINYK-KSGEAFWNRLHISPVHNA 121
Query 427 WTKEVEYIVST 437
+ ++ S
Sbjct 122 NGRLQHFVSSQ 132
Score = 38.7 bits (88), Expect = 0.17, Method: Composition-based stats.
Identities = 14/90 (16%), Positives = 30/90 (33%), Gaps = 6/90 (7%)
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLG-TSCYEYFHQDDIGHLAECHRQVLQTREK 398
+ +R GK I + P E + + + +D + + Q + +
Sbjct 174 FWTREFYSGKMT-CSAECRRIYGFTPDEPVHFDTILDLVVLEDRMTVVQKAHQAVT--GE 230
Query 399 ITTNCYKFKIKDGSFITLRSRWFSFM--NP 426
+ Y+ + G L +R + NP
Sbjct 231 PYSIEYRIVTRLGETRWLETRAKALTGENP 260
>sp|Q8YC53|LOVHK_BRUME Blue-light-activated histidine kinase OS=Brucella
melitensis biotype 1 (strain ATCC 23456 / CCUG 17765
/ NCTC 10094 / 16M) OX=224914 GN=BMEII0679 PE=1 SV=1
Length=489
Score = 39.9 bits (91), Expect = 0.079, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 43/131 (33%), Gaps = 5/131 (4%)
Query 310 NLSCLVAIGR--LHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
+L + GR L P E + M + H D VF + + Y E
Sbjct 4 DLRPFIPFGRGALSQATDPFRAAVEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADE 63
Query 368 LLGTSC-YEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNP 426
++G +C + H D H+ + + I + +K K G R N
Sbjct 64 VMGRNCRFLQGHGTDPAHVRAIKSAIAAEK-PIDIDIINYK-KSGEAFWNRLHISPVHNA 121
Query 427 WTKEVEYIVST 437
+ ++ S
Sbjct 122 NGRLQHFVSSQ 132
Score = 38.7 bits (88), Expect = 0.17, Method: Composition-based stats.
Identities = 14/90 (16%), Positives = 30/90 (33%), Gaps = 6/90 (7%)
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLG-TSCYEYFHQDDIGHLAECHRQVLQTREK 398
+ +R GK I + P E + + + +D + + Q + +
Sbjct 174 FWTREFYSGKMT-CSAECRRIYGFTPDEPVHFDTILDLVVLEDRMTVVQKAHQAVT--GE 230
Query 399 ITTNCYKFKIKDGSFITLRSRWFSFM--NP 426
+ Y+ + G L +R + NP
Sbjct 231 PYSIEYRIVTRLGETRWLETRAKALTGENP 260
>sp|A9MBM8|LOVHK_BRUC2 Blue-light-activated histidine kinase OS=Brucella
canis (strain ATCC 23365 / NCTC 10854 / RM-666) OX=483179
GN=BCAN_B0589 PE=3 SV=2
Length=489
Score = 39.9 bits (91), Expect = 0.079, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 43/131 (33%), Gaps = 5/131 (4%)
Query 310 NLSCLVAIGR--LHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
+L + GR L P E + M + H D VF + + Y E
Sbjct 4 DLRPFIPFGRGALSQATDPFRAAVEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADE 63
Query 368 LLGTSC-YEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNP 426
++G +C + H D H+ + + I + +K K G R N
Sbjct 64 VMGRNCRFLQGHGTDPAHVRAIKSAIAAEK-PIDIDIINYK-KSGEAFWNRLHISPVHNA 121
Query 427 WTKEVEYIVST 437
+ ++ S
Sbjct 122 NGRLQHFVSSQ 132
Score = 38.7 bits (88), Expect = 0.17, Method: Composition-based stats.
Identities = 14/90 (16%), Positives = 30/90 (33%), Gaps = 6/90 (7%)
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLG-TSCYEYFHQDDIGHLAECHRQVLQTREK 398
+ +R GK I + P E + + + +D + + Q + +
Sbjct 174 FWTREFYSGKMT-CSAECRRIYGFTPDEPVHFDTILDLVVLEDRMTVVQKAHQAVT--GE 230
Query 399 ITTNCYKFKIKDGSFITLRSRWFSFM--NP 426
+ Y+ + G L +R + NP
Sbjct 231 PYSIEYRIVTRLGETRWLETRAKALTGENP 260
>sp|Q577Y7|LOVHK_BRUAB Blue-light-activated histidine kinase OS=Brucella
abortus biovar 1 (strain 9-941) OX=262698 GN=BruAb2_0636
PE=3 SV=2
Length=489
Score = 39.9 bits (91), Expect = 0.079, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 43/131 (33%), Gaps = 5/131 (4%)
Query 310 NLSCLVAIGR--LHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
+L + GR L P E + M + H D VF + + Y E
Sbjct 4 DLRPFIPFGRGALSQATDPFRAAVEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADE 63
Query 368 LLGTSC-YEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNP 426
++G +C + H D H+ + + I + +K K G R N
Sbjct 64 VMGRNCRFLQGHGTDPAHVRAIKSAIAAEK-PIDIDIINYK-KSGEAFWNRLHISPVHNA 121
Query 427 WTKEVEYIVST 437
+ ++ S
Sbjct 122 NGRLQHFVSSQ 132
Score = 38.7 bits (88), Expect = 0.17, Method: Composition-based stats.
Identities = 14/90 (16%), Positives = 30/90 (33%), Gaps = 6/90 (7%)
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLG-TSCYEYFHQDDIGHLAECHRQVLQTREK 398
+ +R GK I + P E + + + +D + + Q + +
Sbjct 174 FWTREFYSGKMT-CSAECRRIYGFTPDEPVHFDTILDLVVLEDRMTVVQKAHQAVT--GE 230
Query 399 ITTNCYKFKIKDGSFITLRSRWFSFM--NP 426
+ Y+ + G L +R + NP
Sbjct 231 PYSIEYRIVTRLGETRWLETRAKALTGENP 260
>sp|Q2YKK7|LOVHK_BRUA2 Blue-light-activated histidine kinase OS=Brucella
abortus (strain 2308) OX=359391 GN=BAB2_0652 PE=1
SV=2
Length=489
Score = 39.9 bits (91), Expect = 0.079, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 43/131 (33%), Gaps = 5/131 (4%)
Query 310 NLSCLVAIGR--LHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
+L + GR L P E + M + H D VF + + Y E
Sbjct 4 DLRPFIPFGRGALSQATDPFRAAVEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADE 63
Query 368 LLGTSC-YEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNP 426
++G +C + H D H+ + + I + +K K G R N
Sbjct 64 VMGRNCRFLQGHGTDPAHVRAIKSAIAAEK-PIDIDIINYK-KSGEAFWNRLHISPVHNA 121
Query 427 WTKEVEYIVST 437
+ ++ S
Sbjct 122 NGRLQHFVSSQ 132
Score = 38.7 bits (88), Expect = 0.17, Method: Composition-based stats.
Identities = 14/90 (16%), Positives = 30/90 (33%), Gaps = 6/90 (7%)
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLG-TSCYEYFHQDDIGHLAECHRQVLQTREK 398
+ +R GK I + P E + + + +D + + Q + +
Sbjct 174 FWTREFYSGKMT-CSAECRRIYGFTPDEPVHFDTILDLVVLEDRMTVVQKAHQAVT--GE 230
Query 399 ITTNCYKFKIKDGSFITLRSRWFSFM--NP 426
+ Y+ + G L +R + NP
Sbjct 231 PYSIEYRIVTRLGETRWLETRAKALTGENP 260
>sp|B2SB67|LOVHK_BRUA1 Blue-light-activated histidine kinase OS=Brucella
abortus (strain S19) OX=430066 GN=BAbS19_II06090
PE=3 SV=1
Length=489
Score = 39.9 bits (91), Expect = 0.079, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 43/131 (33%), Gaps = 5/131 (4%)
Query 310 NLSCLVAIGR--LHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
+L + GR L P E + M + H D VF + + Y E
Sbjct 4 DLRPFIPFGRGALSQATDPFRAAVEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADE 63
Query 368 LLGTSC-YEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNP 426
++G +C + H D H+ + + I + +K K G R N
Sbjct 64 VMGRNCRFLQGHGTDPAHVRAIKSAIAAEK-PIDIDIINYK-KSGEAFWNRLHISPVHNA 121
Query 427 WTKEVEYIVST 437
+ ++ S
Sbjct 122 NGRLQHFVSSQ 132
Score = 38.7 bits (88), Expect = 0.17, Method: Composition-based stats.
Identities = 14/90 (16%), Positives = 30/90 (33%), Gaps = 6/90 (7%)
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLG-TSCYEYFHQDDIGHLAECHRQVLQTREK 398
+ +R GK I + P E + + + +D + + Q + +
Sbjct 174 FWTREFYSGKMT-CSAECRRIYGFTPDEPVHFDTILDLVVLEDRMTVVQKAHQAVT--GE 230
Query 399 ITTNCYKFKIKDGSFITLRSRWFSFM--NP 426
+ Y+ + G L +R + NP
Sbjct 231 PYSIEYRIVTRLGETRWLETRAKALTGENP 260
>sp|Q64289|NDF1_RAT Neurogenic differentiation factor 1 OS=Rattus
norvegicus OX=10116 GN=Neurod1 PE=1 SV=1
Length=357
Score = 39.5 bits (90), Expect = 0.079, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 30/54 (56%), Gaps = 1/54 (2%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
R K R + E+ R +N+ +D L +VP C + ++KL K+ LR+A ++
Sbjct 98 RFKLRRMKANARERNRMHGLNAALDNLRKVVP-CYSKTQKLSKIETLRLAKNYI 150
>sp|Q0VH34|MAD1_XENLA Max dimerization protein 1 OS=Xenopus laevis
OX=8355 GN=mxd1 PE=2 SV=1
Length=221
Score = 38.7 bits (88), Expect = 0.080, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 1/99 (1%)
Query 37 RKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELA 96
+R+ + SM L+ + ++R H+++EK RR + +++L
Sbjct 20 ERREREAEHGYASMLPYNSKERDGLKRKSKSKKSSSSRSTHNEMEKNRRAHLRLCLEKLK 79
Query 97 SLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA 135
LVP +R L++L A H+K L
Sbjct 80 MLVPLGPESNRHT-TLSLLMRAKLHIKKLEDCDKRSVHQ 117
>sp|P15171|MYCB_XENLA Transcriptional regulator Myc-B OS=Xenopus
laevis OX=8355 GN=myc-b PE=2 SV=1
Length=420
Score = 39.5 bits (90), Expect = 0.085, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 50/130 (38%), Gaps = 6/130 (5%)
Query 24 LSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKR 83
S S V R + S+ + + ++ R +E + R H+ +E++
Sbjct 292 ASPSTKVDYVSSKRAKLESNVRVLKQISNNRKCASPRSSDSEENDK----RRTHNVLERQ 347
Query 84 RRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLS 143
RR+++ L VP + K K+ +L+ A ++ +++ +
Sbjct 348 RRNELKLSFFALRDQVPRWRN-NEKAPKVVILKKATEYAISMQEDERRLIRET-EQLKYR 405
Query 144 DDELKHLILR 153
++LK + +
Sbjct 406 KEQLKQRLQQ 415
>sp|Q9XIJ1|BH168_ARATH Transcription factor bHLH168 OS=Arabidopsis
thaliana OX=3702 GN=BHLH168 PE=3 SV=1
Length=174
Score = 38.3 bits (87), Expect = 0.085, Method: Composition-based stats.
Identities = 26/147 (18%), Positives = 56/147 (38%), Gaps = 20/147 (14%)
Query 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASL------VPTCNAMSRKLDKLTVLRMAVQ 120
+G + RE + EK RR +M L+S +P + + + + L+ V
Sbjct 9 EGSASSLREQRNLREKERRMRMKHLFSILSSHVSPTRRLPVPQLIDQAVSYMIQLKEKVN 68
Query 121 HM-----KTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILF--VS 173
++ + L G +E + LS L +I + + G +L VS
Sbjct 69 YLNEMKRRMLGGEVKNRSEGSSLLPKLSIRSLDSIIEMNL---VMDLNMK-GVMLHKLVS 124
Query 174 ---ESVFKILNYSQNDLIGQSLFDYLH 197
E ++++ + +L ++ + +
Sbjct 125 VFEEEGAQVMSANLQNLNDRTFYTIIA 151
>sp|Q9QX98|PTF1A_MOUSE Pancreas transcription factor 1 subunit
alpha OS=Mus musculus OX=10090 GN=Ptf1a PE=1 SV=1
Length=324
Score = 39.1 bits (89), Expect = 0.085, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 31/59 (53%), Gaps = 1/59 (2%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
+ ++ R+A + E+RR +N + L S +PT ++L K+ LR+A+ ++
Sbjct 152 VRSEAELQQLRQAANVRERRRMQSINDAFEGLRSHIPTL-PYEKRLSKVDTLRLAIGYI 209
>sp|Q64305|PTF1A_RAT Pancreas transcription factor 1 subunit alpha
OS=Rattus norvegicus OX=10116 GN=Ptf1a PE=1 SV=1
Length=326
Score = 39.1 bits (89), Expect = 0.086, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 31/59 (53%), Gaps = 1/59 (2%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
+ ++ R+A + E+RR +N + L S +PT ++L K+ LR+A+ ++
Sbjct 154 VRSEAELQQLRQAANVRERRRMQSINDAFEGLRSHIPTL-PYEKRLSKVDTLRLAIGYI 211
>sp|P41134|ID1_HUMAN DNA-binding protein inhibitor ID-1 OS=Homo
sapiens OX=9606 GN=ID1 PE=1 SV=3
Length=155
Score = 38.0 bits (86), Expect = 0.090, Method: Composition-based stats.
