[Multiple Alignment(many alignments)]
[Alignment Bar(many alignments)]
[show plain BLAST file]
BLASTP 2.11.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: unitmol_20240403.fasta
829,018 sequences; 237,935,689 total letters
Query= sp|P59595|NCAP_SARS Nucleoprotein OS=Severe acute respiratory
syndrome coronavirus OX=694009 GN=N PE=1 SV=1
Length=422
Score E
Sequences producing significant alignments: (Bits) Value
8fg2_B B Nucleoprotein 686 0.0
8fg2_A A Nucleoprotein 686 0.0
8fd5_A A Nucleoprotein 686 0.0
1ssk_A A Nucleocapsid protein 290 4e-97
7acs_A A Nucleoprotein 273 9e-91
6yi3_A A Nucleoprotein 273 9e-91
7act_A A Nucleoprotein 273 1e-90
7sd4_A A Nucleoprotein 271 8e-90
2ofz_A A Nucleocapsid protein 268 1e-88
8x1h_B B Nucleoprotein 260 8e-86
7vnu_A A Nucleoprotein 256 3e-84
7vnu_B B Nucleoprotein 256 3e-84
8x1h_A A Nucleoprotein 256 3e-84
7cdz_A A Nucleoprotein 256 3e-84
8iv3_B B Nucleoprotein 256 6e-84
8iqj_B B Nucleoprotein 256 6e-84
8j6x_B B Nucleoprotein 256 6e-84
8iv3_C C Nucleoprotein 256 7e-84
8iqj_C C Nucleoprotein 256 7e-84
7n3c_C C Nucleoprotein 255 1e-83
7vnu_C C Nucleoprotein 254 2e-83
8x1h_C C Nucleoprotein 254 2e-83
7uw3_A A Nucleoprotein 254 2e-83
7cdz_D D Nucleoprotein 254 2e-83
7cdz_B B Nucleoprotein 254 3e-83
8j6x_C C Nucleoprotein 254 5e-83
8j6x_D D Nucleoprotein 254 5e-83
8iqj_D D Nucleoprotein 254 5e-83
7str_C C Nucleoprotein 253 5e-83
7n0r_A A Nucleoprotein 253 1e-82
7n0r_B B Nucleoprotein 253 1e-82
6m3m_C C Nucleoprotein 252 2e-82
7uw3_C C Nucleoprotein 252 2e-82
7cdz_C C Nucleoprotein 252 2e-82
6m3m_B B Nucleoprotein 252 2e-82
6m3m_D D Nucleoprotein 252 2e-82
8j6x_A A Nucleoprotein 252 4e-82
8iv3_A A Nucleoprotein 252 4e-82
8iqj_A A Nucleoprotein 252 4e-82
7cr5_A A Nucleoprotein 251 6e-82
7xx1_B B Nucleoprotein 250 7e-82
7xx1_A A Nucleoprotein 250 7e-82
7xx1_C C Nucleoprotein 250 7e-82
2jw8_B B Nucleocapsid protein 250 8e-82
2jw8_A A Nucleocapsid protein 250 8e-82
6vyo_D D Nucleoprotein 250 8e-82
6vyo_B B Nucleoprotein 250 8e-82
6vyo_C C Nucleoprotein 250 8e-82
7sts_D D Nucleoprotein 250 9e-82
7wzo_A A Nucleoprotein 250 9e-82
6vyo_A A Nucleoprotein 248 4e-81
7vbd_A A Nucleoprotein 246 3e-80
2cjr_D D NUCLEOCAPSID PROTEIN 244 1e-79
2cjr_A A NUCLEOCAPSID PROTEIN 244 1e-79
7uw3_B B Nucleoprotein 244 1e-79
2cjr_C C NUCLEOCAPSID PROTEIN 241 2e-78
2cjr_B B NUCLEOCAPSID PROTEIN 241 2e-78
7xwz_B B Nucleoprotein 240 5e-78
2cjr_F F NUCLEOCAPSID PROTEIN 238 3e-77
6wkp_C C Nucleoprotein 238 4e-77
7o35_B B Nucleoprotein 238 5e-77
6yun_B B Nucleoprotein 238 5e-77
6zco_A A Nucleoprotein 238 5e-77
2cjr_H H NUCLEOCAPSID PROTEIN 235 5e-76
2cjr_E E NUCLEOCAPSID PROTEIN 235 5e-76
6yun_A A Nucleoprotein 234 1e-75
6wzq_C C Nucleoprotein 234 1e-75
2og3_A A Nucleocapsid protein 234 2e-75
8iv3_D D Nucleoprotein 234 3e-75
7de1_B B Nucleoprotein 233 3e-75
2cjr_G G NUCLEOCAPSID PROTEIN 233 6e-75
6wzq_D D Nucleoprotein 233 7e-75
7ylb_B D Nucleoprotein 231 2e-74
6wzq_A A Nucleoprotein 231 3e-74
6wzq_B B Nucleoprotein 231 3e-74
6wkp_B B Nucleoprotein 230 4e-74
7c22_B B Nucleoprotein 229 9e-74
7ylb_H H Nucleoprotein 229 9e-74
7vnu_D D Nucleoprotein 229 1e-73
7o36_C C Nucleoprotein 229 2e-73
7c22_C C Nucleoprotein 228 4e-73
7o36_A A Nucleoprotein 228 7e-73
7sue_L K Nucleoprotein 226 2e-72
7sue_F D Nucleoprotein 226 2e-72
7sue_E C Nucleoprotein 226 2e-72
6wkp_D D Nucleoprotein 226 2e-72
6wzo_B B Nucleoprotein 225 3e-72
7ylb_E B Nucleoprotein 225 4e-72
7r98_C C Nucleoprotein 225 4e-72
7sue_K J Nucleoprotein 225 5e-72
7o05_D D Nucleoprotein 225 6e-72
7o05_C C Nucleoprotein 225 6e-72
7o35_C C Nucleoprotein 225 6e-72
7o35_A A Nucleoprotein 225 6e-72
7o36_D D Nucleoprotein 225 6e-72
8x1h_D D Nucleoprotein 225 6e-72
7uxx_F FFF Nucleoprotein 223 1e-71
7vbf_B B Nucleoprotein 223 2e-71
7ce0_A A Nucleoprotein 223 2e-71
7ce0_D D Nucleoprotein 223 2e-71
7ce0_B B Nucleoprotein 223 2e-71
7ce0_C C Nucleoprotein 223 2e-71
7vbf_A A Nucleoprotein 223 2e-71
6wzo_D D Nucleoprotein 223 2e-71
7ylb_K K Nucleoprotein 223 2e-71
7ylb_D A Nucleoprotein 223 2e-71
7ylb_J J Nucleoprotein 223 3e-71
7r98_A A Nucleoprotein 223 4e-71
7xx1_D D Nucleoprotein 223 4e-71
6m3m_A A Nucleoprotein 223 6e-71
7vbd_C C Nucleoprotein 222 6e-71
7uxx_A AAA Nucleoprotein 221 7e-71
7uxx_D DDD Nucleoprotein 221 7e-71
7uxz_D DDD Nucleoprotein 221 7e-71
7uxz_A AAA Nucleoprotein 221 7e-71
7uxx_E EEE Nucleoprotein 221 7e-71
7uxx_C CCC Nucleoprotein 221 7e-71
7uxx_B BBB Nucleoprotein 221 7e-71
7uxz_F FFF Nucleoprotein 221 7e-71
7uxz_E EEE Nucleoprotein 221 7e-71
7uxz_C CCC Nucleoprotein 221 7e-71
7uxz_B BBB Nucleoprotein 221 7e-71
7c22_A A Nucleoprotein 221 9e-71
7xxk_E E Nucleoprotein 221 9e-71
7xxk_D D Nucleoprotein 221 9e-71
7xxk_A A Nucleoprotein 221 9e-71
7ylb_G G Nucleoprotein 221 1e-70
7o05_A A Nucleoprotein 221 2e-70
7o36_B B Nucleoprotein 221 2e-70
7o35_D D Nucleoprotein 221 2e-70
7o05_B B Nucleoprotein 221 2e-70
7vbe_A A Nucleoprotein 220 3e-70
7de1_A A Nucleoprotein 220 3e-70
7c22_D D Nucleoprotein 220 4e-70
6wji_A A Nucleoprotein 220 4e-70
6wzo_C C Nucleoprotein 220 4e-70
6wzo_A A Nucleoprotein 220 4e-70
6wji_F F Nucleoprotein 220 4e-70
6wji_E E Nucleoprotein 220 4e-70
6wji_D D Nucleoprotein 220 4e-70
6wji_C C Nucleoprotein 220 4e-70
6wji_B B Nucleoprotein 220 4e-70
7xwz_A A Nucleoprotein 220 5e-70
7vbd_D D Nucleoprotein 220 5e-70
7ylb_A C Nucleoprotein 219 7e-70
7sts_C C Nucleoprotein 219 1e-69
7vbe_B B Nucleoprotein 218 2e-69
7xxk_B B Nucleoprotein 218 2e-69
7xxk_C C Nucleoprotein 218 3e-69
7xxk_F F Nucleoprotein 218 3e-69
7f2e_G G Nucleoprotein 217 4e-69
7f2e_D D Nucleoprotein 217 4e-69
7f2e_C C Nucleoprotein 217 4e-69
7f2e_I I Nucleoprotein 217 4e-69
7r98_B B Nucleoprotein 217 7e-69
7n3d_C C Nucleoprotein 216 1e-68
7f2b_B A Nucleoprotein 215 1e-68
7f2b_A B Nucleoprotein 215 1e-68
7f2e_A B Nucleoprotein 215 2e-68
7f2e_J J Nucleoprotein 215 2e-68
7f2e_H H Nucleoprotein 215 2e-68
7f2e_B A Nucleoprotein 215 2e-68
7vbd_B B Nucleoprotein 214 1e-67
7uw3_D D Nucleoprotein 214 2e-67
2gib_A A Nucleocapsid protein 210 2e-66
2gib_B B Nucleocapsid protein 208 9e-66
7xwx_A A Nucleoprotein 204 2e-64
7xwx_B B Nucleoprotein 202 2e-63
7xwx_G G Nucleoprotein 202 2e-63
7xwx_C C Nucleoprotein 202 2e-63
6wkp_A A Nucleoprotein 202 3e-63
7n0i_A A Nucleoprotein 198 6e-62
7n0i_B B Nucleoprotein 198 6e-62
7n0i_L G Nucleoprotein 198 6e-62
7n0i_G H Nucleoprotein 198 6e-62
7n0i_F F Nucleoprotein 198 6e-62
7n0i_E E Nucleoprotein 198 6e-62
7n0i_D D Nucleoprotein 198 6e-62
7n0i_C C Nucleoprotein 198 6e-62
7xwx_F F Nucleoprotein 198 6e-62
7xwx_D D Nucleoprotein 198 6e-62
7f2e_E E Nucleoprotein 196 6e-61
7f2e_K K Nucleoprotein 196 6e-61
7f2e_F F Nucleoprotein 195 9e-61
7xwx_E E Nucleoprotein 190 8e-59
7xwx_H H Nucleoprotein 185 5e-57
7f2e_L L Nucleoprotein 184 2e-56
4ud1_B B N PROTEIN 160 3e-46
4ud1_A A N PROTEIN 160 3e-46
4ud1_C C N PROTEIN 160 3e-46
6lnn_B B Nucleoprotein 155 6e-45
6lz8_C B Nucleoprotein 155 6e-45
6lz6_A A Nucleoprotein 155 6e-45
7dyd_B B Nucleoprotein 155 8e-45
6lz6_B B Nucleoprotein 155 8e-45
7dyd_A A Nucleoprotein 154 1e-44
6lz8_A A Nucleoprotein 154 2e-44
6lnn_A A Nucleoprotein 153 5e-44
6kl5_B B Nucleoprotein 148 4e-42
6kl6_B B Nucleoprotein 141 3e-39
6kl2_B B Nucleoprotein 140 5e-39
7dyd_C C Nucleoprotein 139 1e-38
6kl6_A A Nucleoprotein 138 3e-38
6kl2_A A Nucleoprotein 137 9e-38
6kl5_A A Nucleoprotein 137 1e-37
6lnn_C C Nucleoprotein 136 1e-37
6lz6_C C Nucleoprotein 136 1e-37
6lz8_D D Nucleoprotein 135 4e-37
6kl6_D D Nucleoprotein 135 4e-37
7dyd_D D Nucleoprotein 133 1e-36
6lz8_B C Nucleoprotein 133 1e-36
6lnn_D D Nucleoprotein 133 2e-36
4ud1_D D N PROTEIN 132 7e-36
6kl6_C C Nucleoprotein 132 7e-36
6lz6_D D Nucleoprotein 130 2e-35
4ud1_E E N PROTEIN 129 1e-34
6kl5_D D Nucleoprotein 127 3e-34
6kl2_D D Nucleoprotein 125 2e-33
6kl2_C C Nucleoprotein 125 2e-33
6kl5_C C Nucleoprotein 123 2e-32
7n45_A A Nucleoprotein 114 4e-29
3hd4_A A Nucleoprotein 112 1e-28
4kxj_A A Nucleoprotein 110 8e-28
6g13_D D Nucleoprotein 109 1e-27
6g13_C C Nucleoprotein 109 1e-27
6g13_B B Nucleoprotein 109 1e-27
4lmt_A A Nucleoprotein 109 2e-27
4lm7_A A Nucleoprotein 109 2e-27
4li4_A A Nucleoprotein 109 2e-27
4j3k_A A Nucleoprotein 109 2e-27
6g13_A A Nucleoprotein 108 3e-27
4lmc_A A Nucleoprotein 107 8e-27
4lm9_A A Nucleoprotein 107 8e-27
7pku_B B Nucleoprotein 77.4 2e-16
2gec_A A Nucleocapsid protein 77.8 6e-16
2gec_B B Nucleocapsid protein 77.8 7e-16
2c86_A A NUCLEOCAPSID PROTEIN 77.4 8e-16
2c86_B B NUCLEOCAPSID PROTEIN 77.4 8e-16
2bxx_B B NUCLEOCAPSID PROTEIN 77.4 8e-16
2bxx_A A NUCLEOCAPSID PROTEIN 77.4 8e-16
2btl_B B INFECTIOUS BRONCHITIS VIRUS NUCLEOCAPSID PROTEIN 75.9 3e-15
2btl_A A INFECTIOUS BRONCHITIS VIRUS NUCLEOCAPSID PROTEIN 75.9 3e-15
5epw_B B Nucleoprotein 60.5 7e-10
5epw_A A Nucleoprotein 60.1 8e-10
5n4k_A A Nucleoprotein 49.7 5e-06
5n4k_B B Nucleoprotein 49.7 5e-06
2ge7_B B Nucleocapsid protein 46.6 2e-05
2ge7_A A Nucleocapsid protein 46.6 2e-05
2ge8_A A Nucleocapsid protein 47.0 3e-05
2ge8_C F Nucleocapsid protein 47.0 3e-05
2ge8_D G Nucleocapsid protein 47.0 3e-05
2ge8_G I Nucleocapsid protein 46.6 3e-05
2ge8_H J Nucleocapsid protein 46.6 3e-05
2ge8_F D Nucleocapsid protein 46.6 3e-05
2ge8_B B Nucleocapsid protein 46.6 3e-05
2ge8_E C Nucleocapsid protein 46.6 3e-05
2ca1_A A NUCLEOCAPSID PROTEIN 42.7 7e-04
2ca1_B B NUCLEOCAPSID PROTEIN 41.6 0.002
7v0m_A A Ankyrin-1 36.2 0.94
7v0k_D H Ankyrin-1 36.2 0.94
8csv_A A Ankyrin-1 36.2 0.94
7uzu_A A Ankyrin-1 36.2 0.94
8cte_A A Ankyrin-1 36.2 0.94
8csl_A A Ankyrin-1 35.8 1.3
8cs9_A A Ankyrin-1 35.8 1.3
8th1_H H Nucleoprotein 28.9 7.4
>8fg2_B B Nucleoprotein
Length=419
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/422 (91%), Positives = 398/422 (94%), Gaps = 3/422 (1%)
Query 1 MSDNGPQSNQRSAPRITFGGPTDSTDNNQNGGRNGARPKQRRPQGLPNNTASWFTALTQH 60
MSDNGPQ NQR+APRITFGGP+DST +NQNG R+GAR KQRRPQGLPNNTASWFTALTQH
Sbjct 1 MSDNGPQ-NQRNAPRITFGGPSDSTGSNQNGERSGARSKQRRPQGLPNNTASWFTALTQH 59
Query 61 GKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEA 120
GKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPRWYFYYLGTGPEA
Sbjct 60 GKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEA 119
Query 121 SLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLPKGFYAEGSRGG 180
LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLPKGFYAEGSRGG
Sbjct 120 GLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPKGFYAEGSRGG 179
Query 181 SQASSRSSSRSRGNSRNSTPGSSRGNSPARMASGGGETALALLLLDRLNQLESKVSGKGQ 240
SQASSRSSSRSR +SRNSTPGSSRG SPARMA GG+ ALALLLLDRLNQLESK+SGKGQ
Sbjct 180 SQASSRSSSRSRNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESKMSGKGQ 239
Query 241 QQQGQTVTKKSAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYK 300
QQQGQTVTKKSAAEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYK
Sbjct 240 QQQGQTVTKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYK 299
Query 301 HWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDA 360
HWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDA
Sbjct 300 HWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDA 359
Query 361 YKTFPPTEPKKDKKKKTDEAQPLPQRQKKQPTVTLLPAADMDDFSRQLQNSMSGASADST 420
YKTFPPTEPKKDKKKK DE Q LPQRQKKQ TVTLLPAAD+DDFS+QLQ SMS SADST
Sbjct 360 YKTFPPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAADLDDFSKQLQQSMS--SADST 417
Query 421 QA 422
QA
Sbjct 418 QA 419
>8fg2_A A Nucleoprotein
Length=419
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/422 (91%), Positives = 398/422 (94%), Gaps = 3/422 (1%)
Query 1 MSDNGPQSNQRSAPRITFGGPTDSTDNNQNGGRNGARPKQRRPQGLPNNTASWFTALTQH 60
MSDNGPQ NQR+APRITFGGP+DST +NQNG R+GAR KQRRPQGLPNNTASWFTALTQH
Sbjct 1 MSDNGPQ-NQRNAPRITFGGPSDSTGSNQNGERSGARSKQRRPQGLPNNTASWFTALTQH 59
Query 61 GKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEA 120
GKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPRWYFYYLGTGPEA
Sbjct 60 GKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEA 119
Query 121 SLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLPKGFYAEGSRGG 180
LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLPKGFYAEGSRGG
Sbjct 120 GLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPKGFYAEGSRGG 179
Query 181 SQASSRSSSRSRGNSRNSTPGSSRGNSPARMASGGGETALALLLLDRLNQLESKVSGKGQ 240
SQASSRSSSRSR +SRNSTPGSSRG SPARMA GG+ ALALLLLDRLNQLESK+SGKGQ
Sbjct 180 SQASSRSSSRSRNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESKMSGKGQ 239
Query 241 QQQGQTVTKKSAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYK 300
QQQGQTVTKKSAAEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYK
Sbjct 240 QQQGQTVTKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYK 299
Query 301 HWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDA 360
HWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDA
Sbjct 300 HWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDA 359
Query 361 YKTFPPTEPKKDKKKKTDEAQPLPQRQKKQPTVTLLPAADMDDFSRQLQNSMSGASADST 420
YKTFPPTEPKKDKKKK DE Q LPQRQKKQ TVTLLPAAD+DDFS+QLQ SMS SADST
Sbjct 360 YKTFPPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAADLDDFSKQLQQSMS--SADST 417
Query 421 QA 422
QA
Sbjct 418 QA 419
>8fd5_A A Nucleoprotein
Length=419
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/422 (91%), Positives = 398/422 (94%), Gaps = 3/422 (1%)
Query 1 MSDNGPQSNQRSAPRITFGGPTDSTDNNQNGGRNGARPKQRRPQGLPNNTASWFTALTQH 60
MSDNGPQ NQR+APRITFGGP+DST +NQNG R+GAR KQRRPQGLPNNTASWFTALTQH
Sbjct 1 MSDNGPQ-NQRNAPRITFGGPSDSTGSNQNGERSGARSKQRRPQGLPNNTASWFTALTQH 59
Query 61 GKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEA 120
GKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPRWYFYYLGTGPEA
Sbjct 60 GKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEA 119
Query 121 SLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLPKGFYAEGSRGG 180
LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLPKGFYAEGSRGG
Sbjct 120 GLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPKGFYAEGSRGG 179
Query 181 SQASSRSSSRSRGNSRNSTPGSSRGNSPARMASGGGETALALLLLDRLNQLESKVSGKGQ 240
SQASSRSSSRSR +SRNSTPGSSRG SPARMA GG+ ALALLLLDRLNQLESK+SGKGQ
Sbjct 180 SQASSRSSSRSRNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESKMSGKGQ 239
Query 241 QQQGQTVTKKSAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYK 300
QQQGQTVTKKSAAEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYK
Sbjct 240 QQQGQTVTKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYK 299
Query 301 HWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDA 360
HWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDA
Sbjct 300 HWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDA 359
Query 361 YKTFPPTEPKKDKKKKTDEAQPLPQRQKKQPTVTLLPAADMDDFSRQLQNSMSGASADST 420
YKTFPPTEPKKDKKKK DE Q LPQRQKKQ TVTLLPAAD+DDFS+QLQ SMS SADST
Sbjct 360 YKTFPPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAADLDDFSKQLQQSMS--SADST 417
Query 421 QA 422
QA
Sbjct 418 QA 419
>1ssk_A A Nucleocapsid protein
Length=158
Score = 290 bits (743), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 137/138 (99%), Positives = 137/138 (99%), Gaps = 0/138 (0%)
Query 44 QGLPNNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMK 103
GLPNNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMK
Sbjct 21 MGLPNNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMK 80
Query 104 ELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLP 163
ELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLP
Sbjct 81 ELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLP 140
Query 164 QGTTLPKGFYAEGSRGGS 181
QGTTLPKGFYAEGSRGGS
Sbjct 141 QGTTLPKGFYAEGSRGGS 158
>7acs_A A Nucleoprotein
Length=140
Score = 273 bits (699), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 127/138 (92%), Positives = 133/138 (96%), Gaps = 0/138 (0%)
Query 44 QGLPNNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMK 103
GLPNNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK
Sbjct 3 MGLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMK 62
Query 104 ELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLP 163
+LSPRWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLP
Sbjct 63 DLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLP 122
Query 164 QGTTLPKGFYAEGSRGGS 181
QGTTLPKGFYAEGSRGGS
Sbjct 123 QGTTLPKGFYAEGSRGGS 140
>6yi3_A A Nucleoprotein
Length=140
Score = 273 bits (699), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 127/138 (92%), Positives = 133/138 (96%), Gaps = 0/138 (0%)
Query 44 QGLPNNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMK 103
GLPNNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK
Sbjct 3 MGLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMK 62
Query 104 ELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLP 163
+LSPRWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLP
Sbjct 63 DLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLP 122
Query 164 QGTTLPKGFYAEGSRGGS 181
QGTTLPKGFYAEGSRGGS
Sbjct 123 QGTTLPKGFYAEGSRGGS 140
>7act_A A Nucleoprotein
Length=140
Score = 273 bits (698), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 127/137 (93%), Positives = 133/137 (97%), Gaps = 0/137 (0%)
Query 45 GLPNNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKE 104
GLPNNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+
Sbjct 4 GLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKD 63
Query 105 LSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQ 164
LSPRWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQ
Sbjct 64 LSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQ 123
Query 165 GTTLPKGFYAEGSRGGS 181
GTTLPKGFYAEGSRGGS
Sbjct 124 GTTLPKGFYAEGSRGGS 140
>7sd4_A A Nucleoprotein
Length=136
Score = 271 bits (692), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 125/135 (93%), Positives = 131/135 (97%), Gaps = 0/135 (0%)
Query 41 RRPQGLPNNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDG 100
RRPQGLPNNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDG
Sbjct 2 RRPQGLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDG 61
Query 101 KMKELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVL 160
KMK+LSPRWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VL
Sbjct 62 KMKDLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVL 121
Query 161 QLPQGTTLPKGFYAE 175
QLPQGTTLPKGFYAE
Sbjct 122 QLPQGTTLPKGFYAE 136
>2ofz_A A Nucleocapsid protein
Length=138
Score = 268 bits (685), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 126/126 (100%), Positives = 126/126 (100%), Gaps = 0/126 (0%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR
Sbjct 13 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 72
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL
Sbjct 73 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 132
Query 169 PKGFYA 174
PKGFYA
Sbjct 133 PKGFYA 138
>8x1h_B B Nucleoprotein
Length=134
Score = 260 bits (665), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 120/130 (92%), Positives = 126/130 (97%), Gaps = 0/130 (0%)
Query 47 PNNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELS 106
PNNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LS
Sbjct 5 PNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLS 64
Query 107 PRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGT 166
PRWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGT
Sbjct 65 PRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGT 124
Query 167 TLPKGFYAEG 176
TLPKGFYAEG
