[Multiple Alignment(many alignments)]
[Alignment Bar(many alignments)]
[show plain BLAST file]
BLASTP 2.11.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: unitmol_20240403.fasta
829,018 sequences; 237,935,689 total letters
Query= sp|P0DTC9|NCAP_SARS2 Nucleoprotein OS=Severe acute respiratory
syndrome coronavirus 2 OX=2697049 GN=N PE=1 SV=1
Length=419
Score E
Sequences producing significant alignments: (Bits) Value
8fg2_B B Nucleoprotein 854 0.0
8fg2_A A Nucleoprotein 854 0.0
8fd5_A A Nucleoprotein 854 0.0
7acs_A A Nucleoprotein 290 3e-97
6yi3_A A Nucleoprotein 290 3e-97
7act_A A Nucleoprotein 290 3e-97
7sd4_A A Nucleoprotein 287 3e-96
8x1h_B B Nucleoprotein 277 3e-92
1ssk_A A Nucleocapsid protein 275 3e-91
7vnu_A A Nucleoprotein 273 1e-90
7vnu_B B Nucleoprotein 273 1e-90
8x1h_A A Nucleoprotein 273 1e-90
7cdz_A A Nucleoprotein 273 1e-90
8iv3_B B Nucleoprotein 273 2e-90
8iqj_B B Nucleoprotein 273 2e-90
8j6x_B B Nucleoprotein 273 2e-90
8iv3_C C Nucleoprotein 272 4e-90
8iqj_C C Nucleoprotein 272 4e-90
7n3c_C C Nucleoprotein 271 6e-90
7vnu_C C Nucleoprotein 270 8e-90
8x1h_C C Nucleoprotein 270 9e-90
7uw3_A A Nucleoprotein 270 1e-89
7cdz_D D Nucleoprotein 270 1e-89
7cdz_B B Nucleoprotein 270 1e-89
8j6x_D D Nucleoprotein 270 2e-89
8iqj_D D Nucleoprotein 270 2e-89
8j6x_C C Nucleoprotein 270 3e-89
7str_C C Nucleoprotein 269 3e-89
7n0r_A A Nucleoprotein 268 4e-89
7n0r_B B Nucleoprotein 268 4e-89
7uw3_C C Nucleoprotein 268 7e-89
7cdz_C C Nucleoprotein 268 8e-89
6m3m_C C Nucleoprotein 268 8e-89
6m3m_B B Nucleoprotein 268 1e-88
6m3m_D D Nucleoprotein 268 1e-88
8j6x_A A Nucleoprotein 268 2e-88
8iv3_A A Nucleoprotein 268 2e-88
8iqj_A A Nucleoprotein 268 2e-88
8iv3_D D Nucleoprotein 268 2e-88
7xx1_B B Nucleoprotein 266 3e-88
7xx1_A A Nucleoprotein 266 3e-88
7xx1_C C Nucleoprotein 266 3e-88
7cr5_A A Nucleoprotein 266 3e-88
6vyo_D D Nucleoprotein 266 4e-88
6vyo_B B Nucleoprotein 266 4e-88
6vyo_C C Nucleoprotein 266 4e-88
7sts_D D Nucleoprotein 266 4e-88
7wzo_A A Nucleoprotein 266 4e-88
6vyo_A A Nucleoprotein 264 2e-87
7vnu_D D Nucleoprotein 263 6e-87
7vbd_A A Nucleoprotein 261 2e-86
7uw3_B B Nucleoprotein 261 5e-86
8x1h_D D Nucleoprotein 259 4e-85
7xwz_B B Nucleoprotein 256 3e-84
6m3m_A A Nucleoprotein 256 3e-84
6wkp_C C Nucleoprotein 254 2e-83
2ofz_A A Nucleocapsid protein 254 3e-83
6yun_B B Nucleoprotein 249 2e-81
7o35_B B Nucleoprotein 249 3e-81
6zco_A A Nucleoprotein 249 3e-81
6wkp_B B Nucleoprotein 246 3e-80
6yun_A A Nucleoprotein 245 8e-80
6wzq_C C Nucleoprotein 245 8e-80
7de1_B B Nucleoprotein 243 2e-79
6wzq_D D Nucleoprotein 243 4e-79
7ylb_B D Nucleoprotein 242 1e-78
7sue_L K Nucleoprotein 242 1e-78
7sue_F D Nucleoprotein 242 1e-78
7sue_E C Nucleoprotein 242 1e-78
6wkp_D D Nucleoprotein 241 2e-78
6wzq_A A Nucleoprotein 242 2e-78
6wzq_B B Nucleoprotein 242 2e-78
7c22_B B Nucleoprotein 240 6e-78
7ylb_H H Nucleoprotein 240 6e-78
7o36_C C Nucleoprotein 240 1e-77
7r98_C C Nucleoprotein 239 1e-77
7sue_K J Nucleoprotein 239 2e-77
7c22_C C Nucleoprotein 238 3e-77
7r98_A A Nucleoprotein 238 4e-77
7xx1_D D Nucleoprotein 238 4e-77
7o36_A A Nucleoprotein 238 4e-77
2jw8_B B Nucleocapsid protein 238 4e-77
2jw8_A A Nucleocapsid protein 238 4e-77
7vbd_C C Nucleoprotein 238 5e-77
6wzo_B B Nucleoprotein 236 2e-76
7ylb_E B Nucleoprotein 236 2e-76
7o05_D D Nucleoprotein 236 3e-76
7o05_C C Nucleoprotein 236 3e-76
7o35_C C Nucleoprotein 236 3e-76
7o35_A A Nucleoprotein 236 3e-76
7o36_D D Nucleoprotein 236 3e-76
7vbf_A A Nucleoprotein 235 4e-76
7xwz_A A Nucleoprotein 235 4e-76
7vbd_D D Nucleoprotein 235 6e-76
7uxx_F FFF Nucleoprotein 234 7e-76
7vbf_B B Nucleoprotein 234 8e-76
7ce0_A A Nucleoprotein 234 8e-76
7ce0_D D Nucleoprotein 234 8e-76
7ce0_B B Nucleoprotein 234 8e-76
7ce0_C C Nucleoprotein 234 8e-76
6wzo_D D Nucleoprotein 234 9e-76
7ylb_K K Nucleoprotein 234 9e-76
7ylb_D A Nucleoprotein 234 9e-76
7ylb_J J Nucleoprotein 234 2e-75
7uxx_A AAA Nucleoprotein 233 4e-75
7uxx_D DDD Nucleoprotein 233 4e-75
7uxz_D DDD Nucleoprotein 233 4e-75
7uxz_A AAA Nucleoprotein 233 4e-75
7uxx_E EEE Nucleoprotein 233 4e-75
7uxx_C CCC Nucleoprotein 233 4e-75
7uxx_B BBB Nucleoprotein 233 4e-75
7uxz_F FFF Nucleoprotein 233 4e-75
7uxz_E EEE Nucleoprotein 233 4e-75
7uxz_C CCC Nucleoprotein 233 4e-75
7uxz_B BBB Nucleoprotein 233 4e-75
7c22_A A Nucleoprotein 233 5e-75
7xxk_E E Nucleoprotein 233 5e-75
7xxk_D D Nucleoprotein 233 5e-75
7xxk_A A Nucleoprotein 233 5e-75
2cjr_D D NUCLEOCAPSID PROTEIN 233 5e-75
2cjr_A A NUCLEOCAPSID PROTEIN 233 5e-75
7sts_C C Nucleoprotein 233 5e-75
7ylb_G G Nucleoprotein 232 6e-75
7o05_A A Nucleoprotein 233 8e-75
7o36_B B Nucleoprotein 233 8e-75
7o35_D D Nucleoprotein 233 8e-75
7o05_B B Nucleoprotein 233 8e-75
7vbe_A A Nucleoprotein 231 2e-74
7de1_A A Nucleoprotein 231 2e-74
7c22_D D Nucleoprotein 231 2e-74
6wji_A A Nucleoprotein 231 3e-74
6wzo_C C Nucleoprotein 231 3e-74
6wzo_A A Nucleoprotein 231 3e-74
6wji_F F Nucleoprotein 231 3e-74
6wji_E E Nucleoprotein 231 3e-74
6wji_D D Nucleoprotein 231 3e-74
6wji_C C Nucleoprotein 231 3e-74
6wji_B B Nucleoprotein 231 3e-74
7r98_B B Nucleoprotein 231 3e-74
7ylb_A C Nucleoprotein 230 3e-74
7n3d_C C Nucleoprotein 230 7e-74
2cjr_C C NUCLEOCAPSID PROTEIN 229 1e-73
2cjr_B B NUCLEOCAPSID PROTEIN 229 1e-73
7vbd_B B Nucleoprotein 229 1e-73
7xxk_B B Nucleoprotein 229 1e-73
7vbe_B B Nucleoprotein 228 1e-73
7uw3_D D Nucleoprotein 229 1e-73
7xxk_C C Nucleoprotein 228 2e-73
7xxk_F F Nucleoprotein 228 2e-73
7f2e_G G Nucleoprotein 228 2e-73
7f2e_D D Nucleoprotein 228 2e-73
7f2e_C C Nucleoprotein 228 2e-73
7f2e_I I Nucleoprotein 228 2e-73
7f2b_B A Nucleoprotein 226 1e-72
7f2b_A B Nucleoprotein 226 1e-72
7f2e_A B Nucleoprotein 226 1e-72
7f2e_J J Nucleoprotein 226 1e-72
7f2e_H H Nucleoprotein 226 1e-72
7f2e_B A Nucleoprotein 226 1e-72
2cjr_F F NUCLEOCAPSID PROTEIN 226 1e-72
2cjr_H H NUCLEOCAPSID PROTEIN 224 2e-71
2cjr_E E NUCLEOCAPSID PROTEIN 224 2e-71
2og3_A A Nucleocapsid protein 221 1e-70
2cjr_G G NUCLEOCAPSID PROTEIN 221 2e-70
7xwx_A A Nucleoprotein 213 7e-68
6wkp_A A Nucleoprotein 214 1e-67
7xwx_B B Nucleoprotein 211 6e-67
7xwx_G G Nucleoprotein 211 6e-67
7xwx_C C Nucleoprotein 211 6e-67
7n0i_A A Nucleoprotein 207 2e-65
7n0i_B B Nucleoprotein 207 2e-65
7n0i_L G Nucleoprotein 207 2e-65
7n0i_G H Nucleoprotein 207 2e-65
7n0i_F F Nucleoprotein 207 2e-65
7n0i_E E Nucleoprotein 207 2e-65
7n0i_D D Nucleoprotein 207 2e-65
7n0i_C C Nucleoprotein 207 2e-65
7xwx_F F Nucleoprotein 207 2e-65
7xwx_D D Nucleoprotein 207 2e-65
7f2e_E E Nucleoprotein 207 3e-65
7f2e_K K Nucleoprotein 207 3e-65
7f2e_F F Nucleoprotein 203 6e-64
2gib_A A Nucleocapsid protein 201 6e-63
7xwx_E E Nucleoprotein 199 3e-62
2gib_B B Nucleocapsid protein 199 3e-62
7xwx_H H Nucleoprotein 194 2e-60
7f2e_L L Nucleoprotein 192 1e-59
4ud1_B B N PROTEIN 161 6e-47
4ud1_A A N PROTEIN 161 6e-47
4ud1_C C N PROTEIN 161 6e-47
6lnn_B B Nucleoprotein 157 1e-45
6lz8_C B Nucleoprotein 157 1e-45
6lz6_A A Nucleoprotein 157 1e-45
7dyd_B B Nucleoprotein 157 2e-45
6lz6_B B Nucleoprotein 157 2e-45
7dyd_A A Nucleoprotein 156 2e-45
6lz8_A A Nucleoprotein 155 4e-45
6lnn_A A Nucleoprotein 154 1e-44
6kl5_B B Nucleoprotein 150 1e-42
7pku_B B Nucleoprotein 142 9e-41
6kl6_B B Nucleoprotein 143 4e-40
6kl2_B B Nucleoprotein 142 1e-39
7dyd_C C Nucleoprotein 140 4e-39
6kl6_A A Nucleoprotein 140 5e-39
6kl2_A A Nucleoprotein 139 2e-38
6kl5_A A Nucleoprotein 138 3e-38
6lnn_C C Nucleoprotein 137 4e-38
6lz6_C C Nucleoprotein 137 4e-38
6lz8_D D Nucleoprotein 137 6e-38
6kl6_D D Nucleoprotein 137 9e-38
6lz8_B C Nucleoprotein 135 2e-37
7dyd_D D Nucleoprotein 135 3e-37
6lnn_D D Nucleoprotein 135 4e-37
4ud1_D D N PROTEIN 134 1e-36
6kl6_C C Nucleoprotein 134 2e-36
6lz6_D D Nucleoprotein 132 3e-36
4ud1_E E N PROTEIN 131 2e-35
6kl5_D D Nucleoprotein 129 6e-35
6kl2_D D Nucleoprotein 127 4e-34
6kl2_C C Nucleoprotein 127 4e-34
6kl5_C C Nucleoprotein 124 4e-33
7n45_A A Nucleoprotein 117 1e-30
6g13_C C Nucleoprotein 115 6e-30
6g13_B B Nucleoprotein 115 6e-30
6g13_D D Nucleoprotein 115 7e-30
6g13_A A Nucleoprotein 115 1e-29
3hd4_A A Nucleoprotein 115 1e-29
4kxj_A A Nucleoprotein 112 1e-28
4lmt_A A Nucleoprotein 111 3e-28
4lm7_A A Nucleoprotein 111 3e-28
4li4_A A Nucleoprotein 111 3e-28
4j3k_A A Nucleoprotein 111 3e-28
4lmc_A A Nucleoprotein 109 1e-27
4lm9_A A Nucleoprotein 109 1e-27
2gec_A A Nucleocapsid protein 77.4 9e-16
2gec_B B Nucleocapsid protein 77.4 9e-16
2c86_A A NUCLEOCAPSID PROTEIN 76.6 1e-15
2c86_B B NUCLEOCAPSID PROTEIN 76.6 1e-15
2bxx_B B NUCLEOCAPSID PROTEIN 76.6 1e-15
2bxx_A A NUCLEOCAPSID PROTEIN 76.6 1e-15
2btl_B B INFECTIOUS BRONCHITIS VIRUS NUCLEOCAPSID PROTEIN 75.1 5e-15
2btl_A A INFECTIOUS BRONCHITIS VIRUS NUCLEOCAPSID PROTEIN 75.1 5e-15
5epw_B B Nucleoprotein 61.6 2e-10
5epw_A A Nucleoprotein 61.2 3e-10
5n4k_B B Nucleoprotein 53.1 3e-07
5n4k_A A Nucleoprotein 53.1 4e-07
2ge7_A A Nucleocapsid protein 46.2 3e-05
2ge7_B B Nucleocapsid protein 46.2 3e-05
2ge8_A A Nucleocapsid protein 46.6 3e-05
2ge8_C F Nucleocapsid protein 46.6 3e-05
2ge8_D G Nucleocapsid protein 46.6 3e-05
2ge8_G I Nucleocapsid protein 46.2 4e-05
2ge8_H J Nucleocapsid protein 46.2 4e-05
2ge8_F D Nucleocapsid protein 46.2 4e-05
2ge8_B B Nucleocapsid protein 46.2 4e-05
2ge8_E C Nucleocapsid protein 46.2 4e-05
2ca1_A A NUCLEOCAPSID PROTEIN 40.8 0.003
2ca1_B B NUCLEOCAPSID PROTEIN 39.7 0.008
8th1_H H Nucleoprotein 32.0 0.59
7v0m_A A Ankyrin-1 35.0 2.1
7v0k_D H Ankyrin-1 35.0 2.1
8csv_A A Ankyrin-1 35.0 2.1
7uzu_A A Ankyrin-1 35.0 2.1
8cte_A A Ankyrin-1 35.0 2.1
8csl_A A Ankyrin-1 34.3 3.0
8cs9_A A Ankyrin-1 34.3 3.0
2v8j_A A PECTATE LYASE 32.7 9.4
>8fg2_B B Nucleoprotein
Length=419
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/419 (100%), Positives = 419/419 (100%), Gaps = 0/419 (0%)
Query 1 MSDNGPQNQRNAPRITFGGPSDSTGSNQNGERSGARSKQRRPQGLPNNTASWFTALTQHG 60
MSDNGPQNQRNAPRITFGGPSDSTGSNQNGERSGARSKQRRPQGLPNNTASWFTALTQHG
Sbjct 1 MSDNGPQNQRNAPRITFGGPSDSTGSNQNGERSGARSKQRRPQGLPNNTASWFTALTQHG 60
Query 61 KEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAG 120
KEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAG
Sbjct 61 KEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAG 120
Query 121 LPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPKGFYAEGSRGGS 180
LPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPKGFYAEGSRGGS
Sbjct 121 LPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPKGFYAEGSRGGS 180
Query 181 QASSRSSSRSRNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESKMSGKGQQ 240
QASSRSSSRSRNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESKMSGKGQQ
Sbjct 181 QASSRSSSRSRNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESKMSGKGQQ 240
Query 241 QQGQTVTKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKH 300
QQGQTVTKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKH
Sbjct 241 QQGQTVTKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKH 300
Query 301 WPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAY 360
WPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAY
Sbjct 301 WPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAY 360
Query 361 KTFPPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAADLDDFSKQLQQSMSSADSTQA 419
KTFPPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAADLDDFSKQLQQSMSSADSTQA
Sbjct 361 KTFPPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAADLDDFSKQLQQSMSSADSTQA 419
>8fg2_A A Nucleoprotein
Length=419
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/419 (100%), Positives = 419/419 (100%), Gaps = 0/419 (0%)
Query 1 MSDNGPQNQRNAPRITFGGPSDSTGSNQNGERSGARSKQRRPQGLPNNTASWFTALTQHG 60
MSDNGPQNQRNAPRITFGGPSDSTGSNQNGERSGARSKQRRPQGLPNNTASWFTALTQHG
Sbjct 1 MSDNGPQNQRNAPRITFGGPSDSTGSNQNGERSGARSKQRRPQGLPNNTASWFTALTQHG 60
Query 61 KEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAG 120
KEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAG
Sbjct 61 KEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAG 120
Query 121 LPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPKGFYAEGSRGGS 180
LPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPKGFYAEGSRGGS
Sbjct 121 LPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPKGFYAEGSRGGS 180
Query 181 QASSRSSSRSRNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESKMSGKGQQ 240
QASSRSSSRSRNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESKMSGKGQQ
Sbjct 181 QASSRSSSRSRNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESKMSGKGQQ 240
Query 241 QQGQTVTKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKH 300
QQGQTVTKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKH
Sbjct 241 QQGQTVTKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKH 300
Query 301 WPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAY 360
WPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAY
Sbjct 301 WPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAY 360
Query 361 KTFPPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAADLDDFSKQLQQSMSSADSTQA 419
KTFPPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAADLDDFSKQLQQSMSSADSTQA
Sbjct 361 KTFPPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAADLDDFSKQLQQSMSSADSTQA 419
>8fd5_A A Nucleoprotein
Length=419
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/419 (100%), Positives = 419/419 (100%), Gaps = 0/419 (0%)
Query 1 MSDNGPQNQRNAPRITFGGPSDSTGSNQNGERSGARSKQRRPQGLPNNTASWFTALTQHG 60
MSDNGPQNQRNAPRITFGGPSDSTGSNQNGERSGARSKQRRPQGLPNNTASWFTALTQHG
Sbjct 1 MSDNGPQNQRNAPRITFGGPSDSTGSNQNGERSGARSKQRRPQGLPNNTASWFTALTQHG 60
Query 61 KEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAG 120
KEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAG
Sbjct 61 KEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAG 120
Query 121 LPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPKGFYAEGSRGGS 180
LPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPKGFYAEGSRGGS
Sbjct 121 LPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPKGFYAEGSRGGS 180
Query 181 QASSRSSSRSRNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESKMSGKGQQ 240
QASSRSSSRSRNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESKMSGKGQQ
Sbjct 181 QASSRSSSRSRNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESKMSGKGQQ 240
Query 241 QQGQTVTKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKH 300
QQGQTVTKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKH
Sbjct 241 QQGQTVTKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKH 300
Query 301 WPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAY 360
WPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAY
Sbjct 301 WPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAY 360
Query 361 KTFPPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAADLDDFSKQLQQSMSSADSTQA 419
KTFPPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAADLDDFSKQLQQSMSSADSTQA
Sbjct 361 KTFPPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAADLDDFSKQLQQSMSSADSTQA 419
>7acs_A A Nucleoprotein
Length=140
Score = 290 bits (742), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 137/138 (99%), Positives = 137/138 (99%), Gaps = 0/138 (0%)
Query 43 QGLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMK 102
GLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMK
Sbjct 3 MGLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMK 62
Query 103 DLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLP 162
DLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLP
Sbjct 63 DLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLP 122
Query 163 QGTTLPKGFYAEGSRGGS 180
QGTTLPKGFYAEGSRGGS
Sbjct 123 QGTTLPKGFYAEGSRGGS 140
>6yi3_A A Nucleoprotein
Length=140
Score = 290 bits (742), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 137/138 (99%), Positives = 137/138 (99%), Gaps = 0/138 (0%)
Query 43 QGLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMK 102
GLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMK
Sbjct 3 MGLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMK 62
Query 103 DLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLP 162
DLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLP
Sbjct 63 DLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLP 122
Query 163 QGTTLPKGFYAEGSRGGS 180
QGTTLPKGFYAEGSRGGS
Sbjct 123 QGTTLPKGFYAEGSRGGS 140
>7act_A A Nucleoprotein
Length=140
Score = 290 bits (741), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 137/137 (100%), Positives = 137/137 (100%), Gaps = 0/137 (0%)
Query 44 GLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKD 103
GLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKD
Sbjct 4 GLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKD 63
Query 104 LSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQ 163
LSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQ
Sbjct 64 LSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQ 123
Query 164 GTTLPKGFYAEGSRGGS 180
GTTLPKGFYAEGSRGGS
Sbjct 124 GTTLPKGFYAEGSRGGS 140
>7sd4_A A Nucleoprotein
Length=136
Score = 287 bits (734), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 135/135 (100%), Positives = 135/135 (100%), Gaps = 0/135 (0%)
Query 40 RRPQGLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDG 99
RRPQGLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDG
Sbjct 2 RRPQGLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDG 61
Query 100 KMKDLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVL 159
KMKDLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVL
Sbjct 62 KMKDLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVL 121
Query 160 QLPQGTTLPKGFYAE 174
QLPQGTTLPKGFYAE
Sbjct 122 QLPQGTTLPKGFYAE 136
>8x1h_B B Nucleoprotein
Length=134
Score = 277 bits (708), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 130/130 (100%), Positives = 130/130 (100%), Gaps = 0/130 (0%)
Query 46 PNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLS 105
PNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLS
Sbjct 5 PNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLS 64
Query 106 PRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGT 165
PRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGT
Sbjct 65 PRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGT 124
Query 166 TLPKGFYAEG 175
TLPKGFYAEG
Sbjct 125 TLPKGFYAEG 134
>1ssk_A A Nucleocapsid protein
Length=158
Score = 275 bits (704), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 127/138 (92%), Positives = 133/138 (96%), Gaps = 0/138 (0%)
Query 43 QGLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMK 102
GLPNNTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK
Sbjct 21 MGLPNNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMK 80
Query 103 DLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLP 162
+LSPRWYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLP
Sbjct 81 ELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLP 140
Query 163 QGTTLPKGFYAEGSRGGS 180
QGTTLPKGFYAEGSRGGS
Sbjct 141 QGTTLPKGFYAEGSRGGS 158
>7vnu_A A Nucleoprotein
Length=131
Score = 273 bits (697), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%)
Query 47 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 106
NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP
Sbjct 4 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 63
Query 107 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 166
RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT
Sbjct 64 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 123
Query 167 LPKGFYAE 174
LPKGFYAE
Sbjct 124 LPKGFYAE 131
>7vnu_B B Nucleoprotein
Length=131
Score = 273 bits (697), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%)
Query 47 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 106
NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP
Sbjct 4 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 63
Query 107 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 166
RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT
Sbjct 64 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 123
Query 167 LPKGFYAE 174
LPKGFYAE
Sbjct 124 LPKGFYAE 131
>8x1h_A A Nucleoprotein
Length=134
Score = 273 bits (697), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%)
Query 47 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 106
NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP
Sbjct 6 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 65
Query 107 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 166
RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT
Sbjct 66 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 125
Query 167 LPKGFYAE 174
LPKGFYAE
Sbjct 126 LPKGFYAE 133
>7cdz_A A Nucleoprotein
Length=137
Score = 273 bits (697), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%)
Query 47 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 106
NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP
Sbjct 10 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 69
Query 107 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 166
RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT
Sbjct 70 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 129
Query 167 LPKGFYAE 174
LPKGFYAE
Sbjct 130 LPKGFYAE 137
>8iv3_B B Nucleoprotein
Length=155
Score = 273 bits (697), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%)
Query 47 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 106
NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP
Sbjct 28 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 87
Query 107 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 166
RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT
Sbjct 88 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 147
Query 167 LPKGFYAE 174
LPKGFYAE
Sbjct 148 LPKGFYAE 155
>8iqj_B B Nucleoprotein
Length=155
Score = 273 bits (697), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%)
Query 47 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 106
NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP
Sbjct 28 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 87
Query 107 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 166
RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT
Sbjct 88 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 147
Query 167 LPKGFYAE 174
LPKGFYAE
Sbjct 148 LPKGFYAE 155
>8j6x_B B Nucleoprotein
Length=155
Score = 273 bits (697), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%)
Query 47 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 106
NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP
Sbjct 28 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 87
Query 107 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 166
RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT
Sbjct 88 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 147
Query 167 LPKGFYAE 174
LPKGFYAE
Sbjct 148 LPKGFYAE 155
>8iv3_C C Nucleoprotein
Length=155
Score = 272 bits (696), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 128/129 (99%), Positives = 128/129 (99%), Gaps = 0/129 (0%)
Query 46 PNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLS 105
PNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIR GDGKMKDLS
Sbjct 27 PNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRXGDGKMKDLS 86
Query 106 PRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGT 165
PRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGT
Sbjct 87 PRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGT 146
Query 166 TLPKGFYAE 174
TLPKGFYAE
Sbjct 147 TLPKGFYAE 155
>8iqj_C C Nucleoprotein
Length=155
Score = 272 bits (696), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 128/129 (99%), Positives = 128/129 (99%), Gaps = 0/129 (0%)
Query 46 PNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLS 105
PNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIR GDGKMKDLS
Sbjct 27 PNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRXGDGKMKDLS 86
Query 106 PRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGT 165
PRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGT
Sbjct 87 PRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGT 146
Query 166 TLPKGFYAE 174
TLPKGFYAE
Sbjct 147 TLPKGFYAE 155
>7n3c_C C Nucleoprotein
Length=130
Score = 271 bits (692), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%)
Query 47 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 106
NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP
Sbjct 4 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 63
Query 107 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 166
RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT
Sbjct 64 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 123
Query 167 LPKGFYA 173
LPKGFYA
Sbjct 124 LPKGFYA 130
>7vnu_C C Nucleoprotein
Length=131
Score = 270 bits (691), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR
Sbjct 5 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 64
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL
Sbjct 65 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 124
Query 168 PKGFYAE 174
PKGFYAE
Sbjct 125 PKGFYAE 131
>8x1h_C C Nucleoprotein
Length=134
Score = 270 bits (691), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR
Sbjct 7 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 66
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL
Sbjct 67 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 126
Query 168 PKGFYAE 174
PKGFYAE
Sbjct 127 PKGFYAE 133
>7uw3_A A Nucleoprotein
Length=136
Score = 270 bits (691), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR
Sbjct 10 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 69
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL
Sbjct 70 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 129
Query 168 PKGFYAE 174
PKGFYAE
Sbjct 130 PKGFYAE 136
>7cdz_D D Nucleoprotein
Length=137
Score = 270 bits (691), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR
Sbjct 11 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 70
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL
Sbjct 71 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 130
Query 168 PKGFYAE 174
PKGFYAE
Sbjct 131 PKGFYAE 137
>7cdz_B B Nucleoprotein
Length=137
Score = 270 bits (691), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 127/127 (100%), Positives = 127/127 (100%), Gaps = 0/127 (0%)
Query 47 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 106
NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP
Sbjct 10 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 69
Query 107 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 166
RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT
Sbjct 70 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 129
Query 167 LPKGFYA 173
LPKGFYA
Sbjct 130 LPKGFYA 136
>8j6x_D D Nucleoprotein
Length=155
Score = 270 bits (691), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 127/128 (99%), Positives = 127/128 (99%), Gaps = 0/128 (0%)
Query 47 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 106
NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGD KMKDLSP
Sbjct 28 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDXKMKDLSP 87
Query 107 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 166
RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT
Sbjct 88 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 147
Query 167 LPKGFYAE 174
LPKGFYAE
Sbjct 148 LPKGFYAE 155
>8iqj_D D Nucleoprotein
Length=155
Score = 270 bits (691), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 127/128 (99%), Positives = 127/128 (99%), Gaps = 0/128 (0%)
Query 47 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 106
NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGD KMKDLSP
Sbjct 28 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDXKMKDLSP 87
Query 107 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 166
RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT
Sbjct 88 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 147
Query 167 LPKGFYAE 174
LPKGFYAE
Sbjct 148 LPKGFYAE 155
>8j6x_C C Nucleoprotein
Length=155
Score = 270 bits (690), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 127/129 (98%), Positives = 127/129 (98%), Gaps = 0/129 (0%)
Query 46 PNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLS 105
PNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRI GDGKMKDLS
Sbjct 27 PNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIXXGDGKMKDLS 86
Query 106 PRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGT 165
PRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGT
Sbjct 87 PRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGT 146
Query 166 TLPKGFYAE 174
TLPKGFYAE
Sbjct 147 TLPKGFYAE 155
>7str_C C Nucleoprotein
Length=130
Score = 269 bits (688), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 126/126 (100%), Positives = 126/126 (100%), Gaps = 0/126 (0%)
Query 47 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 106
NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP
Sbjct 4 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 63
Query 107 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 166
RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT
Sbjct 64 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 123
Query 167 LPKGFY 172
LPKGFY
Sbjct 124 LPKGFY 129
>7n0r_A A Nucleoprotein
Length=129
Score = 268 bits (686), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 126/126 (100%), Positives = 126/126 (100%), Gaps = 0/126 (0%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW
Sbjct 4 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 63
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP
Sbjct 64 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 123
Query 169 KGFYAE 174
KGFYAE
Sbjct 124 KGFYAE 129
>7n0r_B B Nucleoprotein
Length=129
Score = 268 bits (686), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 126/126 (100%), Positives = 126/126 (100%), Gaps = 0/126 (0%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW
Sbjct 4 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 63
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP
Sbjct 64 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 123
Query 169 KGFYAE 174
KGFYAE
Sbjct 124 KGFYAE 129
>7uw3_C C Nucleoprotein
Length=136
Score = 268 bits (686), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 126/126 (100%), Positives = 126/126 (100%), Gaps = 0/126 (0%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR
Sbjct 10 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 69
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL
Sbjct 70 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 129
Query 168 PKGFYA 173
PKGFYA
Sbjct 130 PKGFYA 135
>7cdz_C C Nucleoprotein
Length=137
Score = 268 bits (686), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 126/126 (100%), Positives = 126/126 (100%), Gaps = 0/126 (0%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR
Sbjct 11 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 70
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL
Sbjct 71 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 130
Query 168 PKGFYA 173
PKGFYA
Sbjct 131 PKGFYA 136
>6m3m_C C Nucleoprotein
Length=136
Score = 268 bits (685), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 126/127 (99%), Positives = 126/127 (99%), Gaps = 0/127 (0%)
Query 46 PNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLS 105
PNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIR GDGKMKDLS
Sbjct 8 PNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRXGDGKMKDLS 67
Query 106 PRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGT 165
PRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGT
Sbjct 68 PRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGT 127
Query 166 TLPKGFY 172
TLPKGFY
Sbjct 128 TLPKGFY 134
>6m3m_B B Nucleoprotein
Length=136
Score = 268 bits (685), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 126/127 (99%), Positives = 126/127 (99%), Gaps = 0/127 (0%)
Query 47 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 106
NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRG DGKMKDLSP
Sbjct 9 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGXDGKMKDLSP 68
Query 107 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 166
RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT
Sbjct 69 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 128
Query 167 LPKGFYA 173
LPKGFYA
Sbjct 129 LPKGFYA 135
>6m3m_D D Nucleoprotein
Length=136
Score = 268 bits (685), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 126/127 (99%), Positives = 126/127 (99%), Gaps = 0/127 (0%)
Query 47 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 106
NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGD KMKDLSP
Sbjct 9 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDXKMKDLSP 68
Query 107 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 166
RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT
Sbjct 69 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 128
Query 167 LPKGFYA 173
LPKGFYA
Sbjct 129 LPKGFYA 135
>8j6x_A A Nucleoprotein
Length=155
Score = 268 bits (685), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 126/127 (99%), Positives = 126/127 (99%), Gaps = 0/127 (0%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIR GDGKMKDLSPR
Sbjct 29 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRXGDGKMKDLSPR 88
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL
Sbjct 89 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 148
Query 168 PKGFYAE 174
PKGFYAE
Sbjct 149 PKGFYAE 155
>8iv3_A A Nucleoprotein
Length=155
Score = 268 bits (685), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 126/127 (99%), Positives = 126/127 (99%), Gaps = 0/127 (0%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIR GDGKMKDLSPR
Sbjct 29 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRXGDGKMKDLSPR 88
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL
Sbjct 89 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 148
Query 168 PKGFYAE 174
PKGFYAE
Sbjct 149 PKGFYAE 155
>8iqj_A A Nucleoprotein
Length=155
Score = 268 bits (685), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 126/127 (99%), Positives = 126/127 (99%), Gaps = 0/127 (0%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIR GDGKMKDLSPR
Sbjct 29 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRXGDGKMKDLSPR 88
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL
Sbjct 89 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 148
Query 168 PKGFYAE 174
PKGFYAE
Sbjct 149 PKGFYAE 155
>8iv3_D D Nucleoprotein
Length=155
Score = 268 bits (684), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 126/128 (98%), Positives = 126/128 (98%), Gaps = 0/128 (0%)
Query 47 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 106
NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIR DGKMKDLSP
Sbjct 28 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRXXDGKMKDLSP 87
Query 107 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 166
RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT
Sbjct 88 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 147
Query 167 LPKGFYAE 174
LPKGFYAE
Sbjct 148 LPKGFYAE 155
>7xx1_B B Nucleoprotein
Length=125
Score = 266 bits (680), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW
Sbjct 1 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 60
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP
Sbjct 61 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 120
Query 169 KGFYA 173
KGFYA
Sbjct 121 KGFYA 125
>7xx1_A A Nucleoprotein
Length=125
Score = 266 bits (680), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW
Sbjct 1 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 60
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP
Sbjct 61 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 120
Query 169 KGFYA 173
KGFYA
Sbjct 121 KGFYA 125
>7xx1_C C Nucleoprotein
Length=125
Score = 266 bits (680), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW
Sbjct 1 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 60
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP
Sbjct 61 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 120
Query 169 KGFYA 173
KGFYA
Sbjct 121 KGFYA 125
>7cr5_A A Nucleoprotein
Length=134
Score = 266 bits (681), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR
Sbjct 8 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 67
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL
Sbjct 68 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 127
Query 168 PKGFY 172
PKGFY
Sbjct 128 PKGFY 132
>6vyo_D D Nucleoprotein
Length=128
Score = 266 bits (680), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW
Sbjct 4 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 63
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP
Sbjct 64 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 123
Query 169 KGFYA 173
KGFYA
Sbjct 124 KGFYA 128