Identities = 14/47 (30%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query 88 MNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTE 134
MN L LVPT +RK+ K+ +L+ + +++ L+ N +E
Sbjct 69 MNGCYSRLKELVPTLPQ-NRKVSKVEILQHVIDYIRDLQLELNSESE 114
>sp|P41846|WBS14_CAEEL Protein WBSCR14 homolog OS=Caenorhabditis
elegans OX=6239 GN=mml-1 PE=1 SV=2
Length=1009
Score = 39.9 bits (91), Expect = 0.093, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 0/69 (0%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
R + R H E+ RR + D+L ++P + K VL +
Sbjct 791 RQAPDSTLHPEERKRILHLHAEQNRRSALKDGFDQLMDIIPDLYSGGVKPTNAVVLAKSA 850
Query 120 QHMKTLRGA 128
H++ L+
Sbjct 851 DHIRRLQAE 859
>sp|P22980|MYOD1_CAEEL Myoblast determination protein 1 homolog
OS=Caenorhabditis elegans OX=6239 GN=hlh-1 PE=1 SV=2
Length=324
Score = 39.1 bits (89), Expect = 0.094, Method: Composition-based stats.
Identities = 24/142 (17%), Positives = 52/142 (37%), Gaps = 17/142 (12%)
Query 47 QESMDTDKDDPHGRLEYTEHQGRIKN--------AREAHSQIEKRRRDKMNSFIDELASL 98
Q +D+ +D G + R+A + E+RR K+N + +
Sbjct 122 QSRVDSQHEDTTTSTAGGAGVGGPRRTKFVLSVDRRKAATMRERRRLRKVNEAFEVVKQR 181
Query 99 VPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADG- 157
TC +++L K+ +LR A+ ++ + K T + + + + +G
Sbjct 182 --TCPNPNQRLPKVEILRSAIDYI----NNLERMLQQAGKMTKIMEQNQHLQMTQQINGA 235
Query 158 --FLFVVGCDRGKILFVSESVF 177
+V + E++F
Sbjct 236 PPHDYVTSSHFASSSYNPENMF 257
>sp|P39101|CAJ1_YEAST Protein CAJ1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) OX=559292 GN=CAJ1 PE=1 SV=1
Length=391
Score = 39.1 bits (89), Expect = 0.099, Method: Composition-based stats.
Identities = 17/78 (22%), Positives = 30/78 (38%), Gaps = 7/78 (9%)
Query 30 TSGVDCNRKRKGSSTDYQESMDTDKDDPHGRL----EYTEHQGRIKNAREAHS---QIEK 82
+ K T E+ D+ G + E + K ++E ++EK
Sbjct 111 NEATEMFGKEDEEGTAATETEKADESTDGGMVKHDTNKAESLKKDKLSKEQREKLMEMEK 170
Query 83 RRRDKMNSFIDELASLVP 100
+RR+ M +DELA +
Sbjct 171 KRREDMMKQVDELAEKLN 188
>sp|Q5XVH0|BH109_ARATH Transcription factor bHLH109 OS=Arabidopsis
thaliana OX=3702 GN=BHLH109 PE=1 SV=1
Length=185
Score = 38.3 bits (87), Expect = 0.099, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 40/89 (45%), Gaps = 9/89 (10%)
Query 45 DYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNA 104
+ E D + D+ R+ + + + E +EK+RR ++ +D L L+P
Sbjct 46 NDHEKHDEEPDEESYRM------AKRQRSMEYRMMMEKKRRKEIKDKVDILQGLMP---N 96
Query 105 MSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
K D + L ++++K+L+ + +
Sbjct 97 HCTKPDLASKLENIIEYIKSLKYQVDVMS 125
>sp|P11420|DA_DROME Protein daughterless OS=Drosophila melanogaster
OX=7227 GN=da PE=1 SV=1
Length=710
Score = 39.5 bits (90), Expect = 0.10, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 54/143 (38%), Gaps = 8/143 (6%)
Query 10 STISDFMSPGPTDL-LSSSLGTSGVDCNRKRKGSSTDYQESM--DTDKDDPHGRLEYTEH 66
ST S S +D +SS+ +S + +G T D+DD E
Sbjct 492 STTSSLTSLDISDTKPTSSIESSNSGLQQHSQGKGTKRPRRYCSSADEDDDA---EPAVK 548
Query 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLD-KLTVLRMAVQHMKTL 125
R K R+A++ E+ R +N + EL + + S K KL +L MAV+ + TL
Sbjct 549 AIREKERRQANNARERIRIRDINEALKELGRMC-MTHLKSDKPQTKLGILNMAVEVIMTL 607
Query 126 RGATNPYTEANYKPTFLSDDELK 148
+E K
Sbjct 608 EQQVRERNLNPKAACLKRREEEK 630
>sp|P41135|ID1_RAT DNA-binding protein inhibitor ID-1 OS=Rattus
norvegicus OX=10116 GN=Id1 PE=1 SV=1
Length=164
Score = 38.0 bits (86), Expect = 0.10, Method: Composition-based stats.
Identities = 14/47 (30%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query 88 MNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTE 134
MN L LVPT +RK+ K+ +L+ + +++ L+ N +E
Sbjct 62 MNGCYSRLKELVPTLPQ-NRKVSKVEILQHVIDYIRDLQLELNSESE 107
>sp|P20067|ID1_MOUSE DNA-binding protein inhibitor ID-1 OS=Mus
musculus OX=10090 GN=Id1 PE=1 SV=3
Length=168
Score = 38.0 bits (86), Expect = 0.11, Method: Composition-based stats.
Identities = 14/47 (30%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query 88 MNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTE 134
MN L LVPT +RK+ K+ +L+ + +++ L+ N +E
Sbjct 62 MNGCYSRLKELVPTLPQ-NRKVSKVEILQHVIDYIRDLQLELNSESE 107
>sp|O55208|FIGLA_MOUSE Factor in the germline alpha OS=Mus musculus
OX=10090 GN=Figla PE=2 SV=1
Length=194
Score = 38.0 bits (86), Expect = 0.12, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query 57 PHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR 116
P G T+ + R + E+ R +N +L +LVP SRK K+ +L+
Sbjct 44 PSGGYSTTDDLHLVLERRRVANAKERERIKNLNRGFAKLKALVPFLPQ-SRKPSKVDILK 102
Query 117 MAVQHMKTL 125
A ++++ L
Sbjct 103 GATEYIQIL 111
>sp|Q90260|ASL1B_DANRE Achaete-scute homolog 1b OS=Danio rerio
OX=7955 GN=ascl1b PE=2 SV=1
Length=195
Score = 38.0 bits (86), Expect = 0.12, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 38/105 (36%), Gaps = 14/105 (13%)
Query 86 DKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANY-------K 138
++N L VP A K+ K+ LR AV++++ L+ + + +
Sbjct 80 KQVNMGFQTLRQHVPNGAANK-KMSKVETLRSAVEYIRALQQLLDEHDAVSAVLQCGVPS 138
Query 139 PTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYS 183
P+ + + D G +S ++L+++
Sbjct 139 PSVSNAYSAGPESPHS------AYSSDEGSYEHLSSEEQELLDFT 177
>sp|P97309|MESP1_MOUSE Mesoderm posterior protein 1 OS=Mus musculus
OX=10090 GN=Mesp1 PE=2 SV=2
Length=243
Score = 38.3 bits (87), Expect = 0.13, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 44/125 (35%), Gaps = 6/125 (5%)
Query 4 QRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEY 63
Q + + S +SP S G S S P R
Sbjct 3 QPLCEPRSESWILSPAGRQPPMPSDGNSVCSPAWSSDPWDGAQASSPAPPCARPARRAGT 62
Query 64 TEHQGRIKNA-----REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK-LDKLTVLRM 117
+G + R++ S+ EK R + + EL +P A + + L K+ LR+
Sbjct 63 PGRRGTHGSRLGSGQRQSASEREKLRMRTLARALHELRRFLPPSVAPTGQNLTKIETLRL 122
Query 118 AVQHM 122
A++++
Sbjct 123 AIRYI 127
>sp|O94979|SC31A_HUMAN Protein transport protein Sec31A OS=Homo
sapiens OX=9606 GN=SEC31A PE=1 SV=3
Length=1220
Score = 39.5 bits (90), Expect = 0.13, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 38/123 (31%), Gaps = 17/123 (14%)
Query 465 SMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNI 524
PS + P P G G + A + P+S + P N
Sbjct 944 PPPPSSGASFQHGGPGAPPSSSAYALPPGTTGTLPAASEL---------PASQRTGPQNG 994
Query 525 TSTPPPDASSPGGKKILNGGTPDIPSSGLL--------SGQAQENPGYPYSDSSSILGEN 576
+ PP P KK+ P +P + + S Q+ P P SS
Sbjct 995 WNDPPALNRVPKKKKMPENFMPPVPITSPIMNPLGDPQSQMLQQQPSAPVPLSSQSSFPQ 1054
Query 577 PHI 579
PH+
Sbjct 1055 PHL 1057
>sp|Q32PV5|TCF21_DANRE Transcription factor 21 OS=Danio rerio
OX=7955 GN=tcf21 PE=2 SV=1
Length=176
Score = 37.6 bits (85), Expect = 0.14, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 48/128 (38%), Gaps = 17/128 (13%)
Query 4 QRMDISSTISDFMSPGP----TDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHG 59
+ +D PG T+ S+ G S +C KR+ S+ + + +
Sbjct 16 ELLDGLPKFGSGKDPGTSNESTEDSSNCEGASVSECTGKRRKSANMRRSAPN-------- 67
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
Q + R A + E+ R ++ L + +P + KL KL LR+A
Sbjct 68 ----GVAQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWVPPDT-KLSKLDTLRLAS 122
Query 120 QHMKTLRG 127
++ LR
Sbjct 123 SYIAHLRQ 130
>sp|Q8GXT3|BH123_ARATH Transcription factor bHLH123 OS=Arabidopsis
thaliana OX=3702 GN=BHLH123 PE=1 SV=1
Length=454
Score = 38.7 bits (88), Expect = 0.15, Method: Composition-based stats.
Identities = 17/91 (19%), Positives = 32/91 (35%), Gaps = 8/91 (9%)
Query 54 KDDPHGRLEYTEHQGRIKNAREAHSQI----EKRRRDKMNSFIDELASLVPTCNAMSRKL 109
+D ++ + + R +R++KM I L LV K
Sbjct 312 RDSSSNEVKRGGNDHQPAAKRAKSEAASPSPAFKRKEKMGDRIAALQQLVSPF----GKT 367
Query 110 DKLTVLRMAVQHMKTLRGATNPYTEANYKPT 140
D +VL A++++K L + + K
Sbjct 368 DAASVLSEAIEYIKFLHQQVSALSNPYMKSG 398
>sp|Q9LJX1|PRE5_ARATH Transcription factor PRE5 OS=Arabidopsis
thaliana OX=3702 GN=PRE5 PE=1 SV=1
Length=92
Score = 36.0 bits (81), Expect = 0.15, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 29/71 (41%), Gaps = 3/71 (4%)
Query 70 IKNAREAHSQIEKRRRDKMNSFIDELASLVPTCN--AMSRKLDKLTVLRMAVQHMKTLRG 127
+ +R+ + + D+M + +L +P + S K+ VL+ +++ L
Sbjct 3 NRRSRQTSN-ASRISDDQMIDLVSKLRQFLPEIHERRRSDKVSASKVLQETCNYIRKLHR 61
Query 128 ATNPYTEANYK 138
+ ++ +
Sbjct 62 EVDNLSDRLSQ 72
>sp|Q9VGJ5|FER3_DROME Protein Fer3 OS=Drosophila melanogaster
OX=7227 GN=fer3 PE=2 SV=2
Length=195
Score = 37.6 bits (85), Expect = 0.15, Method: Composition-based stats.
Identities = 17/59 (29%), Positives = 30/59 (51%), Gaps = 1/59 (2%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
T + R A + E+RR +N D+L VPT A ++L ++ LR+A+ ++
Sbjct 78 TRRRVASMAQRRAANIRERRRMFNLNEAFDKLRRKVPT-FAYEKRLSRIETLRLAITYI 135
>sp|P52550|MYBA_CHICK Myb-related protein A OS=Gallus gallus OX=9031
GN=MYBL1 PE=2 SV=1
Length=757
Score = 38.7 bits (88), Expect = 0.16, Method: Composition-based stats.
Identities = 34/172 (20%), Positives = 61/172 (35%), Gaps = 10/172 (6%)
Query 69 RIKNAREAHSQIEKR----RRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKT 124
+ + + ++ E R ++ + E+A L+P S K + +R V+
Sbjct 134 NPEVKKSSWTEAEDRVIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQEGY 193
Query 125 LRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQ 184
L+ T +E T + L + F V + S I + S
Sbjct 194 LQDGTKSSSERTGSSTLAQKPCVTMEHLHTQNQFYIPVQTHIPVYQYASPEDSCIEHASA 253
Query 185 ND-LIGQSLFDYLHPKDIAKVKE----QLSSSDTAPRERLIDAKTGLPVKTD 231
+ L+ QS D P K+KE +S+ + R+RL LP +
Sbjct 254 SANLVQQSFID-DDPDKEKKIKELELLLMSTENEIRRKRLSSQAGSLPGWSG 304
>sp|Q7RTS3|PTF1A_HUMAN Pancreas transcription factor 1 subunit
alpha OS=Homo sapiens OX=9606 GN=PTF1A PE=1 SV=1
Length=328
Score = 38.3 bits (87), Expect = 0.16, Method: Composition-based stats.
Identities = 15/49 (31%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
R+A + E+RR +N + L S +PT ++L K+ LR+A+ ++
Sbjct 165 RQAANVRERRRMQSINDAFEGLRSHIPTL-PYEKRLSKVDTLRLAIGYI 212
>sp|Q5E9S3|TCF21_BOVIN Transcription factor 21 OS=Bos taurus OX=9913
GN=TCF21 PE=2 SV=1
Length=179
Score = 37.6 bits (85), Expect = 0.16, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 36/98 (37%), Gaps = 5/98 (5%)
Query 30 TSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMN 89
+S + +KG + K P Q + R A + E+ R ++
Sbjct 41 SSNCEAGSPQKGRGGLGKRRKAPTKKSP----LSGVSQEGKQVQRNAANARERARMRVLS 96
Query 90 SFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
L + +P + KL KL LR+A ++ LR
Sbjct 97 KAFSRLKTTLPWVPPDT-KLSKLDTLRLASSYIAHLRQ 133
>sp|Q9CA46|BZIP8_ARATH Basic leucine zipper 8 OS=Arabidopsis thaliana
OX=3702 GN=BZIP8 PE=1 SV=1
Length=138
Score = 36.8 bits (83), Expect = 0.16, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 36/104 (35%), Gaps = 3/104 (3%)
Query 54 KDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDEL-ASLVPTCNAMSRKLDKL 112
E R + + ++ + +R R + ++EL + LV N +D+L
Sbjct 32 PATSDDSSRTAEDNERKRRRKVSNRESARRSRMRKQRHMEELWSMLVQLINKNKSLVDEL 91
Query 113 TVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAAD 156
+ R + K + E + + + L + AD
Sbjct 92 SQAREC--YEKVIEENMKLREENSKSRKMIGEIGLNRFLSVEAD 133
>sp|A5VUS1|LOVHK_BRUO2 Blue-light-activated histidine kinase OS=Brucella
ovis (strain ATCC 25840 / 63/290 / NCTC 10512) OX=444178
GN=BOV_A0554 PE=3 SV=2
Length=489
Score = 38.7 bits (88), Expect = 0.17, Method: Composition-based stats.