Sbjct 125 TLPKGFYAEG 134
>7vnu_A A Nucleoprotein
Length=131
Score = 256 bits (655), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 118/128 (92%), Positives = 124/128 (97%), Gaps = 0/128 (0%)
Query 48 NNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSP 107
NNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSP
Sbjct 4 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 63
Query 108 RWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTT 167
RWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTT
Sbjct 64 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 123
Query 168 LPKGFYAE 175
LPKGFYAE
Sbjct 124 LPKGFYAE 131
>7vnu_B B Nucleoprotein
Length=131
Score = 256 bits (655), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 118/128 (92%), Positives = 124/128 (97%), Gaps = 0/128 (0%)
Query 48 NNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSP 107
NNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSP
Sbjct 4 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 63
Query 108 RWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTT 167
RWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTT
Sbjct 64 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 123
Query 168 LPKGFYAE 175
LPKGFYAE
Sbjct 124 LPKGFYAE 131
>8x1h_A A Nucleoprotein
Length=134
Score = 256 bits (655), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 118/128 (92%), Positives = 124/128 (97%), Gaps = 0/128 (0%)
Query 48 NNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSP 107
NNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSP
Sbjct 6 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 65
Query 108 RWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTT 167
RWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTT
Sbjct 66 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 125
Query 168 LPKGFYAE 175
LPKGFYAE
Sbjct 126 LPKGFYAE 133
>7cdz_A A Nucleoprotein
Length=137
Score = 256 bits (655), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 118/128 (92%), Positives = 124/128 (97%), Gaps = 0/128 (0%)
Query 48 NNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSP 107
NNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSP
Sbjct 10 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 69
Query 108 RWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTT 167
RWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTT
Sbjct 70 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 129
Query 168 LPKGFYAE 175
LPKGFYAE
Sbjct 130 LPKGFYAE 137
>8iv3_B B Nucleoprotein
Length=155
Score = 256 bits (655), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 118/128 (92%), Positives = 124/128 (97%), Gaps = 0/128 (0%)
Query 48 NNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSP 107
NNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSP
Sbjct 28 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 87
Query 108 RWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTT 167
RWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTT
Sbjct 88 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 147
Query 168 LPKGFYAE 175
LPKGFYAE
Sbjct 148 LPKGFYAE 155
>8iqj_B B Nucleoprotein
Length=155
Score = 256 bits (655), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 118/128 (92%), Positives = 124/128 (97%), Gaps = 0/128 (0%)
Query 48 NNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSP 107
NNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSP
Sbjct 28 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 87
Query 108 RWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTT 167
RWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTT
Sbjct 88 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 147
Query 168 LPKGFYAE 175
LPKGFYAE
Sbjct 148 LPKGFYAE 155
>8j6x_B B Nucleoprotein
Length=155
Score = 256 bits (655), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 118/128 (92%), Positives = 124/128 (97%), Gaps = 0/128 (0%)
Query 48 NNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSP 107
NNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSP
Sbjct 28 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 87
Query 108 RWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTT 167
RWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTT
Sbjct 88 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 147
Query 168 LPKGFYAE 175
LPKGFYAE
Sbjct 148 LPKGFYAE 155
>8iv3_C C Nucleoprotein
Length=155
Score = 256 bits (655), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 118/129 (91%), Positives = 124/129 (96%), Gaps = 0/129 (0%)
Query 47 PNNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELS 106
PNNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+R GDGKMK+LS
Sbjct 27 PNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRXGDGKMKDLS 86
Query 107 PRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGT 166
PRWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGT
Sbjct 87 PRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGT 146
Query 167 TLPKGFYAE 175
TLPKGFYAE
Sbjct 147 TLPKGFYAE 155
>8iqj_C C Nucleoprotein
Length=155
Score = 256 bits (655), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 118/129 (91%), Positives = 124/129 (96%), Gaps = 0/129 (0%)
Query 47 PNNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELS 106
PNNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+R GDGKMK+LS
Sbjct 27 PNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRXGDGKMKDLS 86
Query 107 PRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGT 166
PRWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGT
Sbjct 87 PRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGT 146
Query 167 TLPKGFYAE 175
TLPKGFYAE
Sbjct 147 TLPKGFYAE 155
>7n3c_C C Nucleoprotein
Length=130
Score = 255 bits (651), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 117/127 (92%), Positives = 123/127 (97%), Gaps = 0/127 (0%)
Query 48 NNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSP 107
NNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSP
Sbjct 4 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 63
Query 108 RWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTT 167
RWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTT
Sbjct 64 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 123
Query 168 LPKGFYA 174
LPKGFYA
Sbjct 124 LPKGFYA 130
>7vnu_C C Nucleoprotein
Length=131
Score = 254 bits (649), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 117/127 (92%), Positives = 123/127 (97%), Gaps = 0/127 (0%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPR
Sbjct 5 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 64
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTL
Sbjct 65 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 124
Query 169 PKGFYAE 175
PKGFYAE
Sbjct 125 PKGFYAE 131
>8x1h_C C Nucleoprotein
Length=134
Score = 254 bits (649), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 117/127 (92%), Positives = 123/127 (97%), Gaps = 0/127 (0%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPR
Sbjct 7 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 66
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTL
Sbjct 67 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 126
Query 169 PKGFYAE 175
PKGFYAE
Sbjct 127 PKGFYAE 133
>7uw3_A A Nucleoprotein
Length=136
Score = 254 bits (649), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 117/127 (92%), Positives = 123/127 (97%), Gaps = 0/127 (0%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPR
Sbjct 10 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 69
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTL
Sbjct 70 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 129
Query 169 PKGFYAE 175
PKGFYAE
Sbjct 130 PKGFYAE 136
>7cdz_D D Nucleoprotein
Length=137
Score = 254 bits (649), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 117/127 (92%), Positives = 123/127 (97%), Gaps = 0/127 (0%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPR
Sbjct 11 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 70
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTL
Sbjct 71 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 130
Query 169 PKGFYAE 175
PKGFYAE
Sbjct 131 PKGFYAE 137
>7cdz_B B Nucleoprotein
Length=137
Score = 254 bits (649), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 117/127 (92%), Positives = 123/127 (97%), Gaps = 0/127 (0%)
Query 48 NNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSP 107
NNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSP
Sbjct 10 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 69
Query 108 RWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTT 167
RWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTT
Sbjct 70 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 129
Query 168 LPKGFYA 174
LPKGFYA
Sbjct 130 LPKGFYA 136
>8j6x_C C Nucleoprotein
Length=155
Score = 254 bits (649), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 117/129 (91%), Positives = 123/129 (95%), Gaps = 0/129 (0%)
Query 47 PNNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELS 106
PNNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+ GDGKMK+LS
Sbjct 27 PNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIXXGDGKMKDLS 86
Query 107 PRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGT 166
PRWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGT
Sbjct 87 PRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGT 146
Query 167 TLPKGFYAE 175
TLPKGFYAE
Sbjct 147 TLPKGFYAE 155
>8j6x_D D Nucleoprotein
Length=155
Score = 254 bits (649), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 117/128 (91%), Positives = 123/128 (96%), Gaps = 0/128 (0%)
Query 48 NNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSP 107
NNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGD KMK+LSP
Sbjct 28 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDXKMKDLSP 87
Query 108 RWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTT 167
RWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTT
Sbjct 88 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 147
Query 168 LPKGFYAE 175
LPKGFYAE
Sbjct 148 LPKGFYAE 155
>8iqj_D D Nucleoprotein
Length=155
Score = 254 bits (649), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 117/128 (91%), Positives = 123/128 (96%), Gaps = 0/128 (0%)
Query 48 NNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSP 107
NNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGD KMK+LSP
Sbjct 28 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDXKMKDLSP 87
Query 108 RWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTT 167
RWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTT
Sbjct 88 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 147
Query 168 LPKGFYAE 175
LPKGFYAE
Sbjct 148 LPKGFYAE 155
>7str_C C Nucleoprotein
Length=130
Score = 253 bits (646), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 116/126 (92%), Positives = 122/126 (97%), Gaps = 0/126 (0%)
Query 48 NNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSP 107
NNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSP
Sbjct 4 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 63
Query 108 RWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTT 167
RWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTT
Sbjct 64 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 123
Query 168 LPKGFY 173
LPKGFY
Sbjct 124 LPKGFY 129
>7n0r_A A Nucleoprotein
Length=129
Score = 253 bits (645), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 116/126 (92%), Positives = 122/126 (97%), Gaps = 0/126 (0%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
TASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPRW
Sbjct 4 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 63
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLP
Sbjct 64 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 123
Query 170 KGFYAE 175
KGFYAE
Sbjct 124 KGFYAE 129
>7n0r_B B Nucleoprotein
Length=129
Score = 253 bits (645), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 116/126 (92%), Positives = 122/126 (97%), Gaps = 0/126 (0%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
TASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPRW
Sbjct 4 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 63
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLP
Sbjct 64 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 123
Query 170 KGFYAE 175
KGFYAE
Sbjct 124 KGFYAE 129
>6m3m_C C Nucleoprotein
Length=136
Score = 252 bits (644), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 116/127 (91%), Positives = 122/127 (96%), Gaps = 0/127 (0%)
Query 47 PNNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELS 106
PNNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+R GDGKMK+LS
Sbjct 8 PNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRXGDGKMKDLS 67
Query 107 PRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGT 166
PRWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGT
Sbjct 68 PRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGT 127
Query 167 TLPKGFY 173
TLPKGFY
Sbjct 128 TLPKGFY 134
>7uw3_C C Nucleoprotein
Length=136
Score = 252 bits (644), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 116/126 (92%), Positives = 122/126 (97%), Gaps = 0/126 (0%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPR
Sbjct 10 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 69
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTL
Sbjct 70 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 129
Query 169 PKGFYA 174
PKGFYA
Sbjct 130 PKGFYA 135
>7cdz_C C Nucleoprotein
Length=137
Score = 252 bits (644), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 116/126 (92%), Positives = 122/126 (97%), Gaps = 0/126 (0%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPR
Sbjct 11 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 70
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTL
Sbjct 71 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 130
Query 169 PKGFYA 174
PKGFYA
Sbjct 131 PKGFYA 136
>6m3m_B B Nucleoprotein
Length=136
Score = 252 bits (643), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 116/127 (91%), Positives = 122/127 (96%), Gaps = 0/127 (0%)
Query 48 NNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSP 107
NNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RG DGKMK+LSP
Sbjct 9 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGXDGKMKDLSP 68
Query 108 RWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTT 167
RWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTT
Sbjct 69 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 128
Query 168 LPKGFYA 174
LPKGFYA
Sbjct 129 LPKGFYA 135
>6m3m_D D Nucleoprotein
Length=136
Score = 252 bits (643), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 116/127 (91%), Positives = 122/127 (96%), Gaps = 0/127 (0%)
Query 48 NNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSP 107
NNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGD KMK+LSP
Sbjct 9 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDXKMKDLSP 68
Query 108 RWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTT 167
RWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTT
Sbjct 69 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 128
Query 168 LPKGFYA 174
LPKGFYA
Sbjct 129 LPKGFYA 135
>8j6x_A A Nucleoprotein
Length=155
Score = 252 bits (643), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 116/127 (91%), Positives = 122/127 (96%), Gaps = 0/127 (0%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+R GDGKMK+LSPR
Sbjct 29 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRXGDGKMKDLSPR 88
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTL
Sbjct 89 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 148
Query 169 PKGFYAE 175
PKGFYAE
Sbjct 149 PKGFYAE 155
>8iv3_A A Nucleoprotein
Length=155
Score = 252 bits (643), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 116/127 (91%), Positives = 122/127 (96%), Gaps = 0/127 (0%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+R GDGKMK+LSPR
Sbjct 29 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRXGDGKMKDLSPR 88
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTL
Sbjct 89 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 148
Query 169 PKGFYAE 175
PKGFYAE
Sbjct 149 PKGFYAE 155
>8iqj_A A Nucleoprotein
Length=155
Score = 252 bits (643), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 116/127 (91%), Positives = 122/127 (96%), Gaps = 0/127 (0%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+R GDGKMK+LSPR
Sbjct 29 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRXGDGKMKDLSPR 88
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTL
Sbjct 89 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 148
Query 169 PKGFYAE 175
PKGFYAE
Sbjct 149 PKGFYAE 155
>7cr5_A A Nucleoprotein
Length=134
Score = 251 bits (640), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 115/125 (92%), Positives = 121/125 (97%), Gaps = 0/125 (0%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPR
Sbjct 8 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 67
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTL
Sbjct 68 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 127
Query 169 PKGFY 173
PKGFY
Sbjct 128 PKGFY 132
>7xx1_B B Nucleoprotein
Length=125
Score = 250 bits (638), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 115/125 (92%), Positives = 121/125 (97%), Gaps = 0/125 (0%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
TASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPRW
Sbjct 1 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 60
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLP
Sbjct 61 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 120
Query 170 KGFYA 174
KGFYA
Sbjct 121 KGFYA 125
>7xx1_A A Nucleoprotein
Length=125
Score = 250 bits (638), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 115/125 (92%), Positives = 121/125 (97%), Gaps = 0/125 (0%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
TASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPRW
Sbjct 1 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 60
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLP
Sbjct 61 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 120
Query 170 KGFYA 174
KGFYA
Sbjct 121 KGFYA 125
>7xx1_C C Nucleoprotein
Length=125
Score = 250 bits (638), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 115/125 (92%), Positives = 121/125 (97%), Gaps = 0/125 (0%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
TASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPRW
Sbjct 1 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 60
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLP
Sbjct 61 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 120
Query 170 KGFYA 174
KGFYA
Sbjct 121 KGFYA 125
>2jw8_B B Nucleocapsid protein
Length=128
Score = 250 bits (638), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 118/118 (100%), Positives = 118/118 (100%), Gaps = 0/118 (0%)
Query 248 TKKSAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQ 307
TKKSAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQ
Sbjct 11 TKKSAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQ 70