>6vyo_B B Nucleoprotein
Length=128
Score = 266 bits (680), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW
Sbjct 4 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 63
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP
Sbjct 64 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 123
Query 169 KGFYA 173
KGFYA
Sbjct 124 KGFYA 128
>6vyo_C C Nucleoprotein
Length=128
Score = 266 bits (680), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW
Sbjct 4 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 63
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP
Sbjct 64 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 123
Query 169 KGFYA 173
KGFYA
Sbjct 124 KGFYA 128
>7sts_D D Nucleoprotein
Length=130
Score = 266 bits (680), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW
Sbjct 6 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 65
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP
Sbjct 66 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 125
Query 169 KGFYA 173
KGFYA
Sbjct 126 KGFYA 130
>7wzo_A A Nucleoprotein
Length=131
Score = 266 bits (680), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW
Sbjct 6 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 65
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP
Sbjct 66 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 125
Query 169 KGFYA 173
KGFYA
Sbjct 126 KGFYA 130
>6vyo_A A Nucleoprotein
Length=128
Score = 264 bits (675), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 124/124 (100%), Positives = 124/124 (100%), Gaps = 0/124 (0%)
Query 50 ASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWY 109
ASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWY
Sbjct 5 ASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWY 64
Query 110 FYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPK 169
FYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPK
Sbjct 65 FYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPK 124
Query 170 GFYA 173
GFYA
Sbjct 125 GFYA 128
>7vnu_D D Nucleoprotein
Length=131
Score = 263 bits (672), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 124/127 (98%), Positives = 124/127 (98%), Gaps = 0/127 (0%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIR GKMKDLSPR
Sbjct 5 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRXXXGKMKDLSPR 64
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL
Sbjct 65 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 124
Query 168 PKGFYAE 174
PKGFYAE
Sbjct 125 PKGFYAE 131
>7vbd_A A Nucleoprotein
Length=127
Score = 261 bits (668), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 123/123 (100%), Positives = 123/123 (100%), Gaps = 0/123 (0%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW
Sbjct 2 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 61
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP
Sbjct 62 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 121
Query 169 KGF 171
KGF
Sbjct 122 KGF 124
>7uw3_B B Nucleoprotein
Length=136
Score = 261 bits (667), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 123/127 (97%), Positives = 123/127 (97%), Gaps = 0/127 (0%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRG MKDLSPR
Sbjct 10 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGXXXXMKDLSPR 69
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL
Sbjct 70 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 129
Query 168 PKGFYAE 174
PKGFYAE
Sbjct 130 PKGFYAE 136
>8x1h_D D Nucleoprotein
Length=134
Score = 259 bits (661), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 122/127 (96%), Positives = 122/127 (96%), Gaps = 0/127 (0%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIR MKDLSPR
Sbjct 7 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRXXXXXMKDLSPR 66
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL
Sbjct 67 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 126
Query 168 PKGFYAE 174
PKGFYAE
Sbjct 127 PKGFYAE 133
>7xwz_B B Nucleoprotein
Length=125
Score = 256 bits (654), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 121/125 (97%), Positives = 121/125 (97%), Gaps = 0/125 (0%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGG KDLSPR
Sbjct 1 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGXXXXKDLSPR 60
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL
Sbjct 61 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 120
Query 168 PKGFY 172
PKGFY
Sbjct 121 PKGFY 125
>6m3m_A A Nucleoprotein
Length=136
Score = 256 bits (655), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 121/126 (96%), Positives = 121/126 (96%), Gaps = 0/126 (0%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIR MKDLSPR
Sbjct 10 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRXXXXXMKDLSPR 69
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL
Sbjct 70 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 129
Query 168 PKGFYA 173
PKGFYA
Sbjct 130 PKGFYA 135
>6wkp_C C Nucleoprotein
Length=128
Score = 254 bits (648), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 120/124 (97%), Positives = 120/124 (97%), Gaps = 0/124 (0%)
Query 50 ASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWY 109
ASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGG KDLSPRWY
Sbjct 5 ASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGXXXXKDLSPRWY 64
Query 110 FYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPK 169
FYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPK
Sbjct 65 FYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPK 124
Query 170 GFYA 173
GFYA
Sbjct 125 GFYA 128
>2ofz_A A Nucleocapsid protein
Length=138
Score = 254 bits (648), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 116/126 (92%), Positives = 122/126 (97%), Gaps = 0/126 (0%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NTASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRATRR+RGGDGKMK+LSPR
Sbjct 13 NTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPR 72
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTL
Sbjct 73 WYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTL 132
Query 168 PKGFYA 173
PKGFYA
Sbjct 133 PKGFYA 138
>6yun_B B Nucleoprotein
Length=135
Score = 249 bits (636), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 118/118 (100%), Positives = 118/118 (100%), Gaps = 0/118 (0%)
Query 247 TKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQ 306
TKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQ
Sbjct 18 TKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQ 77
Query 307 FAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 78 FAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 135
>7o35_B B Nucleoprotein
Length=136
Score = 249 bits (635), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 118/118 (100%), Positives = 118/118 (100%), Gaps = 0/118 (0%)
Query 247 TKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQ 306
TKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQ
Sbjct 19 TKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQ 78
Query 307 FAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 79 FAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>6zco_A A Nucleoprotein
Length=135
Score = 249 bits (635), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 118/118 (100%), Positives = 118/118 (100%), Gaps = 0/118 (0%)
Query 247 TKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQ 306
TKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQ
Sbjct 18 TKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQ 77
Query 307 FAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 78 FAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 135
>6wkp_B B Nucleoprotein
Length=128
Score = 246 bits (628), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 117/126 (93%), Positives = 117/126 (93%), Gaps = 0/126 (0%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATR KDLSPR
Sbjct 3 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRXXXXXXXXXKDLSPR 62
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL
Sbjct 63 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 122
Query 168 PKGFYA 173
PKGFYA
Sbjct 123 PKGFYA 128
>6yun_A A Nucleoprotein
Length=135
Score = 245 bits (626), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 116/116 (100%), Positives = 116/116 (100%), Gaps = 0/116 (0%)
Query 249 KSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFA 308
KSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFA
Sbjct 20 KSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFA 79
Query 309 PSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
PSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 80 PSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 135
>6wzq_C C Nucleoprotein
Length=137
Score = 245 bits (626), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 116/116 (100%), Positives = 116/116 (100%), Gaps = 0/116 (0%)
Query 249 KSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFA 308
KSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFA
Sbjct 22 KSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFA 81
Query 309 PSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
PSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 82 PSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 137
>7de1_B B Nucleoprotein
Length=115
Score = 243 bits (621), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 115/115 (100%), Positives = 115/115 (100%), Gaps = 0/115 (0%)
Query 250 SAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAP 309
SAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAP
Sbjct 1 SAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAP 60
Query 310 SASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
SASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 61 SASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 115
>6wzq_D D Nucleoprotein
Length=137
Score = 243 bits (621), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 115/115 (100%), Positives = 115/115 (100%), Gaps = 0/115 (0%)
Query 250 SAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAP 309
SAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAP
Sbjct 23 SAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAP 82
Query 310 SASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
SASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 83 SASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 137
>7ylb_B D Nucleoprotein
Length=122
Score = 242 bits (617), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 114/114 (100%), Positives = 114/114 (100%), Gaps = 0/114 (0%)
Query 251 AAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPS 310
AAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPS
Sbjct 9 AAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPS 68
Query 311 ASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
ASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 69 ASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 122
>7sue_L K Nucleoprotein
Length=130
Score = 242 bits (617), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 115/126 (91%), Positives = 115/126 (91%), Gaps = 0/126 (0%)
Query 47 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 106
NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRAT DLSP
Sbjct 4 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATXXXXXXXXXXXDLSP 63
Query 107 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 166
RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT
Sbjct 64 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 123
Query 167 LPKGFY 172
LPKGFY
Sbjct 124 LPKGFY 129
>7sue_F D Nucleoprotein
Length=130
Score = 242 bits (617), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 115/126 (91%), Positives = 115/126 (91%), Gaps = 0/126 (0%)
Query 47 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 106
NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRAT DLSP
Sbjct 4 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATXXXXXXXXXXXDLSP 63
Query 107 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 166
RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT
Sbjct 64 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 123
Query 167 LPKGFY 172
LPKGFY
Sbjct 124 LPKGFY 129
>7sue_E C Nucleoprotein
Length=130
Score = 242 bits (617), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 115/126 (91%), Positives = 115/126 (91%), Gaps = 0/126 (0%)
Query 47 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 106
NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRAT DLSP
Sbjct 4 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATXXXXXXXXXXXDLSP 63
Query 107 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 166
RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT
Sbjct 64 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 123
Query 167 LPKGFY 172
LPKGFY
Sbjct 124 LPKGFY 129
>6wkp_D D Nucleoprotein
Length=128
Score = 241 bits (616), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 115/125 (92%), Positives = 115/125 (92%), Gaps = 0/125 (0%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATR DLSPRW
Sbjct 4 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRXXXXXXXXXXDLSPRW 63
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP
Sbjct 64 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 123
Query 169 KGFYA 173
KGFYA
Sbjct 124 KGFYA 128
>6wzq_A A Nucleoprotein
Length=137
Score = 242 bits (617), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 114/114 (100%), Positives = 114/114 (100%), Gaps = 0/114 (0%)
Query 251 AAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPS 310
AAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPS
Sbjct 24 AAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPS 83
Query 311 ASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
ASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 84 ASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 137
>6wzq_B B Nucleoprotein
Length=137
Score = 242 bits (617), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 114/114 (100%), Positives = 114/114 (100%), Gaps = 0/114 (0%)
Query 251 AAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPS 310
AAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPS
Sbjct 24 AAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPS 83
Query 311 ASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
ASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 84 ASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 137
>7c22_B B Nucleoprotein
Length=120
Score = 240 bits (612), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 113/113 (100%), Positives = 113/113 (100%), Gaps = 0/113 (0%)
Query 252 AEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSA 311
AEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSA
Sbjct 8 AEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSA 67
Query 312 SAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
SAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 68 SAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 120
>7ylb_H H Nucleoprotein
Length=122
Score = 240 bits (612), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 113/113 (100%), Positives = 113/113 (100%), Gaps = 0/113 (0%)
Query 252 AEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSA 311
AEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSA
Sbjct 10 AEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSA 69
Query 312 SAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
SAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 70 SAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 122
>7o36_C C Nucleoprotein
Length=136
Score = 240 bits (612), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 113/113 (100%), Positives = 113/113 (100%), Gaps = 0/113 (0%)
Query 252 AEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSA 311
AEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSA
Sbjct 24 AEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSA 83
Query 312 SAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
SAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 84 SAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>7r98_C C Nucleoprotein
Length=127
Score = 239 bits (610), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 114/126 (90%), Positives = 114/126 (90%), Gaps = 0/126 (0%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATR SPRW
Sbjct 2 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRXXXXXXXXXXXXSPRW 61
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP
Sbjct 62 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 121
Query 169 KGFYAE 174
KGFYAE
Sbjct 122 KGFYAE 127
>7sue_K J Nucleoprotein
Length=130
Score = 239 bits (610), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 114/126 (90%), Positives = 114/126 (90%), Gaps = 0/126 (0%)
Query 47 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSP 106
NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATR SP
Sbjct 4 NNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRXXXXXXXXXXXXSP 63
Query 107 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 166
RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT
Sbjct 64 RWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTT 123
Query 167 LPKGFY 172
LPKGFY
Sbjct 124 LPKGFY 129
>7c22_C C Nucleoprotein
Length=120
Score = 238 bits (608), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 112/112 (100%), Positives = 112/112 (100%), Gaps = 0/112 (0%)
Query 253 EASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSAS 312
EASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSAS
Sbjct 9 EASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSAS 68
Query 313 AFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
AFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 69 AFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 120
>7r98_A A Nucleoprotein
Length=127
Score = 238 bits (607), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 119/126 (94%), Positives = 119/126 (94%), Gaps = 0/126 (0%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRR MKDLSPRW
Sbjct 2 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRXXXXXXXMKDLSPRW 61
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP
Sbjct 62 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 121
Query 169 KGFYAE 174
KGFYAE
Sbjct 122 KGFYAE 127
>7xx1_D D Nucleoprotein
Length=125