Identities = 14/90 (16%), Positives = 30/90 (33%), Gaps = 6/90 (7%)
Query 340 YVSRHAIDGKFVFVDQRATAILAYLPQELLG-TSCYEYFHQDDIGHLAECHRQVLQTREK 398
+ +R GK I + P E + + + +D + + Q + +
Sbjct 174 FWTREFYSGKMT-CSAECRRIYGFTPDEPVHFDTILDLVVLEDRMTVVQKAHQAVT--GE 230
Query 399 ITTNCYKFKIKDGSFITLRSRWFSFM--NP 426
+ Y+ + G L +R + NP
Sbjct 231 PYSIEYRIVTRLGETRWLETRAKALTGENP 260
Score = 38.0 bits (86), Expect = 0.31, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 43/131 (33%), Gaps = 5/131 (4%)
Query 310 NLSCLVAIGR--LHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
+L + GR L P E + M + H D VF + + Y E
Sbjct 4 DLRPFIPFGRGALSQATDPFRAAVEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADE 63
Query 368 LLGTSC-YEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNP 426
++G +C + H D H+ + + I + +K K G R N
Sbjct 64 VMGRNCRFLQGHGTDPAHVCAIKSAIAAEK-PIDIDIINYK-KSGEAFWNRLHISPVHNA 121
Query 427 WTKEVEYIVST 437
+ ++ S
Sbjct 122 NGRLQHFVSSQ 132
>sp|Q75KV9|BH148_ORYSJ Transcription factor BHLH148 OS=Oryza sativa
subsp. japonica OX=39947 GN=BHLH148 PE=1 SV=1
Length=299
Score = 38.3 bits (87), Expect = 0.17, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
R + + H E++RR+K++ +L ++V + K DK ++++ A
Sbjct 115 RRRRGQGADVESSRGFRHMMRERQRREKLSQSYADLYAMVSSR----SKGDKNSIVQSAA 170
Query 120 QHMKTLRGATNPYTEAN 136
++ L+ A + N
Sbjct 171 IYIHELKVARDQLQRRN 187
>sp|P26014|MYCN_SERCA N-myc proto-oncogene protein OS=Serinus
canaria OX=9135 GN=MYCN PE=3 SV=2
Length=427
Score = 38.3 bits (87), Expect = 0.18, Method: Composition-based stats.
Identities = 15/85 (18%), Positives = 33/85 (39%), Gaps = 0/85 (0%)
Query 66 HQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
R H+ +E++R + + S L V + + K K+ +L+ A +++ +L
Sbjct 337 SDSEDSERRRNHNILERQRANDLRSSFLTLRDHVLSELVQNEKAAKVVILKKATEYVHSL 396
Query 126 RGATNPYTEANYKPTFLSDDELKHL 150
+ K + LK +
Sbjct 397 QAEEQKLLLEKEKLQARQEQLLKKI 421
>sp|Q8K284|TF3C1_MOUSE General transcription factor 3C polypeptide
1 OS=Mus musculus OX=10090 GN=Gtf3c1 PE=1 SV=2
Length=2101
Score = 38.7 bits (88), Expect = 0.18, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query 12 ISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSST-DYQESMDTDKDDPHGR---LEYTEHQ 67
+ F+S P L S G + + D +E + D++ GR + + Q
Sbjct 1150 LQTFLSKRPMPLGSGGSGRLPLWSEGRADAELCADKEEQFELDREPTPGRNRKVRGGKSQ 1209
Query 68 GRIKNAREAHSQIEKRRRDK 87
R + +E + ++RRR +
Sbjct 1210 KRKRLKKEPIRKTKRRRRGE 1229
>sp|O43680|TCF21_HUMAN Transcription factor 21 OS=Homo sapiens
OX=9606 GN=TCF21 PE=1 SV=2
Length=179
Score = 37.2 bits (84), Expect = 0.20, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 36/98 (37%), Gaps = 5/98 (5%)
Query 30 TSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMN 89
+S + +KG + K P Q + R A + E+ R ++
Sbjct 41 SSNCENGSPQKGRGGLGKRRKAPTKKSP----LSGVSQEGKQVQRNAANARERARMRVLS 96
Query 90 SFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
L + +P + KL KL LR+A ++ LR
Sbjct 97 KAFSRLKTTLPWVPPDT-KLSKLDTLRLASSYIAHLRQ 133
>sp|Q86AC8|MYOG_DICDI Myosin-G heavy chain OS=Dictyostelium discoideum
OX=44689 GN=myoG PE=3 SV=1
Length=3446
Score = 38.7 bits (88), Expect = 0.22, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 42/130 (32%), Gaps = 12/130 (9%)
Query 122 MKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILN 181
+K + + E + F+ L+ A + F + G L S +
Sbjct 2895 VKERKQNNHNRGEPQFSTKFVESGSKHPLMPYAVNRFRSLTAFKLGDALKHSSN------ 2948
Query 182 YSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLCS 241
+ + LHP D + + D P + D KT L ++ I G +
Sbjct 2949 -PPD--SNSAFISDLHPDDRDIFLDIMKYMDDYP-KFPRDRKTRL-LQNVIQRGIDKPSL 3003
Query 242 GARRSFF-CR 250
FF CR
Sbjct 3004 RDEIYFFLCR 3013
>sp|P16076|MYODB_XENLA Myoblast determination protein 1 homolog
B OS=Xenopus laevis OX=8355 GN=myod1-b PE=2 SV=1
Length=287
Score = 38.0 bits (86), Expect = 0.23, Method: Composition-based stats.
Identities = 16/65 (25%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
R A + E+RR K+N + L T +++L K+ +LR A+ ++ +L+
Sbjct 97 RRRAATMRERRRLSKVNDAFETLKRC--TSTNPNQRLPKVDILRNAISYIDSLQTLLRDQ 154
Query 133 TEANY 137
++ Y
Sbjct 155 EQSLY 159
>sp|Q63505|TF3C1_RAT General transcription factor 3C polypeptide
1 OS=Rattus norvegicus OX=10116 GN=Gtf3c1 PE=1 SV=1
Length=2148
Score = 38.7 bits (88), Expect = 0.23, Method: Composition-based stats.
Identities = 18/80 (23%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query 12 ISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSST-DYQESMDTDKDDPHGR---LEYTEHQ 67
+ F+S P L S G + K D +E + D++ GR + + Q
Sbjct 1149 LQTFLSKRPMPLGSGGSGRLPLWSEGKADAELCADKEEHFELDREPTPGRNRKVRGGKSQ 1208
Query 68 GRIKNAREAHSQIEKRRRDK 87
R + +E + ++RRR +
Sbjct 1209 KRKRLKKEPIRKTKRRRRGE 1228
>sp|O35437|TCF21_MOUSE Transcription factor 21 OS=Mus musculus
OX=10090 GN=Tcf21 PE=2 SV=1
Length=179
Score = 36.8 bits (83), Expect = 0.24, Method: Composition-based stats.
Identities = 21/97 (22%), Positives = 35/97 (36%), Gaps = 5/97 (5%)
Query 31 SGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNS 90
S + +KG + K P Q + R A + E+ R ++
Sbjct 42 SNCENGSPQKGRGGLGKRRKAPTKKSP----LSGVSQEGKQVQRNAANARERARMRVLSK 97
Query 91 FIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
L + +P + KL KL LR+A ++ LR
Sbjct 98 AFSRLKTTLPWVPPDT-KLSKLDTLRLASSYIAHLRQ 133
>sp|Q0DDF6|ILI4_ORYSJ Transcription factor ILI4 OS=Oryza sativa
subsp. japonica OX=39947 GN=ILI4 PE=1 SV=1
Length=87
Score = 35.3 bits (79), Expect = 0.24, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 24/58 (41%), Gaps = 1/58 (2%)
Query 88 MNSFIDELASLVPTC-NAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSD 144
+N I +L SL+P+ + + +L+ ++K+L + ++ D
Sbjct 16 INELISKLQSLLPSSRRRGANQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMAGMD 73
>sp|A2YAW8|ILI4_ORYSI Transcription factor ILI4 OS=Oryza sativa
subsp. indica OX=39946 GN=ILI4 PE=3 SV=1
Length=87
Score = 35.3 bits (79), Expect = 0.24, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 24/58 (41%), Gaps = 1/58 (2%)
Query 88 MNSFIDELASLVPTC-NAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSD 144
+N I +L SL+P+ + + +L+ ++K+L + ++ D
Sbjct 16 INELISKLQSLLPSSRRRGANQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMAGMD 73
>sp|P21438|MYC_FLVTT Viral myc transforming protein OS=Feline
leukemia virus FTT OX=11923 GN=MYC PE=3 SV=2
Length=437
Score = 38.0 bits (86), Expect = 0.26, Method: Composition-based stats.
Identities = 15/94 (16%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
R TE + + + +E++RR+++ L +P + K K+ +L+ A
Sbjct 346 RSSDTEENDKRRTD----NVLERQRRNELKRSFFALRDQIPELEN-NEKAPKVVILKKAT 400
Query 120 QHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
++ +++ + ++LKH + +
Sbjct 401 AYILSVQAGEQKLI-SEKDLLRKRREQLKHKLEQ 433
>sp|Q17295|MYOD1_CAEBR Myoblast determination protein 1 homolog
OS=Caenorhabditis briggsae OX=6238 GN=hlh-1 PE=2 SV=1
Length=329
Score = 37.6 bits (85), Expect = 0.26, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 24/124 (19%)
Query 4 QRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEY 63
Q ++SS S+ P TDLL + SG D+ P L
Sbjct 110 QEKEVSSGGSNNNDPTSTDLLGDGVAHSG--------------------DETAPIATLVA 149
Query 64 TEHQGRIKN--AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQH 121
+ R R+A + E+RR K+N + + TC +++L K+ +LR A+ +
Sbjct 150 GANAPRRTKLDRRKAATMRERRRLRKVNEAFEVVKQR--TCPNPNQRLPKVEILRSAIDY 207
Query 122 MKTL 125
+ TL
Sbjct 208 INTL 211
>sp|Q9LT67|BH113_ARATH Transcription factor bHLH113 OS=Arabidopsis
thaliana OX=3702 GN=BHLH113 PE=2 SV=1
Length=270
Score = 37.6 bits (85), Expect = 0.27, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 56/158 (35%), Gaps = 15/158 (9%)
Query 3 DQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDK----DDPH 58
D+ + + ++ + G +DL S + +DC + D T K +
Sbjct 76 DESLFLEPSVP---TSGVSDLDPSCI---KIDCRNSNDACTVDKSTKSSTKKRTGTGNGQ 129
Query 59 GRLEYTEHQGRIKNAREAHSQ-IEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRM 117
+ + + K +E S I K R++++ I L LV K D +VL
Sbjct 130 ESDQNRKPGKKGKRNQEKSSVGIAKVRKERLGERIAALQQLVSP----YGKTDAASVLHE 185
Query 118 AVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAA 155
A+ ++K L+ L + ++ A
Sbjct 186 AMGYIKFLQDQIQVLCSPYLINHSLDGGVVTGDVMAAM 223
>sp|Q8W2F2|BH011_ARATH Transcription factor bHLH11 OS=Arabidopsis
thaliana OX=3702 GN=BHLH11 PE=2 SV=2
Length=286
Score = 37.6 bits (85), Expect = 0.27, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 9/88 (10%)
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
+ + ++ EK RRDK+ EL + + + K DK +VL +Q +K +
Sbjct 41 KKEAVCSQKAEREKLRRDKLKEQFLELGNAL---DPNRPKSDKASVLTDTIQMLKDVMNQ 97
Query 129 TNPYTE------ANYKPTFLSDDELKHL 150
+ + EL+
Sbjct 98 VDRLKAEYETLSQESRELIQEKSELREE 125
>sp|P79920|NDF4_XENLA Neurogenic differentiation factor 4 OS=Xenopus
laevis OX=8355 GN=neurod4 PE=1 SV=1
Length=315
Score = 37.6 bits (85), Expect = 0.28, Method: Composition-based stats.
