[Multiple Alignment(many alignments)]
[Alignment Bar(many alignments)]
[show plain BLAST file]
BLASTP 2.11.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: unitmol_20240403.fasta
829,018 sequences; 237,935,689 total letters
Query= sp|P59636|ORF9B_SARS ORF9b protein OS=Severe acute respiratory
syndrome coronavirus OX=694009 GN=9b PE=1 SV=1
Length=98
Score E
Sequences producing significant alignments: (Bits) Value
2cme_B B HYPOTHETICAL PROTEIN 5 147 5e-47
2cme_A A HYPOTHETICAL PROTEIN 5 145 6e-46
2cme_G G HYPOTHETICAL PROTEIN 5 143 4e-45
2cme_E E HYPOTHETICAL PROTEIN 5 143 4e-45
2cme_F F HYPOTHETICAL PROTEIN 5 141 2e-44
2cme_D D HYPOTHETICAL PROTEIN 5 141 2e-44
2cme_H H HYPOTHETICAL PROTEIN 5 141 2e-44
2cme_C C HYPOTHETICAL PROTEIN 5 141 2e-44
7ye8_B B ORF9b protein 138 5e-43
7ye8_A A ORF9b protein 122 1e-36
7ye7_B D ORF9b protein 122 1e-36
6z4u_A A Protein 9b 120 5e-36
7ye8_D D ORF9b protein 120 6e-36
7ye7_D B ORF9b protein 117 1e-34
6z4u_B B Protein 9b 117 1e-34
7ye7_A C ORF9b protein 117 1e-34
7ye8_C C ORF9b protein 115 9e-34
7ye7_C A ORF9b protein 113 7e-33
7kdt_B B ORF9b protein 60.1 4e-12
7dhg_B B ORF9b protein 54.7 5e-10
4lxs_A A Protein toll 28.9 8.4
4lxr_A A Protein toll 28.9 8.8
>2cme_B B HYPOTHETICAL PROTEIN 5
Length=79
Score = 147 bits (372), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 78/90 (87%), Positives = 78/90 (87%), Gaps = 11/90 (12%)
Query 9 VPPALHLVDPQIQLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEAR 68
VPPALHLVDPQIQLTITR ADPKVYPIILRLGS LSLSMARRNLDSLEAR
Sbjct 1 VPPALHLVDPQIQLTITR-----------ADPKVYPIILRLGSNLSLSMARRNLDSLEAR 49
Query 69 AFQSTPIVVQMTKLATTEELPDEFVVVTAK 98
AFQSTPIVVQMTKLATTEELPDEFVVVTAK
Sbjct 50 AFQSTPIVVQMTKLATTEELPDEFVVVTAK 79
>2cme_A A HYPOTHETICAL PROTEIN 5
Length=78
Score = 145 bits (366), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 77/90 (86%), Positives = 77/90 (86%), Gaps = 12/90 (13%)
Query 9 VPPALHLVDPQIQLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEAR 68
VPPALHLVDPQIQLTIT ADPKVYPIILRLGS LSLSMARRNLDSLEAR
Sbjct 1 VPPALHLVDPQIQLTIT------------ADPKVYPIILRLGSNLSLSMARRNLDSLEAR 48
Query 69 AFQSTPIVVQMTKLATTEELPDEFVVVTAK 98
AFQSTPIVVQMTKLATTEELPDEFVVVTAK
Sbjct 49 AFQSTPIVVQMTKLATTEELPDEFVVVTAK 78
>2cme_G G HYPOTHETICAL PROTEIN 5
Length=77
Score = 143 bits (360), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 76/90 (84%), Positives = 76/90 (84%), Gaps = 13/90 (14%)
Query 9 VPPALHLVDPQIQLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEAR 68
VPPALHLVDPQIQLTIT DPKVYPIILRLGS LSLSMARRNLDSLEAR
Sbjct 1 VPPALHLVDPQIQLTIT-------------DPKVYPIILRLGSNLSLSMARRNLDSLEAR 47
Query 69 AFQSTPIVVQMTKLATTEELPDEFVVVTAK 98
AFQSTPIVVQMTKLATTEELPDEFVVVTAK
Sbjct 48 AFQSTPIVVQMTKLATTEELPDEFVVVTAK 77
>2cme_E E HYPOTHETICAL PROTEIN 5
Length=77
Score = 143 bits (360), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 76/90 (84%), Positives = 76/90 (84%), Gaps = 13/90 (14%)
Query 9 VPPALHLVDPQIQLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEAR 68
VPPALHLVDPQIQLTIT DPKVYPIILRLGS LSLSMARRNLDSLEAR
Sbjct 1 VPPALHLVDPQIQLTIT-------------DPKVYPIILRLGSNLSLSMARRNLDSLEAR 47
Query 69 AFQSTPIVVQMTKLATTEELPDEFVVVTAK 98
AFQSTPIVVQMTKLATTEELPDEFVVVTAK
Sbjct 48 AFQSTPIVVQMTKLATTEELPDEFVVVTAK 77
>2cme_F F HYPOTHETICAL PROTEIN 5
Length=76
Score = 141 bits (356), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 75/89 (84%), Positives = 75/89 (84%), Gaps = 13/89 (15%)
Query 10 PPALHLVDPQIQLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEARA 69
PPALHLVDPQIQLTIT DPKVYPIILRLGS LSLSMARRNLDSLEARA
Sbjct 1 PPALHLVDPQIQLTIT-------------DPKVYPIILRLGSNLSLSMARRNLDSLEARA 47
Query 70 FQSTPIVVQMTKLATTEELPDEFVVVTAK 98
FQSTPIVVQMTKLATTEELPDEFVVVTAK
Sbjct 48 FQSTPIVVQMTKLATTEELPDEFVVVTAK 76
>2cme_D D HYPOTHETICAL PROTEIN 5
Length=76
Score = 141 bits (356), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 75/89 (84%), Positives = 75/89 (84%), Gaps = 13/89 (15%)
Query 10 PPALHLVDPQIQLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEARA 69
PPALHLVDPQIQLTIT DPKVYPIILRLGS LSLSMARRNLDSLEARA
Sbjct 1 PPALHLVDPQIQLTIT-------------DPKVYPIILRLGSNLSLSMARRNLDSLEARA 47
Query 70 FQSTPIVVQMTKLATTEELPDEFVVVTAK 98
FQSTPIVVQMTKLATTEELPDEFVVVTAK
Sbjct 48 FQSTPIVVQMTKLATTEELPDEFVVVTAK 76
>2cme_H H HYPOTHETICAL PROTEIN 5
Length=76
Score = 141 bits (356), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 75/89 (84%), Positives = 75/89 (84%), Gaps = 13/89 (15%)
Query 10 PPALHLVDPQIQLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEARA 69
PPALHLVDPQIQLTIT DPKVYPIILRLGS LSLSMARRNLDSLEARA
Sbjct 1 PPALHLVDPQIQLTIT-------------DPKVYPIILRLGSNLSLSMARRNLDSLEARA 47
Query 70 FQSTPIVVQMTKLATTEELPDEFVVVTAK 98
FQSTPIVVQMTKLATTEELPDEFVVVTAK
Sbjct 48 FQSTPIVVQMTKLATTEELPDEFVVVTAK 76
>2cme_C C HYPOTHETICAL PROTEIN 5
Length=76
Score = 141 bits (356), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 75/89 (84%), Positives = 75/89 (84%), Gaps = 13/89 (15%)
Query 10 PPALHLVDPQIQLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEARA 69
PPALHLVDPQIQLTIT DPKVYPIILRLGS LSLSMARRNLDSLEARA
Sbjct 1 PPALHLVDPQIQLTIT-------------DPKVYPIILRLGSNLSLSMARRNLDSLEARA 47
Query 70 FQSTPIVVQMTKLATTEELPDEFVVVTAK 98
FQSTPIVVQMTKLATTEELPDEFVVVTAK
Sbjct 48 FQSTPIVVQMTKLATTEELPDEFVVVTAK 76
>7ye8_B B ORF9b protein
Length=103
Score = 138 bits (348), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 77/88 (88%), Gaps = 0/88 (0%)
Query 11 PALHLVDPQIQLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEARAF 70
PAL LVDPQIQL +TRME+A+G+ QN+ PKVYPIILRLGS LSL+MAR+ L+SLE +AF
Sbjct 16 PALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAF 75
Query 71 QSTPIVVQMTKLATTEELPDEFVVVTAK 98
Q TPI VQMTKLATTEELPDEFVVVT K
Sbjct 76 QLTPIAVQMTKLATTEELPDEFVVVTVK 103
>7ye8_A A ORF9b protein
Length=103
Score = 122 bits (307), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 63/88 (72%), Positives = 68/88 (77%), Gaps = 0/88 (0%)