Query 308 FAPSASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FAPSASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP
Sbjct 71 FAPSASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 128
>2jw8_A A Nucleocapsid protein
Length=128
Score = 250 bits (638), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 118/118 (100%), Positives = 118/118 (100%), Gaps = 0/118 (0%)
Query 248 TKKSAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQ 307
TKKSAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQ
Sbjct 11 TKKSAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQ 70
Query 308 FAPSASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FAPSASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP
Sbjct 71 FAPSASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 128
>6vyo_D D Nucleoprotein
Length=128
Score = 250 bits (638), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 115/125 (92%), Positives = 121/125 (97%), Gaps = 0/125 (0%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
TASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPRW
Sbjct 4 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 63
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLP
Sbjct 64 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 123
Query 170 KGFYA 174
KGFYA
Sbjct 124 KGFYA 128
>6vyo_B B Nucleoprotein
Length=128
Score = 250 bits (638), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 115/125 (92%), Positives = 121/125 (97%), Gaps = 0/125 (0%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
TASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPRW
Sbjct 4 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 63
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLP
Sbjct 64 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 123
Query 170 KGFYA 174
KGFYA
Sbjct 124 KGFYA 128
>6vyo_C C Nucleoprotein
Length=128
Score = 250 bits (638), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 115/125 (92%), Positives = 121/125 (97%), Gaps = 0/125 (0%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
TASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPRW
Sbjct 4 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 63
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLP
Sbjct 64 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 123
Query 170 KGFYA 174
KGFYA
Sbjct 124 KGFYA 128
>7sts_D D Nucleoprotein
Length=130
Score = 250 bits (638), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 115/125 (92%), Positives = 121/125 (97%), Gaps = 0/125 (0%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
TASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPRW
Sbjct 6 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 65
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLP
Sbjct 66 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 125
Query 170 KGFYA 174
KGFYA
Sbjct 126 KGFYA 130
>7wzo_A A Nucleoprotein
Length=131
Score = 250 bits (638), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 115/125 (92%), Positives = 121/125 (97%), Gaps = 0/125 (0%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
TASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPRW
Sbjct 6 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 65
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLP
Sbjct 66 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 125
Query 170 KGFYA 174
KGFYA
Sbjct 126 KGFYA 130
>6vyo_A A Nucleoprotein
Length=128
Score = 248 bits (634), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 114/124 (92%), Positives = 120/124 (97%), Gaps = 0/124 (0%)
Query 51 ASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRWY 110
ASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPRWY
Sbjct 5 ASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWY 64
Query 111 FYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLPK 170
FYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLPK
Sbjct 65 FYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPK 124
Query 171 GFYA 174
GFYA
Sbjct 125 GFYA 128
>7vbd_A A Nucleoprotein
Length=127
Score = 246 bits (628), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 113/123 (92%), Positives = 119/123 (97%), Gaps = 0/123 (0%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
TASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPRW
Sbjct 2 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 61
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLP
Sbjct 62 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 121
Query 170 KGF 172
KGF
Sbjct 122 KGF 124
>2cjr_D D NUCLEOCAPSID PROTEIN
Length=128
Score = 244 bits (624), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 115/115 (100%), Positives = 115/115 (100%), Gaps = 0/115 (0%)
Query 251 SAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAP 310
SAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAP
Sbjct 14 SAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAP 73
Query 311 SASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
SASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP
Sbjct 74 SASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 128
>2cjr_A A NUCLEOCAPSID PROTEIN
Length=128
Score = 244 bits (624), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 115/115 (100%), Positives = 115/115 (100%), Gaps = 0/115 (0%)
Query 251 SAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAP 310
SAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAP
Sbjct 14 SAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAP 73
Query 311 SASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
SASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP
Sbjct 74 SASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 128
>7uw3_B B Nucleoprotein
Length=136
Score = 244 bits (624), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 113/127 (89%), Positives = 119/127 (94%), Gaps = 0/127 (0%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RG MK+LSPR
Sbjct 10 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGXXXXMKDLSPR 69
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTL
Sbjct 70 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 129
Query 169 PKGFYAE 175
PKGFYAE
Sbjct 130 PKGFYAE 136
>2cjr_C C NUCLEOCAPSID PROTEIN
Length=128
Score = 241 bits (615), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 113/113 (100%), Positives = 113/113 (100%), Gaps = 0/113 (0%)
Query 253 AEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSA 312
AEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSA
Sbjct 16 AEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSA 75
Query 313 SAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
SAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP
Sbjct 76 SAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 128
>2cjr_B B NUCLEOCAPSID PROTEIN
Length=128
Score = 241 bits (615), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 113/113 (100%), Positives = 113/113 (100%), Gaps = 0/113 (0%)
Query 253 AEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSA 312
AEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSA
Sbjct 16 AEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSA 75
Query 313 SAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
SAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP
Sbjct 76 SAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 128
>7xwz_B B Nucleoprotein
Length=125
Score = 240 bits (613), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 111/125 (89%), Positives = 117/125 (94%), Gaps = 0/125 (0%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGG K+LSPR
Sbjct 1 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGXXXXKDLSPR 60
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTL
Sbjct 61 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 120
Query 169 PKGFY 173
PKGFY
Sbjct 121 PKGFY 125
>2cjr_F F NUCLEOCAPSID PROTEIN
Length=128
Score = 238 bits (608), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 112/112 (100%), Positives = 112/112 (100%), Gaps = 0/112 (0%)
Query 252 AAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPS 311
AAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPS
Sbjct 15 AAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPS 74
Query 312 ASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKT 363
ASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKT
Sbjct 75 ASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKT 126
>6wkp_C C Nucleoprotein
Length=128
Score = 238 bits (607), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 110/124 (89%), Positives = 116/124 (94%), Gaps = 0/124 (0%)
Query 51 ASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRWY 110
ASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGG K+LSPRWY
Sbjct 5 ASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGXXXXKDLSPRWY 64
Query 111 FYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLPK 170
FYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLPK
Sbjct 65 FYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPK 124
Query 171 GFYA 174
GFYA
Sbjct 125 GFYA 128
>7o35_B B Nucleoprotein
Length=136
Score = 238 bits (608), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 113/118 (96%), Positives = 114/118 (97%), Gaps = 0/118 (0%)
Query 248 TKKSAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQ 307
TKKSAAEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQ
Sbjct 19 TKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQ 78
Query 308 FAPSASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FAPSASAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 79 FAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>6yun_B B Nucleoprotein
Length=135
Score = 238 bits (607), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 113/118 (96%), Positives = 114/118 (97%), Gaps = 0/118 (0%)
Query 248 TKKSAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQ 307
TKKSAAEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQ
Sbjct 18 TKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQ 77
Query 308 FAPSASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FAPSASAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 78 FAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 135
>6zco_A A Nucleoprotein
Length=135
Score = 238 bits (607), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 113/118 (96%), Positives = 114/118 (97%), Gaps = 0/118 (0%)
Query 248 TKKSAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQ 307
TKKSAAEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQ
Sbjct 18 TKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQ 77
Query 308 FAPSASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FAPSASAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 78 FAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 135
>2cjr_H H NUCLEOCAPSID PROTEIN
Length=128
Score = 235 bits (600), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)
Query 256 SKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAF 315
SKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAF
Sbjct 19 SKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAF 78
Query 316 FGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP
Sbjct 79 FGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 128
>2cjr_E E NUCLEOCAPSID PROTEIN
Length=128
Score = 235 bits (600), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)
Query 256 SKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAF 315
SKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAF
Sbjct 19 SKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAF 78
Query 316 FGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP
Sbjct 79 FGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 128
>6yun_A A Nucleoprotein
Length=135
Score = 234 bits (598), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 111/116 (96%), Positives = 112/116 (97%), Gaps = 0/116 (0%)
Query 250 KSAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFA 309
KSAAEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFA
Sbjct 20 KSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFA 79
Query 310 PSASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
PSASAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 80 PSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 135
>6wzq_C C Nucleoprotein
Length=137
Score = 234 bits (598), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 111/116 (96%), Positives = 112/116 (97%), Gaps = 0/116 (0%)
Query 250 KSAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFA 309
KSAAEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFA
Sbjct 22 KSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFA 81
Query 310 PSASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
PSASAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 82 PSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 137
>2og3_A A Nucleocapsid protein
Length=138
Score = 234 bits (597), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 112/125 (90%), Positives = 112/125 (90%), Gaps = 0/125 (0%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRA LSPRW
Sbjct 14 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRAXXXXXXXXXXXXXLSPRW 73
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP
Sbjct 74 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 133
Query 170 KGFYA 174
KGFYA
Sbjct 134 KGFYA 138
>8iv3_D D Nucleoprotein
Length=155
Score = 234 bits (598), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 116/128 (91%), Positives = 122/128 (95%), Gaps = 0/128 (0%)
Query 48 NNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSP 107
NNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+R DGKMK+LSP
Sbjct 28 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRXXDGKMKDLSP 87
Query 108 RWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTT 167
RWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTT
Sbjct 88 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 147
Query 168 LPKGFYAE 175
LPKGFYAE
Sbjct 148 LPKGFYAE 155
>7de1_B B Nucleoprotein
Length=115
Score = 233 bits (593), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 110/115 (96%), Positives = 111/115 (97%), Gaps = 0/115 (0%)
Query 251 SAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAP 310
SAAEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAP
Sbjct 1 SAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAP 60
Query 311 SASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
SASAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 61 SASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 115
>2cjr_G G NUCLEOCAPSID PROTEIN
Length=128
Score = 233 bits (593), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 255 ASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASA 314
ASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASA
Sbjct 18 ASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASA 77
Query 315 FFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKT 363
FFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKT
Sbjct 78 FFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKT 126
>6wzq_D D Nucleoprotein
Length=137
Score = 233 bits (593), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 110/115 (96%), Positives = 111/115 (97%), Gaps = 0/115 (0%)
Query 251 SAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAP 310
SAAEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAP
Sbjct 23 SAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAP 82
Query 311 SASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
SASAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 83 SASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 137
>7ylb_B D Nucleoprotein
Length=122
Score = 231 bits (589), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 109/114 (96%), Positives = 110/114 (96%), Gaps = 0/114 (0%)
Query 252 AAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPS 311
AAEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPS
Sbjct 9 AAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPS 68
Query 312 ASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
ASAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 69 ASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 122
>6wzq_A A Nucleoprotein
Length=137
Score = 231 bits (589), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 109/114 (96%), Positives = 110/114 (96%), Gaps = 0/114 (0%)
Query 252 AAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPS 311
AAEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPS
Sbjct 24 AAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPS 83
Query 312 ASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
ASAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 84 ASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 137
>6wzq_B B Nucleoprotein
Length=137
Score = 231 bits (589), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 109/114 (96%), Positives = 110/114 (96%), Gaps = 0/114 (0%)
Query 252 AAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPS 311
AAEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPS
Sbjct 24 AAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPS 83
Query 312 ASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
ASAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 84 ASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 137
>6wkp_B B Nucleoprotein
Length=128
Score = 230 bits (587), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 108/126 (86%), Positives = 113/126 (90%), Gaps = 0/126 (0%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATR K+LSPR
Sbjct 3 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRXXXXXXXXXKDLSPR 62
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTL
Sbjct 63 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 122
Query 169 PKGFYA 174
PKGFYA
Sbjct 123 PKGFYA 128
>7c22_B B Nucleoprotein
Length=120
Score = 229 bits (584), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 108/113 (96%), Positives = 109/113 (96%), Gaps = 0/113 (0%)
Query 253 AEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSA 312
AEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSA
Sbjct 8 AEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSA 67
Query 313 SAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
SAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 68 SAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 120
>7ylb_H H Nucleoprotein
Length=122
Score = 229 bits (584), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 108/113 (96%), Positives = 109/113 (96%), Gaps = 0/113 (0%)
Query 253 AEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSA 312
AEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSA
Sbjct 10 AEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSA 69
Query 313 SAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
SAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 70 SAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 122
>7vnu_D D Nucleoprotein
Length=131
Score = 229 bits (585), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 114/127 (90%), Positives = 120/127 (94%), Gaps = 0/127 (0%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+R GKMK+LSPR
Sbjct 5 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRXXXGKMKDLSPR 64
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTL
Sbjct 65 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 124
Query 169 PKGFYAE 175
PKGFYAE
Sbjct 125 PKGFYAE 131
>7o36_C C Nucleoprotein
Length=136
Score = 229 bits (584), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 108/113 (96%), Positives = 109/113 (96%), Gaps = 0/113 (0%)
Query 253 AEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSA 312
AEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSA
Sbjct 24 AEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSA 83
Query 313 SAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
SAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 84 SAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>7c22_C C Nucleoprotein
Length=120
Score = 228 bits (580), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 107/112 (96%), Positives = 108/112 (96%), Gaps = 0/112 (0%)
Query 254 EASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSAS 313
EASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSAS
Sbjct 9 EASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSAS 68
Query 314 AFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
AFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 69 AFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 120
>7o36_A A Nucleoprotein
Length=136
Score = 228 bits (580), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 107/112 (96%), Positives = 108/112 (96%), Gaps = 0/112 (0%)
Query 254 EASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSAS 313
EASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSAS
Sbjct 25 EASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSAS 84
Query 314 AFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
AFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 85 AFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>7sue_L K Nucleoprotein
Length=130
Score = 226 bits (577), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 106/126 (84%), Positives = 111/126 (88%), Gaps = 0/126 (0%)
Query 48 NNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSP 107
NNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRAT +LSP
Sbjct 4 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATXXXXXXXXXXXDLSP 63
Query 108 RWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTT 167
RWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTT
Sbjct 64 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 123
Query 168 LPKGFY 173
LPKGFY
Sbjct 124 LPKGFY 129
>7sue_F D Nucleoprotein
Length=130
Score = 226 bits (577), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 106/126 (84%), Positives = 111/126 (88%), Gaps = 0/126 (0%)
Query 48 NNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSP 107
NNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRAT +LSP
Sbjct 4 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATXXXXXXXXXXXDLSP 63
Query 108 RWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTT 167
RWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTT
Sbjct 64 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 123
Query 168 LPKGFY 173
LPKGFY
Sbjct 124 LPKGFY 129
>7sue_E C Nucleoprotein
Length=130
Score = 226 bits (577), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 106/126 (84%), Positives = 111/126 (88%), Gaps = 0/126 (0%)
Query 48 NNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSP 107
NNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRAT +LSP
Sbjct 4 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATXXXXXXXXXXXDLSP 63
Query 108 RWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTT 167
RWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTT
Sbjct 64 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 123
Query 168 LPKGFY 173
LPKGFY
Sbjct 124 LPKGFY 129
>6wkp_D D Nucleoprotein
Length=128
Score = 226 bits (577), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 106/125 (85%), Positives = 111/125 (89%), Gaps = 0/125 (0%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
TASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATR +LSPRW
Sbjct 4 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRXXXXXXXXXXDLSPRW 63
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLP
Sbjct 64 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 123
Query 170 KGFYA 174
KGFYA
Sbjct 124 KGFYA 128
>6wzo_B B Nucleoprotein
Length=121
Score = 225 bits (574), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 106/111 (95%), Positives = 107/111 (96%), Gaps = 0/111 (0%)
Query 255 ASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASA 314
ASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASA
Sbjct 11 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 70
Query 315 FFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 71 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 121
>7ylb_E B Nucleoprotein
Length=122
Score = 225 bits (574), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 106/111 (95%), Positives = 107/111 (96%), Gaps = 0/111 (0%)
Query 255 ASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASA 314
ASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASA
Sbjct 12 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 71
Query 315 FFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 72 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 122
>7r98_C C Nucleoprotein
Length=127
Score = 225 bits (574), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 106/126 (84%), Positives = 110/126 (87%), Gaps = 0/126 (0%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
TASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATR SPRW
Sbjct 2 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRXXXXXXXXXXXXSPRW 61
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLP
Sbjct 62 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 121
Query 170 KGFYAE 175
KGFYAE
Sbjct 122 KGFYAE 127
>7sue_K J Nucleoprotein
Length=130
Score = 225 bits (574), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 106/126 (84%), Positives = 110/126 (87%), Gaps = 0/126 (0%)
Query 48 NNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSP 107
NNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATR SP
Sbjct 4 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRXXXXXXXXXXXXSP 63
Query 108 RWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTT 167
RWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTT
Sbjct 64 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 123
Query 168 LPKGFY 173
LPKGFY
Sbjct 124 LPKGFY 129
>7o05_D D Nucleoprotein
Length=136
Score = 225 bits (574), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 106/111 (95%), Positives = 107/111 (96%), Gaps = 0/111 (0%)
Query 255 ASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASA 314
ASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASA
Sbjct 26 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 85
Query 315 FFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 86 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>7o05_C C Nucleoprotein
Length=136
Score = 225 bits (574), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 106/111 (95%), Positives = 107/111 (96%), Gaps = 0/111 (0%)
Query 255 ASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASA 314
ASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASA
Sbjct 26 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 85
Query 315 FFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 86 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>7o35_C C Nucleoprotein
Length=136
Score = 225 bits (574), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 106/111 (95%), Positives = 107/111 (96%), Gaps = 0/111 (0%)
Query 255 ASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASA 314
ASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASA
Sbjct 26 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 85
Query 315 FFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 86 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>7o35_A A Nucleoprotein
Length=136
Score = 225 bits (574), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 106/111 (95%), Positives = 107/111 (96%), Gaps = 0/111 (0%)
Query 255 ASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASA 314
ASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASA
Sbjct 26 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 85
Query 315 FFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 86 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>7o36_D D Nucleoprotein
Length=136
Score = 225 bits (574), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 106/111 (95%), Positives = 107/111 (96%), Gaps = 0/111 (0%)
Query 255 ASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASA 314
ASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASA
Sbjct 26 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 85
Query 315 FFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 86 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>8x1h_D D Nucleoprotein
Length=134
Score = 225 bits (573), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 112/127 (88%), Positives = 118/127 (93%), Gaps = 0/127 (0%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+R MK+LSPR
Sbjct 7 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRXXXXXMKDLSPR 66
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTL
Sbjct 67 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 126
Query 169 PKGFYAE 175
PKGFYAE
Sbjct 127 PKGFYAE 133
>7uxx_F FFF Nucleoprotein
Length=114
Score = 223 bits (569), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 105/110 (95%), Positives = 106/110 (96%), Gaps = 0/110 (0%)
Query 256 SKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAF 315
SKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAF
Sbjct 5 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 64
Query 316 FGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 65 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7vbf_B B Nucleoprotein
Length=116
Score = 223 bits (569), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 105/110 (95%), Positives = 106/110 (96%), Gaps = 0/110 (0%)
Query 256 SKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAF 315
SKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAF
Sbjct 7 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 66
Query 316 FGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 67 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 116
>7ce0_A A Nucleoprotein
Length=116
Score = 223 bits (569), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 105/110 (95%), Positives = 106/110 (96%), Gaps = 0/110 (0%)
Query 256 SKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAF 315
SKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAF
Sbjct 7 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 66
Query 316 FGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 67 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 116
>7ce0_D D Nucleoprotein
Length=116
Score = 223 bits (569), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 105/110 (95%), Positives = 106/110 (96%), Gaps = 0/110 (0%)
Query 256 SKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAF 315
SKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAF
Sbjct 7 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 66
Query 316 FGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 67 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 116
>7ce0_B B Nucleoprotein
Length=116
Score = 223 bits (569), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 105/110 (95%), Positives = 106/110 (96%), Gaps = 0/110 (0%)
Query 256 SKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAF 315
SKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAF
Sbjct 7 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 66
Query 316 FGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 67 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 116
>7ce0_C C Nucleoprotein
Length=116
Score = 223 bits (569), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 105/110 (95%), Positives = 106/110 (96%), Gaps = 0/110 (0%)
Query 256 SKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAF 315
SKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAF
Sbjct 7 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 66
Query 316 FGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 67 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 116
>7vbf_A A Nucleoprotein
Length=116
Score = 223 bits (569), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 105/110 (95%), Positives = 106/110 (96%), Gaps = 0/110 (0%)
Query 256 SKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAF 315
SKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAF
Sbjct 7 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 66
Query 316 FGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 67 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 116
>6wzo_D D Nucleoprotein
Length=121
Score = 223 bits (569), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 105/110 (95%), Positives = 106/110 (96%), Gaps = 0/110 (0%)
Query 256 SKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAF 315
SKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAF
Sbjct 12 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 71
Query 316 FGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 72 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 121
>7ylb_K K Nucleoprotein
Length=122
Score = 223 bits (569), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 105/110 (95%), Positives = 106/110 (96%), Gaps = 0/110 (0%)
Query 256 SKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAF 315
SKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAF
Sbjct 13 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 72
Query 316 FGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 73 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 122
>7ylb_D A Nucleoprotein
Length=122
Score = 223 bits (569), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 105/110 (95%), Positives = 106/110 (96%), Gaps = 0/110 (0%)
Query 256 SKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAF 315
SKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAF
Sbjct 13 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 72
Query 316 FGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
FGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 73 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 122
>7ylb_J J Nucleoprotein
Length=122
Score = 223 bits (568), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 105/110 (95%), Positives = 106/110 (96%), Gaps = 0/110 (0%)
Query 255 ASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASA 314
ASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASA
Sbjct 12 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 71
Query 315 FFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTF 364
FFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTF
Sbjct 72 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF 121
>7r98_A A Nucleoprotein
Length=127
Score = 223 bits (567), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 110/126 (87%), Positives = 115/126 (91%), Gaps = 0/126 (0%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
TASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR MK+LSPRW
Sbjct 2 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRXXXXXXXMKDLSPRW 61
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLP
Sbjct 62 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 121
Query 170 KGFYAE 175
KGFYAE
Sbjct 122 KGFYAE 127
>7xx1_D D Nucleoprotein
Length=125
Score = 223 bits (567), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 110/125 (88%), Positives = 115/125 (92%), Gaps = 0/125 (0%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
TASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR KMK+LSPRW
Sbjct 1 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRXXXXXXKMKDLSPRW 60
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLP
Sbjct 61 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 120
Query 170 KGFYA 174
KGFYA
Sbjct 121 KGFYA 125
>6m3m_A A Nucleoprotein
Length=136
Score = 223 bits (567), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 111/126 (88%), Positives = 117/126 (93%), Gaps = 0/126 (0%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+R MK+LSPR
Sbjct 10 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRXXXXXMKDLSPR 69
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTL
Sbjct 70 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 129
Query 169 PKGFYA 174
PKGFYA
Sbjct 130 PKGFYA 135
>7vbd_C C Nucleoprotein
Length=127
Score = 222 bits (566), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 104/122 (85%), Positives = 109/122 (89%), Gaps = 0/122 (0%)
Query 51 ASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRWY 110
ASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATR K+LSPRWY
Sbjct 3 ASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRXXXXXXXXXKDLSPRWY 62
Query 111 FYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLPK 170
FYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLPK
Sbjct 63 FYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPK 122
Query 171 GF 172
GF
Sbjct 123 GF 124
>7uxx_A AAA Nucleoprotein
Length=114
Score = 221 bits (564), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 6 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 65
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 66 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7uxx_D DDD Nucleoprotein
Length=114
Score = 221 bits (564), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 6 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 65
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 66 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7uxz_D DDD Nucleoprotein
Length=114
Score = 221 bits (564), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 6 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 65
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 66 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7uxz_A AAA Nucleoprotein
Length=114
Score = 221 bits (564), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 6 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 65
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 66 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7uxx_E EEE Nucleoprotein
Length=114
Score = 221 bits (564), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 6 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 65
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 66 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7uxx_C CCC Nucleoprotein
Length=114
Score = 221 bits (564), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 6 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 65
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 66 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7uxx_B BBB Nucleoprotein
Length=114
Score = 221 bits (564), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 6 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 65
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 66 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7uxz_F FFF Nucleoprotein