Identities = 25/126 (20%), Positives = 45/126 (36%), Gaps = 23/126 (18%)
Query 76 AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA 135
+ E+ R +N ++ L ++P C + ++KL K+ LR+A ++ L A
Sbjct 82 KANARERSRMHGLNDALENLRRVMP-CYSKTQKLSKIETLRLARNYIWALSDILEQGQNA 140
Query 136 NYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNY-SQNDLIGQSLFD 194
K GFL ++ +G S V L Q + + +
Sbjct 141 EGK------------------GFLEILC--KGLSQPTSNLVAGCLQLGPQAMFLDKH-EE 179
Query 195 YLHPKD 200
H D
Sbjct 180 KSHICD 185
>sp|P34060|MYOG_COTJA Myogenin OS=Coturnix japonica OX=93934 GN=MYOG
PE=2 SV=1
Length=226
Score = 37.2 bits (84), Expect = 0.28, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
R A + EKRR K+N + L T +++L K+ +LR ++Q+ + L+ +
Sbjct 83 RRRAATLREKRRLKKVNEAFEALKR--STLLNPNQRLPKVEILRSSIQYTERLQSLLSLN 140
Query 133 TEA 135
+
Sbjct 141 QQE 143
>sp|Q9NZB2|F120A_HUMAN Constitutive coactivator of PPAR-gamma-like
protein 1 OS=Homo sapiens OX=9606 GN=FAM120A PE=1 SV=2
Length=1118
Score = 38.0 bits (86), Expect = 0.30, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 58/198 (29%), Gaps = 28/198 (14%)
Query 391 QVLQTREKITTNCYKFKIKDGSFITLRSRWFSF--MNPWTKEVEYIVSTNTVVLANVLEG 448
QV Y + + + + +TL + + N ++ +T + E
Sbjct 380 QVPSPGGAPGQGPYPYSLSEPAPLTLDTSGKNLTEQNSYSNIPHE--GKHT----PLYER 433
Query 449 GDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAG-KIGRMIAEEIMEIH 507
P P + SP+ +DS G + G G T +G KIG E
Sbjct 434 SSPINPAQSGSPNHVDSAYFPGS-STSSSSDNDEGSGGATNHISGNKIGWEKTGSHSEPQ 492
Query 508 ---------RIRGSSPSSCG-----SSPLNITSTPPPDA----SSPGGKKILNGGTPDIP 549
+ GSS +S G + + P + I P +
Sbjct 493 ARGDPGDQTKAEGSSTASSGSQLAEGKGSQMGTVQPIPCLLSMPTRNHMDITTPPLPPVA 552
Query 550 SSGLLSGQAQENPGYPYS 567
L + + G Y
Sbjct 553 PEVLRVAEHRHKKGLMYP 570
>sp|Q7XJU1|BH154_ARATH Transcription factor bHLH154 OS=Arabidopsis
thaliana OX=3702 GN=BHLH154 PE=1 SV=1
Length=153
Score = 36.4 bits (82), Expect = 0.30, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 40/103 (39%), Gaps = 5/103 (5%)
Query 60 RLEYTEHQGRIKNAREAH-SQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMA 118
R Y+ +IK + + S K R+DK+ I L LV K D +VL
Sbjct 16 RNVYSLEDNKIKRHKSSDLSFSSKERKDKLAERISALQQLVSP----YGKTDTASVLLEG 71
Query 119 VQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFV 161
+Q+++ L+ + + T + +E + G V
Sbjct 72 MQYIQFLQEQVKVLSAPYLQATPSTTEEEVEEYSLRSKGLCLV 114
>sp|P12525|MYCP1_HUMAN Putative myc-like protein MYCLP1 OS=Homo
sapiens OX=9606 GN=MYCLP1 PE=5 SV=2
Length=358
Score = 37.6 bits (85), Expect = 0.31, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 7/105 (7%)
Query 37 RKRKGSSTDYQESMDT-----DKDDPHGRLEYTEH-QGRIKNAREAHSQIEKRRRDKMNS 90
R+ G D ++ + + H ++ HS +E++RR+ S
Sbjct 234 REAPGGKDDKEDEEIVSLPPVESEAAQSCQPKPIHYDTENWTKKKYHSYLERKRRNDQRS 293
Query 91 FIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA 135
L VP A ++ K+ +L A +++ L A
Sbjct 294 RFLALRDEVPAL-ASCSRVSKVMILVKATEYLHELAEAEERMATE 337
>sp|P34555|HLH4_CAEEL Helix-loop-helix protein 4 OS=Caenorhabditis
elegans OX=6239 GN=hlh-4 PE=2 SV=1
Length=205
Score = 36.8 bits (83), Expect = 0.34, Method: Composition-based stats.
Identities = 11/51 (22%), Positives = 24/51 (47%), Gaps = 0/51 (0%)
Query 75 EAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
+ E+ R +N L +P+ ++++ KL +L A+ ++ TL
Sbjct 6 AKRNARERTRVHTVNQAFLVLKQHLPSLRQFTKRVSKLRILNAAITYIDTL 56
>sp|Q29031|MYC_PIG Myc proto-oncogene protein OS=Sus scrofa OX=9823
GN=MYC PE=1 SV=2
Length=452
Score = 37.6 bits (85), Expect = 0.35, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 31/76 (41%), Gaps = 5/76 (7%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
R TE + R H+ +E++RR+++ +P + K K+ +L+ A
Sbjct 359 RSSDTEENDK----RRTHNVLERQRRNELKRSFFARRDQIPELEN-NEKAPKVVILKKAT 413
Query 120 QHMKTLRGATNPYTEA 135
++ +++
Sbjct 414 AYILSVQAEEQKLVSE 429
>sp|Q338G6|ILI7_ORYSJ Transcription factor ILI7 OS=Oryza sativa
subsp. japonica OX=39947 GN=ILI7 PE=3 SV=1
Length=91
Score = 34.9 bits (78), Expect = 0.35, Method: Composition-based stats.
Identities = 8/65 (12%), Positives = 27/65 (42%), Gaps = 1/65 (2%)
Query 86 DKMNSFIDELASLVPTCN-AMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSD 144
+++ + +L +L+P + ++ VL+ ++++L + +E + +D
Sbjct 18 EQIGDLVSKLQALLPEARLRSNDRVPSARVLQETCSYIRSLHREVDDLSERLAELLAAAD 77
Query 145 DELKH 149
Sbjct 78 VSTAQ 82
>sp|A2Z730|ILI7_ORYSI Transcription factor ILI7 OS=Oryza sativa
subsp. indica OX=39946 GN=ILI7 PE=3 SV=1
Length=91
Score = 34.9 bits (78), Expect = 0.35, Method: Composition-based stats.
Identities = 8/65 (12%), Positives = 27/65 (42%), Gaps = 1/65 (2%)
Query 86 DKMNSFIDELASLVPTCN-AMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSD 144
+++ + +L +L+P + ++ VL+ ++++L + +E + +D
Sbjct 18 EQIGDLVSKLQALLPEARLRSNDRVPSARVLQETCSYIRSLHREVDDLSERLAELLAAAD 77
Query 145 DELKH 149
Sbjct 78 VSTAQ 82
>sp|P22816|MYOD_DROME Myogenic-determination protein OS=Drosophila
melanogaster OX=7227 GN=nau PE=2 SV=3
Length=332
Score = 37.2 bits (84), Expect = 0.35, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
R+A + E+RR K+N + L T + +++L K+ +LR A++++++L
Sbjct 162 RRKAATMRERRRLRKVNEAFEILKRR--TSSNPNQRLPKVEILRNAIEYIESLEDLLQES 219
Query 133 TE 134
+
Sbjct 220 ST 221
>sp|Q0DUR2|ILI6_ORYSJ Transcription factor ILI6 OS=Oryza sativa
subsp. japonica OX=39947 GN=ILI6 PE=1 SV=1
Length=92
Score = 34.9 bits (78), Expect = 0.38, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 27/60 (45%), Gaps = 1/60 (2%)
Query 86 DKMNSFIDELASLVPTCN-AMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSD 144
++++ + +L L+P + ++ VL+ ++++L + +E + SD
Sbjct 19 EQISDLVSKLQDLLPEARLRSNDRVPSSRVLQETCNYIRSLHQEVDDLSERLSELLATSD 78
>sp|B8APB5|ILI6_ORYSI Transcription factor ILI6 OS=Oryza sativa
subsp. indica OX=39946 GN=ILI6 PE=3 SV=1
Length=92
Score = 34.9 bits (78), Expect = 0.38, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 27/60 (45%), Gaps = 1/60 (2%)
Query 86 DKMNSFIDELASLVPTCN-AMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSD 144
++++ + +L L+P + ++ VL+ ++++L + +E + SD
Sbjct 19 EQISDLVSKLQDLLPEARLRSNDRVPSSRVLQETCNYIRSLHQEVDDLSERLSELLATSD 78
>sp|Q69V10|BH062_ORYSJ Transcription factor BHLH062 OS=Oryza sativa
subsp. japonica OX=39947 GN=BHLH062 PE=1 SV=1
Length=265
Score = 36.8 bits (83), Expect = 0.40, Method: Composition-based stats.
Identities = 17/71 (24%), Positives = 27/71 (38%), Gaps = 3/71 (4%)
Query 68 GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
+ R S+ EK +RDK N +EL +L+ + K VL + +K L
Sbjct 31 DKKAPKRIHKSEREKLKRDKQNDLFNELGNLLEPDRQNNG---KACVLGETTRILKDLLS 87
Query 128 ATNPYTEANYK 138
+ N
Sbjct 88 QVESLRKENSS 98
>sp|B6VQA1|DIMM_DROME Protein dimmed OS=Drosophila melanogaster
OX=7227 GN=dimm PE=1 SV=1
Length=390
Score = 37.2 bits (84), Expect = 0.41, Method: Composition-based stats.
Identities = 16/96 (17%), Positives = 33/96 (34%), Gaps = 1/96 (1%)
Query 60 RLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
R + + R ++ E+ R +N L ++P M R+L K+ L +A
Sbjct 144 RRKGALNAKERNMRRLESNERERMRMHSLNDAFQSLREVIPHVE-MERRLSKIETLTLAK 202
Query 120 QHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAA 155
++ L L+ + ++L
Sbjct 203 NYIINLTHIILSKRNEEAAALELNSGAVGGVLLSNL 238
>sp|G5EEQ5|REF1_CAEEL Regulator of fusion ref-1 OS=Caenorhabditis
elegans OX=6239 GN=ref-1 PE=1 SV=1
Length=367
Score = 37.2 bits (84), Expect = 0.41, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 14/89 (16%)
Query 81 EKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPT 140
EK+RRD++N+ I EL L+ + + K+ + VL AV+ + + + + +
Sbjct 20 EKKRRDEINAKIKELQLLI-QNESDNEKMTQGDVLNRAVEVVSRMETESPGPSSNPNRKG 78
Query 141 FLSDDELKHLILRAADGFLFVVGCDRGKI 169
F DGF + I
Sbjct 79 FF-------------DGFRSIESLTYSFI 94
>sp|Q4R535|CELF4_MACFA CUGBP Elav-like family member 4 OS=Macaca
fascicularis OX=9541 GN=CELF4 PE=2 SV=1
Length=474
Score = 37.2 bits (84), Expect = 0.43, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 30/82 (37%), Gaps = 1/82 (1%)
Query 513 SPSSCGSSPLNITSTPPPDASSPGGKKILNGGTPDIPSSGLLSGQAQENPGYPYSDSSSI 572
+P+S GS+P IT+ P SP G G P + + N +PY S
Sbjct 302 TPTSGGSTPPGITAPAVPSIPSPIGVNGFTG-LPPQANGQPAAEAVFANGIHPYPAQSPT 360
Query 573 LGENPHIGIDMIDNDQGSSSPS 594
+ + G + P+
Sbjct 361 AADPLQQAYAGVQQYAGPAYPA 382
>sp|Q90259|ASL1A_DANRE Achaete-scute homolog 1a OS=Danio rerio
OX=7955 GN=ascl1a PE=2 SV=1
Length=196
Score = 36.4 bits (82), Expect = 0.44, Method: Composition-based stats.
Identities = 15/66 (23%), Positives = 26/66 (39%), Gaps = 4/66 (6%)
Query 89 NSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELK 148
N+ L VP A K+ K+ LR AV++++ L+ + E + L
Sbjct 95 NNGFATLREHVPNGAANK-KMSKVETLRSAVEYIRALQQLLD---EHDAVSAAFQSGVLS 150
Query 149 HLILRA 154
I +
Sbjct 151 PTISQN 156
>sp|Q90417|RXRBB_DANRE Retinoic acid receptor RXR-beta-B OS=Danio
rerio OX=7955 GN=rxrbb PE=2 SV=1
Length=422
Score = 37.2 bits (84), Expect = 0.48, Method: Composition-based stats.
Identities = 13/53 (25%), Positives = 18/53 (34%), Gaps = 0/53 (0%)
Query 476 RTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTP 528
+ PG+PG G G I M + R+ S S P + S
Sbjct 26 SSSIGSPGVPGTPSIGYGPISNSQINSSMSVSRLHAVSSSDDVKPPFGLKSVS 78
>sp|Q8IWI9|MGAP_HUMAN MAX gene-associated protein OS=Homo sapiens
OX=9606 GN=MGA PE=1 SV=4
Length=3065
Score = 37.6 bits (85), Expect = 0.50, Method: Composition-based stats.
Identities = 14/62 (23%), Positives = 26/62 (42%), Gaps = 2/62 (3%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
R H+ E+RRR +M ++L + + S K+ K +L A ++ L +
Sbjct 2425 RRTHTANERRRRGEMRDLFEKLKITLGLLH--SSKVSKSLILTRAFSEIQGLTDQADKLI 2482
Query 134 EA 135
Sbjct 2483 GQ 2484
>sp|M0QWB7|ASCL5_MOUSE Achaete-scute homolog 5 OS=Mus musculus
OX=10090 GN=Ascl5 PE=1 SV=1
Length=188
Score = 36.0 bits (81), Expect = 0.51, Method: Composition-based stats.
Identities = 12/53 (23%), Positives = 26/53 (49%), Gaps = 1/53 (2%)
Query 75 EAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
+ ++ E++R +N L +P +L K+ LR A++++K L+
Sbjct 83 QKRNERERQRVKCVNEGYARLRGHLPGALTEK-RLSKVETLRAAIRYIKYLQE 134
>sp|Q9BRJ9|MESP1_HUMAN Mesoderm posterior protein 1 OS=Homo sapiens
OX=9606 GN=MESP1 PE=1 SV=1
Length=268
Score = 36.8 bits (83), Expect = 0.52, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 39/110 (35%), Gaps = 6/110 (5%)
Query 27 SLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRD 86
S G++ D + D P R++ S+ EK R
Sbjct 42 SWGSTPADSPVASPARPGTLR-----DPRAPSVGRRGARSSRLGSGQRQSASEREKLRMR 96
Query 87 KMNSFIDELASLVPTCNAMSRK-LDKLTVLRMAVQHMKTLRGATNPYTEA 135
+ + EL +P A + + L K+ LR+A++++ L E+
Sbjct 97 TLARALHELRRFLPPSVAPAGQSLTKIETLRLAIRYIGHLSAVLGLSEES 146
>sp|A2AWL7|MGAP_MOUSE MAX gene-associated protein OS=Mus musculus
OX=10090 GN=Mga PE=2 SV=1
Length=3003
Score = 37.6 bits (85), Expect = 0.54, Method: Composition-based stats.