Query 11 PALHLVDPQIQLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEARAF 70
PAL LVDPQIQL +TRM PKVYPIILRLGS LSL+MAR+ L+SLE +AF
Sbjct 16 PALRLVDPQIQLAVTRMXXXXXXXXXXVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAF 75
Query 71 QSTPIVVQMTKLATTEELPDEFVVVTAK 98
Q TPI VQMTKLATTEELPDEFVVVT K
Sbjct 76 QLTPIAVQMTKLATTEELPDEFVVVTVK 103
>7ye7_B D ORF9b protein
Length=103
Score = 122 bits (307), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 61/86 (71%), Positives = 68/86 (79%), Gaps = 0/86 (0%)
Query 11 PALHLVDPQIQLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEARAF 70
PAL LVDPQIQL +TRME G+ QN+ PKVYPIILRLGS LSL+MAR+ L+S +AF
Sbjct 16 PALRLVDPQIQLAVTRMEXXXGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSXXXKAF 75
Query 71 QSTPIVVQMTKLATTEELPDEFVVVT 96
Q TPI VQMTKLA ELPDEFVVVT
Sbjct 76 QLTPIAVQMTKLAXXXELPDEFVVVT 101
>6z4u_A A Protein 9b
Length=97
Score = 120 bits (302), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 72/98 (73%), Gaps = 1/98 (1%)
Query 1 MDPNQTNVVPPALHLVDPQIQLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARR 60
MDP + + PAL LVDPQIQL +TR PKVYPIILRLGS LSL+MAR+
Sbjct 1 MDPKISEM-HPALRLVDPQIQLAVTRXXXXXXXXXXXXXPKVYPIILRLGSPLSLNMARK 59
Query 61 NLDSLEARAFQSTPIVVQMTKLATTEELPDEFVVVTAK 98
L+SLE +AFQ TPI VQMTKLATTEELPDEFVVVT K
Sbjct 60 TLNSLEDKAFQLTPIAVQMTKLATTEELPDEFVVVTVK 97
>7ye8_D D ORF9b protein
Length=103
Score = 120 bits (302), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 67/86 (78%), Gaps = 0/86 (0%)
Query 11 PALHLVDPQIQLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEARAF 70
PAL LVDPQIQL +TRM PKVYPIILRLGS LSL+MAR+ L+SLE +AF
Sbjct 16 PALRLVDPQIQLAVTRMXXXXXXXXXXVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAF 75
Query 71 QSTPIVVQMTKLATTEELPDEFVVVT 96
Q TPI VQMTKLATTEELPDEFVVVT
Sbjct 76 QLTPIAVQMTKLATTEELPDEFVVVT 101
>7ye7_D B ORF9b protein
Length=103
Score = 117 bits (294), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 60/86 (70%), Positives = 65/86 (76%), Gaps = 0/86 (0%)
Query 11 PALHLVDPQIQLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEARAF 70
PAL LVDPQIQL +TRM PKVYPIILRLGS LSL+MAR+ L+S +AF
Sbjct 16 PALRLVDPQIQLAVTRMXXXXXXXXXXVGPKVYPIILRLGSPLSLNMARKTLNSXXXKAF 75
Query 71 QSTPIVVQMTKLATTEELPDEFVVVT 96
Q TPI VQMTKLATTEELPDEFVVVT
Sbjct 76 QLTPIAVQMTKLATTEELPDEFVVVT 101
>6z4u_B B Protein 9b
Length=97
Score = 117 bits (293), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 66/88 (75%), Gaps = 0/88 (0%)
Query 11 PALHLVDPQIQLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEARAF 70
PAL LVDPQIQL +T PKVYPIILRLGS LSL+MAR+ L+SLE +AF
Sbjct 10 PALRLVDPQIQLAVTXXXXXXXXXXXXXXPKVYPIILRLGSPLSLNMARKTLNSLEDKAF 69
Query 71 QSTPIVVQMTKLATTEELPDEFVVVTAK 98
Q TPI VQMTKLATTEELPDEFVVVT K
Sbjct 70 QLTPIAVQMTKLATTEELPDEFVVVTVK 97
>7ye7_A C ORF9b protein
Length=103
Score = 117 bits (293), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 66/88 (75%), Gaps = 0/88 (0%)