Length=114
Score = 221 bits (564), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 6 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 65
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 66 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7uxz_E EEE Nucleoprotein
Length=114
Score = 221 bits (564), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 6 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 65
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 66 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7uxz_C CCC Nucleoprotein
Length=114
Score = 221 bits (564), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 6 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 65
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 66 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7uxz_B BBB Nucleoprotein
Length=114
Score = 221 bits (564), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 6 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 65
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 66 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7c22_A A Nucleoprotein
Length=120
Score = 221 bits (564), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 12 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 71
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 72 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 120
>7xxk_E E Nucleoprotein
Length=120
Score = 221 bits (564), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 12 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 71
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 72 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 120
>7xxk_D D Nucleoprotein
Length=120
Score = 221 bits (564), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 12 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 71
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 72 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 120
>7xxk_A A Nucleoprotein
Length=120
Score = 221 bits (564), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 12 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 71
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 72 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 120
>7ylb_G G Nucleoprotein
Length=122
Score = 221 bits (563), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 256 SKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAF 315
SKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAF
Sbjct 13 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 72
Query 316 FGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTF 364
FGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTF
Sbjct 73 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF 121
>7o05_A A Nucleoprotein
Length=136
Score = 221 bits (564), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 28 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 87
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 88 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>7o36_B B Nucleoprotein
Length=136
Score = 221 bits (564), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 28 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 87
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 88 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>7o35_D D Nucleoprotein
Length=136
Score = 221 bits (564), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 28 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 87
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 88 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>7o05_B B Nucleoprotein
Length=136
Score = 221 bits (564), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 28 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 87
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 88 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>7vbe_A A Nucleoprotein
Length=108
Score = 220 bits (560), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 103/108 (95%), Positives = 104/108 (96%), Gaps = 0/108 (0%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
KPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 1 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 60
Query 318 MSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
MSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 61 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 108
>7de1_A A Nucleoprotein
Length=115
Score = 220 bits (560), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 103/108 (95%), Positives = 104/108 (96%), Gaps = 0/108 (0%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
KPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 8 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 67
Query 318 MSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
MSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 68 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 115
>7c22_D D Nucleoprotein
Length=120
Score = 220 bits (560), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 103/108 (95%), Positives = 104/108 (96%), Gaps = 0/108 (0%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
KPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 13 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 72
Query 318 MSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
MSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 73 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 120
>6wji_A A Nucleoprotein
Length=121
Score = 220 bits (560), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 103/108 (95%), Positives = 104/108 (96%), Gaps = 0/108 (0%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
KPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 14 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 73
Query 318 MSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
MSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 74 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 121
>6wzo_C C Nucleoprotein
Length=121
Score = 220 bits (560), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 103/108 (95%), Positives = 104/108 (96%), Gaps = 0/108 (0%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
KPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 14 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 73
Query 318 MSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
MSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 74 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 121
>6wzo_A A Nucleoprotein
Length=121
Score = 220 bits (560), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 103/108 (95%), Positives = 104/108 (96%), Gaps = 0/108 (0%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
KPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 14 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 73
Query 318 MSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
MSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 74 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 121
>6wji_F F Nucleoprotein
Length=121
Score = 220 bits (560), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 103/108 (95%), Positives = 104/108 (96%), Gaps = 0/108 (0%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
KPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 14 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 73
Query 318 MSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
MSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 74 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 121
>6wji_E E Nucleoprotein
Length=121
Score = 220 bits (560), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 103/108 (95%), Positives = 104/108 (96%), Gaps = 0/108 (0%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
KPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 14 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 73
Query 318 MSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
MSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 74 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 121
>6wji_D D Nucleoprotein
Length=121
Score = 220 bits (560), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 103/108 (95%), Positives = 104/108 (96%), Gaps = 0/108 (0%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
KPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 14 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 73
Query 318 MSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
MSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 74 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 121
>6wji_C C Nucleoprotein
Length=121
Score = 220 bits (560), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 103/108 (95%), Positives = 104/108 (96%), Gaps = 0/108 (0%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
KPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 14 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 73
Query 318 MSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
MSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 74 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 121
>6wji_B B Nucleoprotein
Length=121
Score = 220 bits (560), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 103/108 (95%), Positives = 104/108 (96%), Gaps = 0/108 (0%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
KPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 14 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 73
Query 318 MSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
MSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 74 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 121
>7xwz_A A Nucleoprotein
Length=125
Score = 220 bits (560), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 103/124 (83%), Positives = 108/124 (87%), Gaps = 0/124 (0%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRA +LSPR
Sbjct 1 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRAXXXXXXXXXXXXDLSPR 60
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTL
Sbjct 61 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 120
Query 169 PKGF 172
PKGF
Sbjct 121 PKGF 124
>7vbd_D D Nucleoprotein
Length=127
Score = 220 bits (560), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 109/126 (87%), Positives = 114/126 (90%), Gaps = 0/126 (0%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
TASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR K+LSPRW
Sbjct 2 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRXXXXXXXXKDLSPRW 61
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLP
Sbjct 62 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 121
Query 170 KGFYAE 175
KGFYAE
Sbjct 122 KGFYAE 127
>7ylb_A C Nucleoprotein
Length=122
Score = 219 bits (559), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 103/108 (95%), Positives = 104/108 (96%), Gaps = 0/108 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 14 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 73
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTF 364
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTF
Sbjct 74 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF 121
>7sts_C C Nucleoprotein
Length=130
Score = 219 bits (558), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 103/125 (82%), Positives = 107/125 (86%), Gaps = 0/125 (0%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
TASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRR LSPRW
Sbjct 6 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRXXXXXXXXXXXXXXLSPRW 65
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLP
Sbjct 66 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 125
Query 170 KGFYA 174
KGFYA
Sbjct 126 KGFYA 130
>7vbe_B B Nucleoprotein
Length=108
Score = 218 bits (554), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 102/107 (95%), Positives = 103/107 (96%), Gaps = 0/107 (0%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
KPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 1 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 60
Query 318 MSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTF 364
MSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTF
Sbjct 61 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF 107
>7xxk_B B Nucleoprotein
Length=120
Score = 218 bits (555), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 102/107 (95%), Positives = 103/107 (96%), Gaps = 0/107 (0%)
Query 259 PRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGM 318
PRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFGM
Sbjct 14 PRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGM 73
Query 319 SRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
SRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 74 SRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 120
>7xxk_C C Nucleoprotein
Length=120
Score = 218 bits (554), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 102/107 (95%), Positives = 103/107 (96%), Gaps = 0/107 (0%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
KPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 13 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 72
Query 318 MSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTF 364
MSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTF
Sbjct 73 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF 119
>7xxk_F F Nucleoprotein
Length=120
Score = 218 bits (554), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 102/107 (95%), Positives = 103/107 (96%), Gaps = 0/107 (0%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
KPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 13 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 72
Query 318 MSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTF 364
MSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTF
Sbjct 73 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF 119
>7f2e_G G Nucleoprotein
Length=108
Score = 217 bits (552), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 102/107 (95%), Positives = 103/107 (96%), Gaps = 0/107 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 2 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 61
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKT 363
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKT
Sbjct 62 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 108
>7f2e_D D Nucleoprotein
Length=108
Score = 217 bits (552), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 102/107 (95%), Positives = 103/107 (96%), Gaps = 0/107 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 2 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 61
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKT 363
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKT
Sbjct 62 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 108
>7f2e_C C Nucleoprotein
Length=108
Score = 217 bits (552), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 102/107 (95%), Positives = 103/107 (96%), Gaps = 0/107 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 2 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 61
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKT 363
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKT
Sbjct 62 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 108
>7f2e_I I Nucleoprotein
Length=108
Score = 217 bits (552), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 102/107 (95%), Positives = 103/107 (96%), Gaps = 0/107 (0%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 2 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 61
Query 317 GMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKT 363
GMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKT
Sbjct 62 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 108
>7r98_B B Nucleoprotein
Length=127
Score = 217 bits (552), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 108/126 (86%), Positives = 112/126 (89%), Gaps = 0/126 (0%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
TASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR LSPRW
Sbjct 2 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRXXXXXXXXXXLSPRW 61
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLP
Sbjct 62 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 121
Query 170 KGFYAE 175
KGFYAE
Sbjct 122 KGFYAE 127
>7n3d_C C Nucleoprotein
Length=130
Score = 216 bits (551), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 102/123 (83%), Positives = 106/123 (86%), Gaps = 0/123 (0%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
TASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRAT SPRW
Sbjct 6 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATXXXXXXXXXXXXXSPRW 65
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLP
Sbjct 66 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 125
Query 170 KGF 172
KGF
Sbjct 126 KGF 128
>7f2b_B A Nucleoprotein
Length=106
Score = 215 bits (548), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 101/106 (95%), Positives = 102/106 (96%), Gaps = 0/106 (0%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
KPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 1 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 60
Query 318 MSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKT 363
MSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKT
Sbjct 61 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 106
>7f2b_A B Nucleoprotein
Length=106
Score = 215 bits (548), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 101/106 (95%), Positives = 102/106 (96%), Gaps = 0/106 (0%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
KPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 1 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 60
Query 318 MSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKT 363
MSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKT
Sbjct 61 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 106
>7f2e_A B Nucleoprotein
Length=108
Score = 215 bits (548), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 101/106 (95%), Positives = 102/106 (96%), Gaps = 0/106 (0%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
KPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 3 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 62
Query 318 MSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKT 363
MSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKT
Sbjct 63 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 108
>7f2e_J J Nucleoprotein
Length=108
Score = 215 bits (548), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 101/106 (95%), Positives = 102/106 (96%), Gaps = 0/106 (0%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
KPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 3 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 62
Query 318 MSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKT 363
MSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKT
Sbjct 63 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 108
>7f2e_H H Nucleoprotein
Length=108