Identities = 14/62 (23%), Positives = 26/62 (42%), Gaps = 2/62 (3%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
R H+ E+RRR +M ++L + + S K+ K +L A ++ L +
Sbjct 2364 RRTHTANERRRRGEMRDLFEKLKITLGLLH--SSKVSKSLILNRAFSEIQGLTDQADKLI 2421
Query 134 EA 135
Sbjct 2422 GQ 2423
>sp|Q9EQW6|OLIG2_MOUSE Oligodendrocyte transcription factor 2
OS=Mus musculus OX=10090 GN=Olig2 PE=1 SV=1
Length=323
Score = 36.8 bits (83), Expect = 0.58, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 10/135 (7%)
Query 8 ISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHG-------R 60
+SS+ P + L ++G SG K G S + +
Sbjct 39 VSSSTPSDCPPELSSELRGAMGASGAHPGDKLGGGGFKSSSSSTSSSTSSAATSSTKKDK 98
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMS-RKLDKLTVLRMAV 119
+ TE + + + E++R +N +D L ++P + S RKL K+ L +A
Sbjct 99 KQMTEPELQQLRLKINSR--ERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLAR 156
Query 120 QHMKTLRGATNPYTE 134
++ L +
Sbjct 157 NYILMLTNSLEEMKR 171
>sp|Q24JP5|T132A_HUMAN Transmembrane protein 132A OS=Homo sapiens
OX=9606 GN=TMEM132A PE=1 SV=1
Length=1023
Score = 37.2 bits (84), Expect = 0.59, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 38/123 (31%), Gaps = 12/123 (10%)
Query 426 PWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIP 485
P + + N V L E + + P + P GG PG P
Sbjct 887 PTSPQPH-----NWVWLGTDQEELSRQLDRQSPGPPKGEGSCPCESGGGGEAPTLAPGPP 941
Query 486 GGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGGT 545
GGT + + + R A R +P +P +P + IL G
Sbjct 942 GGTTSSSSTLARKEAG-------GRRKRVEFVTFAPAPPAQSPEEPVGAPAVQSILVAGE 994
Query 546 PDI 548
DI
Sbjct 995 EDI 997
>sp|O08574|MESP2_MOUSE Mesoderm posterior protein 2 OS=Mus musculus
OX=10090 GN=Mesp2 PE=1 SV=1
Length=370
Score = 36.4 bits (82), Expect = 0.69, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK-LDKLTVLRMAVQHMKTLRGATNPY 132
R++ S+ EK R + + EL +P A + + L K+ LR+A++++ L
Sbjct 81 RQSASEREKLRMRTLARALQELRRFLPPSVAPAGQSLTKIETLRLAIRYIGHLSALLGLS 140
Query 133 TEANYKPTFLS-DDELKHLILRAADG 157
++ + S D H + DG
Sbjct 141 EDSLRRRRRRSADAAFSHRCPQCPDG 166
>sp|Q7JGP2|TWST1_MACTO Twist-related protein 1 OS=Macaca tonkeana
OX=40843 GN=TWIST1 PE=3 SV=1
Length=201
Score = 35.7 bits (80), Expect = 0.71, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 31/87 (36%), Gaps = 2/87 (2%)
Query 36 NRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDEL 95
KR S + ++ R + E++R +N L
Sbjct 71 QGKRGKKSAGCGGGGSAGGGGSSSGGGSPQSYEELQTQRVMANVRERQRTQSLNEAFAAL 130
Query 96 ASLVPTCNAMSRKLDKLTVLRMAVQHM 122
++PT S KL K+ L++A +++
Sbjct 131 RKIIPT--LPSDKLSKIQTLKLAARYI 155
>sp|Q04657|KATG_MYCIT Catalase-peroxidase OS=Mycobacterium intracellulare
OX=1767 GN=katG PE=3 SV=1
Length=746
Score = 36.8 bits (83), Expect = 0.72, Method: Composition-based stats.
Identities = 15/76 (20%), Positives = 27/76 (36%), Gaps = 6/76 (8%)
Query 542 NGGTPDIPSSGLLSGQAQENPGYPYS---DSSSILGEN---PHIGIDMIDNDQGSSSPSN 595
+ P P SG S ENP P + + + + + + S+P
Sbjct 6 SSSRPPQPDSGTASKSESENPAIPSPKPKAHAPLTNRDWWPDQVDVSSLHPHSPLSNPLG 65
Query 596 DEAAMAVIMSLLEADA 611
D+ A + L+ +A
Sbjct 66 DDFDYAAEFAKLDVEA 81
>sp|Q13516|OLIG2_HUMAN Oligodendrocyte transcription factor 2
OS=Homo sapiens OX=9606 GN=OLIG2 PE=1 SV=2
Length=323
Score = 36.4 bits (82), Expect = 0.75, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 51/135 (38%), Gaps = 10/135 (7%)
Query 8 ISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSS-------TDYQESMDTDKDDPHGR 60
+SS+ P + L ++G++G K GS T S +
Sbjct 39 VSSSTPSDCPPELSAELRGAMGSAGAHPGDKLGGSGFKSSSSSTSSSTSSAAASSTKKDK 98
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMS-RKLDKLTVLRMAV 119
+ TE + + + E++R +N +D L ++P + S RKL K+ L +A
Sbjct 99 KQMTEPELQQLRLKINSR--ERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLAR 156
Query 120 QHMKTLRGATNPYTE 134
++ L +
Sbjct 157 NYILMLTNSLEEMKR 171
>sp|Q9FLE9|PRE1_ARATH Transcription factor PRE1 OS=Arabidopsis
thaliana OX=3702 GN=PRE1 PE=1 SV=1
Length=92
Score = 33.7 bits (75), Expect = 0.79, Method: Composition-based stats.
Identities = 10/56 (18%), Positives = 25/56 (45%), Gaps = 4/56 (7%)
Query 86 DKMNSFIDELASLVPTCNAMSRKLDKLT---VLRMAVQHMKTLRGATNPYTEANYK 138
++M + +L ++P R+ DK + VL+ +++ L + +E +
Sbjct 18 NQMIDLVSKLRQILPEI-GQRRRSDKASASKVLQETCNYIRNLNREVDNLSERLSQ 72
>sp|E0X9C7|TODS_PSEPT Sensor histidine kinase TodS OS=Pseudomonas
putida (strain DOT-T1E) OX=1196325 GN=todS PE=1 SV=1
Length=978
Score = 36.8 bits (83), Expect = 0.82, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 27/79 (34%), Gaps = 0/79 (0%)
Query 345 AIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCY 404
+ + + + I Y ++L G S + D+ + + +LQ +
Sbjct 630 DPENRILNANPAFQRITGYGEKDLEGLSMEQLTPSDESPQIKQRLANLLQGGGAEYSVER 689
Query 405 KFKIKDGSFITLRSRWFSF 423
+ K+GS I +
Sbjct 690 SYLCKNGSTIWANASVSLM 708
>sp|A5W4E3|TODS_PSEP1 Sensor histidine kinase TodS OS=Pseudomonas
putida (strain ATCC 700007 / DSM 6899 / JCM 31910 / BCRC
17059 / LMG 24140 / F1) OX=351746 GN=todS PE=1 SV=1
Length=978
Score = 36.8 bits (83), Expect = 0.82, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 27/79 (34%), Gaps = 0/79 (0%)
Query 345 AIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCY 404
+ + + + I Y ++L G S + D+ + + +LQ +
Sbjct 630 DPENRILNANPAFQRITGYGEKDLEGLSMEQLTPSDESPQIKQRLANLLQGGGAEYSVER 689
Query 405 KFKIKDGSFITLRSRWFSF 423
+ K+GS I +
Sbjct 690 SYLCKNGSTIWANASVSLM 708
>sp|Q8MIF3|TWST1_EULFU Twist-related protein 1 OS=Eulemur fulvus
fulvus OX=40322 GN=TWIST1 PE=3 SV=1
Length=198
Score = 35.7 bits (80), Expect = 0.83, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
+ ++ R + E++R +N L ++PT S KL K+ L++A +++
Sbjct 96 PQSYEELQTQRVMANVRERQRTQSLNEAFAALRKIIPT--LPSDKLSKIQTLKLAARYI 152
>sp|Q8MID5|TWST1_MICMU Twist-related protein 1 OS=Microcebus murinus
OX=30608 GN=TWIST1 PE=3 SV=1
Length=199
Score = 35.7 bits (80), Expect = 0.83, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
+ ++ R + E++R +N L ++PT S KL K+ L++A +++
Sbjct 97 PQSYEELQTQRVMANVRERQRTQSLNEAFAALRKIIPT--LPSDKLSKIQTLKLAARYI 153
>sp|Q7RTU5|ASCL5_HUMAN Achaete-scute homolog 5 OS=Homo sapiens
OX=9606 GN=ASCL5 PE=1 SV=2
Length=278
Score = 36.0 bits (81), Expect = 0.84, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 31/66 (47%), Gaps = 1/66 (2%)
Query 75 EAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTE 134
+ ++ E++R +N L +P A +L K+ LR A++++K L+ + +
Sbjct 158 QKRNERERQRVKCVNEGYARLRGHLPGALAEK-RLSKVETLRAAIRYIKYLQELLSSAPD 216
Query 135 ANYKPT 140
+ P
Sbjct 217 GSTPPA 222
>sp|Q9JJR7|ASCL3_MOUSE Achaete-scute homolog 3 OS=Mus musculus
OX=10090 GN=Ascl3 PE=2 SV=1
Length=174
Score = 35.3 bits (79), Expect = 0.87, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 27/52 (52%), Gaps = 1/52 (2%)
Query 76 AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRG 127
++ E++R +N L +P + + ++L K+ LR A++++ L+
Sbjct 96 KRNERERQRVKCVNEGYARLRRHLP-EDYLEKRLSKVETLRAAIKYISYLQS 146
>sp|P26687|TWST1_MOUSE Twist-related protein 1 OS=Mus musculus
OX=10090 GN=Twist1 PE=1 SV=1
Length=206
Score = 35.7 bits (80), Expect = 0.87, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
+ ++ R + E++R +N L ++PT S KL K+ L++A +++
Sbjct 104 PQSYEELQTQRVMANVRERQRTQSLNEAFAALRKIIPT--LPSDKLSKIQTLKLAARYI 160
>sp|Q8MIB5|TWST1_SAGOE Twist-related protein 1 OS=Saguinus oedipus
OX=9490 GN=TWIST1 PE=3 SV=1
Length=203
Score = 35.7 bits (80), Expect = 0.89, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
+ ++ R + E++R +N L ++PT S KL K+ L++A +++
Sbjct 101 PQSYEELQTQRVMANVRERQRTQSLNEAFAALRKIIPT--LPSDKLSKIQTLKLAARYI 157
>sp|Q8MIE7|TWST1_NOMCO Twist-related protein 1 OS=Nomascus concolor
OX=29089 GN=TWIST1 PE=3 SV=1
Length=204
Score = 35.7 bits (80), Expect = 0.92, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
+ ++ R + E++R +N L ++PT S KL K+ L++A +++
Sbjct 102 PQSYEELQTQRVMANVRERQRTQSLNEAFAALRKIIPT--LPSDKLSKIQTLKLAARYI 158
>sp|Q3KP66|INAVA_HUMAN Innate immunity activator protein OS=Homo
sapiens OX=9606 GN=INAVA PE=1 SV=2
Length=663
Score = 36.4 bits (82), Expect = 0.93, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 36/137 (26%), Gaps = 10/137 (7%)
Query 437 TNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIG 496
T+ V P SG +HPT PG + +
Sbjct 427 THYTVTVPD--SCFPATKPPLPHAACHSCSEDSGSDVSSISHPTSPGSSSPDISFLQPLS 484
Query 497 RMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGGTPDIPSSGLLSG 556
HR S + PP P G+ ++ +P P L
Sbjct 485 PPKT----HRHRGAWVPAGSRELVAHHPKLLLPP-GYFPAGRYVVVAESPLPPGEWELRR 539
Query 557 QAQENPGYPYSDSSSIL 573
A PG Y + + L
Sbjct 540 AA---PGPAYEEEGTPL 553
>sp|P09774|AST3_DROME Achaete-scute complex protein T3 OS=Drosophila
melanogaster OX=7227 GN=l(1)sc PE=2 SV=2
Length=257
Score = 35.7 bits (80), Expect = 0.95, Method: Composition-based stats.
Identities = 16/70 (23%), Positives = 33/70 (47%), Gaps = 9/70 (13%)
Query 86 DKMNSFIDELASLVPTC---------NAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEAN 136
++N+ L +P S+KL K+ LR+AV++++ L+ + T ++
Sbjct 97 KQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDMLDDGTASS 156
Query 137 YKPTFLSDDE 146
+ + S DE
Sbjct 157 TRHIYNSADE 166
>sp|Q15672|TWST1_HUMAN Twist-related protein 1 OS=Homo sapiens
OX=9606 GN=TWIST1 PE=1 SV=1
Length=202
Score = 35.3 bits (79), Expect = 0.95, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
+ ++ R + E++R +N L ++PT S KL K+ L++A +++
Sbjct 100 PQSYEELQTQRVMANVRERQRTQSLNEAFAALRKIIPT--LPSDKLSKIQTLKLAARYI 156
>sp|Q8MIB9|TWST1_PONPY Twist-related protein 1 OS=Pongo pygmaeus
OX=9600 GN=TWIST1 PE=3 SV=1
Length=203
Score = 35.3 bits (79), Expect = 0.96, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
+ ++ R + E++R +N L ++PT S KL K+ L++A +++
Sbjct 101 PQSYEELQTQRVMANVRERQRTQSLNEAFAALRKIIPT--LPSDKLSKIQTLKLAARYI 157
>sp|Q8MIH8|TWST1_CEBCA Twist-related protein 1 OS=Cebus capucinus
OX=9516 GN=TWIST1 PE=3 SV=1
Length=207
Score = 35.3 bits (79), Expect = 0.98, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
+ ++ R + E++R +N L ++PT S KL K+ L++A +++
Sbjct 105 PQSYEELQTQRVMANVRERQRTQSLNEAFAALRKIIPT--LPSDKLSKIQTLKLAARYI 161
>sp|Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis
thaliana OX=3702 GN=BHLH61 PE=2 SV=1
Length=315
Score = 35.7 bits (80), Expect = 1.1, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 12/112 (11%)
Query 55 DDPHGRLEYTEHQGRIKNAR-----EAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKL 109
++ + E + N + + E+RRR ++N + L S+VP K+
Sbjct 125 EESKSFISIGETNKKRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVP----KITKM 180
Query 110 DKLTVLRMAVQHMKTLRGATNPYTEANY---KPTFLSDDELKHLILRAADGF 158
D+ ++L A+ +MK L N E + LS ++R + F
Sbjct 181 DRTSILGDAIDYMKELLDKINKLQEDEQELGSNSHLSTLITNESMVRNSLKF 232
>sp|Q8VZ22|BH103_ARATH Transcription factor bHLH103 OS=Arabidopsis
thaliana OX=3702 GN=BHLH103 PE=1 SV=1
Length=301
Score = 35.7 bits (80), Expect = 1.1, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 37/95 (39%), Gaps = 8/95 (8%)
Query 34 DCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFID 93
D + ++ + +D +E ++ R + +H K R++K+ I
Sbjct 146 DMQACKSLTTCKRASEKSGELED----IESSQPLKRPRLETPSHFPSFKVRKEKLGDRIT 201
Query 94 ELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGA 128
L LV K D +VL A+ ++K L+
Sbjct 202 ALQQLVSPF----GKTDTASVLHDAIDYIKFLQEQ 232
>sp|O80674|BH106_ARATH Transcription factor bHLH106 OS=Arabidopsis
thaliana OX=3702 GN=BHLH106 PE=2 SV=1
Length=253
Score = 35.7 bits (80), Expect = 1.2, Method: Composition-based stats.