Score = 238 bits (607), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 119/125 (95%), Positives = 119/125 (95%), Gaps = 0/125 (0%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRR KMKDLSPRW
Sbjct 1 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRXXXXXXKMKDLSPRW 60
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP
Sbjct 61 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 120
Query 169 KGFYA 173
KGFYA
Sbjct 121 KGFYA 125
>7o36_A A Nucleoprotein
Length=136
Score = 238 bits (608), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 112/112 (100%), Positives = 112/112 (100%), Gaps = 0/112 (0%)
Query 253 EASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSAS 312
EASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSAS
Sbjct 25 EASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSAS 84
Query 313 AFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
AFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 85 AFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>2jw8_B B Nucleocapsid protein
Length=128
Score = 238 bits (607), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 113/118 (96%), Positives = 114/118 (97%), Gaps = 0/118 (0%)
Query 247 TKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQ 306
TKKSAAEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQ
Sbjct 11 TKKSAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQ 70
Query 307 FAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FAPSASAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 71 FAPSASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 128
>2jw8_A A Nucleocapsid protein
Length=128
Score = 238 bits (607), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 113/118 (96%), Positives = 114/118 (97%), Gaps = 0/118 (0%)
Query 247 TKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQ 306
TKKSAAEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQ
Sbjct 11 TKKSAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQ 70
Query 307 FAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FAPSASAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 71 FAPSASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 128
>7vbd_C C Nucleoprotein
Length=127
Score = 238 bits (606), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 113/122 (93%), Positives = 113/122 (93%), Gaps = 0/122 (0%)
Query 50 ASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWY 109
ASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATR KDLSPRWY
Sbjct 3 ASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRXXXXXXXXXKDLSPRWY 62
Query 110 FYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPK 169
FYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPK
Sbjct 63 FYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPK 122
Query 170 GF 171
GF
Sbjct 123 GF 124
>6wzo_B B Nucleoprotein
Length=121
Score = 236 bits (602), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 111/111 (100%), Positives = 111/111 (100%), Gaps = 0/111 (0%)
Query 254 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 313
ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA
Sbjct 11 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 70
Query 314 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 71 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 121
>7ylb_E B Nucleoprotein
Length=122
Score = 236 bits (602), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 111/111 (100%), Positives = 111/111 (100%), Gaps = 0/111 (0%)
Query 254 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 313
ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA
Sbjct 12 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 71
Query 314 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 72 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 122
>7o05_D D Nucleoprotein
Length=136
Score = 236 bits (602), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 111/111 (100%), Positives = 111/111 (100%), Gaps = 0/111 (0%)
Query 254 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 313
ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA
Sbjct 26 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 85
Query 314 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 86 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>7o05_C C Nucleoprotein
Length=136
Score = 236 bits (602), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 111/111 (100%), Positives = 111/111 (100%), Gaps = 0/111 (0%)
Query 254 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 313
ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA
Sbjct 26 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 85
Query 314 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 86 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>7o35_C C Nucleoprotein
Length=136
Score = 236 bits (602), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 111/111 (100%), Positives = 111/111 (100%), Gaps = 0/111 (0%)
Query 254 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 313
ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA
Sbjct 26 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 85
Query 314 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 86 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>7o35_A A Nucleoprotein
Length=136
Score = 236 bits (602), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 111/111 (100%), Positives = 111/111 (100%), Gaps = 0/111 (0%)
Query 254 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 313
ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA
Sbjct 26 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 85
Query 314 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 86 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>7o36_D D Nucleoprotein
Length=136
Score = 236 bits (602), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 111/111 (100%), Positives = 111/111 (100%), Gaps = 0/111 (0%)
Query 254 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 313
ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA
Sbjct 26 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 85
Query 314 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 86 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>7vbf_A A Nucleoprotein
Length=116
Score = 235 bits (599), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)
Query 255 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 314
SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF
Sbjct 7 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 66
Query 315 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 67 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 116
>7xwz_A A Nucleoprotein
Length=125
Score = 235 bits (600), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 112/124 (90%), Positives = 112/124 (90%), Gaps = 0/124 (0%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRA DLSPR
Sbjct 1 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRAXXXXXXXXXXXXDLSPR 60
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL
Sbjct 61 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 120
Query 168 PKGF 171
PKGF
Sbjct 121 PKGF 124
>7vbd_D D Nucleoprotein
Length=127
Score = 235 bits (599), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 118/126 (94%), Positives = 118/126 (94%), Gaps = 0/126 (0%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRR KDLSPRW
Sbjct 2 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRXXXXXXXXKDLSPRW 61
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP
Sbjct 62 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 121
Query 169 KGFYAE 174
KGFYAE
Sbjct 122 KGFYAE 127
>7uxx_F FFF Nucleoprotein
Length=114
Score = 234 bits (597), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)
Query 255 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 314
SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF
Sbjct 5 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 64
Query 315 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 65 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7vbf_B B Nucleoprotein
Length=116
Score = 234 bits (597), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)
Query 255 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 314
SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF
Sbjct 7 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 66
Query 315 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 67 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 116
>7ce0_A A Nucleoprotein
Length=116
Score = 234 bits (597), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)
Query 255 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 314
SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF
Sbjct 7 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 66
Query 315 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 67 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 116
>7ce0_D D Nucleoprotein
Length=116
Score = 234 bits (597), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)
Query 255 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 314
SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF
Sbjct 7 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 66
Query 315 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 67 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 116
>7ce0_B B Nucleoprotein
Length=116
Score = 234 bits (597), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)
Query 255 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 314
SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF
Sbjct 7 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 66
Query 315 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 67 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 116
>7ce0_C C Nucleoprotein
Length=116
Score = 234 bits (597), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)
Query 255 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 314
SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF
Sbjct 7 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 66
Query 315 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 67 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 116
>6wzo_D D Nucleoprotein
Length=121
Score = 234 bits (597), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)
Query 255 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 314
SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF
Sbjct 12 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 71
Query 315 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 72 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 121
>7ylb_K K Nucleoprotein
Length=122
Score = 234 bits (597), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)
Query 255 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 314
SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF
Sbjct 13 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 72
Query 315 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 73 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 122
>7ylb_D A Nucleoprotein
Length=122
Score = 234 bits (597), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)
Query 255 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 314
SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF
Sbjct 13 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 72
Query 315 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 73 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 122
>7ylb_J J Nucleoprotein
Length=122
Score = 234 bits (596), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)
Query 254 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 313
ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA
Sbjct 12 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 71
Query 314 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF 363
FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF
Sbjct 72 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF 121
>7uxx_A AAA Nucleoprotein
Length=114
Score = 233 bits (593), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 6 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 65
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 66 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7uxx_D DDD Nucleoprotein
Length=114
Score = 233 bits (593), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 6 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 65
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 66 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7uxz_D DDD Nucleoprotein
Length=114
Score = 233 bits (593), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 6 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 65
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 66 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7uxz_A AAA Nucleoprotein
Length=114
Score = 233 bits (593), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 6 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 65
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 66 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7uxx_E EEE Nucleoprotein
Length=114
Score = 233 bits (593), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 6 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 65
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 66 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7uxx_C CCC Nucleoprotein
Length=114
Score = 233 bits (593), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 6 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 65
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 66 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7uxx_B BBB Nucleoprotein
Length=114
Score = 233 bits (593), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 6 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 65
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 66 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7uxz_F FFF Nucleoprotein
Length=114
Score = 233 bits (593), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 6 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 65
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 66 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7uxz_E EEE Nucleoprotein
Length=114
Score = 233 bits (593), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 6 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 65
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 66 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7uxz_C CCC Nucleoprotein
Length=114
Score = 233 bits (593), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 6 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 65
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 66 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7uxz_B BBB Nucleoprotein
Length=114
Score = 233 bits (593), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 6 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 65
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 66 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 114
>7c22_A A Nucleoprotein
Length=120
Score = 233 bits (593), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 12 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 71
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 72 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 120
>7xxk_E E Nucleoprotein
Length=120
Score = 233 bits (593), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 12 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 71
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 72 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 120
>7xxk_D D Nucleoprotein
Length=120
Score = 233 bits (593), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 12 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 71
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 72 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 120
>7xxk_A A Nucleoprotein
Length=120
Score = 233 bits (593), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 12 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 71
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 72 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 120
>2cjr_D D NUCLEOCAPSID PROTEIN
Length=128
Score = 233 bits (593), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 110/115 (96%), Positives = 111/115 (97%), Gaps = 0/115 (0%)
Query 250 SAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAP 309
SAAEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAP
Sbjct 14 SAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAP 73
Query 310 SASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
SASAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 74 SASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 128
>2cjr_A A NUCLEOCAPSID PROTEIN
Length=128
Score = 233 bits (593), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 110/115 (96%), Positives = 111/115 (97%), Gaps = 0/115 (0%)
Query 250 SAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAP 309
SAAEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAP
Sbjct 14 SAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAP 73
Query 310 SASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
SASAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 74 SASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 128
>7sts_C C Nucleoprotein
Length=130
Score = 233 bits (593), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 111/125 (89%), Positives = 111/125 (89%), Gaps = 0/125 (0%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRR LSPRW
Sbjct 6 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRXXXXXXXXXXXXXXLSPRW 65
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP
Sbjct 66 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 125
Query 169 KGFYA 173
KGFYA
Sbjct 126 KGFYA 130
>7ylb_G G Nucleoprotein
Length=122
Score = 232 bits (592), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 255 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 314
SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF
Sbjct 13 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 72
Query 315 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF 363
FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF
Sbjct 73 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF 121