Score = 215 bits (548), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 101/106 (95%), Positives = 102/106 (96%), Gaps = 0/106 (0%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
KPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 3 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 62
Query 318 MSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKT 363
MSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKT
Sbjct 63 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 108
>7f2e_B A Nucleoprotein
Length=108
Score = 215 bits (548), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 101/106 (95%), Positives = 102/106 (96%), Gaps = 0/106 (0%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
KPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 3 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 62
Query 318 MSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKT 363
MSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKT
Sbjct 63 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 108
>7vbd_B B Nucleoprotein
Length=127
Score = 214 bits (545), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 107/124 (86%), Positives = 113/124 (91%), Gaps = 0/124 (0%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+R MK+LSPR
Sbjct 1 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRXXXXXMKDLSPR 60
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLP TTL
Sbjct 61 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPXXTTL 120
Query 169 PKGF 172
PKGF
Sbjct 121 PKGF 124
>7uw3_D D Nucleoprotein
Length=136
Score = 214 bits (544), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 100/125 (80%), Positives = 106/125 (85%), Gaps = 0/125 (0%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
TASWFTALT +L+FPRGQGVPINTNS PDDQIGYYRRATRR+RG K+LSPRW
Sbjct 11 TASWFTALTXXXXXDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGXXXXXKDLSPRW 70
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLP P
Sbjct 71 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPXXXXXP 130
Query 170 KGFYA 174
KGFYA
Sbjct 131 KGFYA 135
>2gib_A A Nucleocapsid protein
Length=103
Score = 210 bits (534), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%)
Query 270 NVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 329
NVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 3 NVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 62
Query 330 TWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPP 366
TWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPP
Sbjct 63 TWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPP 99
>2gib_B B Nucleocapsid protein
Length=103
Score = 208 bits (529), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 96/96 (100%), Positives = 96/96 (100%), Gaps = 0/96 (0%)
Query 274 AFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLT 333
AFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLT
Sbjct 7 AFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLT 66
Query 334 YHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEP 369
YHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEP
Sbjct 67 YHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEP 102
>7xwx_A A Nucleoprotein
Length=100
Score = 204 bits (520), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 95/99 (96%), Positives = 96/99 (97%), Gaps = 0/99 (0%)
Query 270 NVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 329
NVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 2 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 61
Query 330 TWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTE 368
TWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFPPTE
Sbjct 62 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFPPTE 100
>7xwx_B B Nucleoprotein
Length=100
Score = 202 bits (513), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 94/98 (96%), Positives = 95/98 (97%), Gaps = 0/98 (0%)
Query 270 NVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 329
NVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 2 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 61
Query 330 TWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPT 367
TWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFPPT
Sbjct 62 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFPPT 99
>7xwx_G G Nucleoprotein
Length=100
Score = 202 bits (513), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 94/98 (96%), Positives = 95/98 (97%), Gaps = 0/98 (0%)
Query 270 NVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 329
NVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 2 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 61
Query 330 TWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPT 367
TWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFPPT
Sbjct 62 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFPPT 99
>7xwx_C C Nucleoprotein
Length=100
Score = 202 bits (513), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 94/98 (96%), Positives = 95/98 (97%), Gaps = 0/98 (0%)
Query 270 NVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 329
NVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 2 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 61
Query 330 TWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPT 367
TWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFPPT
Sbjct 62 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFPPT 99
>6wkp_A A Nucleoprotein
Length=128
Score = 202 bits (515), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 96/124 (77%), Positives = 100/124 (81%), Gaps = 0/124 (0%)
Query 51 ASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRWY 110
ASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRA PRWY
Sbjct 5 ASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRAXXXXXXXXXXXXXXXPRWY 64
Query 111 FYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLPK 170
FYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTR A VLQLPQGTTLPK
Sbjct 65 FYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRXXXXXXAIVLQLPQGTTLPK 124
Query 171 GFYA 174
GFYA
Sbjct 125 GFYA 128
>7n0i_A A Nucleoprotein
Length=96
Score = 198 bits (503), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 92/96 (96%), Positives = 93/96 (97%), Gaps = 0/96 (0%)
Query 270 NVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 329
NVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 1 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 60
Query 330 TWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
TWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 61 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 96
>7n0i_B B Nucleoprotein
Length=96
Score = 198 bits (503), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 92/96 (96%), Positives = 93/96 (97%), Gaps = 0/96 (0%)
Query 270 NVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 329
NVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 1 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 60
Query 330 TWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
TWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 61 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 96
>7n0i_L G Nucleoprotein
Length=96
Score = 198 bits (503), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 92/96 (96%), Positives = 93/96 (97%), Gaps = 0/96 (0%)
Query 270 NVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 329
NVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 1 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 60
Query 330 TWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
TWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 61 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 96
>7n0i_G H Nucleoprotein
Length=96
Score = 198 bits (503), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 92/96 (96%), Positives = 93/96 (97%), Gaps = 0/96 (0%)
Query 270 NVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 329
NVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 1 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 60
Query 330 TWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
TWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 61 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 96
>7n0i_F F Nucleoprotein
Length=96
Score = 198 bits (503), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 92/96 (96%), Positives = 93/96 (97%), Gaps = 0/96 (0%)
Query 270 NVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 329
NVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 1 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 60
Query 330 TWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
TWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 61 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 96
>7n0i_E E Nucleoprotein
Length=96
Score = 198 bits (503), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 92/96 (96%), Positives = 93/96 (97%), Gaps = 0/96 (0%)
Query 270 NVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 329
NVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 1 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 60
Query 330 TWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
TWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 61 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 96
>7n0i_D D Nucleoprotein
Length=96
Score = 198 bits (503), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 92/96 (96%), Positives = 93/96 (97%), Gaps = 0/96 (0%)
Query 270 NVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 329
NVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 1 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 60
Query 330 TWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
TWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 61 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 96
>7n0i_C C Nucleoprotein
Length=96
Score = 198 bits (503), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 92/96 (96%), Positives = 93/96 (97%), Gaps = 0/96 (0%)
Query 270 NVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 329
NVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 1 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 60
Query 330 TWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
TWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 61 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 96
>7xwx_F F Nucleoprotein
Length=100
Score = 198 bits (503), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 92/96 (96%), Positives = 93/96 (97%), Gaps = 0/96 (0%)
Query 270 NVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 329
NVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 2 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 61
Query 330 TWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
TWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 62 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 97
>7xwx_D D Nucleoprotein
Length=100
Score = 198 bits (503), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 92/96 (96%), Positives = 93/96 (97%), Gaps = 0/96 (0%)
Query 270 NVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 329
NVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 2 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 61
Query 330 TWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
TWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 62 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 97
>7f2e_E E Nucleoprotein
Length=108
Score = 196 bits (498), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 91/97 (94%), Positives = 92/97 (95%), Gaps = 0/97 (0%)
Query 267 KQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVT 326
K YNVTQ FGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVT
Sbjct 12 KAYNVTQXFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVT 71
Query 327 PSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKT 363
PSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKT
Sbjct 72 PSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 108
>7f2e_K K Nucleoprotein
Length=108
Score = 196 bits (498), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 91/97 (94%), Positives = 92/97 (95%), Gaps = 0/97 (0%)
Query 267 KQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVT 326
K YNVTQ FGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVT
Sbjct 12 KAYNVTQXFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVT 71
Query 327 PSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKT 363
PSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKT
Sbjct 72 PSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 108
>7f2e_F F Nucleoprotein
Length=108
Score = 195 bits (496), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 93/106 (88%), Positives = 94/106 (89%), Gaps = 0/106 (0%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
KPRQKR ATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQ DYKHWPQIAQFAPSASAFFG
Sbjct 3 KPRQKRXATKAYNVTQAFGRRGPEQTQGNFGDQELIRQXXDYKHWPQIAQFAPSASAFFG 62
Query 318 MSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKT 363
MSRIGMEVTPSGTWLTY GAIKLDDK VILLNKHIDAYKT
Sbjct 63 MSRIGMEVTPSGTWLTYTGAIKLDDKXXXXXXQVILLNKHIDAYKT 108
>7xwx_E E Nucleoprotein
Length=100
Score = 190 bits (483), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 88/92 (96%), Positives = 89/92 (97%), Gaps = 0/92 (0%)
Query 274 AFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLT 333
AFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLT
Sbjct 6 AFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLT 65
Query 334 YHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
Y GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 66 YTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 97
>7xwx_H H Nucleoprotein
Length=100
Score = 185 bits (470), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 86/90 (96%), Positives = 87/90 (97%), Gaps = 0/90 (0%)
Query 274 AFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLT 333
AFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLT
Sbjct 6 AFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLT 65
Query 334 YHGAIKLDDKDPQFKDNVILLNKHIDAYKT 363
Y GAIKLDDKDP FKD VILLNKHIDAYKT
Sbjct 66 YTGAIKLDDKDPNFKDQVILLNKHIDAYKT 95
>7f2e_L L Nucleoprotein
Length=108
Score = 184 bits (467), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 88/105 (84%), Positives = 89/105 (85%), Gaps = 0/105 (0%)
Query 259 PRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGM 318
PRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIR DYKHWPQIAQFAPSASAFFGM
Sbjct 4 PRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRXXXDYKHWPQIAQFAPSASAFFGM 63
Query 319 SRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKT 363
SRIGMEVTPSGTWLTY GAI D VILLNKHIDAYKT
Sbjct 64 SRIGMEVTPSGTWLTYTGAIXXXXXXXXXXDQVILLNKHIDAYKT 108
>4ud1_B B N PROTEIN
Length=164
Score = 160 bits (404), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 77/134 (57%), Positives = 96/134 (72%), Gaps = 2/134 (1%)
Query 42 RPQGLPNNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGK 101
+P+ PNNT SW+T LTQHGK L FP GQGVP+N NS P GY+RR R++ G+G
Sbjct 32 KPRAAPNNTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKINTGNG- 90
Query 102 MKELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQ 161
+K+L+PRWYFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q
Sbjct 91 IKQLAPRWYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQ 149
Query 162 LPQGTTLPKGFYAE 175
GT LPK F+ E
Sbjct 150 FAPGTKLPKNFHIE 163
>4ud1_A A N PROTEIN
Length=164
Score = 160 bits (404), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 77/134 (57%), Positives = 96/134 (72%), Gaps = 2/134 (1%)
Query 42 RPQGLPNNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGK 101
+P+ PNNT SW+T LTQHGK L FP GQGVP+N NS P GY+RR R++ G+G
Sbjct 32 KPRAAPNNTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKINTGNG- 90
Query 102 MKELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQ 161
+K+L+PRWYFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q
Sbjct 91 IKQLAPRWYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQ 149
Query 162 LPQGTTLPKGFYAE 175
GT LPK F+ E
Sbjct 150 FAPGTKLPKNFHIE 163
>4ud1_C C N PROTEIN
Length=164
Score = 160 bits (404), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 77/134 (57%), Positives = 96/134 (72%), Gaps = 2/134 (1%)
Query 42 RPQGLPNNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGK 101
+P+ PNNT SW+T LTQHGK L FP GQGVP+N NS P GY+RR R++ G+G
Sbjct 32 KPRAAPNNTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKINTGNG- 90
Query 102 MKELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQ 161
+K+L+PRWYFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q
Sbjct 91 IKQLAPRWYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQ 149
Query 162 LPQGTTLPKGFYAE 175
GT LPK F+ E
Sbjct 150 FAPGTKLPKNFHIE 163
>6lnn_B B Nucleoprotein
Length=130
Score = 155 bits (392), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 93/129 (72%), Gaps = 2/129 (2%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NT SW+T LTQHGK L FP GQGVP+N NS P GY+RR R++ G+G +K+L+PR
Sbjct 4 NTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKIXXGNG-IKQLAPR 62
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT L
Sbjct 63 WYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKL 121
Query 169 PKGFYAEGS 177
PK F+ EG+
Sbjct 122 PKNFHIEGT 130
>6lz8_C B Nucleoprotein
Length=130
Score = 155 bits (392), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 93/129 (72%), Gaps = 2/129 (2%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NT SW+T LTQHGK L FP GQGVP+N NS P GY+RR R++ G+G +K+L+PR
Sbjct 4 NTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKINTGNG-IKQLAPR 62
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT L
Sbjct 63 WYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKL 121
Query 169 PKGFYAEGS 177
PK F+ EG+
Sbjct 122 PKNFHIEGT 130
>6lz6_A A Nucleoprotein
Length=130
Score = 155 bits (392), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 93/129 (72%), Gaps = 2/129 (2%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NT SW+T LTQHGK L FP GQGVP+N NS P GY+RR R++ G+G +K+L+PR
Sbjct 4 NTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKINTGNG-IKQLAPR 62
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT L
Sbjct 63 WYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKL 121
Query 169 PKGFYAEGS 177
PK F+ EG+
Sbjct 122 PKNFHIEGT 130
>7dyd_B B Nucleoprotein
Length=130
Score = 155 bits (391), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 93/129 (72%), Gaps = 2/129 (2%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NT SW+T LTQHGK L FP GQGVP+N NS P GY+RR R++ G+G +K+L+PR
Sbjct 4 NTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKINTGNG-IKQLAPR 62
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT L
Sbjct 63 WYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKL 121
Query 169 PKGFYAEGS 177
PK F+ EG+
Sbjct 122 PKNFHIEGT 130
>6lz6_B B Nucleoprotein
Length=130
Score = 155 bits (391), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 93/129 (72%), Gaps = 2/129 (2%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NT SW+T LTQHGK L FP GQGVP+N NS P GY+RR R++ G+G +K+L+PR
Sbjct 4 NTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKINTGNG-IKQLAPR 62
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT L