Identities = 21/76 (28%), Positives = 43/76 (57%), Gaps = 4/76 (5%)
Query 61 LEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 120
+ T Q R A H + E+RRR+++NS +++L +++ + + K DK T+L VQ
Sbjct 55 IGETMAQDRALAALRNHKEAERRRRERINSHLNKLRNVL----SCNSKTDKATLLAKVVQ 110
Query 121 HMKTLRGATNPYTEAN 136
++ L+ T ++++
Sbjct 111 RVRELKQQTLETSDSD 126
>sp|Q9QZR8|PDZD2_RAT PDZ domain-containing protein 2 OS=Rattus
norvegicus OX=10116 GN=Pdzd2 PE=1 SV=1
Length=2766
Score = 36.0 bits (81), Expect = 1.3, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 51/184 (28%), Gaps = 11/184 (6%)
Query 441 VLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGA-----GKI 495
+ LE PT Q SP + S E R P P R+ A G
Sbjct 1029 RSSPKLEYRVPTDTQSPRSPENHTSPPQKSENLVSRHKPVARISPHYKRSDAEEAPGGTA 1088
Query 496 GRMIAEEIMEIHRIRGSSPSSCGSS--PLNITSTPPPDASSPGGKKILNGGTPDIPSSGL 553
A+++ +++ S +S P +PG + P
Sbjct 1089 NGPCAQDL----KVQASPVKDPVTSRQPGGTAEKELRGNPTPGDSSVPTNCGPASTPCHP 1144
Query 554 LSGQAQENPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAMAVIMSLLEADAGL 613
G ENP + G + + + S D + + + L
Sbjct 1145 NIGLPTENPQGAAPECGPHPGTGWDGSSEHLCSPGKSREVHPDSSETPTVAEQVHQPESL 1204
Query 614 GGPV 617
PV
Sbjct 1205 SQPV 1208
>sp|Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis
thaliana OX=3702 GN=BHLH93 PE=1 SV=1
Length=351
Score = 35.7 bits (80), Expect = 1.3, Method: Composition-based stats.
Identities = 21/106 (20%), Positives = 43/106 (41%), Gaps = 9/106 (8%)
Query 50 MDTDKDDPHGRLEYTEHQGRIKNAR---EAHSQ--IEKRRRDKMNSFIDELASLVPTCNA 104
M++D+ + K+ + + E+RRR ++N + L S+VP
Sbjct 147 MESDQSKSFSVGYCGGETNKKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVP---- 202
Query 105 MSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHL 150
K+D+ ++L A+ +MK L N + + ++ L
Sbjct 203 KISKMDRTSILGDAIDYMKELLDKINKLQDEEQELGNSNNSHHSKL 248
>sp|Q90XB3|OLIG2_CHICK Oligodendrocyte transcription factor 2
OS=Gallus gallus OX=9031 GN=OLIG2 PE=2 SV=1
Length=298
Score = 35.3 bits (79), Expect = 1.4, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 51/128 (40%), Gaps = 3/128 (2%)
Query 8 ISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQ 67
+SS+ P + L S++ +GV K S+ S + + + TE +
Sbjct 44 VSSSTQSDSPPELSAELRSAMSAAGVVVVDKLGFKSSSSSASSASSASSKKDKKQMTEPE 103
Query 68 GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMS-RKLDKLTVLRMAVQHMKTLR 126
+ + E++R +N +D L ++P + S RKL K+ L +A ++ L
Sbjct 104 LQQLRLKINSR--ERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLT 161
Query 127 GATNPYTE 134
+
Sbjct 162 NSLEEMKR 169
>sp|Q9BYE0|HES7_HUMAN Transcription factor HES-7 OS=Homo sapiens
OX=9606 GN=HES7 PE=1 SV=2
Length=225
Score = 34.9 bits (78), Expect = 1.4, Method: Composition-based stats.
Identities = 21/85 (25%), Positives = 34/85 (40%), Gaps = 10/85 (12%)
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMSR----KLDKLTVLRMAVQHMKTLRGATNPYTEA 135
+EKRRRD++N ++EL L+ KL+K +L AV +++ P
Sbjct 20 VEKRRRDRINRSLEELRLLLLERTRDQNLRNPKLEKAEILEFAVGYLRERSRVEPPGVP- 78
Query 136 NYKPTFLSDDELKHLILRAADGFLF 160
+ + L L GF
Sbjct 79 --RSPVQDAEALASCYLS---GFRE 98
>sp|Q5RDA9|FBX42_PONAB F-box only protein 42 OS=Pongo abelii OX=9601
GN=FBXO42 PE=2 SV=1
Length=717
Score = 35.7 bits (80), Expect = 1.5, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 43/136 (32%), Gaps = 19/136 (14%)
Query 431 VEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPS--------GEGGPKRTHPTVP 482
V VV + G P P L + P + + P+ P R+ P
Sbjct 343 PACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPVRSMDEAP 402
Query 483 GIPG--GTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI 540
+ G GT + + SP+ SP+ + P ++ GG +
Sbjct 403 CVNGRWGTLRPRAQRQTPSGSREGSL------SPARGDGSPILNGGSLSPGTAAVGGSSL 456
Query 541 LN---GGTPDIPSSGL 553
+ +P PS+
Sbjct 457 DSPVQAISPSTPSAAE 472
>sp|B9FXT3|UDT1_ORYSJ Transcription factor UDT1 OS=Oryza sativa
subsp. japonica OX=39947 GN=UDT1 PE=2 SV=2
Length=234
Score = 34.9 bits (78), Expect = 1.6, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 7/104 (7%)
Query 71 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATN 130
K + + + E+RRR ++N I L ++VP K+ K L A++H+K L+
Sbjct 60 KEFKSKNLEAERRRRGRLNGNIFALRAVVP----KITKMSKEATLSDAIEHIKNLQNEVL 115
Query 131 PYTEANYKPTFLSDDELKHLILRAADGFLFVVGCD-RGKILFVS 173
+ K ++ F+ +G++ +S
Sbjct 116 ELQRQLGDSP--GEAWEKQCSASCSESFVPTENAHYQGQVELIS 157
>sp|Q9GPH3|ATFC_BOMMO Activating transcription factor of chaperone
OS=Bombyx mori OX=7091 GN=ATFC PE=2 SV=1
Length=236
Score = 34.9 bits (78), Expect = 1.9, Method: Composition-based stats.
Identities = 22/102 (22%), Positives = 39/102 (38%), Gaps = 2/102 (2%)
Query 26 SSLGTSGVDCNRKRKGSSTDYQESMDTDKD-DPHGRLEYTEHQGRIKNAREAHSQIEKRR 84
+S S N + S S TD+D RL+ R +E + R
Sbjct 123 ASPQHSSSSANASPRSSPPPSPRSSSTDEDWSAPSRLKTRPVDDRRSRKKEQNKNAATRY 182
Query 85 RDKMNSFIDELASLVPTCNAMSRKL-DKLTVLRMAVQHMKTL 125
R K + ++ L T +L +K + L+ ++++K L
Sbjct 183 RQKKKAEVEVLLKEEQTLRQRHTELGEKCSDLQREIRYLKAL 224
>sp|Q8MI06|TWST1_GORGO Twist-related protein 1 OS=Gorilla gorilla
gorilla OX=9595 GN=TWIST1 PE=3 SV=1
Length=203
Score = 34.5 bits (77), Expect = 1.9, Method: Composition-based stats.
Identities = 13/53 (25%), Positives = 27/53 (51%), Gaps = 2/53 (4%)
Query 70 IKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
++ R + E++R +N L ++PT S KL K+ L++A +++
Sbjct 107 LQTQRVMANVRERQRTQSLNEPFAALRKIIPT--LPSDKLSKIQTLKLAARYI 157
>sp|Q869W0|HBX2_DICDI Homeobox protein 2 OS=Dictyostelium discoideum
OX=44689 GN=hbx2 PE=2 SV=1
Length=942
Score = 35.3 bits (79), Expect = 1.9, Method: Composition-based stats.
Identities = 21/127 (17%), Positives = 50/127 (39%), Gaps = 2/127 (2%)
Query 9 SSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQG 68
S + S +SP + + G + D ++ S + + + + + EY + Q
Sbjct 414 SPSHSPNLSPSNYNSSPTHYGNNNNDTPKRSHASYKNNNNNNNNNNNSNSSFDEY-QPQQ 472
Query 69 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVL-RMAVQHMKTLRG 127
++ + ++ EK+RR ++ ++ + K DK T+ R+ + +
Sbjct 473 KVSRSNSPNNDKEKKRRTRLKKEQADILKTFFDNDDYPTKDDKETLANRLGMSYCAVTTW 532
Query 128 ATNPYTE 134
+N E
Sbjct 533 FSNKRQE 539
>sp|Q9FHA7|HEC1_ARATH Transcription factor HEC1 OS=Arabidopsis
thaliana OX=3702 GN=HEC1 PE=1 SV=1
Length=241
Score = 34.5 bits (77), Expect = 2.0, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 33/74 (45%), Gaps = 4/74 (5%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMK 123
+ ++ +++ S + RR++++ I L LVP K+D ++L A+ ++K
Sbjct 120 PPKRRNVRISKDPQSVAARHRRERISERIRILQRLVP----GGTKMDTASMLDEAIHYVK 175
Query 124 TLRGATNPYTEANY 137
L+ E
Sbjct 176 FLKKQVQSLEEQAV 189
>sp|Q6PGZ3|MIPT3_DANRE TRAF3-interacting protein 1 OS=Danio rerio
OX=7955 GN=traf3ip1 PE=2 SV=1
Length=629
Score = 35.3 bits (79), Expect = 2.0, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 28/89 (31%), Gaps = 3/89 (3%)
Query 2 ADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSST--DYQESMDTDKDDPHG 59
++R I + P D R + S + + + D D+D
Sbjct 160 REERKGIKESSGSREQKDPDQPKDQESKRDDKDRRRDAERSDKGRERERTKDRDRDKDKS 219
Query 60 RLEYTEHQGRIKNAREAHSQIEKRR-RDK 87
R + + RE EK R RDK
Sbjct 220 RDREKDKTREKEREREKDRNREKERERDK 248
>sp|P9WLK3|Y2083_MYCTU Uncharacterized protein Rv2083 OS=Mycobacterium
tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2083
PE=4 SV=1
Length=314
Score = 34.9 bits (78), Expect = 2.0, Method: Composition-based stats.
Identities = 18/76 (24%), Positives = 28/76 (37%), Gaps = 2/76 (3%)
Query 459 SPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCG 518
+P +M P G P H G+P G G +E R+ ++P+
Sbjct 206 APTKSATMPPPGGASPASAHMGAAGMPMVPPGAMGARGEGSGQEKPVEKRL--TAPAVPN 263
Query 519 SSPLNITSTPPPDASS 534
P+ T PP A +
Sbjct 264 GQPVKGRLTVPPSAPT 279
>sp|Q9NQ33|ASCL3_HUMAN Achaete-scute homolog 3 OS=Homo sapiens
OX=9606 GN=ASCL3 PE=1 SV=3
Length=181
Score = 34.1 bits (76), Expect = 2.0, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query 76 AHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEA 135
++ E++R +N +L +P + ++L K+ LR A++++ L+ P
Sbjct 97 KRNERERQRVKCVNEGYAQLRHHLP-EEYLEKRLSKVETLRAAIKYINYLQSLLYPDKAE 155
Query 136 NYKPTFLSDDELKHLILRAADGFLFV 161
+ A F V
Sbjct 156 TKNNPGKVSSMIATTSHHADPMFRIV 181
>sp|Q9STJ6|BH126_ARATH Transcription factor bHLH126 OS=Arabidopsis
thaliana OX=3702 GN=BHLH126 PE=2 SV=1
Length=221
Score = 34.5 bits (77), Expect = 2.1, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 17/37 (46%), Gaps = 0/37 (0%)
Query 65 EHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 101
E K + H IE++RR +M + L + +P
Sbjct 35 ETDDNKKKKKLLHRDIERQRRQEMATLFATLRTHLPL 71
>sp|Q10R47|ILI3_ORYSJ Transcription factor ILI3 OS=Oryza sativa
subsp. japonica OX=39947 GN=ILI3 PE=1 SV=1
Length=91
Score = 32.6 bits (72), Expect = 2.2, Method: Composition-based stats.
Identities = 10/73 (14%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query 86 DKMNSFIDELASLVP--TCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKP-TFL 142
+++N I +L +L+P + + + + +L+ ++K+L + ++ + + +
Sbjct 17 EEINELISKLQALLPESSRSRGASRSSASKLLKETCSYIKSLHREVDDLSDRLSELMSTM 76
Query 143 SDDELKHLILRAA 155
++ + I+R+
Sbjct 77 DNNSPQAEIIRSL 89
>sp|A2XD15|ILI3_ORYSI Transcription factor ILI3 OS=Oryza sativa
subsp. indica OX=39946 GN=ILI3 PE=3 SV=1
Length=91
Score = 32.6 bits (72), Expect = 2.2, Method: Composition-based stats.
