[Multiple Alignment(many alignments)] [Alignment Bar(many alignments)] [show plain BLAST file]
BLASTP 2.11.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: unitmol_20240306.fasta
           823,561 sequences; 235,957,221 total letters



Query= YP_009724393.1 membrane glycoprotein [Severe acute respiratory
syndrome coronavirus 2]

Length=222
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

7vgr_E A Membrane protein                                             403     2e-143
7vgr_F B Membrane protein                                             403     2e-143
7vgs_A A Membrane protein                                             399     6e-142
7vgs_D B Membrane protein                                             399     6e-142
8ctk_A A Membrane protein                                             384     4e-136
8ctk_B B Membrane protein                                             384     4e-136
7y9b_A A Membrane protein                                             167     5e-51 
7y9b_C C Membrane protein                                             167     5e-51 
7y9b_D D Membrane protein                                             167     5e-51 
7y9b_B B Membrane protein                                             167     5e-51 
7y96_B B Green fluorescent protein,Membrane protein                   79.0    5e-16 
7y96_A A Green fluorescent protein,Membrane protein                   75.1    1e-14 
8cme_F F Membrane protein                                             34.7    0.035 
8cme_I I Membrane protein                                             34.7    0.035 
8cme_C C Membrane protein                                             34.7    0.035 


>7vgr_E A Membrane protein
Length=246 Score = 403 bits (1035), Expect = 2e-143, Method: Compositional matrix adjust. Identities = 198/198 (100%), Positives = 198/198 (100%), Gaps = 0/198 (0%) Query 9 TVEELKKLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLA 68 TVEELKKLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLA Sbjct 33 TVEELKKLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLA 92 Query 69 AVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTI 128 AVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTI Sbjct 93 AVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTI 152 Query 129 LTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVA 188 LTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVA Sbjct 153 LTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVA 212 Query 189 GDSGFAAYSRYRIGNYKL 206 GDSGFAAYSRYRIGNYKL Sbjct 213 GDSGFAAYSRYRIGNYKL 230
>7vgr_F B Membrane protein
Length=246 Score = 403 bits (1035), Expect = 2e-143, Method: Compositional matrix adjust. Identities = 198/198 (100%), Positives = 198/198 (100%), Gaps = 0/198 (0%) Query 9 TVEELKKLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLA 68 TVEELKKLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLA Sbjct 33 TVEELKKLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLA 92 Query 69 AVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTI 128 AVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTI Sbjct 93 AVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTI 152 Query 129 LTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVA 188 LTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVA Sbjct 153 LTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVA 212 Query 189 GDSGFAAYSRYRIGNYKL 206 GDSGFAAYSRYRIGNYKL Sbjct 213 GDSGFAAYSRYRIGNYKL 230
>7vgs_A A Membrane protein
Length=246 Score = 399 bits (1025), Expect = 6e-142, Method: Compositional matrix adjust. Identities = 196/196 (100%), Positives = 196/196 (100%), Gaps = 0/196 (0%) Query 9 TVEELKKLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLA 68 TVEELKKLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLA Sbjct 33 TVEELKKLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLA 92 Query 69 AVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTI 128 AVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTI Sbjct 93 AVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTI 152 Query 129 LTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVA 188 LTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVA Sbjct 153 LTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVA 212 Query 189 GDSGFAAYSRYRIGNY 204 GDSGFAAYSRYRIGNY Sbjct 213 GDSGFAAYSRYRIGNY 228