Sbjct 63 WYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKL 121
Query 169 PKGFYAEGS 177
PK F+ EG+
Sbjct 122 PKNFHIEGT 130
>7dyd_A A Nucleoprotein
Length=130
Score = 154 bits (390), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 75/128 (59%), Positives = 92/128 (72%), Gaps = 2/128 (2%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NT SW+T LTQHGK L FP GQGVP+N NS P GY+RR R++ G+G +K+L+PR
Sbjct 4 NTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKINTGNG-IKQLAPR 62
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT L
Sbjct 63 WYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKL 121
Query 169 PKGFYAEG 176
PK F+ EG
Sbjct 122 PKNFHIEG 129
>6lz8_A A Nucleoprotein
Length=130
Score = 154 bits (388), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 75/128 (59%), Positives = 91/128 (71%), Gaps = 2/128 (2%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NT SW+T LTQHGK L FP GQGVP+N NS P GY+RR R++ G G +K+L+PR
Sbjct 4 NTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKINTGXG-IKQLAPR 62
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT L
Sbjct 63 WYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKL 121
Query 169 PKGFYAEG 176
PK F+ EG
Sbjct 122 PKNFHIEG 129
>6lnn_A A Nucleoprotein
Length=130
Score = 153 bits (386), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 74/129 (57%), Positives = 92/129 (71%), Gaps = 2/129 (2%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NT SW+T LTQHGK L FP GQGVP+N NS P GY+RR R++ +G +K+L+PR
Sbjct 4 NTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKINTXNG-IKQLAPR 62
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT L
Sbjct 63 WYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKL 121
Query 169 PKGFYAEGS 177
PK F+ EG+
Sbjct 122 PKNFHIEGT 130
>6kl5_B B Nucleoprotein
Length=144
Score = 148 bits (374), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 88/128 (69%), Gaps = 2/128 (2%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NT SW+T LTQHGK L FP GQGVP+N NS P GY+RR R++ K+L+PR
Sbjct 18 NTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKIXXXX-XXKQLAPR 76
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT L
Sbjct 77 WYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKL 135
Query 169 PKGFYAEG 176
PK F+ EG
Sbjct 136 PKNFHIEG 143
>6kl6_B B Nucleoprotein
Length=144
Score = 141 bits (355), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 70/126 (56%), Positives = 84/126 (67%), Gaps = 2/126 (2%)
Query 51 ASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRWY 110
SW+T LTQHGK L FP GQGVP+N NS P GY+RR R++ L+PRWY
Sbjct 20 VSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKIXXXX-XXXXLAPRWY 78
Query 111 FYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLPK 170
FYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT LPK
Sbjct 79 FYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLPK 137
Query 171 GFYAEG 176
F+ EG
Sbjct 138 NFHIEG 143
>6kl2_B B Nucleoprotein
Length=144
Score = 140 bits (353), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 84/128 (66%), Gaps = 2/128 (2%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NT SW+T LTQHGK L FP GQGVP+N NS P GY+RR +L+PR
Sbjct 18 NTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDXXXXXXX-XXXQLAPR 76
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT L
Sbjct 77 WYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKL 135
Query 169 PKGFYAEG 176
PK F+ EG
Sbjct 136 PKNFHIEG 143
>7dyd_C C Nucleoprotein
Length=130
Score = 139 bits (349), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 84/125 (67%), Gaps = 2/125 (2%)
Query 51 ASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRWY 110
SW+T LTQHGK L FP GQGVP+N NS P GY+RR G+G + + +PRWY
Sbjct 6 VSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQXXXXXXGNG-IXQXAPRWY 64
Query 111 FYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLPK 170
FYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT LPK
Sbjct 65 FYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLPK 123
Query 171 GFYAE 175
F+ E
Sbjct 124 NFHIE 128
>6kl6_A A Nucleoprotein
Length=144
Score = 138 bits (348), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 83/127 (65%), Gaps = 2/127 (2%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NT SW+T LTQH K L FP GQGVP+N NS P GY+RR R++ +L+PR
Sbjct 18 NTVSWYTGLTQHXKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKIX-XXXXXXQLAPR 76
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYY GTGPEA+LP+ A K+GIVWV A + P GTRNPNN++A V Q GT L
Sbjct 77 WYFYYTGTGPEAALPFRAVKDGIVWVHEXXATDAPST-FGTRNPNNDSAIVTQFAPGTKL 135
Query 169 PKGFYAE 175
PK F+ E
Sbjct 136 PKNFHIE 142
>6kl2_A A Nucleoprotein
Length=144
Score = 137 bits (344), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 70/128 (55%), Positives = 82/128 (64%), Gaps = 2/128 (2%)
Query 49 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 108
NT SW+T LTQH K L FP GQGVP+N NS P GY+RR L+PR
Sbjct 18 NTVSWYTGLTQHXKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDXXXXXXX-XXXXLAPR 76
Query 109 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
WYFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT L
Sbjct 77 WYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKL 135
Query 169 PKGFYAEG 176
PK F+ EG
Sbjct 136 PKNFHIEG 143
>6kl5_A A Nucleoprotein
Length=144
Score = 137 bits (344), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 82/125 (66%), Gaps = 2/125 (2%)
Query 51 ASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRWY 110
SW+T LTQHGK L FP GQGVP+N NS P GY+RR R +L+PRWY
Sbjct 20 VSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRXXXXXX-XXXQLAPRWY 78
Query 111 FYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLPK 170
FYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT LPK
Sbjct 79 FYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLPK 137
Query 171 GFYAE 175
F+ E
Sbjct 138 NFHIE 142
>6lnn_C C Nucleoprotein
Length=130
Score = 136 bits (342), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 69/126 (55%), Positives = 82/126 (65%), Gaps = 2/126 (2%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
T SW+T LTQHGK L FP GQGVP+N NS P GY+RR +L+PRW
Sbjct 5 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDXXXXXXX-XXXQLAPRW 63
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT LP
Sbjct 64 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 122
Query 170 KGFYAE 175
K F+ E
Sbjct 123 KNFHIE 128
>6lz6_C C Nucleoprotein
Length=130
Score = 136 bits (342), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 69/126 (55%), Positives = 82/126 (65%), Gaps = 2/126 (2%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
T SW+T LTQHGK L FP GQGVP+N NS P GY+RR +L+PRW
Sbjct 5 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDXXXXXXX-XXXQLAPRW 63
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT LP
Sbjct 64 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 122
Query 170 KGFYAE 175
K F+ E
Sbjct 123 KNFHIE 128
>6lz8_D D Nucleoprotein
Length=130
Score = 135 bits (339), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 81/127 (64%), Gaps = 2/127 (2%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
T SW+T LTQHGK L FP GQGVP+N NS P GY+RR +PRW
Sbjct 5 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQXXXXXXXX-XXXXXAPRW 63
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT LP
Sbjct 64 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 122
Query 170 KGFYAEG 176
K F+ EG
Sbjct 123 KNFHIEG 129
>6kl6_D D Nucleoprotein
Length=144
Score = 135 bits (340), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 81/127 (64%), Gaps = 2/127 (2%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
T SW+T LTQHGK L FP GQGVP+N NS P GY+RR +PRW
Sbjct 19 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRXXXXXXXXX-XXXXXAPRW 77
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT LP
Sbjct 78 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 136
Query 170 KGFYAEG 176
K F+ EG
Sbjct 137 KNFHIEG 143
>7dyd_D D Nucleoprotein
Length=130
Score = 133 bits (335), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 68/126 (54%), Positives = 80/126 (63%), Gaps = 2/126 (2%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
T SW+T LTQHGK L FP GQGVP+N NS P GY+R L+PRW
Sbjct 5 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRXXXXXXXXXX-XXXXLAPRW 63
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT LP
Sbjct 64 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 122
Query 170 KGFYAE 175
K F+ E
Sbjct 123 KNFHIE 128
>6lz8_B C Nucleoprotein
Length=130
Score = 133 bits (335), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 68/126 (54%), Positives = 80/126 (63%), Gaps = 2/126 (2%)
Query 51 ASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRWY 110
SW+T LTQHGK L FP GQGVP+N NS P GY+RR +PRWY
Sbjct 6 VSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRXXXXXXXXX-XXXXXAPRWY 64
Query 111 FYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLPK 170
FYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT LPK
Sbjct 65 FYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLPK 123
Query 171 GFYAEG 176
F+ EG
Sbjct 124 NFHIEG 129
>6lnn_D D Nucleoprotein
Length=130
Score = 133 bits (334), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/126 (54%), Positives = 80/126 (63%), Gaps = 2/126 (2%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
T SW+T LTQHGK L FP GQGVP+N NS P GY+RR +PRW
Sbjct 5 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQXXXXXXXX-XXXXXAPRW 63
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT LP
Sbjct 64 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 122
Query 170 KGFYAE 175
K F+ E
Sbjct 123 KNFHIE 128
>4ud1_D D N PROTEIN
Length=164
Score = 132 bits (333), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 68/126 (54%), Positives = 80/126 (63%), Gaps = 2/126 (2%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
T SW+T LTQHGK L FP GQGVP+N NS P GY+RR +PRW
Sbjct 40 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDXXXXXXX-XXXXXAPRW 98
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT LP
Sbjct 99 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 157
Query 170 KGFYAE 175
K F+ E
Sbjct 158 KNFHIE 163
>6kl6_C C Nucleoprotein
Length=144
Score = 132 bits (331), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 68/127 (54%), Positives = 79/127 (62%), Gaps = 2/127 (2%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
T SW+T LTQHGK L FP GQGVP+N NS P GY+RR PRW
Sbjct 19 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQXXXXXXXX-XXXXXXPRW 77
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT LP
Sbjct 78 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 136
Query 170 KGFYAEG 176
F+ EG
Sbjct 137 XXFHIEG 143
>6lz6_D D Nucleoprotein
Length=130
Score = 130 bits (328), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 79/126 (63%), Gaps = 2/126 (2%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
T SW+T LTQHGK L FP GQGVP+N NS P GY+RR +PRW
Sbjct 5 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQXXXXXXXXXXXXX-APRW 63
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYY GTGPEA+LP+ A K+ IVWV +GA + P GTRNPNN++A V Q GT LP
Sbjct 64 YFYYTGTGPEAALPFRAVKDXIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 122
Query 170 KGFYAE 175
K F+ E
Sbjct 123 KNFHIE 128
>4ud1_E E N PROTEIN
Length=164
Score = 129 bits (325), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 78/126 (62%), Gaps = 2/126 (2%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
T SW+T LTQHGK L FP GQGVP+N NS P GY+ R PRW
Sbjct 40 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWXRQDXXXXXXX-XXXXXXPRW 98
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT LP
Sbjct 99 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 157
Query 170 KGFYAE 175
K F+ E
Sbjct 158 KNFHIE 163
>6kl5_D D Nucleoprotein
Length=144
Score = 127 bits (320), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 66/121 (55%), Positives = 76/121 (63%), Gaps = 2/121 (2%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
T SW+T LTQHGK L FP GQGVP+N NS P GY+RR PRW
Sbjct 19 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQXXXXXXXX-XXXXXXPRW 77
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT LP
Sbjct 78 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 136
Query 170 K 170
K
Sbjct 137 K 137
>6kl2_D D Nucleoprotein
Length=144
Score = 125 bits (315), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 75/120 (63%), Gaps = 2/120 (2%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
T SW+T LTQHGK L FP GQGVP+N NS P GY+RR PRW
Sbjct 19 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQXXXXXXXX-XXXXXXPRW 77
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT LP
Sbjct 78 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 136
>6kl2_C C Nucleoprotein
Length=144
Score = 125 bits (315), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 75/120 (63%), Gaps = 2/120 (2%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
T SW+T LTQHGK L FP GQGVP+N NS P GY+RR PRW
Sbjct 19 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQXXXXXXXX-XXXXXXPRW 77
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT LP
Sbjct 78 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 136
>6kl5_C C Nucleoprotein
Length=144
Score = 123 bits (308), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 74/120 (62%), Gaps = 2/120 (2%)
Query 50 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRW 109
T SW+T LTQHGK L FP GQGVP+N NS P GY+RR RW
Sbjct 19 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQXXXXXXXXXXXXXXX-RW 77
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYY GTGPEA+LP+ A K+GIVWV +GA + P GTRNPNN++A V Q GT LP
Sbjct 78 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 136
>7n45_A A Nucleoprotein
Length=138
Score = 114 bits (284), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/129 (47%), Positives = 80/129 (62%), Gaps = 4/129 (3%)
Query 52 SWFTALTQHGK-EELRFPRGQGVPINTNSGPDDQIGYYRRATRR-VRGGDGKMKELSPRW 109
SWF+ +TQ K + +F GQGVPI P + GY+ R +RR + DG+ K+L PRW
Sbjct 8 SWFSGITQFQKGRDFKFSDGQGVPIAFGVPPSEAKGYWYRHSRRSFKTADGQQKQLLPRW 67
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGA-LNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
YFYYLGTGP A+ YG + EG+ WVA A +TP D + +R+P A + P GT L
Sbjct 68 YFYYLGTGPYANASYGESLEGVFWVANHQADTSTPSD-VSSRDPTTQEAIPTRFPPGTIL 126
Query 169 PKGFYAEGS 177
P+G+Y EGS
Sbjct 127 PQGYYVEGS 135
>3hd4_A A Nucleoprotein
Length=139
Score = 112 bits (280), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 77/128 (60%), Gaps = 2/128 (2%)
Query 52 SWFTALTQHGK-EELRFPRGQGVPINTNSGPDDQIGYYRRATRR-VRGGDGKMKELSPRW 109
SWF+ +TQ K +E +F GQGVPI +Q GY+ R RR + DG+ K+L PRW
Sbjct 9 SWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQKGYWYRHNRRSFKTPDGQQKQLLPRW 68
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 169
YFYYLGTGP A YG + EG+ WVA A + I R+P+++ A + GT LP
Sbjct 69 YFYYLGTGPHAGASYGDSIEGVFWVANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLP 128
Query 170 KGFYAEGS 177
+GFY EGS
Sbjct 129 QGFYVEGS 136
>4kxj_A A Nucleoprotein
Length=136
Score = 110 bits (275), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 60/129 (47%), Positives = 80/129 (62%), Gaps = 4/129 (3%)
Query 52 SWFTALTQHGK-EELRFPRGQGVPINTNSGPDDQIGYYRRATRR-VRGGDGKMKELSPRW 109
SWF+ +TQ K +E F GQGVPI + GY+ R RR + DG ++L PRW
Sbjct 9 SWFSGITQFQKGKEFEFVEGQGVPIAPGVPATEAKGYWYRHNRRSFKTADGXQRQLLPRW 68
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGA-LNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
YFYYLGTGP A YG + +G+ WVA+ A +NTP D I R+P+++ A + P GT L
Sbjct 69 YFYYLGTGPHAKDQYGTDIDGVYWVASNQADVNTPAD-IVDRDPSSDEAIPTRFPPGTVL 127
Query 169 PKGFYAEGS 177
P+G+Y EGS
Sbjct 128 PQGYYIEGS 136
>6g13_D D Nucleoprotein
Length=126
Score = 109 bits (273), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/114 (51%), Positives = 74/114 (65%), Gaps = 6/114 (5%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
K R KRT+TK +N+ QAFG RGP QGNFGD L + GT+ WPQIA+ AP+ASAF G
Sbjct 13 KMRHKRTSTKSFNMVQAFGLRGPGDLQGNFGDLQLNKLGTEDPRWPQIAELAPTASAFMG 72
Query 318 MSRIGM------EVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
MS+ + + +L Y GAIKLD K+P + + LL ++IDAYKTFP
Sbjct 73 MSQFKLTHQNNDDXGNPVYFLRYSGAIKLDPKNPNYNKWLELLEQNIDAYKTFP 126
>6g13_C C Nucleoprotein
Length=126
Score = 109 bits (272), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/114 (51%), Positives = 74/114 (65%), Gaps = 6/114 (5%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
K R KRT+TK +N+ QAFG RGP QGNFGD L + GT+ WPQIA+ AP+ASAF G
Sbjct 13 KMRHKRTSTKSFNMVQAFGLRGPGDLQGNFGDLQLNKLGTEDPRWPQIAELAPTASAFMG 72
Query 318 MSRIGM------EVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
MS+ + + +L Y GAIKLD K+P + + LL ++IDAYKTFP
Sbjct 73 MSQFKLTHQNNDDXGNPVYFLRYSGAIKLDPKNPNYNKWLELLEQNIDAYKTFP 126
>6g13_B B Nucleoprotein
Length=126
Score = 109 bits (272), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/114 (51%), Positives = 74/114 (65%), Gaps = 6/114 (5%)
Query 258 KPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFG 317
K R KRT+TK +N+ QAFG RGP QGNFGD L + GT+ WPQIA+ AP+ASAF G
Sbjct 13 KMRHKRTSTKSFNMVQAFGLRGPGDLQGNFGDLQLNKLGTEDPRWPQIAELAPTASAFMG 72
Query 318 MSRIGM------EVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
MS+ + + +L Y GAIKLD K+P + + LL ++IDAYKTFP
Sbjct 73 MSQFKLTHQNNDDXGNPVYFLRYSGAIKLDPKNPNYNKWLELLEQNIDAYKTFP 126
>4lmt_A A Nucleoprotein
Length=136
Score = 109 bits (272), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/129 (47%), Positives = 79/129 (61%), Gaps = 4/129 (3%)
Query 52 SWFTALTQHGK-EELRFPRGQGVPINTNSGPDDQIGYYRRATRR-VRGGDGKMKELSPRW 109
SWF+ +TQ K +E F GQGVPI + GY+ R RR + DG +L PRW
Sbjct 9 SWFSGITQFQKGKEFEFVEGQGVPIAPGVPATEAKGYWYRHNRRSFKTADGNXXQLLPRW 68
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGA-LNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
YFYYLGTGP A YG + +G+ WVA+ A +NTP D I R+P+++ A + P GT L
Sbjct 69 YFYYLGTGPHAKDQYGTDIDGVYWVASNQADVNTPAD-IVDRDPSSDEAIPTRFPPGTVL 127
Query 169 PKGFYAEGS 177
P+G+Y EGS
Sbjct 128 PQGYYIEGS 136
>4lm7_A A Nucleoprotein
Length=136
Score = 109 bits (272), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/129 (47%), Positives = 79/129 (61%), Gaps = 4/129 (3%)
Query 52 SWFTALTQHGK-EELRFPRGQGVPINTNSGPDDQIGYYRRATRR-VRGGDGKMKELSPRW 109
SWF+ +TQ K +E F GQGVPI + GY+ R RR + DG +L PRW
Sbjct 9 SWFSGITQFQKGKEFEFVEGQGVPIAPGVPATEAKGYWYRHNRRSFKTADGXXXQLLPRW 68
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGA-LNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
YFYYLGTGP A YG + +G+ WVA+ A +NTP D I R+P+++ A + P GT L
Sbjct 69 YFYYLGTGPHAKDQYGTDIDGVYWVASNQADVNTPAD-IVDRDPSSDEAIPTRFPPGTVL 127
Query 169 PKGFYAEGS 177
P+G+Y EGS
Sbjct 128 PQGYYIEGS 136
>4li4_A A Nucleoprotein
Length=136
Score = 109 bits (272), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/129 (47%), Positives = 79/129 (61%), Gaps = 4/129 (3%)
Query 52 SWFTALTQHGK-EELRFPRGQGVPINTNSGPDDQIGYYRRATRR-VRGGDGKMKELSPRW 109
SWF+ +TQ K +E F GQGVPI + GY+ R RR + DG +L PRW
Sbjct 9 SWFSGITQFQKGKEFEFVEGQGVPIAPGVPATEAKGYWYRHNRRSFKTADGXXXQLLPRW 68
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGA-LNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
YFYYLGTGP A YG + +G+ WVA+ A +NTP D I R+P+++ A + P GT L
Sbjct 69 YFYYLGTGPHAKDQYGTDIDGVYWVASNQADVNTPAD-IVDRDPSSDEAIPTRFPPGTVL 127
Query 169 PKGFYAEGS 177
P+G+Y EGS
Sbjct 128 PQGYYIEGS 136
>4j3k_A A Nucleoprotein