>7o05_A A Nucleoprotein
Length=136
Score = 233 bits (593), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 28 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 87
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 88 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>7o36_B B Nucleoprotein
Length=136
Score = 233 bits (593), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 28 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 87
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 88 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>7o35_D D Nucleoprotein
Length=136
Score = 233 bits (593), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 28 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 87
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 88 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>7o05_B B Nucleoprotein
Length=136
Score = 233 bits (593), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 109/109 (100%), Positives = 109/109 (100%), Gaps = 0/109 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 28 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 87
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 88 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 136
>7vbe_A A Nucleoprotein
Length=108
Score = 231 bits (588), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 1 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 60
Query 317 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 61 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 108
>7de1_A A Nucleoprotein
Length=115
Score = 231 bits (588), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 8 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 67
Query 317 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 68 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 115
>7c22_D D Nucleoprotein
Length=120
Score = 231 bits (588), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 13 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 72
Query 317 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 73 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 120
>6wji_A A Nucleoprotein
Length=121
Score = 231 bits (588), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 14 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 73
Query 317 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 74 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 121
>6wzo_C C Nucleoprotein
Length=121
Score = 231 bits (588), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 14 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 73
Query 317 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 74 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 121
>6wzo_A A Nucleoprotein
Length=121
Score = 231 bits (588), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 14 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 73
Query 317 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 74 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 121
>6wji_F F Nucleoprotein
Length=121
Score = 231 bits (588), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 14 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 73
Query 317 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 74 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 121
>6wji_E E Nucleoprotein
Length=121
Score = 231 bits (588), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 14 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 73
Query 317 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 74 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 121
>6wji_D D Nucleoprotein
Length=121
Score = 231 bits (588), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 14 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 73
Query 317 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 74 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 121
>6wji_C C Nucleoprotein
Length=121
Score = 231 bits (588), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 14 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 73
Query 317 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 74 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 121
>6wji_B B Nucleoprotein
Length=121
Score = 231 bits (588), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 14 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 73
Query 317 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 74 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 121
>7r98_B B Nucleoprotein
Length=127
Score = 231 bits (588), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 116/126 (92%), Positives = 116/126 (92%), Gaps = 0/126 (0%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRR LSPRW
Sbjct 2 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRXXXXXXXXXXLSPRW 61
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP
Sbjct 62 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 121
Query 169 KGFYAE 174
KGFYAE
Sbjct 122 KGFYAE 127
>7ylb_A C Nucleoprotein
Length=122
Score = 230 bits (587), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 14 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 73
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF 363
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF
Sbjct 74 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF 121
>7n3d_C C Nucleoprotein
Length=130
Score = 230 bits (586), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 110/123 (89%), Positives = 110/123 (89%), Gaps = 0/123 (0%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRAT SPRW
Sbjct 6 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATXXXXXXXXXXXXXSPRW 65
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP
Sbjct 66 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 125
Query 169 KGF 171
KGF
Sbjct 126 KGF 128
>2cjr_C C NUCLEOCAPSID PROTEIN
Length=128
Score = 229 bits (584), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 108/113 (96%), Positives = 109/113 (96%), Gaps = 0/113 (0%)
Query 252 AEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSA 311
AEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSA
Sbjct 16 AEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSA 75
Query 312 SAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
SAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 76 SAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 128
>2cjr_B B NUCLEOCAPSID PROTEIN
Length=128
Score = 229 bits (584), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 108/113 (96%), Positives = 109/113 (96%), Gaps = 0/113 (0%)
Query 252 AEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSA 311
AEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSA
Sbjct 16 AEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSA 75
Query 312 SAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
SAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 76 SAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 128
>7vbd_B B Nucleoprotein
Length=127
Score = 229 bits (584), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 117/124 (94%), Positives = 117/124 (94%), Gaps = 0/124 (0%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIR MKDLSPR
Sbjct 1 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRXXXXXMKDLSPR 60
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLP TTL
Sbjct 61 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPXXTTL 120
Query 168 PKGF 171
PKGF
Sbjct 121 PKGF 124
>7xxk_B B Nucleoprotein
Length=120
Score = 229 bits (583), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 107/107 (100%), Positives = 107/107 (100%), Gaps = 0/107 (0%)
Query 258 PRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGM 317
PRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGM
Sbjct 14 PRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGM 73
Query 318 SRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
SRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 74 SRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 120
>7vbe_B B Nucleoprotein
Length=108
Score = 228 bits (582), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 107/107 (100%), Positives = 107/107 (100%), Gaps = 0/107 (0%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 1 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 60
Query 317 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF 363
MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF
Sbjct 61 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF 107
>7uw3_D D Nucleoprotein
Length=136
Score = 229 bits (585), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 110/125 (88%), Positives = 110/125 (88%), Gaps = 0/125 (0%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
TASWFTALT DLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRG KDLSPRW
Sbjct 11 TASWFTALTXXXXXDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGXXXXXKDLSPRW 70
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLP P
Sbjct 71 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPXXXXXP 130
Query 169 KGFYA 173
KGFYA
Sbjct 131 KGFYA 135
>7xxk_C C Nucleoprotein
Length=120
Score = 228 bits (582), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 107/107 (100%), Positives = 107/107 (100%), Gaps = 0/107 (0%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 13 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 72
Query 317 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF 363
MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF
Sbjct 73 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF 119
>7xxk_F F Nucleoprotein
Length=120
Score = 228 bits (582), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 107/107 (100%), Positives = 107/107 (100%), Gaps = 0/107 (0%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 13 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 72
Query 317 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF 363
MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF
Sbjct 73 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF 119
>7f2e_G G Nucleoprotein
Length=108
Score = 228 bits (580), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 107/107 (100%), Positives = 107/107 (100%), Gaps = 0/107 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 2 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 61
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 362
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT
Sbjct 62 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 108
>7f2e_D D Nucleoprotein
Length=108
Score = 228 bits (580), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 107/107 (100%), Positives = 107/107 (100%), Gaps = 0/107 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 2 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 61
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 362
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT
Sbjct 62 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 108
>7f2e_C C Nucleoprotein
Length=108
Score = 228 bits (580), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 107/107 (100%), Positives = 107/107 (100%), Gaps = 0/107 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 2 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 61
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 362
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT
Sbjct 62 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 108
>7f2e_I I Nucleoprotein
Length=108
Score = 228 bits (580), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 107/107 (100%), Positives = 107/107 (100%), Gaps = 0/107 (0%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF
Sbjct 2 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 61
Query 316 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 362
GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT
Sbjct 62 GMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 108
>7f2b_B A Nucleoprotein
Length=106
Score = 226 bits (576), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 106/106 (100%), Positives = 106/106 (100%), Gaps = 0/106 (0%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 1 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 60
Query 317 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 362
MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT
Sbjct 61 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 106
>7f2b_A B Nucleoprotein
Length=106
Score = 226 bits (576), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 106/106 (100%), Positives = 106/106 (100%), Gaps = 0/106 (0%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 1 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 60
Query 317 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 362
MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT
Sbjct 61 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 106
>7f2e_A B Nucleoprotein
Length=108
Score = 226 bits (576), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 106/106 (100%), Positives = 106/106 (100%), Gaps = 0/106 (0%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 3 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 62
Query 317 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 362
MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT
Sbjct 63 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 108
>7f2e_J J Nucleoprotein
Length=108
Score = 226 bits (576), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 106/106 (100%), Positives = 106/106 (100%), Gaps = 0/106 (0%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 3 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 62
Query 317 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 362
MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT
Sbjct 63 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 108
>7f2e_H H Nucleoprotein
Length=108
Score = 226 bits (576), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 106/106 (100%), Positives = 106/106 (100%), Gaps = 0/106 (0%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 3 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 62
Query 317 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 362
MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT
Sbjct 63 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 108
>7f2e_B A Nucleoprotein
Length=108
Score = 226 bits (576), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 106/106 (100%), Positives = 106/106 (100%), Gaps = 0/106 (0%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG
Sbjct 3 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 62
Query 317 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 362
MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT
Sbjct 63 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 108
>2cjr_F F NUCLEOCAPSID PROTEIN
Length=128
Score = 226 bits (577), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 107/112 (96%), Positives = 108/112 (96%), Gaps = 0/112 (0%)
Query 251 AAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPS 310
AAEASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPS
Sbjct 15 AAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPS 74
Query 311 ASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 362
ASAFFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKT
Sbjct 75 ASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKT 126
>2cjr_H H NUCLEOCAPSID PROTEIN
Length=128
Score = 224 bits (570), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 105/110 (95%), Positives = 106/110 (96%), Gaps = 0/110 (0%)
Query 255 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 314
SKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAF
Sbjct 19 SKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAF 78
Query 315 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 79 FGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 128
>2cjr_E E NUCLEOCAPSID PROTEIN
Length=128
Score = 224 bits (570), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 105/110 (95%), Positives = 106/110 (96%), Gaps = 0/110 (0%)
Query 255 SKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAF 314
SKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAF
Sbjct 19 SKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAF 78
Query 315 FGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
FGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFP
Sbjct 79 FGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFP 128
>2og3_A A Nucleocapsid protein
Length=138
Score = 221 bits (564), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 104/125 (83%), Positives = 108/125 (86%), Gaps = 0/125 (0%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
TASWFTALTQHGKE+L+FPRGQGVPINTNS PDDQIGYYRRA LSPRW
Sbjct 14 TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRAXXXXXXXXXXXXXLSPRW 73
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYYLGTGPEA LPYGANK+GI+WVATEGALNTPKDHIGTRNP NNAA VLQLPQGTTLP
Sbjct 74 YFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLP 133
Query 169 KGFYA 173
KGFYA
Sbjct 134 KGFYA 138
>2cjr_G G NUCLEOCAPSID PROTEIN
Length=128
Score = 221 bits (562), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 254 ASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASA 313
ASKKPRQKRTATK YNVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASA
Sbjct 18 ASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASA 77
Query 314 FFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 362
FFGMSRIGMEVTPSGTWLTY GAIKLDDKDP FKD VILLNKHIDAYKT
Sbjct 78 FFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKT 126
>7xwx_A A Nucleoprotein
Length=100
Score = 213 bits (543), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 99/99 (100%), Positives = 99/99 (100%), Gaps = 0/99 (0%)
Query 269 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 328
NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 2 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 61
Query 329 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFPPTE 367
TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFPPTE
Sbjct 62 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFPPTE 100
>6wkp_A A Nucleoprotein
Length=128
Score = 214 bits (544), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 103/124 (83%), Positives = 103/124 (83%), Gaps = 0/124 (0%)