>7vgs_D B Membrane protein
Length=246 Score = 399 bits (1025), Expect = 6e-142, Method: Compositional matrix adjust. Identities = 196/196 (100%), Positives = 196/196 (100%), Gaps = 0/196 (0%) Query 9 TVEELKKLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLA 68 TVEELKKLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLA Sbjct 33 TVEELKKLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLA 92 Query 69 AVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTI 128 AVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTI Sbjct 93 AVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTI 152 Query 129 LTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVA 188 LTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVA Sbjct 153 LTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVA 212 Query 189 GDSGFAAYSRYRIGNY 204 GDSGFAAYSRYRIGNY Sbjct 213 GDSGFAAYSRYRIGNY 228
>8ctk_A A Membrane protein
Length=231 Score = 384 bits (986), Expect = 4e-136, Method: Compositional matrix adjust. Identities = 188/188 (100%), Positives = 188/188 (100%), Gaps = 0/188 (0%) Query 17 LEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLAAVYRINWI 76 LEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLAAVYRINWI Sbjct 17 LEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLAAVYRINWI 76 Query 77 TGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTILTRPLLES 136 TGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTILTRPLLES Sbjct 77 TGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTILTRPLLES 136 Query 137 ELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAY 196 ELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAY Sbjct 137 ELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAY 196 Query 197 SRYRIGNY 204 SRYRIGNY Sbjct 197 SRYRIGNY 204
>8ctk_B B Membrane protein
Length=231 Score = 384 bits (986), Expect = 4e-136, Method: Compositional matrix adjust. Identities = 188/188 (100%), Positives = 188/188 (100%), Gaps = 0/188 (0%) Query 17 LEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLAAVYRINWI 76 LEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLAAVYRINWI Sbjct 17 LEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLAAVYRINWI 76 Query 77 TGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTILTRPLLES 136 TGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTILTRPLLES Sbjct 77 TGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTILTRPLLES 136 Query 137 ELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAY 196 ELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAY Sbjct 137 ELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAY 196 Query 197 SRYRIGNY 204 SRYRIGNY Sbjct 197 SRYRIGNY 204
>7y9b_A A Membrane protein
Length=220 Score = 167 bits (424), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 84/188 (45%), Positives = 115/188 (61%), Gaps = 6/188 (3%) Query 15 KLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLAAVYRIN 74 +L++ WN +FL +LQ+ Y +R+ F+Y+IK+ LWLLWP ++A + AVY I+ Sbjct 15 RLVKDWNFTWSVVFLLITIVLQYGYPSRSMFVYVIKMFVLWLLWPASMALSIFCAVYPID 74 Query 75 ---WITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTILTR 131 I GI A +C MW+SYF+ S RLF RT S WSFNPE+N LLNVP+ GT + R Sbjct 75 LASQIISGILAATSCA---MWISYFVQSIRLFMRTGSWWSFNPESNCLLNVPIGGTTVVR 131 Query 132 PLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDS 191 PL+E + AV+ G+L++AG H G CD + LP E+TVA L K+ Q +S Sbjct 132 PLVEDSTSVTAVVTDGYLKMAGMHFGACDFQRLPSEVTVAKPNVLIALKMIKRQAYGTNS 191 Query 192 GFAAYSRY 199 G A Y RY Sbjct 192 GVAIYHRY 199
>7y9b_C C Membrane protein