Length=136
Score = 109 bits (272), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/129 (47%), Positives = 79/129 (61%), Gaps = 4/129 (3%)
Query 52 SWFTALTQHGK-EELRFPRGQGVPINTNSGPDDQIGYYRRATRR-VRGGDGKMKELSPRW 109
SWF+ +TQ K +E F GQGVPI + GY+ R RR + DG +L PRW
Sbjct 9 SWFSGITQFQKGKEFEFVEGQGVPIAPGVPATEAKGYWYRHNRRSFKTADGXXXQLLPRW 68
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGA-LNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
YFYYLGTGP A YG + +G+ WVA+ A +NTP D I R+P+++ A + P GT L
Sbjct 69 YFYYLGTGPHAKDQYGTDIDGVYWVASNQADVNTPAD-IVDRDPSSDEAIPTRFPPGTVL 127
Query 169 PKGFYAEGS 177
P+G+Y EGS
Sbjct 128 PQGYYIEGS 136
>6g13_A A Nucleoprotein
Length=126
Score = 108 bits (270), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/112 (51%), Positives = 73/112 (65%), Gaps = 6/112 (5%)
Query 260 RQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMS 319
R KRT+TK +N+ QAFG RGP QGNFGD L + GT+ WPQIA+ AP+ASAF GMS
Sbjct 15 RHKRTSTKSFNMVQAFGLRGPGDLQGNFGDLQLNKLGTEDPRWPQIAELAPTASAFMGMS 74
Query 320 RIGM------EVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
+ + + +L Y GAIKLD K+P + + LL ++IDAYKTFP
Sbjct 75 QFKLTHQNNDDXGNPVYFLRYSGAIKLDPKNPNYNKWLELLEQNIDAYKTFP 126
>4lmc_A A Nucleoprotein
Length=135
Score = 107 bits (268), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 78/128 (61%), Gaps = 4/128 (3%)
Query 52 SWFTALTQHGK-EELRFPRGQGVPINTNSGPDDQIGYYRRATRR-VRGGDGKMKELSPRW 109
SWF+ +TQ K +E F GQGVPI + GY+ R RR + DG +L PRW
Sbjct 9 SWFSGITQFQKGKEFEFVEGQGVPIAPGVPATEAKGYWYRHNRRSFKTADGXXXQLLPRW 68
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGA-LNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
YFYYLGTGP A YG + +G+ WVA+ A +NTP D I R+P+++ A + P GT L
Sbjct 69 YFYYLGTGPHAKDQYGTDIDGVYWVASNQADVNTPAD-IVDRDPSSDEAIPTRFPPGTVL 127
Query 169 PKGFYAEG 176
P+G+Y EG
Sbjct 128 PQGYYIEG 135
>4lm9_A A Nucleoprotein
Length=135
Score = 107 bits (268), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 78/128 (61%), Gaps = 4/128 (3%)
Query 52 SWFTALTQHGK-EELRFPRGQGVPINTNSGPDDQIGYYRRATRR-VRGGDGKMKELSPRW 109
SWF+ +TQ K +E F GQGVPI + GY+ R RR + DG +L PRW
Sbjct 9 SWFSGITQFQKGKEFEFVEGQGVPIAPGVPATEAKGYWYRHNRRSFKTADGXXXQLLPRW 68
Query 110 YFYYLGTGPEASLPYGANKEGIVWVATEGA-LNTPKDHIGTRNPNNNAATVLQLPQGTTL 168
YFYYLGTGP A YG + +G+ WVA+ A +NTP D I R+P+++ A + P GT L
Sbjct 69 YFYYLGTGPHAKDQYGTDIDGVYWVASNQADVNTPAD-IVDRDPSSDEAIPTRFPPGTVL 127
Query 169 PKGFYAEG 176
P+G+Y EG
Sbjct 128 PQGYYIEG 135
>7pku_B B Nucleoprotein
Length=73
Score = 77.4 bits (189), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/73 (89%), Positives = 68/73 (93%), Gaps = 0/73 (0%)
Query 192 RGNSRNSTPGSSRGNSPARMASGGGETALALLLLDRLNQLESKVSGKGQQQQGQTVTKKS 251
R +SRNSTPGSSRG SPARMA GG+ ALALLLLDRLNQLESK+SGKGQQQQGQTVTKKS
Sbjct 1 RNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESKMSGKGQQQQGQTVTKKS 60
Query 252 AAEASKKPRQKRT 264
AAEASKKPRQKRT
Sbjct 61 AAEASKKPRQKRT 73
>2gec_A A Nucleocapsid protein
Length=139
Score = 77.8 bits (190), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/129 (39%), Positives = 70/129 (54%), Gaps = 8/129 (6%)
Query 41 RRPQGLPNNTASWFTALTQHGKEELRFPR----GQGVPINTNSGPDDQIGYYRRATRRVR 96
R P+ + ASWF A+ ++L P+ G GVP N N Q GY+RR R +
Sbjct 2 RPPKVGSSGNASWFQAIKA---KKLNSPQPKFEGSGVPDNENLKTSQQHGYWRRQAR-FK 57
Query 97 GGDGKMKELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNA 156
G G+ K + WYFYY GTGP A L +G +++GIVWVA +GA + + GTR+P+
Sbjct 58 PGKGRRKPVPDAWYFYYTGTGPAADLNWGDSQDGIVWVAAKGADVKSRSNQGTRDPDKFD 117
Query 157 ATVLQLPQG 165
L+ G
Sbjct 118 QYPLRFSDG 126
>2gec_B B Nucleocapsid protein
Length=139
Score = 77.8 bits (190), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/129 (39%), Positives = 70/129 (54%), Gaps = 8/129 (6%)
Query 41 RRPQGLPNNTASWFTALTQHGKEELRFPR----GQGVPINTNSGPDDQIGYYRRATRRVR 96
R P+ + ASWF A+ ++L P+ G GVP N N Q GY+RR R +
Sbjct 2 RPPKVGSSGNASWFQAIKA---KKLNSPQPKFEGSGVPDNENLKTSQQHGYWRRQAR-FK 57
Query 97 GGDGKMKELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNA 156
G G+ K + WYFYY GTGP A L +G +++GIVWVA +GA + + GTR+P+
Sbjct 58 PGKGRRKPVPDAWYFYYTGTGPAADLNWGDSQDGIVWVAAKGADVKSRSNQGTRDPDKFD 117
Query 157 ATVLQLPQG 165
L+ G
Sbjct 118 QYPLRFSDG 126
>2c86_A A NUCLEOCAPSID PROTEIN
Length=134
Score = 77.4 bits (189), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 63/119 (53%), Gaps = 8/119 (7%)
Query 51 ASWFTALTQHGKEELRFP----RGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELS 106
ASWF A+ ++L P G GVP N N P Q GY+RR R + G G +
Sbjct 7 ASWFQAIK---AKKLNTPPPKFEGSGVPDNENIKPSQQHGYWRRQAR-FKPGKGGRCPVP 62
Query 107 PRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQG 165
WYFYY GTGP A L +G ++GIVWVA +GA + + GTR+P+ L+ G
Sbjct 63 DAWYFYYTGTGPAADLNWGDTQDGIVWVAAKGADTKSRSNQGTRDPDKFDQYPLRFSDG 121
>2c86_B B NUCLEOCAPSID PROTEIN
Length=134
Score = 77.4 bits (189), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 63/119 (53%), Gaps = 8/119 (7%)
Query 51 ASWFTALTQHGKEELRFP----RGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELS 106
ASWF A+ ++L P G GVP N N P Q GY+RR R + G G +
Sbjct 7 ASWFQAIK---AKKLNTPPPKFEGSGVPDNENIKPSQQHGYWRRQAR-FKPGKGGRCPVP 62
Query 107 PRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQG 165
WYFYY GTGP A L +G ++GIVWVA +GA + + GTR+P+ L+ G
Sbjct 63 DAWYFYYTGTGPAADLNWGDTQDGIVWVAAKGADTKSRSNQGTRDPDKFDQYPLRFSDG 121
>2bxx_B B NUCLEOCAPSID PROTEIN
Length=134
Score = 77.4 bits (189), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 63/119 (53%), Gaps = 8/119 (7%)
Query 51 ASWFTALTQHGKEELRFP----RGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELS 106
ASWF A+ ++L P G GVP N N P Q GY+RR R + G G +
Sbjct 7 ASWFQAIK---AKKLNTPPPKFEGSGVPDNENIKPSQQHGYWRRQAR-FKPGKGGRCPVP 62
Query 107 PRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQG 165
WYFYY GTGP A L +G ++GIVWVA +GA + + GTR+P+ L+ G
Sbjct 63 DAWYFYYTGTGPAADLNWGDTQDGIVWVAAKGADTKSRSNQGTRDPDKFDQYPLRFSDG 121
>2bxx_A A NUCLEOCAPSID PROTEIN
Length=134
Score = 77.4 bits (189), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 63/119 (53%), Gaps = 8/119 (7%)
Query 51 ASWFTALTQHGKEELRFP----RGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELS 106
ASWF A+ ++L P G GVP N N P Q GY+RR R + G G +
Sbjct 7 ASWFQAIK---AKKLNTPPPKFEGSGVPDNENIKPSQQHGYWRRQAR-FKPGKGGRCPVP 62
Query 107 PRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQG 165
WYFYY GTGP A L +G ++GIVWVA +GA + + GTR+P+ L+ G
Sbjct 63 DAWYFYYTGTGPAADLNWGDTQDGIVWVAAKGADTKSRSNQGTRDPDKFDQYPLRFSDG 121
>2btl_B B INFECTIOUS BRONCHITIS VIRUS NUCLEOCAPSID PROTEIN
Length=134
Score = 75.9 bits (185), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 8/124 (6%)
Query 46 LPNNTASWFTALTQHGKEELRFP----RGQGVPINTNSGPDDQIGYYRRATRRVRGGDGK 101
+ + ASWF A+ ++L P G GVP N N P Q GY+RR R + G G
Sbjct 2 MSSGNASWFQAIK---AKKLNTPPPKFEGSGVPDNENMKPSQQHGYWRRQAR-FKPGKGG 57
Query 102 MKELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQ 161
+ WYFYY GTGP A + +G ++GIVW+A +GA + + GTR+P+ L+
Sbjct 58 RCPVPDAWYFYYTGTGPAADMNWGDTQDGIVWMAAKGADTKSRSNQGTRDPDKFDQYPLR 117
Query 162 LPQG 165
G
Sbjct 118 FSDG 121
>2btl_A A INFECTIOUS BRONCHITIS VIRUS NUCLEOCAPSID PROTEIN
Length=134
Score = 75.9 bits (185), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 8/124 (6%)
Query 46 LPNNTASWFTALTQHGKEELRFP----RGQGVPINTNSGPDDQIGYYRRATRRVRGGDGK 101
+ + ASWF A+ ++L P G GVP N N P Q GY+RR R + G G
Sbjct 2 MSSGNASWFQAIK---AKKLNTPPPKFEGSGVPDNENMKPSQQHGYWRRQAR-FKPGKGG 57
Query 102 MKELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQ 161
+ WYFYY GTGP A + +G ++GIVW+A +GA + + GTR+P+ L+
Sbjct 58 RCPVPDAWYFYYTGTGPAADMNWGDTQDGIVWMAAKGADTKSRSNQGTRDPDKFDQYPLR 117
Query 162 LPQG 165
G
Sbjct 118 FSDG 121
>5epw_B B Nucleoprotein
Length=130
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (54%), Gaps = 3/78 (4%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPR KR T++ NV Q FG P N GD DL++ G D K +PQ+A+ P+ +A F
Sbjct 22 KKPRWKRVPTREENVIQCFG---PRDFNHNMGDSDLVQNGVDAKGFPQLAELIPNQAALF 78
Query 317 GMSRIGMEVTPSGTWLTY 334
S + + +TY
Sbjct 79 FDSEVSTDEVGDNVQITY 96
>5epw_A A Nucleoprotein
Length=130
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (54%), Gaps = 3/78 (4%)
Query 257 KKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFF 316
KKPR KR T++ NV Q FG P N GD DL++ G D K +PQ+A+ P+ +A F
Sbjct 22 KKPRWKRVPTREENVIQCFG---PRDFNHNMGDSDLVQNGVDAKGFPQLAELIPNQAALF 78
Query 317 GMSRIGMEVTPSGTWLTY 334
S + + +TY
Sbjct 79 FDSEVSTDEVGDNVQITY 96
>5n4k_A A Nucleoprotein
Length=150
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (2%)
Query 82 DDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGA 139
D+QIGY+ R ++ +L P+ +FYYLGTGP L + +G+VWVA EGA
Sbjct 60 DEQIGYWNVQERWRMRRXXRV-DLPPKVHFYYLGTGPHKDLKFRQRSDGVVWVAKEGA 116
>5n4k_B B Nucleoprotein
Length=150
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/58 (45%), Positives = 34/58 (59%), Gaps = 1/58 (2%)
Query 82 DDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGA 139
D+QIGY+ R R +L P+ +FYYLGTGP L + +G+VWVA EGA
Sbjct 60 DEQIGYWN-VQERWRMRRXXRVDLPPKVHFYYLGTGPHKDLKFRQRSDGVVWVAKEGA 116
>2ge7_B B Nucleocapsid protein
Length=108
Score = 46.6 bits (109), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/104 (30%), Positives = 47/104 (45%), Gaps = 1/104 (1%)
Query 262 KRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRI 321
KRT Y V Q FG R + +GNFGD + +G + PS+ A SR+
Sbjct 4 KRTIPPGYKVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRV 62
Query 322 GMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
++ P G L + + DPQF + V + ++ +D T P
Sbjct 63 TPKLQPDGLHLKFEFTTVVPRDDPQFDNYVKICDQCVDGVGTRP 106
>2ge7_A A Nucleocapsid protein
Length=108
Score = 46.6 bits (109), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/104 (30%), Positives = 47/104 (45%), Gaps = 1/104 (1%)
Query 262 KRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRI 321
KRT Y V Q FG R + +GNFGD + +G + PS+ A SR+
Sbjct 4 KRTIPPGYKVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRV 62
Query 322 GMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
++ P G L + + DPQF + V + ++ +D T P
Sbjct 63 TPKLQPDGLHLKFEFTTVVPRDDPQFDNYVKICDQCVDGVGTRP 106
>2ge8_A A Nucleocapsid protein
Length=114
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/104 (30%), Positives = 47/104 (45%), Gaps = 1/104 (1%)
Query 262 KRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRI 321
KRT Y V Q FG R + +GNFGD + +G + PS+ A SR+
Sbjct 10 KRTIPPGYKVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRV 68
Query 322 GMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
++ P G L + + DPQF + V + ++ +D T P
Sbjct 69 TPKLQPDGLHLKFEFTTVVPRDDPQFDNYVKICDQCVDGVGTRP 112
>2ge8_C F Nucleocapsid protein
Length=114
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/104 (30%), Positives = 47/104 (45%), Gaps = 1/104 (1%)
Query 262 KRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRI 321
KRT Y V Q FG R + +GNFGD + +G + PS+ A SR+
Sbjct 10 KRTIPPGYKVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRV 68
Query 322 GMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
++ P G L + + DPQF + V + ++ +D T P
Sbjct 69 TPKLQPDGLHLKFEFTTVVPRDDPQFDNYVKICDQCVDGVGTRP 112
>2ge8_D G Nucleocapsid protein
Length=114
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/104 (30%), Positives = 47/104 (45%), Gaps = 1/104 (1%)
Query 262 KRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRI 321
KRT Y V Q FG R + +GNFGD + +G + PS+ A SR+
Sbjct 10 KRTIPPGYKVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRV 68
Query 322 GMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
++ P G L + + DPQF + V + ++ +D T P
Sbjct 69 TPKLQPDGLHLKFEFTTVVPRDDPQFDNYVKICDQCVDGVGTRP 112
>2ge8_G I Nucleocapsid protein
Length=114
Score = 46.6 bits (109), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/104 (30%), Positives = 47/104 (45%), Gaps = 1/104 (1%)
Query 262 KRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRI 321
KRT Y V Q FG R + +GNFGD + +G + PS+ A SR+
Sbjct 10 KRTIPPGYKVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRV 68
Query 322 GMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
++ P G L + + DPQF + V + ++ +D T P
Sbjct 69 TPKLQPDGLHLKFEFTTVVPRDDPQFDNYVKICDQCVDGVGTRP 112
>2ge8_H J Nucleocapsid protein
Length=114
Score = 46.6 bits (109), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/104 (30%), Positives = 47/104 (45%), Gaps = 1/104 (1%)
Query 262 KRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRI 321
KRT Y V Q FG R + +GNFGD + +G + PS+ A SR+
Sbjct 10 KRTIPPGYKVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRV 68
Query 322 GMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
++ P G L + + DPQF + V + ++ +D T P
Sbjct 69 TPKLQPDGLHLKFEFTTVVPRDDPQFDNYVKICDQCVDGVGTRP 112
>2ge8_F D Nucleocapsid protein
Length=114
Score = 46.6 bits (109), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/104 (30%), Positives = 47/104 (45%), Gaps = 1/104 (1%)
Query 262 KRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRI 321
KRT Y V Q FG R + +GNFGD + +G + PS+ A SR+
Sbjct 10 KRTIPPGYKVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRV 68
Query 322 GMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
++ P G L + + DPQF + V + ++ +D T P
Sbjct 69 TPKLQPDGLHLKFEFTTVVPRDDPQFDNYVKICDQCVDGVGTRP 112
>2ge8_B B Nucleocapsid protein
Length=114
Score = 46.6 bits (109), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/104 (30%), Positives = 47/104 (45%), Gaps = 1/104 (1%)
Query 262 KRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRI 321
KRT Y V Q FG R + +GNFGD + +G + PS+ A SR+
Sbjct 10 KRTIPPGYKVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRV 68
Query 322 GMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
++ P G L + + DPQF + V + ++ +D T P
Sbjct 69 TPKLQPDGLHLKFEFTTVVPRDDPQFDNYVKICDQCVDGVGTRP 112
>2ge8_E C Nucleocapsid protein
Length=114
Score = 46.6 bits (109), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/104 (30%), Positives = 47/104 (45%), Gaps = 1/104 (1%)
Query 262 KRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRI 321
KRT Y V Q FG R + +GNFGD + +G + PS+ A SR+
Sbjct 10 KRTIPPGYKVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRV 68
Query 322 GMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 365
++ P G L + + DPQF + V + ++ +D T P
Sbjct 69 TPKLQPDGLHLKFEFTTVVPRDDPQFDNYVKICDQCVDGVGTRP 112
>2ca1_A A NUCLEOCAPSID PROTEIN
Length=111
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/109 (28%), Positives = 48/109 (44%), Gaps = 1/109 (1%)
Query 252 AAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPS 311
A E + + KRT Y V Q FG R + +GNFGD + +G + PS
Sbjct 4 ADEMAHRRYCKRTIPPNYRVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPS 62
Query 312 ASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDA 360
+ A SR+ ++ G L + + DPQF + V + ++ +D
Sbjct 63 SHACLFGSRVTPKLQLDGLHLRFEFTTVVPCDDPQFDNYVKICDQCVDG 111
>2ca1_B B NUCLEOCAPSID PROTEIN
Length=111
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Query 262 KRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRI 321
KRT Y V Q FG R + +GNFGD + +G + PS+ A SR+
Sbjct 14 KRTIPPNYRVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRV 72
Query 322 GMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDA 360
++ G L + + DPQF + V + ++ +D
Sbjct 73 TPKLQLDGLHLRFEFTTVVPCDDPQFDNYVKICDQCVDG 111
>7v0m_A A Ankyrin-1
Length=1881
Score = 36.2 bits (82), Expect = 0.94, Method: Composition-based stats.
Identities = 32/104 (31%), Positives = 44/104 (42%), Gaps = 6/104 (6%)
Query 135 ATEGALNTPKDHIGTRNPNNNAATVL--QLPQGTTLPKGFYAEGSRGGSQASSRSSSR-- 190
T+G + P HI RN + A VL P L K + + +
Sbjct 167 GTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQLLL 226
Query 191 SRGNSRNSTPGSSRGNSPARMASGGGETALALLLLDRLNQLESK 234
+RG S N TP G +P +AS G + LLLDR Q+E+K
Sbjct 227 NRGASVNFTP--QNGITPLHIASRRGNVIMVRLLLDRGAQIETK 268
>7v0k_D H Ankyrin-1
Length=1881
Score = 36.2 bits (82), Expect = 0.94, Method: Composition-based stats.
Identities = 32/104 (31%), Positives = 44/104 (42%), Gaps = 6/104 (6%)
Query 135 ATEGALNTPKDHIGTRNPNNNAATVL--QLPQGTTLPKGFYAEGSRGGSQASSRSSSR-- 190
T+G + P HI RN + A VL P L K + + +
Sbjct 167 GTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQLLL 226
Query 191 SRGNSRNSTPGSSRGNSPARMASGGGETALALLLLDRLNQLESK 234
+RG S N TP G +P +AS G + LLLDR Q+E+K
Sbjct 227 NRGASVNFTP--QNGITPLHIASRRGNVIMVRLLLDRGAQIETK 268
>8csv_A A Ankyrin-1
Length=1881
Score = 36.2 bits (82), Expect = 0.94, Method: Composition-based stats.
Identities = 32/104 (31%), Positives = 44/104 (42%), Gaps = 6/104 (6%)
Query 135 ATEGALNTPKDHIGTRNPNNNAATVL--QLPQGTTLPKGFYAEGSRGGSQASSRSSSR-- 190
T+G + P HI RN + A VL P L K + + +
Sbjct 167 GTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQLLL 226
Query 191 SRGNSRNSTPGSSRGNSPARMASGGGETALALLLLDRLNQLESK 234
+RG S N TP G +P +AS G + LLLDR Q+E+K
Sbjct 227 NRGASVNFTP--QNGITPLHIASRRGNVIMVRLLLDRGAQIETK 268
>7uzu_A A Ankyrin-1
Length=1881
Score = 36.2 bits (82), Expect = 0.94, Method: Composition-based stats.
Identities = 32/104 (31%), Positives = 44/104 (42%), Gaps = 6/104 (6%)
Query 135 ATEGALNTPKDHIGTRNPNNNAATVL--QLPQGTTLPKGFYAEGSRGGSQASSRSSSR-- 190
T+G + P HI RN + A VL P L K + + +
Sbjct 167 GTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQLLL 226
Query 191 SRGNSRNSTPGSSRGNSPARMASGGGETALALLLLDRLNQLESK 234
+RG S N TP G +P +AS G + LLLDR Q+E+K
Sbjct 227 NRGASVNFTP--QNGITPLHIASRRGNVIMVRLLLDRGAQIETK 268
>8cte_A A Ankyrin-1
Length=1881
Score = 36.2 bits (82), Expect = 0.94, Method: Composition-based stats.
Identities = 32/104 (31%), Positives = 44/104 (42%), Gaps = 6/104 (6%)
Query 135 ATEGALNTPKDHIGTRNPNNNAATVL--QLPQGTTLPKGFYAEGSRGGSQASSRSSSR-- 190
T+G + P HI RN + A VL P L K + + +
Sbjct 167 GTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQLLL 226
Query 191 SRGNSRNSTPGSSRGNSPARMASGGGETALALLLLDRLNQLESK 234
+RG S N TP G +P +AS G + LLLDR Q+E+K
Sbjct 227 NRGASVNFTP--QNGITPLHIASRRGNVIMVRLLLDRGAQIETK 268
>8csl_A A Ankyrin-1
Length=1881
Score = 35.8 bits (81), Expect = 1.3, Method: Composition-based stats.
Identities = 32/104 (31%), Positives = 44/104 (42%), Gaps = 6/104 (6%)
Query 135 ATEGALNTPKDHIGTRNPNNNAATVL--QLPQGTTLPKGFYAEGSRGGSQASSRSSSR-- 190
T+G + P HI RN + A VL P L K + + +
Sbjct 167 GTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQLLL 226
Query 191 SRGNSRNSTPGSSRGNSPARMASGGGETALALLLLDRLNQLESK 234
+RG S N TP G +P +AS G + LLLDR Q+E+K
Sbjct 227 NRGASVNFTP--QNGITPLHIASRRGNVIMVRLLLDRGAQIETK 268
>8cs9_A A Ankyrin-1
Length=1881
Score = 35.8 bits (81), Expect = 1.3, Method: Composition-based stats.
Identities = 32/104 (31%), Positives = 44/104 (42%), Gaps = 6/104 (6%)
Query 135 ATEGALNTPKDHIGTRNPNNNAATVL--QLPQGTTLPKGFYAEGSRGGSQASSRSSSR-- 190
T+G + P HI RN + A VL P L K + + +
Sbjct 167 GTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQLLL 226
Query 191 SRGNSRNSTPGSSRGNSPARMASGGGETALALLLLDRLNQLESK 234
+RG S N TP G +P +AS G + LLLDR Q+E+K
Sbjct 227 NRGASVNFTP--QNGITPLHIASRRGNVIMVRLLLDRGAQIETK 268
>8th1_H H Nucleoprotein
Length=25
Score = 28.9 bits (63), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 12/13 (92%), Positives = 13/13 (100%), Gaps = 0/13 (0%)
Query 13 APRITFGGPTDST 25
APRITFGGP+DST
Sbjct 12 APRITFGGPSDST 24
Lambda K H a alpha
0.310 0.128 0.376 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 41424977811
Database: unitmol_20240403.fasta
Posted date: Apr 4, 2024 8:53 PM
Number of letters in database: 237,935,689
Number of sequences in database: 829,018
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40