Query 50 ASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWY 109
ASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRA PRWY
Sbjct 5 ASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRAXXXXXXXXXXXXXXXPRWY 64
Query 110 FYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPK 169
FYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTR AIVLQLPQGTTLPK
Sbjct 65 FYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRXXXXXXAIVLQLPQGTTLPK 124
Query 170 GFYA 173
GFYA
Sbjct 125 GFYA 128
>7xwx_B B Nucleoprotein
Length=100
Score = 211 bits (537), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 98/98 (100%), Positives = 98/98 (100%), Gaps = 0/98 (0%)
Query 269 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 328
NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 2 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 61
Query 329 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFPPT 366
TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFPPT
Sbjct 62 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFPPT 99
>7xwx_G G Nucleoprotein
Length=100
Score = 211 bits (537), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 98/98 (100%), Positives = 98/98 (100%), Gaps = 0/98 (0%)
Query 269 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 328
NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 2 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 61
Query 329 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFPPT 366
TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFPPT
Sbjct 62 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFPPT 99
>7xwx_C C Nucleoprotein
Length=100
Score = 211 bits (537), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 98/98 (100%), Positives = 98/98 (100%), Gaps = 0/98 (0%)
Query 269 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 328
NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 2 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 61
Query 329 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFPPT 366
TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFPPT
Sbjct 62 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFPPT 99
>7n0i_A A Nucleoprotein
Length=96
Score = 207 bits (527), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 96/96 (100%), Positives = 96/96 (100%), Gaps = 0/96 (0%)
Query 269 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 328
NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 1 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 60
Query 329 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 61 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 96
>7n0i_B B Nucleoprotein
Length=96
Score = 207 bits (527), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 96/96 (100%), Positives = 96/96 (100%), Gaps = 0/96 (0%)
Query 269 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 328
NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 1 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 60
Query 329 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 61 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 96
>7n0i_L G Nucleoprotein
Length=96
Score = 207 bits (527), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 96/96 (100%), Positives = 96/96 (100%), Gaps = 0/96 (0%)
Query 269 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 328
NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 1 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 60
Query 329 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 61 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 96
>7n0i_G H Nucleoprotein
Length=96
Score = 207 bits (527), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 96/96 (100%), Positives = 96/96 (100%), Gaps = 0/96 (0%)
Query 269 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 328
NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 1 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 60
Query 329 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 61 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 96
>7n0i_F F Nucleoprotein
Length=96
Score = 207 bits (527), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 96/96 (100%), Positives = 96/96 (100%), Gaps = 0/96 (0%)
Query 269 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 328
NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 1 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 60
Query 329 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 61 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 96
>7n0i_E E Nucleoprotein
Length=96
Score = 207 bits (527), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 96/96 (100%), Positives = 96/96 (100%), Gaps = 0/96 (0%)
Query 269 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 328
NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 1 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 60
Query 329 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 61 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 96
>7n0i_D D Nucleoprotein
Length=96
Score = 207 bits (527), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 96/96 (100%), Positives = 96/96 (100%), Gaps = 0/96 (0%)
Query 269 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 328
NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 1 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 60
Query 329 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 61 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 96
>7n0i_C C Nucleoprotein
Length=96
Score = 207 bits (527), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 96/96 (100%), Positives = 96/96 (100%), Gaps = 0/96 (0%)
Query 269 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 328
NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 1 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 60
Query 329 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 61 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 96
>7xwx_F F Nucleoprotein
Length=100
Score = 207 bits (527), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 96/96 (100%), Positives = 96/96 (100%), Gaps = 0/96 (0%)
Query 269 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 328
NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 2 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 61
Query 329 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 62 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 97
>7xwx_D D Nucleoprotein
Length=100
Score = 207 bits (527), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 96/96 (100%), Positives = 96/96 (100%), Gaps = 0/96 (0%)
Query 269 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 328
NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 2 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 61
Query 329 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 62 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 97
>7f2e_E E Nucleoprotein
Length=108
Score = 207 bits (526), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 96/97 (99%), Positives = 96/97 (99%), Gaps = 0/97 (0%)
Query 266 KAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVT 325
KAYNVTQ FGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVT
Sbjct 12 KAYNVTQXFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVT 71
Query 326 PSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 362
PSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT
Sbjct 72 PSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 108
>7f2e_K K Nucleoprotein
Length=108
Score = 207 bits (526), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 96/97 (99%), Positives = 96/97 (99%), Gaps = 0/97 (0%)
Query 266 KAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVT 325
KAYNVTQ FGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVT
Sbjct 12 KAYNVTQXFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVT 71
Query 326 PSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 362
PSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT
Sbjct 72 PSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 108
>7f2e_F F Nucleoprotein
Length=108
Score = 203 bits (517), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 97/106 (92%), Positives = 97/106 (92%), Gaps = 0/106 (0%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
KPRQKR ATKAYNVTQAFGRRGPEQTQGNFGDQELIRQ DYKHWPQIAQFAPSASAFFG
Sbjct 3 KPRQKRXATKAYNVTQAFGRRGPEQTQGNFGDQELIRQXXDYKHWPQIAQFAPSASAFFG 62
Query 317 MSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 362
MSRIGMEVTPSGTWLTYTGAIKLDDK QVILLNKHIDAYKT
Sbjct 63 MSRIGMEVTPSGTWLTYTGAIKLDDKXXXXXXQVILLNKHIDAYKT 108
>2gib_A A Nucleocapsid protein
Length=103
Score = 201 bits (510), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 93/97 (96%), Positives = 94/97 (97%), Gaps = 0/97 (0%)
Query 269 NVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 328
NVTQAFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG
Sbjct 3 NVTQAFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSG 62
Query 329 TWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFPP 365
TWLTY GAIKLDDKDP FKD VILLNKHIDAYKTFPP
Sbjct 63 TWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPP 99
>7xwx_E E Nucleoprotein
Length=100
Score = 199 bits (506), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 92/92 (100%), Positives = 92/92 (100%), Gaps = 0/92 (0%)
Query 273 AFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLT 332
AFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLT
Sbjct 6 AFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLT 65
Query 333 YTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
YTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP
Sbjct 66 YTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 97
>2gib_B B Nucleocapsid protein
Length=103
Score = 199 bits (506), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 92/96 (96%), Positives = 93/96 (97%), Gaps = 0/96 (0%)
Query 273 AFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLT 332
AFGRRGPEQTQGNFGDQ+LIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLT
Sbjct 7 AFGRRGPEQTQGNFGDQDLIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLT 66
Query 333 YTGAIKLDDKDPNFKDQVILLNKHIDAYKTFPPTEP 368
Y GAIKLDDKDP FKD VILLNKHIDAYKTFPPTEP
Sbjct 67 YHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEP 102
>7xwx_H H Nucleoprotein
Length=100
Score = 194 bits (494), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 90/90 (100%), Positives = 90/90 (100%), Gaps = 0/90 (0%)
Query 273 AFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLT 332
AFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLT
Sbjct 6 AFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLT 65
Query 333 YTGAIKLDDKDPNFKDQVILLNKHIDAYKT 362
YTGAIKLDDKDPNFKDQVILLNKHIDAYKT
Sbjct 66 YTGAIKLDDKDPNFKDQVILLNKHIDAYKT 95
>7f2e_L L Nucleoprotein
Length=108
Score = 192 bits (488), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 92/105 (88%), Positives = 92/105 (88%), Gaps = 0/105 (0%)
Query 258 PRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGM 317
PRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIR DYKHWPQIAQFAPSASAFFGM
Sbjct 4 PRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRXXXDYKHWPQIAQFAPSASAFFGM 63
Query 318 SRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKT 362
SRIGMEVTPSGTWLTYTGAI DQVILLNKHIDAYKT
Sbjct 64 SRIGMEVTPSGTWLTYTGAIXXXXXXXXXXDQVILLNKHIDAYKT 108
>4ud1_B B N PROTEIN
Length=164
Score = 161 bits (408), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 95/134 (71%), Gaps = 2/134 (1%)
Query 41 RPQGLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGK 100
+P+ PNNT SW+T LTQHGK L FP GQGVP+N NS+P GY+RR R+I G+G
Sbjct 32 KPRAAPNNTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKINTGNG- 90
Query 101 MKDLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQ 160
+K L+PRWYFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q
Sbjct 91 IKQLAPRWYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQ 149
Query 161 LPQGTTLPKGFYAE 174
GT LPK F+ E
Sbjct 150 FAPGTKLPKNFHIE 163
>4ud1_A A N PROTEIN
Length=164
Score = 161 bits (408), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 95/134 (71%), Gaps = 2/134 (1%)
Query 41 RPQGLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGK 100
+P+ PNNT SW+T LTQHGK L FP GQGVP+N NS+P GY+RR R+I G+G
Sbjct 32 KPRAAPNNTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKINTGNG- 90
Query 101 MKDLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQ 160
+K L+PRWYFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q
Sbjct 91 IKQLAPRWYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQ 149
Query 161 LPQGTTLPKGFYAE 174
GT LPK F+ E
Sbjct 150 FAPGTKLPKNFHIE 163
>4ud1_C C N PROTEIN
Length=164
Score = 161 bits (408), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 95/134 (71%), Gaps = 2/134 (1%)
Query 41 RPQGLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGK 100
+P+ PNNT SW+T LTQHGK L FP GQGVP+N NS+P GY+RR R+I G+G
Sbjct 32 KPRAAPNNTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKINTGNG- 90
Query 101 MKDLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQ 160
+K L+PRWYFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q
Sbjct 91 IKQLAPRWYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQ 149
Query 161 LPQGTTLPKGFYAE 174
GT LPK F+ E
Sbjct 150 FAPGTKLPKNFHIE 163
>6lnn_B B Nucleoprotein
Length=130
Score = 157 bits (397), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 76/129 (59%), Positives = 92/129 (71%), Gaps = 2/129 (2%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NT SW+T LTQHGK L FP GQGVP+N NS+P GY+RR R+I G+G +K L+PR
Sbjct 4 NTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKIXXGNG-IKQLAPR 62
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT L
Sbjct 63 WYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKL 121
Query 168 PKGFYAEGS 176
PK F+ EG+
Sbjct 122 PKNFHIEGT 130
>6lz8_C B Nucleoprotein
Length=130
Score = 157 bits (397), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 76/129 (59%), Positives = 92/129 (71%), Gaps = 2/129 (2%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NT SW+T LTQHGK L FP GQGVP+N NS+P GY+RR R+I G+G +K L+PR
Sbjct 4 NTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKINTGNG-IKQLAPR 62
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT L
Sbjct 63 WYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKL 121
Query 168 PKGFYAEGS 176
PK F+ EG+
Sbjct 122 PKNFHIEGT 130
>6lz6_A A Nucleoprotein
Length=130
Score = 157 bits (397), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 76/129 (59%), Positives = 92/129 (71%), Gaps = 2/129 (2%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NT SW+T LTQHGK L FP GQGVP+N NS+P GY+RR R+I G+G +K L+PR
Sbjct 4 NTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKINTGNG-IKQLAPR 62
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT L
Sbjct 63 WYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKL 121
Query 168 PKGFYAEGS 176
PK F+ EG+
Sbjct 122 PKNFHIEGT 130
>7dyd_B B Nucleoprotein
Length=130
Score = 157 bits (396), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 76/129 (59%), Positives = 92/129 (71%), Gaps = 2/129 (2%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NT SW+T LTQHGK L FP GQGVP+N NS+P GY+RR R+I G+G +K L+PR
Sbjct 4 NTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKINTGNG-IKQLAPR 62
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT L
Sbjct 63 WYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKL 121
Query 168 PKGFYAEGS 176
PK F+ EG+
Sbjct 122 PKNFHIEGT 130
>6lz6_B B Nucleoprotein
Length=130
Score = 157 bits (396), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 76/129 (59%), Positives = 92/129 (71%), Gaps = 2/129 (2%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NT SW+T LTQHGK L FP GQGVP+N NS+P GY+RR R+I G+G +K L+PR
Sbjct 4 NTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKINTGNG-IKQLAPR 62
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT L
Sbjct 63 WYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKL 121
Query 168 PKGFYAEGS 176
PK F+ EG+
Sbjct 122 PKNFHIEGT 130
>7dyd_A A Nucleoprotein
Length=130
Score = 156 bits (395), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 76/128 (59%), Positives = 91/128 (71%), Gaps = 2/128 (2%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NT SW+T LTQHGK L FP GQGVP+N NS+P GY+RR R+I G+G +K L+PR
Sbjct 4 NTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKINTGNG-IKQLAPR 62
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT L
Sbjct 63 WYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKL 121
Query 168 PKGFYAEG 175
PK F+ EG
Sbjct 122 PKNFHIEG 129
>6lz8_A A Nucleoprotein
Length=130
Score = 155 bits (393), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 76/128 (59%), Positives = 90/128 (70%), Gaps = 2/128 (2%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NT SW+T LTQHGK L FP GQGVP+N NS+P GY+RR R+I G G +K L+PR
Sbjct 4 NTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKINTGXG-IKQLAPR 62
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT L
Sbjct 63 WYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKL 121
Query 168 PKGFYAEG 175
PK F+ EG
Sbjct 122 PKNFHIEG 129
>6lnn_A A Nucleoprotein
Length=130
Score = 154 bits (390), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 91/129 (71%), Gaps = 2/129 (2%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NT SW+T LTQHGK L FP GQGVP+N NS+P GY+RR R+I +G +K L+PR
Sbjct 4 NTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKINTXNG-IKQLAPR 62
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT L
Sbjct 63 WYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKL 121
Query 168 PKGFYAEGS 176
PK F+ EG+
Sbjct 122 PKNFHIEGT 130
>6kl5_B B Nucleoprotein
Length=144
Score = 150 bits (378), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 74/128 (58%), Positives = 87/128 (68%), Gaps = 2/128 (2%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NT SW+T LTQHGK L FP GQGVP+N NS+P GY+RR R+I K L+PR
Sbjct 18 NTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKIX-XXXXXKQLAPR 76
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT L
Sbjct 77 WYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKL 135
Query 168 PKGFYAEG 175
PK F+ EG
Sbjct 136 PKNFHIEG 143
>7pku_B B Nucleoprotein
Length=73
Score = 142 bits (358), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 73/73 (100%), Positives = 73/73 (100%), Gaps = 0/73 (0%)