Identities = 10/73 (14%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query 86 DKMNSFIDELASLVP--TCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKP-TFL 142
+++N I +L +L+P + + + + +L+ ++K+L + ++ + + +
Sbjct 17 EEINELISKLQALLPESSRSRGASRSSASKLLKETCSYIKSLHREVDDLSDRLSELMSTM 76
Query 143 SDDELKHLILRAA 155
++ + I+R+
Sbjct 77 DNNSPQAEIIRSL 89
>sp|Q9SND4|HEC2_ARATH Transcription factor HEC2 OS=Arabidopsis
thaliana OX=3702 GN=HEC2 PE=1 SV=1
Length=231
Score = 34.5 bits (77), Expect = 2.3, Method: Composition-based stats.
Identities = 21/132 (16%), Positives = 48/132 (36%), Gaps = 14/132 (11%)
Query 10 STISDFMSPGPTDLL----SSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTE 65
++ +P P+ L + + R+ Q + D +
Sbjct 65 PGLNFRYAPSPSSSLPEKRGGCSDNANMAAMREMIFRIAVMQ-PIHIDPESVK-----PP 118
Query 66 HQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
+ ++ +++ S + RR++++ I L LVP K+D ++L A+ ++K L
Sbjct 119 KRKNVRISKDPQSVAARHRRERISERIRILQRLVP----GGTKMDTASMLDEAIHYVKFL 174
Query 126 RGATNPYTEANY 137
+ E
Sbjct 175 KKQVQSLEEHAV 186
>sp|Q9HFW2|CLA4_EREGS Serine/threonine-protein kinase CLA4 OS=Eremothecium
gossypii (strain ATCC 10895 / CBS 109.51 / FGSC
9923 / NRRL Y-1056) OX=284811 GN=CLA4 PE=3 SV=1
Length=793
Score = 35.3 bits (79), Expect = 2.3, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 44/136 (32%), Gaps = 10/136 (7%)
Query 447 EGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTV-PGIPGGTRAGAGKIGRMIAEEIME 505
+ Q+ ++P + P P V G + G +G + +
Sbjct 262 NSSQASMQQIASTPPYSGGEMIPQRKAPTPPKPVVTSGSAIPSAKGGPNVGVTTSPSVHH 321
Query 506 --IHRIRGSSPSSCGSSPLNITSTPPPDASS-PGGKKILNGGTPDIPSSGLLSGQAQ--- 559
+ SP+ G + + P G + + T + P+ LL+ ++
Sbjct 322 QNTQHGKQQSPTQSGPPKSLPPLHRDEEGPTAPLGNSVSSVATKESPTERLLNNLSETSL 381
Query 560 ---ENPGYPYSDSSSI 572
+ P P + SS+
Sbjct 382 MQKQLPAKPVAPPSSV 397
>sp|O60682|MUSC_HUMAN Musculin OS=Homo sapiens OX=9606 GN=MSC
PE=1 SV=2
Length=206
Score = 34.1 bits (76), Expect = 2.4, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 27/62 (44%), Gaps = 1/62 (2%)
Query 70 IKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGAT 129
++ R A + E+ R ++ L + +P + KL KL LR+A ++ LR
Sbjct 105 KQSQRNAANARERARMRVLSKAFSRLKTSLPWVPPDT-KLSKLDTLRLASSYIAHLRQLL 163
Query 130 NP 131
Sbjct 164 QE 165
>sp|Q9SN74|BH047_ARATH Transcription factor bHLH47 OS=Arabidopsis
thaliana OX=3702 GN=BHLH47 PE=1 SV=1
Length=240
Score = 34.5 bits (77), Expect = 2.4, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 3/77 (4%)
Query 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
R + E+ +R+ +N ELA + S K ++L A + +K + G
Sbjct 28 KRINKAVRERLKREHLNELFIELADTLELNQQNSG---KASILCEATRFLKDVFGQIESL 84
Query 133 TEANYKPTFLSDDELKH 149
+ + S
Sbjct 85 RKEHASLLSESSYVTTE 101
>sp|Q06234|ASCL1_XENLA Achaete-scute homolog 1 OS=Xenopus laevis
OX=8355 GN=ascl1 PE=2 SV=1
Length=199
Score = 34.1 bits (76), Expect = 2.5, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Query 89 NSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTE--ANYKPTFLS--- 143
N L VP A K+ K+ LR AV++++ L+ + + A ++ LS
Sbjct 98 NLGFATLREHVPNGAANK-KMSKVETLRSAVEYIRALQQLLDEHDAVSAAFQSGVLSPTI 156
Query 144 DDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYS 183
H + A + D G +S ++L+++
Sbjct 157 SPNYSHDMNSMAGSPVSSYSSDEGSYDPLSPEEQELLDFT 196
>sp|Q9I9K0|FOG1_XENLA Zinc finger protein ZFPM1 (Fragment) OS=Xenopus
laevis OX=8355 GN=zfpm1 PE=1 SV=1
Length=1061
Score = 35.3 bits (79), Expect = 2.5, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 28/81 (35%), Gaps = 1/81 (1%)
Query 496 GRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGGTPDIPSSGLLS 555
+ + GS + PL TS PP S P + G P +PS LL
Sbjct 948 NSNYKDTTSSSSSVNGSPILTSTPRPLLPTSPAPPSNSLPLAESRREDGLPRVPSQVLLP 1007
Query 556 GQAQENPGYPYSDSSSILGEN 576
G P P S S + N
Sbjct 1008 GDKAMQPPKP-SLISPVPNGN 1027
>sp|P19359|ASCL1_RAT Achaete-scute homolog 1 OS=Rattus norvegicus
OX=10116 GN=Ascl1 PE=2 SV=1
Length=233
Score = 34.5 bits (77), Expect = 2.5, Method: Composition-based stats.
Identities = 12/43 (28%), Positives = 20/43 (47%), Gaps = 1/43 (2%)
Query 89 NSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNP 131
N L VP A K+ K+ LR AV++++ L+ +
Sbjct 132 NLGFATLREHVPNGAANK-KMSKVETLRSAVEYIRALQQLLDE 173
>sp|Q5TGY3|AHDC1_HUMAN Transcription factor Gibbin OS=Homo sapiens
OX=9606 GN=AHDC1 PE=1 SV=1
Length=1603
Score = 35.3 bits (79), Expect = 2.6, Method: Composition-based stats.
Identities = 22/140 (16%), Positives = 37/140 (26%), Gaps = 13/140 (9%)
Query 447 EGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEI 506
+G DP P+ P G+G R + I + + ++
Sbjct 79 KGDDPLPPRAARPVSQARCPTPVGDGSSSRRCWDNGRVNLRPVVQLIDIMKDLTRLSQDL 138
Query 507 HRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGGTPDI------PSSGLLSGQAQE 560
CG P A PG + +P + P E
Sbjct 139 Q--HSGVHLDCGG-----LRLSRPPAPPPGDLQYSFFSSPSLANSIRSPEERATPHAKSE 191
Query 561 NPGYPYSDSSSILGENPHIG 580
P +P + ++P G
Sbjct 192 RPSHPLYEPEPEPRDSPQPG 211
>sp|P56672|OTP_DROME Homeobox protein orthopedia OS=Drosophila
melanogaster OX=7227 GN=otp PE=2 SV=2
Length=409
Score = 34.9 bits (78), Expect = 2.7, Method: Composition-based stats.
Identities = 14/75 (19%), Positives = 25/75 (33%), Gaps = 0/75 (0%)
Query 483 GIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILN 542
GI G+ GAG + + + S + ++T PP+ +S
Sbjct 244 GINMGSALGAGSYQHYGLNALGDSMMYQHSVGGVSCGPSGSPSATTPPNMNSCSSVTPPP 303
Query 543 GGTPDIPSSGLLSGQ 557
S L+G+
Sbjct 304 LSAQPNSSQNELNGE 318
>sp|O95602|RPA1_HUMAN DNA-directed RNA polymerase I subunit RPA1
OS=Homo sapiens OX=9606 GN=POLR1A PE=1 SV=2
Length=1720
Score = 34.9 bits (78), Expect = 2.8, Method: Composition-based stats.
Identities = 15/119 (13%), Positives = 42/119 (35%), Gaps = 8/119 (7%)
Query 70 IKNAREAHSQIEKRRRDKM------NSFIDELASLV--PTCNAMSRKLDKLTVLRMAVQH 121
++ R H + ++ +++ L +L+ P S++ + VQ
Sbjct 1445 MQEERNPHREGARKTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMERRVQA 1504
Query 122 MKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL 180
++ + + Y + + L+ D VV G +++ ++ + + L
Sbjct 1505 VREIHPFIDDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHGAVIYATKGITRCL 1563
>sp|Q5RB69|CCD86_PONAB Coiled-coil domain-containing protein 86
OS=Pongo abelii OX=9601 GN=CCDC86 PE=2 SV=1
Length=360
Score = 34.5 bits (77), Expect = 2.8, Method: Composition-based stats.
Identities = 29/132 (22%), Positives = 46/132 (35%), Gaps = 18/132 (14%)
Query 452 TFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIP-----GGTRAGAGK----IGRMIAEE 502
+ P+ T P S S+ +G G P+R T PG P G + G+ G ++
Sbjct 37 SNPEETREPGSPPSVQRAGLGSPERPPKTSPGSPRLQQGSGLESPQGQPEPGAGSPQRQQ 96
Query 503 IMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGGTPDIPSSGLLSGQAQENP 562
+ + S SP + P P P + G +S L + + P
Sbjct 97 DLHLE----SPQRQPEYSPESPRCQPKPSEEVPKCSQ-DQGVL----ASELAQSKEELTP 147
Query 563 GYPYSDSSSILG 574
G P + G
Sbjct 148 GAPQHQLPPVPG 159
>sp|O88940|MUSC_MOUSE Musculin OS=Mus musculus OX=10090 GN=Msc
PE=1 SV=1
Length=201
Score = 34.1 bits (76), Expect = 2.9, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query 70 IKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGAT 129
++ R A + E+ R ++ L + +P + KL KL LR+A ++ LR
Sbjct 100 KQSQRNAANARERARMRVLSKAFSRLKTSLPWVPPDT-KLSKLDTLRLASSYIAHLRQLL 158
Query 130 NPYTEANY 137
+
Sbjct 159 QEDRYEDS 166
>sp|O35254|GORS1_RAT Golgi reassembly-stacking protein 1 OS=Rattus
norvegicus OX=10116 GN=Gorasp1 PE=1 SV=4
Length=451
Score = 34.5 bits (77), Expect = 3.0, Method: Composition-based stats.
Identities = 32/140 (23%), Positives = 48/140 (34%), Gaps = 18/140 (13%)
Query 426 PWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIP 485
P+T +YIV ++ ++ E D + + M+ + E + V P
Sbjct 130 PYT---DYIVGSDQIL----QESEDFFTLIESHEGKPLKLMVYNSESD---SCREVTVTP 179
Query 486 GGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGGT 545
G G +G I +HRI S P S+P A +P G
Sbjct 180 NAAWGGEGSLGCGIG--YGYLHRIPTQPSSQYKKPPS--ASSPGTPAKTPQPNAFPLGAP 235
Query 546 PDIP----SSGLLSGQAQEN 561
P P SSG G Q +
Sbjct 236 PPWPIPQDSSGPELGSRQSD 255
>sp|P50553|ASCL1_HUMAN Achaete-scute homolog 1 OS=Homo sapiens
OX=9606 GN=ASCL1 PE=1 SV=2
Length=236
Score = 34.1 bits (76), Expect = 3.1, Method: Composition-based stats.
Identities = 12/43 (28%), Positives = 20/43 (47%), Gaps = 1/43 (2%)
Query 89 NSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNP 131
N L VP A K+ K+ LR AV++++ L+ +
Sbjct 135 NLGFATLREHVPNGAANK-KMSKVETLRSAVEYIRALQQLLDE 176
>sp|A6NNC1|P12LL_HUMAN Putative POM121-like protein 1-like OS=Homo
sapiens OX=9606 PE=5 SV=3
Length=897
Score = 34.9 bits (78), Expect = 3.2, Method: Composition-based stats.
Identities = 16/78 (21%), Positives = 30/78 (38%), Gaps = 5/78 (6%)
Query 506 IHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGGTP-----DIPSSGLLSGQAQE 560
H + + + G P++ T P + L P ++PS+ +SG+
Sbjct 491 SHTLSSLATGASGGPPVSKAPTMDAQQDRPKSQDCLGLVAPLASAAEVPSTAPVSGKKHR 550
Query 561 NPGYPYSDSSSILGENPH 578
PG +S S + + H
Sbjct 551 PPGPLFSSSDPLPATSSH 568
>sp|Q8CEE6|PASK_MOUSE PAS domain-containing serine/threonine-protein
kinase OS=Mus musculus OX=10090 GN=Pask PE=1 SV=3
Length=1383
Score = 34.9 bits (78), Expect = 3.4, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 50/189 (26%), Gaps = 14/189 (7%)
Query 211 SDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCS 270
S++ P + A+ ++ L S C+ + + S +
Sbjct 17 SESPPVQEGPAAQATFEPSKPLSIAHKHLSRKNGLSRLCQSRMALSEDRWSSYCLSSLAA 76
Query 271 KKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVN 330
+ K +H + PT G C + G
Sbjct 77 QNICTSK----LHCAAAPEYADPT---------AGPLGSTSCCSLLRGLASGCSGSLLST 123
Query 331 GEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHR 390
+ V D +A ++L Y +L+G ++F + D +
Sbjct 124 PVCNPNKAVFTVDAKTTEILVAND-KACSLLGYSSHDLIGQKLAQFFLKSDSEVVEALSE 182
Query 391 QVLQTREKI 399
+ ++
Sbjct 183 EHVEADGHA 191
>sp|Q8MI03|TWST1_PANTR Twist-related protein 1 OS=Pan troglodytes
OX=9598 GN=TWIST1 PE=3 SV=1
Length=201
Score = 33.7 bits (75), Expect = 3.4, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query 64 TEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHM 122
+ ++ R + E++R +N L ++PT S KL K+ L++A +++
Sbjct 101 PQSYEELQTQRVMANVRERQRTQSLNEAFAALPKIIPT--LPSDKLSKIQTLKLAARYI 157
>sp|Q9LXG5|PRE2_ARATH Transcription factor PRE2 OS=Arabidopsis
thaliana OX=3702 GN=PRE2 PE=1 SV=1
Length=94
Score = 32.2 bits (71), Expect = 3.4, Method: Composition-based stats.
