BLASTP 2.11.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: unitmol_20240403.fasta
           829,018 sequences; 237,935,689 total letters



Query= sp|P59634|NS6_SARS ORF6 protein OS=Severe acute respiratory syndrome
coronavirus OX=694009 GN=6 PE=1 SV=1

Length=63
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

7vpg_I X ORF6 protein                                                 28.9    0.47 
7f90_B F ORF6 protein                                                 28.1    2.0  


>7vpg_I X ORF6 protein
Length=22

 Score = 28.9 bits (63),  Expect = 0.47, Method: Compositional matrix adjust.
 Identities = 13/13 (100%), Positives = 13/13 (100%), Gaps = 0/13 (0%)

Query  50  SELDDEEPMELDY  62
           SELDDEEPMELDY
Sbjct  9   SELDDEEPMELDY  21


>7f90_B F ORF6 protein
Length=63

 Score = 28.1 bits (61),  Expect = 2.0, Method: Compositional matrix adjust.
 Identities = 12/12 (100%), Positives = 12/12 (100%), Gaps = 0/12 (0%)

Query  52  LDDEEPMELDYP  63
           LDDEEPMELDYP
Sbjct  52  LDDEEPMELDYP  63



Lambda      K        H        a         alpha
   0.329    0.144    0.420    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 5849761652


  Database: unitmol_20240403.fasta
    Posted date:  Apr 4, 2024  8:53 PM
  Number of letters in database: 237,935,689
  Number of sequences in database:  829,018



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40