Query 191 RNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESKMSGKGQQQQGQTVTKKS 250
RNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESKMSGKGQQQQGQTVTKKS
Sbjct 1 RNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESKMSGKGQQQQGQTVTKKS 60
Query 251 AAEASKKPRQKRT 263
AAEASKKPRQKRT
Sbjct 61 AAEASKKPRQKRT 73
>6kl6_B B Nucleoprotein
Length=144
Score = 143 bits (360), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 71/126 (56%), Positives = 84/126 (67%), Gaps = 2/126 (2%)
Query 50 ASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWY 109
SW+T LTQHGK L FP GQGVP+N NS+P GY+RR R+I L+PRWY
Sbjct 20 VSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKIXXXX-XXXXLAPRWY 78
Query 110 FYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPK 169
FYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT LPK
Sbjct 79 FYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLPK 137
Query 170 GFYAEG 175
F+ EG
Sbjct 138 NFHIEG 143
>6kl2_B B Nucleoprotein
Length=144
Score = 142 bits (357), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 84/128 (66%), Gaps = 2/128 (2%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NT SW+T LTQHGK L FP GQGVP+N NS+P GY+RR + L+PR
Sbjct 18 NTVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDXXXXXXXXXXQ-LAPR 76
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT L
Sbjct 77 WYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKL 135
Query 168 PKGFYAEG 175
PK F+ EG
Sbjct 136 PKNFHIEG 143
>7dyd_C C Nucleoprotein
Length=130
Score = 140 bits (352), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 83/125 (66%), Gaps = 2/125 (2%)
Query 50 ASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWY 109
SW+T LTQHGK L FP GQGVP+N NS+P GY+RR G+G + +PRWY
Sbjct 6 VSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQXXXXXXGNG-IXQXAPRWY 64
Query 110 FYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPK 169
FYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT LPK
Sbjct 65 FYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLPK 123
Query 170 GFYAE 174
F+ E
Sbjct 124 NFHIE 128
>6kl6_A A Nucleoprotein
Length=144
Score = 140 bits (353), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 70/127 (55%), Positives = 83/127 (65%), Gaps = 2/127 (2%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NT SW+T LTQH K L FP GQGVP+N NS+P GY+RR R+I + L+PR
Sbjct 18 NTVSWYTGLTQHXKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRKIXXXXXXXQ-LAPR 76
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYY GTGPEA LP+ A KDGI+WV A + P GTRNP N++AIV Q GT L
Sbjct 77 WYFYYTGTGPEAALPFRAVKDGIVWVHEXXATDAPST-FGTRNPNNDSAIVTQFAPGTKL 135
Query 168 PKGFYAE 174
PK F+ E
Sbjct 136 PKNFHIE 142
>6kl2_A A Nucleoprotein
Length=144
Score = 139 bits (349), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 70/128 (55%), Positives = 82/128 (64%), Gaps = 2/128 (2%)
Query 48 NTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
NT SW+T LTQH K L FP GQGVP+N NS+P GY+RR L+PR
Sbjct 18 NTVSWYTGLTQHXKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDXX-XXXXXXXXXLAPR 76
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
WYFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT L
Sbjct 77 WYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKL 135
Query 168 PKGFYAEG 175
PK F+ EG
Sbjct 136 PKNFHIEG 143
>6kl5_A A Nucleoprotein
Length=144
Score = 138 bits (347), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 82/125 (66%), Gaps = 2/125 (2%)
Query 50 ASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWY 109
SW+T LTQHGK L FP GQGVP+N NS+P GY+RR R + L+PRWY
Sbjct 20 VSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDRXXXXXXXXXQ-LAPRWY 78
Query 110 FYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPK 169
FYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT LPK
Sbjct 79 FYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLPK 137
Query 170 GFYAE 174
F+ E
Sbjct 138 NFHIE 142
>6lnn_C C Nucleoprotein
Length=130
Score = 137 bits (345), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 69/126 (55%), Positives = 82/126 (65%), Gaps = 2/126 (2%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
T SW+T LTQHGK L FP GQGVP+N NS+P GY+RR + L+PRW
Sbjct 5 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDXXXXXXXXXXQ-LAPRW 63
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT LP
Sbjct 64 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 122
Query 169 KGFYAE 174
K F+ E
Sbjct 123 KNFHIE 128
>6lz6_C C Nucleoprotein
Length=130
Score = 137 bits (345), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 69/126 (55%), Positives = 82/126 (65%), Gaps = 2/126 (2%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
T SW+T LTQHGK L FP GQGVP+N NS+P GY+RR + L+PRW
Sbjct 5 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDXXXXXXXXXXQ-LAPRW 63
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT LP
Sbjct 64 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 122
Query 169 KGFYAE 174
K F+ E
Sbjct 123 KNFHIE 128
>6lz8_D D Nucleoprotein
Length=130
Score = 137 bits (344), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 81/127 (64%), Gaps = 2/127 (2%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
T SW+T LTQHGK L FP GQGVP+N NS+P GY+RR +PRW
Sbjct 5 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQXXXXXXXX-XXXXXAPRW 63
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT LP
Sbjct 64 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 122
Query 169 KGFYAEG 175
K F+ EG
Sbjct 123 KNFHIEG 129
>6kl6_D D Nucleoprotein
Length=144
Score = 137 bits (344), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 81/127 (64%), Gaps = 2/127 (2%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
T SW+T LTQHGK L FP GQGVP+N NS+P GY+RR +PRW
Sbjct 19 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRXXXXXXXXX-XXXXXAPRW 77
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT LP
Sbjct 78 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 136
Query 169 KGFYAEG 175
K F+ EG
Sbjct 137 KNFHIEG 143
>6lz8_B C Nucleoprotein
Length=130
Score = 135 bits (340), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 68/126 (54%), Positives = 80/126 (63%), Gaps = 2/126 (2%)
Query 50 ASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWY 109
SW+T LTQHGK L FP GQGVP+N NS+P GY+RR +PRWY
Sbjct 6 VSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRXXXXXXXXX-XXXXXAPRWY 64
Query 110 FYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPK 169
FYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT LPK
Sbjct 65 FYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLPK 123
Query 170 GFYAEG 175
F+ EG
Sbjct 124 NFHIEG 129
>7dyd_D D Nucleoprotein
Length=130
Score = 135 bits (340), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 68/126 (54%), Positives = 80/126 (63%), Gaps = 2/126 (2%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
T SW+T LTQHGK L FP GQGVP+N NS+P GY+R L+PRW
Sbjct 5 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRXXXXX-XXXXXXXXXLAPRW 63
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT LP
Sbjct 64 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 122
Query 169 KGFYAE 174
K F+ E
Sbjct 123 KNFHIE 128
>6lnn_D D Nucleoprotein
Length=130
Score = 135 bits (339), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 68/126 (54%), Positives = 80/126 (63%), Gaps = 2/126 (2%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
T SW+T LTQHGK L FP GQGVP+N NS+P GY+RR +PRW
Sbjct 5 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQXXXXXXXX-XXXXXAPRW 63
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT LP
Sbjct 64 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 122
Query 169 KGFYAE 174
K F+ E
Sbjct 123 KNFHIE 128
>4ud1_D D N PROTEIN
Length=164
Score = 134 bits (338), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 68/126 (54%), Positives = 80/126 (63%), Gaps = 2/126 (2%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
T SW+T LTQHGK L FP GQGVP+N NS+P GY+RR +PRW
Sbjct 40 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQDXXXXXXX-XXXXXAPRW 98
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT LP
Sbjct 99 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 157
Query 169 KGFYAE 174
K F+ E
Sbjct 158 KNFHIE 163
>6kl6_C C Nucleoprotein
Length=144
Score = 134 bits (336), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/127 (54%), Positives = 79/127 (62%), Gaps = 2/127 (2%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
T SW+T LTQHGK L FP GQGVP+N NS+P GY+RR PRW
Sbjct 19 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQXXXXXXXX-XXXXXXPRW 77
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT LP
Sbjct 78 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 136
Query 169 KGFYAEG 175
F+ EG
Sbjct 137 XXFHIEG 143
>6lz6_D D Nucleoprotein
Length=130
Score = 132 bits (333), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 79/126 (63%), Gaps = 2/126 (2%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
T SW+T LTQHGK L FP GQGVP+N NS+P GY+RR +PRW
Sbjct 5 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQXXX-XXXXXXXXXXAPRW 63
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYY GTGPEA LP+ A KD I+WV +GA + P GTRNP N++AIV Q GT LP
Sbjct 64 YFYYTGTGPEAALPFRAVKDXIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 122
Query 169 KGFYAE 174
K F+ E
Sbjct 123 KNFHIE 128
>4ud1_E E N PROTEIN
Length=164
Score = 131 bits (330), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 78/126 (62%), Gaps = 2/126 (2%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
T SW+T LTQHGK L FP GQGVP+N NS+P GY+ R PRW
Sbjct 40 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWXRQDXXXXXXX-XXXXXXPRW 98
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT LP
Sbjct 99 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 157
Query 169 KGFYAE 174
K F+ E
Sbjct 158 KNFHIE 163
>6kl5_D D Nucleoprotein
Length=144
Score = 129 bits (325), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 66/121 (55%), Positives = 76/121 (63%), Gaps = 2/121 (2%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
T SW+T LTQHGK L FP GQGVP+N NS+P GY+RR PRW
Sbjct 19 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQXXXXXXXX-XXXXXXPRW 77
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT LP
Sbjct 78 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 136
Query 169 K 169
K
Sbjct 137 K 137
>6kl2_D D Nucleoprotein
Length=144
Score = 127 bits (319), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 75/120 (63%), Gaps = 2/120 (2%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
T SW+T LTQHGK L FP GQGVP+N NS+P GY+RR PRW
Sbjct 19 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQXXXXXXXX-XXXXXXPRW 77
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT LP
Sbjct 78 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 136
>6kl2_C C Nucleoprotein
Length=144
Score = 127 bits (319), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 75/120 (63%), Gaps = 2/120 (2%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
T SW+T LTQHGK L FP GQGVP+N NS+P GY+RR PRW
Sbjct 19 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQXXXXXXXX-XXXXXXPRW 77
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT LP
Sbjct 78 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 136
>6kl5_C C Nucleoprotein
Length=144
Score = 124 bits (312), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 74/120 (62%), Gaps = 2/120 (2%)
Query 49 TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRW 108
T SW+T LTQHGK L FP GQGVP+N NS+P GY+RR RW
Sbjct 19 TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQXXXXXXXXXXXXXXX-RW 77
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYY GTGPEA LP+ A KDGI+WV +GA + P GTRNP N++AIV Q GT LP
Sbjct 78 YFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGTRNPNNDSAIVTQFAPGTKLP 136
>7n45_A A Nucleoprotein
Length=138
Score = 117 bits (294), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 79/129 (61%), Gaps = 4/129 (3%)
Query 51 SWFTALTQHGK-EDLKFPRGQGVPINTNSSPDDQIGYYRRATRR-IRGGDGKMKDLSPRW 108
SWF+ +TQ K D KF GQGVPI P + GY+ R +RR + DG+ K L PRW
Sbjct 8 SWFSGITQFQKGRDFKFSDGQGVPIAFGVPPSEAKGYWYRHSRRSFKTADGQQKQLLPRW 67
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGA-LNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
YFYYLGTGP A YG + +G+ WVA A +TP D + +R+P AI + P GT L
Sbjct 68 YFYYLGTGPYANASYGESLEGVFWVANHQADTSTPSD-VSSRDPTTQEAIPTRFPPGTIL 126
Query 168 PKGFYAEGS 176
P+G+Y EGS
Sbjct 127 PQGYYVEGS 135
>6g13_C C Nucleoprotein
Length=126
Score = 115 bits (289), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 59/114 (52%), Positives = 78/114 (68%), Gaps = 6/114 (5%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
K R KRT+TK++N+ QAFG RGP QGNFGD +L + GT+ WPQIA+ AP+ASAF G
Sbjct 13 KMRHKRTSTKSFNMVQAFGLRGPGDLQGNFGDLQLNKLGTEDPRWPQIAELAPTASAFMG 72
Query 317 MSRIGM------EVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
MS+ + + +L Y+GAIKLD K+PN+ + LL ++IDAYKTFP
Sbjct 73 MSQFKLTHQNNDDXGNPVYFLRYSGAIKLDPKNPNYNKWLELLEQNIDAYKTFP 126
>6g13_B B Nucleoprotein
Length=126
Score = 115 bits (289), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 59/114 (52%), Positives = 78/114 (68%), Gaps = 6/114 (5%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
K R KRT+TK++N+ QAFG RGP QGNFGD +L + GT+ WPQIA+ AP+ASAF G
Sbjct 13 KMRHKRTSTKSFNMVQAFGLRGPGDLQGNFGDLQLNKLGTEDPRWPQIAELAPTASAFMG 72
Query 317 MSRIGM------EVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
MS+ + + +L Y+GAIKLD K+PN+ + LL ++IDAYKTFP
Sbjct 73 MSQFKLTHQNNDDXGNPVYFLRYSGAIKLDPKNPNYNKWLELLEQNIDAYKTFP 126
>6g13_D D Nucleoprotein
Length=126
Score = 115 bits (288), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 59/114 (52%), Positives = 78/114 (68%), Gaps = 6/114 (5%)
Query 257 KPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFG 316
K R KRT+TK++N+ QAFG RGP QGNFGD +L + GT+ WPQIA+ AP+ASAF G
Sbjct 13 KMRHKRTSTKSFNMVQAFGLRGPGDLQGNFGDLQLNKLGTEDPRWPQIAELAPTASAFMG 72
Query 317 MSRIGM------EVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
MS+ + + +L Y+GAIKLD K+PN+ + LL ++IDAYKTFP
Sbjct 73 MSQFKLTHQNNDDXGNPVYFLRYSGAIKLDPKNPNYNKWLELLEQNIDAYKTFP 126
>6g13_A A Nucleoprotein
Length=126
Score = 115 bits (287), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/112 (52%), Positives = 77/112 (69%), Gaps = 6/112 (5%)
Query 259 RQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMS 318
R KRT+TK++N+ QAFG RGP QGNFGD +L + GT+ WPQIA+ AP+ASAF GMS
Sbjct 15 RHKRTSTKSFNMVQAFGLRGPGDLQGNFGDLQLNKLGTEDPRWPQIAELAPTASAFMGMS 74
Query 319 RIGM------EVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
+ + + +L Y+GAIKLD K+PN+ + LL ++IDAYKTFP
Sbjct 75 QFKLTHQNNDDXGNPVYFLRYSGAIKLDPKNPNYNKWLELLEQNIDAYKTFP 126
>3hd4_A A Nucleoprotein
Length=139
Score = 115 bits (287), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 78/128 (61%), Gaps = 2/128 (2%)
Query 51 SWFTALTQHGK-EDLKFPRGQGVPINTNSSPDDQIGYYRRATRR-IRGGDGKMKDLSPRW 108
SWF+ +TQ K ++ +F GQGVPI +Q GY+ R RR + DG+ K L PRW
Sbjct 9 SWFSGITQFQKGKEFQFAEGQGVPIANGIPASEQKGYWYRHNRRSFKTPDGQQKQLLPRW 68
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLP 168
YFYYLGTGP AG YG + +G+ WVA A + I R+P+++ AI + GT LP
Sbjct 69 YFYYLGTGPHAGASYGDSIEGVFWVANSQADTNTRSDIVERDPSSHEAIPTRFAPGTVLP 128
Query 169 KGFYAEGS 176
+GFY EGS
Sbjct 129 QGFYVEGS 136
>4kxj_A A Nucleoprotein
Length=136
Score = 112 bits (281), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 81/129 (63%), Gaps = 4/129 (3%)
Query 51 SWFTALTQHGK-EDLKFPRGQGVPINTNSSPDDQIGYYRRATRR-IRGGDGKMKDLSPRW 108
SWF+ +TQ K ++ +F GQGVPI + GY+ R RR + DG + L PRW
Sbjct 9 SWFSGITQFQKGKEFEFVEGQGVPIAPGVPATEAKGYWYRHNRRSFKTADGXQRQLLPRW 68
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGA-LNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
YFYYLGTGP A YG + DG+ WVA+ A +NTP D I R+P+++ AI + P GT L
Sbjct 69 YFYYLGTGPHAKDQYGTDIDGVYWVASNQADVNTPAD-IVDRDPSSDEAIPTRFPPGTVL 127
Query 168 PKGFYAEGS 176
P+G+Y EGS
Sbjct 128 PQGYYIEGS 136
>4lmt_A A Nucleoprotein
Length=136
Score = 111 bits (278), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 80/129 (62%), Gaps = 4/129 (3%)
Query 51 SWFTALTQHGK-EDLKFPRGQGVPINTNSSPDDQIGYYRRATRR-IRGGDGKMKDLSPRW 108
SWF+ +TQ K ++ +F GQGVPI + GY+ R RR + DG L PRW
Sbjct 9 SWFSGITQFQKGKEFEFVEGQGVPIAPGVPATEAKGYWYRHNRRSFKTADGNXXQLLPRW 68
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGA-LNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
YFYYLGTGP A YG + DG+ WVA+ A +NTP D I R+P+++ AI + P GT L
Sbjct 69 YFYYLGTGPHAKDQYGTDIDGVYWVASNQADVNTPAD-IVDRDPSSDEAIPTRFPPGTVL 127
Query 168 PKGFYAEGS 176
P+G+Y EGS
Sbjct 128 PQGYYIEGS 136
>4lm7_A A Nucleoprotein
Length=136
Score = 111 bits (278), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 80/129 (62%), Gaps = 4/129 (3%)
Query 51 SWFTALTQHGK-EDLKFPRGQGVPINTNSSPDDQIGYYRRATRR-IRGGDGKMKDLSPRW 108
SWF+ +TQ K ++ +F GQGVPI + GY+ R RR + DG L PRW
Sbjct 9 SWFSGITQFQKGKEFEFVEGQGVPIAPGVPATEAKGYWYRHNRRSFKTADGXXXQLLPRW 68
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGA-LNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
YFYYLGTGP A YG + DG+ WVA+ A +NTP D I R+P+++ AI + P GT L
Sbjct 69 YFYYLGTGPHAKDQYGTDIDGVYWVASNQADVNTPAD-IVDRDPSSDEAIPTRFPPGTVL 127
Query 168 PKGFYAEGS 176
P+G+Y EGS
Sbjct 128 PQGYYIEGS 136
>4li4_A A Nucleoprotein
Length=136
Score = 111 bits (278), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 80/129 (62%), Gaps = 4/129 (3%)
Query 51 SWFTALTQHGK-EDLKFPRGQGVPINTNSSPDDQIGYYRRATRR-IRGGDGKMKDLSPRW 108
SWF+ +TQ K ++ +F GQGVPI + GY+ R RR + DG L PRW
Sbjct 9 SWFSGITQFQKGKEFEFVEGQGVPIAPGVPATEAKGYWYRHNRRSFKTADGXXXQLLPRW 68
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGA-LNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
YFYYLGTGP A YG + DG+ WVA+ A +NTP D I R+P+++ AI + P GT L
Sbjct 69 YFYYLGTGPHAKDQYGTDIDGVYWVASNQADVNTPAD-IVDRDPSSDEAIPTRFPPGTVL 127
Query 168 PKGFYAEGS 176
P+G+Y EGS
Sbjct 128 PQGYYIEGS 136
>4j3k_A A Nucleoprotein
Length=136
Score = 111 bits (278), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 80/129 (62%), Gaps = 4/129 (3%)
Query 51 SWFTALTQHGK-EDLKFPRGQGVPINTNSSPDDQIGYYRRATRR-IRGGDGKMKDLSPRW 108
SWF+ +TQ K ++ +F GQGVPI + GY+ R RR + DG L PRW
Sbjct 9 SWFSGITQFQKGKEFEFVEGQGVPIAPGVPATEAKGYWYRHNRRSFKTADGXXXQLLPRW 68
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGA-LNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
YFYYLGTGP A YG + DG+ WVA+ A +NTP D I R+P+++ AI + P GT L
Sbjct 69 YFYYLGTGPHAKDQYGTDIDGVYWVASNQADVNTPAD-IVDRDPSSDEAIPTRFPPGTVL 127
Query 168 PKGFYAEGS 176
P+G+Y EGS