Identities = 8/52 (15%), Positives = 20/52 (38%), Gaps = 2/52 (4%)
Query 86 DKMNSFIDELASLVPTCNAM--SRKLDKLTVLRMAVQHMKTLRGATNPYTEA 135
D++ I +L +P S + VL+ +++ L + ++
Sbjct 19 DQITDLISKLRQSIPEIRQNRRSNTVSASKVLQETCNYIRNLNKEADDLSDR 70
>sp|P9WLK2|Y2083_MYCTO Uncharacterized protein MT2145 OS=Mycobacterium
tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2145
PE=4 SV=1
Length=314
Score = 34.1 bits (76), Expect = 3.4, Method: Composition-based stats.
Identities = 18/76 (24%), Positives = 28/76 (37%), Gaps = 2/76 (3%)
Query 459 SPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCG 518
+P +M P G P H G+P G G +E R+ ++P+
Sbjct 206 APTKSATMPPPGGASPASAHMGAAGMPMVPPGAMGARGEGSGQEKPVEKRV--TAPAVPN 263
Query 519 SSPLNITSTPPPDASS 534
P+ T PP A +
Sbjct 264 GQPVKGRLTVPPSAPT 279
>sp|Q0VG99|MESP2_HUMAN Mesoderm posterior protein 2 OS=Homo sapiens
OX=9606 GN=MESP2 PE=1 SV=2
Length=397
Score = 34.5 bits (77), Expect = 3.5, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (2%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK-LDKLTVLRMAVQHMKTLRGATNPY 132
R++ S+ EK R + + EL +P A + + L K+ LR+A++++ L
Sbjct 83 RQSASEREKLRMRTLARALHELRRFLPPSLAPAGQSLTKIETLRLAIRYIGHLSAVLGLS 142
Query 133 TEA 135
E+
Sbjct 143 EES 145
>sp|Q99929|ASCL2_HUMAN Achaete-scute homolog 2 OS=Homo sapiens
OX=9606 GN=ASCL2 PE=1 SV=2
Length=193
Score = 33.7 bits (75), Expect = 3.5, Method: Composition-based stats.
Identities = 14/38 (37%), Positives = 21/38 (55%), Gaps = 1/38 (3%)
Query 89 NSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
N L VP A S+KL K+ LR AV++++ L+
Sbjct 67 NLGFQALRQHVPHGGA-SKKLSKVETLRSAVEYIRALQ 103
>sp|Q2EGB9|ASCL2_BOVIN Achaete-scute homolog 2 OS=Bos taurus OX=9913
GN=ASCL2 PE=2 SV=1
Length=193
Score = 33.3 bits (74), Expect = 3.9, Method: Composition-based stats.
Identities = 14/38 (37%), Positives = 21/38 (55%), Gaps = 1/38 (3%)
Query 89 NSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
N L VP A S+KL K+ LR AV++++ L+
Sbjct 67 NLGFQALRQHVPHGGA-SKKLSKVETLRSAVEYIRALQ 103
>sp|Q02067|ASCL1_MOUSE Achaete-scute homolog 1 OS=Mus musculus
OX=10090 GN=Ascl1 PE=1 SV=2
Length=231
Score = 33.7 bits (75), Expect = 4.1, Method: Composition-based stats.
Identities = 12/43 (28%), Positives = 20/43 (47%), Gaps = 1/43 (2%)
Query 89 NSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNP 131
N L VP A K+ K+ LR AV++++ L+ +
Sbjct 130 NLGFATLREHVPNGAANK-KMSKVETLRSAVEYIRALQQLLDE 171
>sp|Q6A0A9|F120A_MOUSE Constitutive coactivator of PPAR-gamma-like
protein 1 OS=Mus musculus OX=10090 GN=FAM120A PE=1 SV=2
Length=1112
Score = 34.5 bits (77), Expect = 4.3, Method: Composition-based stats.
Identities = 26/174 (15%), Positives = 48/174 (28%), Gaps = 26/174 (15%)
Query 414 ITLRSRWFSF--MNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGE 471
+TL + + N ++ +T + E P + SP+ +DS G
Sbjct 401 LTLDTSGKNLTEQNSYSNIPHE--GKHT----PLYERSSPINLAQSGSPNHVDSAYFPGS 454
Query 472 GGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEI---------MEIHRIRGSSPSSCG---- 518
+ G KIG + ++ GSS +S G
Sbjct 455 STSSSSDNDEGGGGATNHISGNKIGWEKTGSHAEPLARGDPGDQVKVEGSSTASSGSQLA 514
Query 519 -SSPLNITSTPPPDA----SSPGGKKILNGGTPDIPSSGLLSGQAQENPGYPYS 567
++ + P + I P + L + + G Y
Sbjct 515 EGKGSHMGTVQPIPCLLSMPTRNHMDITTPPLPPVAPEVLRVAEHRHKKGLMYP 568
>sp|O35885|ASCL2_MOUSE Achaete-scute homolog 2 OS=Mus musculus
OX=10090 GN=Ascl2 PE=1 SV=2
Length=263
Score = 33.7 bits (75), Expect = 4.7, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (3%)
Query 89 NSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
N L VP A KL K+ LR AV++++ L+
Sbjct 135 NLGFQALRQHVPHGGANK-KLSKVETLRSAVEYIRALQ 171
>sp|Q9SFZ3|BH110_ARATH Transcription factor bHLH110 OS=Arabidopsis
thaliana OX=3702 GN=BHLH110 PE=2 SV=2
Length=453
Score = 34.1 bits (76), Expect = 4.9, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 48/158 (30%), Gaps = 13/158 (8%)
Query 9 SSTISDF-MSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGR-----LE 62
+ IS MS G S T E + G+ +
Sbjct 250 AQEISSLGMSRGSLPSFGLPFHHHLQQTLPHLSSSPTHQMEMFSNEPQTSEGKRHNFLMA 309
Query 63 YTEHQGRIKNAREAHSQIE---KRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAV 119
+ K R K R++K+ I L LV K D +VL A+
Sbjct 310 TKAGENASKKPRVESRSSCPPFKVRKEKLGDRIAALQQLVSPF----GKTDTASVLMEAI 365
Query 120 QHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADG 157
++K L+ + + + + L+ ++ +G
Sbjct 366 GYIKFLQSQIETLSVPYMRASRNRPGKASQLVSQSQEG 403
>sp|W3X7S0|PFMAF_PESFW Transcription factor PfmaF OS=Pestalotiopsis
fici (strain W106-1 / CGMCC3.15140) OX=1229662 GN=PfmaF
PE=3 SV=1
Length=456
Score = 33.7 bits (75), Expect = 5.1, Method: Composition-based stats.
Identities = 23/165 (14%), Positives = 46/165 (28%), Gaps = 17/165 (10%)
Query 459 SPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCG 518
S + D+ + +PG G G + M+ + + +
Sbjct 174 SENLADTNPWQSQNPSSSFSQMLPGSSGSMIHGRSQSTDMMISLVAANFQDTNAQAGPSH 233
Query 519 SSPLNITSTPPPDASSPGGKKILNGGTPDIPSSGLLSG------QAQENPGYPYSDSSSI 572
PL + P G+ + P + LS + NP + S
Sbjct 234 GPPLG---QMAGPSHGPLGQMAVPLHGPPLGQMAGLSHGPLGQMTSPPNPAHARHHSDPA 290
Query 573 LGENPHIGIDMIDNDQG--------SSSPSNDEAAMAVIMSLLEA 609
+G + + Q ++S + M +L +A
Sbjct 291 IGTGHVLSCNFDCTHQSLQRLNFMLATSSWPSDMLMTANENLCDA 335
>sp|B4KND9|EAF_DROMO Ell-associated factor Eaf OS=Drosophila mojavensis
OX=7230 GN=Eaf PE=3 SV=2
Length=518
Score = 33.7 bits (75), Expect = 5.2, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 39/120 (33%), Gaps = 7/120 (6%)
Query 464 DSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLN 523
S++P+ P + P +P G AG G G + M RI + S GS N
Sbjct 128 PSLMPATNAAPMSSGPNGVPMPSGAMAGTGS-GPKLENSTM---RITSKTKVSTGSRRNN 183
Query 524 ITSTPPPDASSPGGKKILNGGTPDIPSSGLLSGQAQENPGYPYSDSSSILGENPHIGIDM 583
I P ++ + P S P S ++ ++ G+
Sbjct 184 IIDFKPRNSPMQQSSPSRPVASHRSPQSAPAWHANNAQQTLP---SIPMIMDDDDFGLSA 240
>sp|Q8BKT2|HES7_MOUSE Transcription factor HES-7 OS=Mus musculus
OX=10090 GN=Hes7 PE=1 SV=1
Length=225
Score = 33.3 bits (74), Expect = 5.2, Method: Composition-based stats.
Identities = 17/61 (28%), Positives = 29/61 (48%), Gaps = 4/61 (7%)
Query 80 IEKRRRDKMNSFIDELASLVPTCNAMSR----KLDKLTVLRMAVQHMKTLRGATNPYTEA 135
+EKRRRD++N ++EL L+ KL+K +L AV +++ P
Sbjct 20 VEKRRRDRINRSLEELRLLLLERTRDQNLRNPKLEKAEILEFAVGYLRERSRVEPPGVPR 79
Query 136 N 136
+
Sbjct 80 S 80
>sp|Q9VWC6|ZELDA_DROME Transcription factor Zelda OS=Drosophila
melanogaster OX=7227 GN=zld PE=1 SV=1
Length=1596
Score = 34.1 bits (76), Expect = 5.8, Method: Composition-based stats.
Identities = 24/105 (23%), Positives = 30/105 (29%), Gaps = 12/105 (11%)
Query 476 RTHPTVPGIPGGTRAGAG------KIGRMIAEE---IMEIHRIRGSSPSSCGS---SPLN 523
+ PG PGG AG K G + E I + G SP SP
Sbjct 260 SSSGQTPGSPGGAAGSAGCKLQCKKCGILTTNESELQEHIANVHGESPYGSSGYASSPYI 319
Query 524 ITSTPPPDASSPGGKKILNGGTPDIPSSGLLSGQAQENPGYPYSD 568
P P G G D+ S ++ Q D
Sbjct 320 KEEMPTPQPPGVGSATANPGELLDLDSQKMVYHQQLLQQQQQQHD 364
>sp|P09775|AST8_DROME Achaete-scute complex protein T8 OS=Drosophila
melanogaster OX=7227 GN=ase PE=2 SV=2
Length=486
Score = 33.7 bits (75), Expect = 6.3, Method: Composition-based stats.
Identities = 13/41 (32%), Positives = 23/41 (56%), Gaps = 0/41 (0%)
Query 85 RDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL 125
R+K+ + E S+KL K+ LRMAV+++++L
Sbjct 183 REKIPEEVSEAFEAQGAGRGASKKLSKVETLRMAVEYIRSL 223
>sp|P19360|ASCL2_RAT Achaete-scute homolog 2 OS=Rattus norvegicus
OX=10116 GN=Ascl2 PE=1 SV=1
Length=260
Score = 33.3 bits (74), Expect = 6.3, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (3%)
Query 89 NSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
N L VP A KL K+ LR AV++++ L+
Sbjct 135 NLGFQALRQHVPHGGANK-KLSKVETLRSAVEYIRALQ 171
>sp|A0A0U2WFX7|RIA1_USTMD Regulator of itaconic acid biosynthesis
OS=Ustilago maydis OX=5270 GN=RIA1 PE=3 SV=1
Length=381
Score = 33.3 bits (74), Expect = 6.4, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 30/61 (49%), Gaps = 1/61 (2%)
Query 74 REAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYT 133
+ HS +EK RR +++ L +++ + ++ + K +L+ A ++ LR + T
Sbjct 92 KRKHSDVEKDRRRSISNGFAVLQNVL-HNESNAKPISKSILLQQACDEIRELRKKLDAST 150
Query 134 E 134
Sbjct 151 T 151
>sp|Q8BW74|HLF_MOUSE Hepatic leukemia factor OS=Mus musculus OX=10090
GN=Hlf PE=2 SV=1
Length=295
Score = 33.0 bits (73), Expect = 8.3, Method: Composition-based stats.
Identities = 17/75 (23%), Positives = 26/75 (35%), Gaps = 1/75 (1%)
Query 12 ISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIK 71
+ P P DL SS+ + RKRK S + + K + +
Sbjct 171 VPVGYEPDPADLALSSIPGQEMFDPRKRKFSEEELKPQPMIKKARK-VFIPDDLKDDKYW 229
Query 72 NAREAHSQIEKRRRD 86
R ++ KR RD
Sbjct 230 ARRRKNNMAAKRSRD 244
>sp|Q16534|HLF_HUMAN Hepatic leukemia factor OS=Homo sapiens OX=9606
GN=HLF PE=1 SV=1
Length=295
Score = 33.0 bits (73), Expect = 8.3, Method: Composition-based stats.
Identities = 17/75 (23%), Positives = 26/75 (35%), Gaps = 1/75 (1%)
Query 12 ISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIK 71
+ P P DL SS+ + RKRK S + + K + +
Sbjct 171 VPVGYEPDPADLALSSIPGQEMFDPRKRKFSEEELKPQPMIKKARK-VFIPDDLKDDKYW 229
Query 72 NAREAHSQIEKRRRD 86
R ++ KR RD
Sbjct 230 ARRRKNNMAAKRSRD 244
Lambda K H a alpha
0.318 0.115 0.277 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0352 0.140 1.90 42.6 43.6
Effective search space used: 68412876260
Database: uniprot_sprot.fasta
Posted date: Oct 6, 2024 4:14 PM
Number of letters in database: 207,235,166
Number of sequences in database: 572,214
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40