Length=220 Score = 167 bits (424), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 84/188 (45%), Positives = 115/188 (61%), Gaps = 6/188 (3%) Query 15 KLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLAAVYRIN 74 +L++ WN +FL +LQ+ Y +R+ F+Y+IK+ LWLLWP ++A + AVY I+ Sbjct 15 RLVKDWNFTWSVVFLLITIVLQYGYPSRSMFVYVIKMFVLWLLWPASMALSIFCAVYPID 74 Query 75 ---WITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTILTR 131 I GI A +C MW+SYF+ S RLF RT S WSFNPE+N LLNVP+ GT + R Sbjct 75 LASQIISGILAATSCA---MWISYFVQSIRLFMRTGSWWSFNPESNCLLNVPIGGTTVVR 131 Query 132 PLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDS 191 PL+E + AV+ G+L++AG H G CD + LP E+TVA L K+ Q +S Sbjct 132 PLVEDSTSVTAVVTDGYLKMAGMHFGACDFQRLPSEVTVAKPNVLIALKMIKRQAYGTNS 191 Query 192 GFAAYSRY 199 G A Y RY Sbjct 192 GVAIYHRY 199
>7y9b_D D Membrane protein
Length=220 Score = 167 bits (424), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 84/188 (45%), Positives = 115/188 (61%), Gaps = 6/188 (3%) Query 15 KLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLAAVYRIN 74 +L++ WN +FL +LQ+ Y +R+ F+Y+IK+ LWLLWP ++A + AVY I+ Sbjct 15 RLVKDWNFTWSVVFLLITIVLQYGYPSRSMFVYVIKMFVLWLLWPASMALSIFCAVYPID 74 Query 75 ---WITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTILTR 131 I GI A +C MW+SYF+ S RLF RT S WSFNPE+N LLNVP+ GT + R Sbjct 75 LASQIISGILAATSCA---MWISYFVQSIRLFMRTGSWWSFNPESNCLLNVPIGGTTVVR 131 Query 132 PLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDS 191 PL+E + AV+ G+L++AG H G CD + LP E+TVA L K+ Q +S Sbjct 132 PLVEDSTSVTAVVTDGYLKMAGMHFGACDFQRLPSEVTVAKPNVLIALKMIKRQAYGTNS 191 Query 192 GFAAYSRY 199 G A Y RY Sbjct 192 GVAIYHRY 199
>7y9b_B B Membrane protein
Length=220 Score = 167 bits (424), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 84/188 (45%), Positives = 115/188 (61%), Gaps = 6/188 (3%) Query 15 KLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLAAVYRIN 74 +L++ WN +FL +LQ+ Y +R+ F+Y+IK+ LWLLWP ++A + AVY I+ Sbjct 15 RLVKDWNFTWSVVFLLITIVLQYGYPSRSMFVYVIKMFVLWLLWPASMALSIFCAVYPID 74 Query 75 ---WITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTILTR 131 I GI A +C MW+SYF+ S RLF RT S WSFNPE+N LLNVP+ GT + R Sbjct 75 LASQIISGILAATSCA---MWISYFVQSIRLFMRTGSWWSFNPESNCLLNVPIGGTTVVR 131 Query 132 PLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDS 191 PL+E + AV+ G+L++AG H G CD + LP E+TVA L K+ Q +S Sbjct 132 PLVEDSTSVTAVVTDGYLKMAGMHFGACDFQRLPSEVTVAKPNVLIALKMIKRQAYGTNS 191 Query 192 GFAAYSRY 199 G A Y RY Sbjct 192 GVAIYHRY 199
>7y96_B B Green fluorescent protein,Membrane protein
Length=344 Score = 79.0 bits (193), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 0/86 (0%) Query 115 ETNILLNVPLHGTILTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSR 174 E+N LLNVP+ GT + RPL+E + AV+ G+L++AG H G CD + LP E+TVA Sbjct 147 ESNCLLNVPIGGTTVVRPLVEDSTSVTAVVTDGYLKMAGMHFGACDFQRLPSEVTVAKPN 206 Query 175 TLSYYKLGASQRVAGDSGFAAYSRYR 200 L K+ Q +SG A Y RY+ Sbjct 207 VLIALKMIKRQAYGTNSGVAIYHRYK 232
>7y96_A A Green fluorescent protein,Membrane protein
Length=344 Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 50/84 (60%), Gaps = 0/84 (0%) Query 115 ETNILLNVPLHGTILTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSR 174 E+N LLNVP+ GT + RPL+E + AV+ G+L++AG H G CD + LP E+TVA Sbjct 147 ESNCLLNVPIGGTTVVRPLVEDSTSVTAVVTDGYLKMAGMHFGACDFQRLPSEVTVAKPN 206 Query 175 TLSYYKLGASQRVAGDSGFAAYSR 198 L K+ Q +SG A Y R Sbjct 207 VLIALKMIKRQAYGTNSGVAIYHR 230
>8cme_F F Membrane protein
Length=15 Score = 34.7 bits (78), Expect = 0.035, Method: Composition-based stats. Identities = 15/15 (100%), Positives = 15/15 (100%), Gaps = 0/15 (0%) Query 176 LSYYKLGASQRVAGD 190 LSYYKLGASQRVAGD Sbjct 1 LSYYKLGASQRVAGD 15
>8cme_I I Membrane protein
Length=15 Score = 34.7 bits (78), Expect = 0.035, Method: Composition-based stats. Identities = 15/15 (100%), Positives = 15/15 (100%), Gaps = 0/15 (0%) Query 176 LSYYKLGASQRVAGD 190 LSYYKLGASQRVAGD Sbjct 1 LSYYKLGASQRVAGD 15
>8cme_C C Membrane protein
Length=15 Score = 34.7 bits (78), Expect = 0.035, Method: Composition-based stats. Identities = 15/15 (100%), Positives = 15/15 (100%), Gaps = 0/15 (0%) Query 176 LSYYKLGASQRVAGD 190 LSYYKLGASQRVAGD Sbjct 1 LSYYKLGASQRVAGD 15 Lambda K H a alpha 0.328 0.141 0.444 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 15343696836 Database: unitmol_20240306.fasta Posted date: Mar 7, 2024 11:58 AM Number of letters in database: 235,957,221 Number of sequences in database: 823,561 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40