Sbjct 128 PQGYYIEGS 136
>4lmc_A A Nucleoprotein
Length=135
Score = 109 bits (273), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/128 (47%), Positives = 79/128 (62%), Gaps = 4/128 (3%)
Query 51 SWFTALTQHGK-EDLKFPRGQGVPINTNSSPDDQIGYYRRATRR-IRGGDGKMKDLSPRW 108
SWF+ +TQ K ++ +F GQGVPI + GY+ R RR + DG L PRW
Sbjct 9 SWFSGITQFQKGKEFEFVEGQGVPIAPGVPATEAKGYWYRHNRRSFKTADGXXXQLLPRW 68
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGA-LNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
YFYYLGTGP A YG + DG+ WVA+ A +NTP D I R+P+++ AI + P GT L
Sbjct 69 YFYYLGTGPHAKDQYGTDIDGVYWVASNQADVNTPAD-IVDRDPSSDEAIPTRFPPGTVL 127
Query 168 PKGFYAEG 175
P+G+Y EG
Sbjct 128 PQGYYIEG 135
>4lm9_A A Nucleoprotein
Length=135
Score = 109 bits (273), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/128 (47%), Positives = 79/128 (62%), Gaps = 4/128 (3%)
Query 51 SWFTALTQHGK-EDLKFPRGQGVPINTNSSPDDQIGYYRRATRR-IRGGDGKMKDLSPRW 108
SWF+ +TQ K ++ +F GQGVPI + GY+ R RR + DG L PRW
Sbjct 9 SWFSGITQFQKGKEFEFVEGQGVPIAPGVPATEAKGYWYRHNRRSFKTADGXXXQLLPRW 68
Query 109 YFYYLGTGPEAGLPYGANKDGIIWVATEGA-LNTPKDHIGTRNPANNAAIVLQLPQGTTL 167
YFYYLGTGP A YG + DG+ WVA+ A +NTP D I R+P+++ AI + P GT L
Sbjct 69 YFYYLGTGPHAKDQYGTDIDGVYWVASNQADVNTPAD-IVDRDPSSDEAIPTRFPPGTVL 127
Query 168 PKGFYAEG 175
P+G+Y EG
Sbjct 128 PQGYYIEG 135
>2gec_A A Nucleocapsid protein
Length=139
Score = 77.4 bits (189), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 67/127 (53%), Gaps = 4/127 (3%)
Query 40 RRPQGLPNNTASWFTALT--QHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGG 97
R P+ + ASWF A+ + KF G GVP N N Q GY+RR R + G
Sbjct 2 RPPKVGSSGNASWFQAIKAKKLNSPQPKF-EGSGVPDNENLKTSQQHGYWRRQAR-FKPG 59
Query 98 DGKMKDLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAI 157
G+ K + WYFYY GTGP A L +G ++DGI+WVA +GA + + GTR+P
Sbjct 60 KGRRKPVPDAWYFYYTGTGPAADLNWGDSQDGIVWVAAKGADVKSRSNQGTRDPDKFDQY 119
Query 158 VLQLPQG 164
L+ G
Sbjct 120 PLRFSDG 126
>2gec_B B Nucleocapsid protein
Length=139
Score = 77.4 bits (189), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 67/127 (53%), Gaps = 4/127 (3%)
Query 40 RRPQGLPNNTASWFTALT--QHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGG 97
R P+ + ASWF A+ + KF G GVP N N Q GY+RR R + G
Sbjct 2 RPPKVGSSGNASWFQAIKAKKLNSPQPKF-EGSGVPDNENLKTSQQHGYWRRQAR-FKPG 59
Query 98 DGKMKDLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAI 157
G+ K + WYFYY GTGP A L +G ++DGI+WVA +GA + + GTR+P
Sbjct 60 KGRRKPVPDAWYFYYTGTGPAADLNWGDSQDGIVWVAAKGADVKSRSNQGTRDPDKFDQY 119
Query 158 VLQLPQG 164
L+ G
Sbjct 120 PLRFSDG 126
>2c86_A A NUCLEOCAPSID PROTEIN
Length=134
Score = 76.6 bits (187), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 62/117 (53%), Gaps = 4/117 (3%)
Query 50 ASWFTALTQHGKEDLKFPR--GQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
ASWF A+ K + P+ G GVP N N P Q GY+RR R + G G +
Sbjct 7 ASWFQAIKAK-KLNTPPPKFEGSGVPDNENIKPSQQHGYWRRQAR-FKPGKGGRCPVPDA 64
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQG 164
WYFYY GTGP A L +G +DGI+WVA +GA + + GTR+P L+ G
Sbjct 65 WYFYYTGTGPAADLNWGDTQDGIVWVAAKGADTKSRSNQGTRDPDKFDQYPLRFSDG 121
>2c86_B B NUCLEOCAPSID PROTEIN
Length=134
Score = 76.6 bits (187), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 62/117 (53%), Gaps = 4/117 (3%)
Query 50 ASWFTALTQHGKEDLKFPR--GQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
ASWF A+ K + P+ G GVP N N P Q GY+RR R + G G +
Sbjct 7 ASWFQAIKAK-KLNTPPPKFEGSGVPDNENIKPSQQHGYWRRQAR-FKPGKGGRCPVPDA 64
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQG 164
WYFYY GTGP A L +G +DGI+WVA +GA + + GTR+P L+ G
Sbjct 65 WYFYYTGTGPAADLNWGDTQDGIVWVAAKGADTKSRSNQGTRDPDKFDQYPLRFSDG 121
>2bxx_B B NUCLEOCAPSID PROTEIN
Length=134
Score = 76.6 bits (187), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 62/117 (53%), Gaps = 4/117 (3%)
Query 50 ASWFTALTQHGKEDLKFPR--GQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
ASWF A+ K + P+ G GVP N N P Q GY+RR R + G G +
Sbjct 7 ASWFQAIKAK-KLNTPPPKFEGSGVPDNENIKPSQQHGYWRRQAR-FKPGKGGRCPVPDA 64
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQG 164
WYFYY GTGP A L +G +DGI+WVA +GA + + GTR+P L+ G
Sbjct 65 WYFYYTGTGPAADLNWGDTQDGIVWVAAKGADTKSRSNQGTRDPDKFDQYPLRFSDG 121
>2bxx_A A NUCLEOCAPSID PROTEIN
Length=134
Score = 76.6 bits (187), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 62/117 (53%), Gaps = 4/117 (3%)
Query 50 ASWFTALTQHGKEDLKFPR--GQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
ASWF A+ K + P+ G GVP N N P Q GY+RR R + G G +
Sbjct 7 ASWFQAIKAK-KLNTPPPKFEGSGVPDNENIKPSQQHGYWRRQAR-FKPGKGGRCPVPDA 64
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQG 164
WYFYY GTGP A L +G +DGI+WVA +GA + + GTR+P L+ G
Sbjct 65 WYFYYTGTGPAADLNWGDTQDGIVWVAAKGADTKSRSNQGTRDPDKFDQYPLRFSDG 121
>2btl_B B INFECTIOUS BRONCHITIS VIRUS NUCLEOCAPSID PROTEIN
Length=134
Score = 75.1 bits (183), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 62/117 (53%), Gaps = 4/117 (3%)
Query 50 ASWFTALTQHGKEDLKFPR--GQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
ASWF A+ K + P+ G GVP N N P Q GY+RR R + G G +
Sbjct 7 ASWFQAIKAK-KLNTPPPKFEGSGVPDNENMKPSQQHGYWRRQAR-FKPGKGGRCPVPDA 64
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQG 164
WYFYY GTGP A + +G +DGI+W+A +GA + + GTR+P L+ G
Sbjct 65 WYFYYTGTGPAADMNWGDTQDGIVWMAAKGADTKSRSNQGTRDPDKFDQYPLRFSDG 121
>2btl_A A INFECTIOUS BRONCHITIS VIRUS NUCLEOCAPSID PROTEIN
Length=134
Score = 75.1 bits (183), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 62/117 (53%), Gaps = 4/117 (3%)
Query 50 ASWFTALTQHGKEDLKFPR--GQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPR 107
ASWF A+ K + P+ G GVP N N P Q GY+RR R + G G +
Sbjct 7 ASWFQAIKAK-KLNTPPPKFEGSGVPDNENMKPSQQHGYWRRQAR-FKPGKGGRCPVPDA 64
Query 108 WYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQG 164
WYFYY GTGP A + +G +DGI+W+A +GA + + GTR+P L+ G
Sbjct 65 WYFYYTGTGPAADMNWGDTQDGIVWMAAKGADTKSRSNQGTRDPDKFDQYPLRFSDG 121
>5epw_B B Nucleoprotein
Length=130
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/98 (36%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPR KR T+ NV Q FG P N GD +L++ G D K +PQ+A+ P+ +A F
Sbjct 22 KKPRWKRVPTREENVIQCFG---PRDFNHNMGDSDLVQNGVDAKGFPQLAELIPNQAALF 78
Query 316 GMSRIGMEVTPSGTWLTYTGAIKL--DDKD-PNFKDQV 350
S + + +TYT + + D+K+ P F +Q+
Sbjct 79 FDSEVSTDEVGDNVQITYTYKMLVAKDNKNLPKFIEQI 116
>5epw_A A Nucleoprotein
Length=130
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/98 (36%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query 256 KKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFF 315
KKPR KR T+ NV Q FG P N GD +L++ G D K +PQ+A+ P+ +A F
Sbjct 22 KKPRWKRVPTREENVIQCFG---PRDFNHNMGDSDLVQNGVDAKGFPQLAELIPNQAALF 78
Query 316 GMSRIGMEVTPSGTWLTYTGAIKL--DDKD-PNFKDQV 350
S + + +TYT + + D+K+ P F +Q+
Sbjct 79 FDSEVSTDEVGDNVQITYTYKMLVAKDNKNLPKFIEQI 116
>5n4k_B B Nucleoprotein
Length=150
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/67 (45%), Positives = 38/67 (57%), Gaps = 2/67 (3%)
Query 72 VPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAGLPYGANKDGII 131
VPI + D+QIGY+ R R DL P+ +FYYLGTGP L + DG++
Sbjct 52 VPIGKGNK-DEQIGYWN-VQERWRMRRXXRVDLPPKVHFYYLGTGPHKDLKFRQRSDGVV 109
Query 132 WVATEGA 138
WVA EGA
Sbjct 110 WVAKEGA 116
>5n4k_A A Nucleoprotein
Length=150
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 2/67 (3%)
Query 72 VPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAGLPYGANKDGII 131
VPI + D+QIGY+ R ++ DL P+ +FYYLGTGP L + DG++
Sbjct 52 VPIGKGNK-DEQIGYWNVQERWRMRRXXRV-DLPPKVHFYYLGTGPHKDLKFRQRSDGVV 109
Query 132 WVATEGA 138
WVA EGA
Sbjct 110 WVAKEGA 116
>2ge7_A A Nucleocapsid protein
Length=108
Score = 46.2 bits (108), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/104 (29%), Positives = 47/104 (45%), Gaps = 1/104 (1%)
Query 261 KRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRI 320
KRT Y V Q FG R + +GNFGD ++ +G + PS+ A SR+
Sbjct 4 KRTIPPGYKVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRV 62
Query 321 GMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
++ P G L + + DP F + V + ++ +D T P
Sbjct 63 TPKLQPDGLHLKFEFTTVVPRDDPQFDNYVKICDQCVDGVGTRP 106
>2ge7_B B Nucleocapsid protein
Length=108
Score = 46.2 bits (108), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/104 (29%), Positives = 47/104 (45%), Gaps = 1/104 (1%)
Query 261 KRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRI 320
KRT Y V Q FG R + +GNFGD ++ +G + PS+ A SR+
Sbjct 4 KRTIPPGYKVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRV 62
Query 321 GMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
++ P G L + + DP F + V + ++ +D T P
Sbjct 63 TPKLQPDGLHLKFEFTTVVPRDDPQFDNYVKICDQCVDGVGTRP 106
>2ge8_A A Nucleocapsid protein
Length=114
Score = 46.6 bits (109), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/104 (29%), Positives = 47/104 (45%), Gaps = 1/104 (1%)
Query 261 KRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRI 320
KRT Y V Q FG R + +GNFGD ++ +G + PS+ A SR+
Sbjct 10 KRTIPPGYKVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRV 68
Query 321 GMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
++ P G L + + DP F + V + ++ +D T P
Sbjct 69 TPKLQPDGLHLKFEFTTVVPRDDPQFDNYVKICDQCVDGVGTRP 112
>2ge8_C F Nucleocapsid protein
Length=114
Score = 46.6 bits (109), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/104 (29%), Positives = 47/104 (45%), Gaps = 1/104 (1%)
Query 261 KRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRI 320
KRT Y V Q FG R + +GNFGD ++ +G + PS+ A SR+
Sbjct 10 KRTIPPGYKVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRV 68
Query 321 GMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
++ P G L + + DP F + V + ++ +D T P
Sbjct 69 TPKLQPDGLHLKFEFTTVVPRDDPQFDNYVKICDQCVDGVGTRP 112
>2ge8_D G Nucleocapsid protein
Length=114
Score = 46.6 bits (109), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/104 (29%), Positives = 47/104 (45%), Gaps = 1/104 (1%)
Query 261 KRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRI 320
KRT Y V Q FG R + +GNFGD ++ +G + PS+ A SR+
Sbjct 10 KRTIPPGYKVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRV 68
Query 321 GMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
++ P G L + + DP F + V + ++ +D T P
Sbjct 69 TPKLQPDGLHLKFEFTTVVPRDDPQFDNYVKICDQCVDGVGTRP 112
>2ge8_G I Nucleocapsid protein
Length=114
Score = 46.2 bits (108), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/104 (29%), Positives = 47/104 (45%), Gaps = 1/104 (1%)
Query 261 KRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRI 320
KRT Y V Q FG R + +GNFGD ++ +G + PS+ A SR+
Sbjct 10 KRTIPPGYKVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRV 68
Query 321 GMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
++ P G L + + DP F + V + ++ +D T P
Sbjct 69 TPKLQPDGLHLKFEFTTVVPRDDPQFDNYVKICDQCVDGVGTRP 112
>2ge8_H J Nucleocapsid protein
Length=114
Score = 46.2 bits (108), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/104 (29%), Positives = 47/104 (45%), Gaps = 1/104 (1%)
Query 261 KRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRI 320
KRT Y V Q FG R + +GNFGD ++ +G + PS+ A SR+
Sbjct 10 KRTIPPGYKVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRV 68
Query 321 GMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
++ P G L + + DP F + V + ++ +D T P
Sbjct 69 TPKLQPDGLHLKFEFTTVVPRDDPQFDNYVKICDQCVDGVGTRP 112
>2ge8_F D Nucleocapsid protein
Length=114
Score = 46.2 bits (108), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/104 (29%), Positives = 47/104 (45%), Gaps = 1/104 (1%)
Query 261 KRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRI 320
KRT Y V Q FG R + +GNFGD ++ +G + PS+ A SR+
Sbjct 10 KRTIPPGYKVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRV 68
Query 321 GMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
++ P G L + + DP F + V + ++ +D T P
Sbjct 69 TPKLQPDGLHLKFEFTTVVPRDDPQFDNYVKICDQCVDGVGTRP 112
>2ge8_B B Nucleocapsid protein
Length=114
Score = 46.2 bits (108), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/104 (29%), Positives = 47/104 (45%), Gaps = 1/104 (1%)
Query 261 KRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRI 320
KRT Y V Q FG R + +GNFGD ++ +G + PS+ A SR+
Sbjct 10 KRTIPPGYKVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRV 68
Query 321 GMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
++ P G L + + DP F + V + ++ +D T P
Sbjct 69 TPKLQPDGLHLKFEFTTVVPRDDPQFDNYVKICDQCVDGVGTRP 112
>2ge8_E C Nucleocapsid protein
Length=114
Score = 46.2 bits (108), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/104 (29%), Positives = 47/104 (45%), Gaps = 1/104 (1%)
Query 261 KRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRI 320
KRT Y V Q FG R + +GNFGD ++ +G + PS+ A SR+
Sbjct 10 KRTIPPGYKVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRV 68
Query 321 GMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFP 364
++ P G L + + DP F + V + ++ +D T P
Sbjct 69 TPKLQPDGLHLKFEFTTVVPRDDPQFDNYVKICDQCVDGVGTRP 112
>2ca1_A A NUCLEOCAPSID PROTEIN
Length=111
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 29/109 (27%), Positives = 48/109 (44%), Gaps = 1/109 (1%)
Query 251 AAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPS 310
A E + + KRT Y V Q FG R + +GNFGD ++ +G + PS
Sbjct 4 ADEMAHRRYCKRTIPPNYRVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPS 62
Query 311 ASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDA 359
+ A SR+ ++ G L + + DP F + V + ++ +D
Sbjct 63 SHACLFGSRVTPKLQLDGLHLRFEFTTVVPCDDPQFDNYVKICDQCVDG 111
>2ca1_B B NUCLEOCAPSID PROTEIN
Length=111
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Query 261 KRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRI 320
KRT Y V Q FG R + +GNFGD ++ +G + PS+ A SR+
Sbjct 14 KRTIPPNYRVDQVFGPR-TKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRV 72
Query 321 GMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDA 359
++ G L + + DP F + V + ++ +D
Sbjct 73 TPKLQLDGLHLRFEFTTVVPCDDPQFDNYVKICDQCVDG 111
>8th1_H H Nucleoprotein
Length=25
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 14/14 (100%), Positives = 14/14 (100%), Gaps = 0/14 (0%)
Query 12 APRITFGGPSDSTG 25
APRITFGGPSDSTG
Sbjct 12 APRITFGGPSDSTG 25
>7v0m_A A Ankyrin-1
Length=1881
Score = 35.0 bits (79), Expect = 2.1, Method: Composition-based stats.
Identities = 32/108 (30%), Positives = 48/108 (44%), Gaps = 6/108 (6%)
Query 130 IIWVATEGALNTPKDHIGTRNP-ANNAAIVLQL-PQGTTLPKGFYAEGSRGGSQASSRSS 187
+I T+G + P HI RN AA++LQ P L K + + +
Sbjct 163 LINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVA 222
Query 188 SR--SRNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESK 233
+R +S N TP G +P +A G+ + LLLDR Q+E+K
Sbjct 223 QLLLNRGASVNFTP--QNGITPLHIASRRGNVIMVRLLLDRGAQIETK 268
>7v0k_D H Ankyrin-1
Length=1881
Score = 35.0 bits (79), Expect = 2.1, Method: Composition-based stats.
Identities = 32/108 (30%), Positives = 48/108 (44%), Gaps = 6/108 (6%)
Query 130 IIWVATEGALNTPKDHIGTRNP-ANNAAIVLQL-PQGTTLPKGFYAEGSRGGSQASSRSS 187
+I T+G + P HI RN AA++LQ P L K + + +
Sbjct 163 LINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVA 222
Query 188 SR--SRNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESK 233
+R +S N TP G +P +A G+ + LLLDR Q+E+K
Sbjct 223 QLLLNRGASVNFTP--QNGITPLHIASRRGNVIMVRLLLDRGAQIETK 268
>8csv_A A Ankyrin-1
Length=1881
Score = 35.0 bits (79), Expect = 2.1, Method: Composition-based stats.
Identities = 32/108 (30%), Positives = 48/108 (44%), Gaps = 6/108 (6%)
Query 130 IIWVATEGALNTPKDHIGTRNP-ANNAAIVLQL-PQGTTLPKGFYAEGSRGGSQASSRSS 187
+I T+G + P HI RN AA++LQ P L K + + +
Sbjct 163 LINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVA 222
Query 188 SR--SRNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESK 233
+R +S N TP G +P +A G+ + LLLDR Q+E+K
Sbjct 223 QLLLNRGASVNFTP--QNGITPLHIASRRGNVIMVRLLLDRGAQIETK 268
>7uzu_A A Ankyrin-1
Length=1881
Score = 35.0 bits (79), Expect = 2.1, Method: Composition-based stats.
Identities = 32/108 (30%), Positives = 48/108 (44%), Gaps = 6/108 (6%)
Query 130 IIWVATEGALNTPKDHIGTRNP-ANNAAIVLQL-PQGTTLPKGFYAEGSRGGSQASSRSS 187
+I T+G + P HI RN AA++LQ P L K + + +
Sbjct 163 LINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVA 222
Query 188 SR--SRNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESK 233
+R +S N TP G +P +A G+ + LLLDR Q+E+K
Sbjct 223 QLLLNRGASVNFTP--QNGITPLHIASRRGNVIMVRLLLDRGAQIETK 268
>8cte_A A Ankyrin-1
Length=1881
Score = 35.0 bits (79), Expect = 2.1, Method: Composition-based stats.
Identities = 32/108 (30%), Positives = 48/108 (44%), Gaps = 6/108 (6%)
Query 130 IIWVATEGALNTPKDHIGTRNP-ANNAAIVLQL-PQGTTLPKGFYAEGSRGGSQASSRSS 187
+I T+G + P HI RN AA++LQ P L K + + +
Sbjct 163 LINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVA 222
Query 188 SR--SRNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESK 233
+R +S N TP G +P +A G+ + LLLDR Q+E+K
Sbjct 223 QLLLNRGASVNFTP--QNGITPLHIASRRGNVIMVRLLLDRGAQIETK 268
>8csl_A A Ankyrin-1
Length=1881
Score = 34.3 bits (77), Expect = 3.0, Method: Composition-based stats.
Identities = 32/108 (30%), Positives = 48/108 (44%), Gaps = 6/108 (6%)
Query 130 IIWVATEGALNTPKDHIGTRNP-ANNAAIVLQL-PQGTTLPKGFYAEGSRGGSQASSRSS 187
+I T+G + P HI RN AA++LQ P L K + + +
Sbjct 163 LINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVA 222
Query 188 SR--SRNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESK 233
+R +S N TP G +P +A G+ + LLLDR Q+E+K
Sbjct 223 QLLLNRGASVNFTP--QNGITPLHIASRRGNVIMVRLLLDRGAQIETK 268
>8cs9_A A Ankyrin-1
Length=1881
Score = 34.3 bits (77), Expect = 3.0, Method: Composition-based stats.
Identities = 32/108 (30%), Positives = 48/108 (44%), Gaps = 6/108 (6%)
Query 130 IIWVATEGALNTPKDHIGTRNP-ANNAAIVLQL-PQGTTLPKGFYAEGSRGGSQASSRSS 187
+I T+G + P HI RN AA++LQ P L K + + +
Sbjct 163 LINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVA 222
Query 188 SR--SRNSSRNSTPGSSRGTSPARMAGNGGDAALALLLLDRLNQLESK 233
+R +S N TP G +P +A G+ + LLLDR Q+E+K
Sbjct 223 QLLLNRGASVNFTP--QNGITPLHIASRRGNVIMVRLLLDRGAQIETK 268
>2v8j_A A PECTATE LYASE
Length=535
Score = 32.7 bits (73), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/56 (36%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query 237 KGQQQQGQTVTKKSAAEASKKPRQKRTATKAYNVTQAFGRRGP---EQTQGNFGDQ 289
K QQ QG K A+ PR +T Y TQA R P T FGD+
Sbjct 213 KHQQDQGALTWAKRLADQYVLPRDAKTGLGVYQFTQALKREEPTDDADTHSKFGDR 268
Lambda K H a alpha
0.310 0.128 0.371 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 41012104278
Database: unitmol_20240403.fasta
Posted date: Apr 4, 2024 8:53 PM
Number of letters in database: 237,935,689
Number of sequences in database: 829,018
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40