Query 11 PALHLVDPQIQLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEARAF 70
PAL LVDPQIQL +T PKVYPIILRLGS LSL+MAR+ L+SLE +AF
Sbjct 16 PALRLVDPQIQLAVTXXXXXXXXXXXXXXPKVYPIILRLGSPLSLNMARKTLNSLEDKAF 75
Query 71 QSTPIVVQMTKLATTEELPDEFVVVTAK 98
Q TPI VQMTKLATTEELPDEFVVVT K
Sbjct 76 QLTPIAVQMTKLATTEELPDEFVVVTVK 103
>7ye8_C C ORF9b protein
Length=103
Score = 115 bits (288), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 60/87 (69%), Positives = 65/87 (75%), Gaps = 0/87 (0%)
Query 12 ALHLVDPQIQLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEARAFQ 71
AL LVDPQIQL +T PKVYPIILRLGS LSL+MAR+ L+SLE +AFQ
Sbjct 17 ALRLVDPQIQLAVTXXXXXXXXXXXXVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQ 76
Query 72 STPIVVQMTKLATTEELPDEFVVVTAK 98
TPI VQMTKLATTEELPDEFVVVT K
Sbjct 77 LTPIAVQMTKLATTEELPDEFVVVTVK 103
>7ye7_C A ORF9b protein
Length=103
Score = 113 bits (282), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 64/85 (75%), Gaps = 0/85 (0%)
Query 12 ALHLVDPQIQLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEARAFQ 71
AL LVDPQIQL +T PKVYPIILRLGS LSL+MAR+ L+SLE +AFQ
Sbjct 17 ALRLVDPQIQLAVTXXXXXXXXXXXXXXPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQ 76
Query 72 STPIVVQMTKLATTEELPDEFVVVT 96
TPI VQMTKLATTEELPDEFVVVT
Sbjct 77 LTPIAVQMTKLATTEELPDEFVVVT 101
>7kdt_B B ORF9b protein
Length=97
Score = 60.1 bits (144), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 33/38 (87%), Gaps = 0/38 (0%)
Query 40 PKVYPIILRLGSQLSLSMARRNLDSLEARAFQSTPIVV 77
PKVYPIILRLGS LSL+MAR+ L+SLE +AFQ TPI V
Sbjct 39 PKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAV 76
>7dhg_B B ORF9b protein
Length=97
Score = 54.7 bits (130), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 31/36 (86%), Gaps = 0/36 (0%)
Query 44 PIILRLGSQLSLSMARRNLDSLEARAFQSTPIVVQM 79
PIILRLGS LSL+MAR+ L+SLE +AFQ TPI VQM
Sbjct 43 PIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQM 78
>4lxs_A A Protein toll
Length=783
Score = 28.9 bits (63), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/53 (38%), Positives = 30/53 (57%), Gaps = 6/53 (11%)
Query 21 QLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEARAFQST 73
LT R+ED + G S D I LG+ ++L M+R L ++++RAF ST
Sbjct 364 NLTDLRLEDNLLTGI-SGD-----IFSNLGNLVTLVMSRNRLRTIDSRAFVST 410
>4lxr_A A Protein toll
Length=783
Score = 28.9 bits (63), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/53 (38%), Positives = 30/53 (57%), Gaps = 6/53 (11%)
Query 21 QLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEARAFQST 73
LT R+ED + G S D I LG+ ++L M+R L ++++RAF ST
Sbjct 364 NLTDLRLEDNLLTGI-SGD-----IFSNLGNLVTLVMSRNRLRTIDSRAFVST 410
Lambda K H a alpha
0.316 0.130 0.355 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 5863056032
Database: unitmol_20240403.fasta
Posted date: Apr 4, 2024 8:53 PM
Number of letters in database: 237,935,689
Number of sequences in database: 829,018
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40