[Multiple Alignment(many alignments)]
[Alignment Bar(many alignments)]
[show plain BLAST file]
BLASTP 2.11.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: unitmol_20240501.fasta
835,512 sequences; 240,313,072 total letters
Query= sp|Q13568|IRF5_HUMAN Interferon regulatory factor 5 OS=Homo sapiens
OX=9606 GN=IRF5 PE=1 SV=2
Length=498
Score E
Sequences producing significant alignments: (Bits) Value
3dsh_A A Interferon regulatory factor 5 481 7e-170
7rh2_A A ICSAT transcription factor 109 3e-27
7rh2_H H ICSAT transcription factor 108 3e-27
7rh2_B B ICSAT transcription factor 108 3e-27
7rh2_G G ICSAT transcription factor 108 3e-27
8jko_C C Interferon regulatory factor 4 108 5e-27
2dll_A A Interferon regulatory factor 4 108 6e-27
5bvi_B B Interferon regulatory factor 4 110 6e-27
7jm4_C B Interferon regulatory factor 4 107 7e-27
8jkl_G D Interferon regulatory factor 4 108 7e-27
5bvi_A A Interferon regulatory factor 4 110 7e-27
7jm4_D A Interferon regulatory factor 4 107 9e-27
7jm4_G G Interferon regulatory factor 4 107 9e-27
7oot_B B Interferon regulatory factor 4 108 9e-27
7oot_A A Interferon regulatory factor 4 108 9e-27
8jkl_H H Interferon regulatory factor 4 107 9e-27
8jkq_D G Interferon regulatory factor 4 107 9e-27
7jm4_H H Interferon regulatory factor 4 107 1e-26
8jkn_D D Interferon regulatory factor 4 107 1e-26
8jkl_F C Interferon regulatory factor 4 107 1e-26
7o56_A A Interferon regulatory factor 4 108 1e-26
8jkl_E G Interferon regulatory factor 4 107 1e-26
1irg_A A INTERFERON REGULATORY FACTOR-2 107 1e-26
1irf_A A INTERFERON REGULATORY FACTOR-2 107 1e-26
7ogs_F F Interferon regulatory factor 4 108 1e-26
7ogs_E E Interferon regulatory factor 4 108 1e-26
7ogs_B B Interferon regulatory factor 4 108 1e-26
7ogs_A A Interferon regulatory factor 4 108 1e-26
8jks_H H Interferon regulatory factor 4 107 1e-26
8jkn_H H Interferon regulatory factor 4 107 1e-26
8jks_D D Interferon regulatory factor 4 107 1e-26
8jkq_H H Interferon regulatory factor 4 107 1e-26
8jks_G G Interferon regulatory factor 4 107 2e-26
8jko_D D Interferon regulatory factor 4 107 2e-26
8jkn_C C Interferon regulatory factor 4 107 2e-26
8jkn_G G Interferon regulatory factor 4 107 2e-26
8jks_C C Interferon regulatory factor 4 107 2e-26
8jko_G G Interferon regulatory factor 4 107 2e-26
7o56_D B Interferon regulatory factor 4 107 2e-26
7o56_E C Interferon regulatory factor 4 107 3e-26
8jko_H H Interferon regulatory factor 4 105 5e-26
8jkq_C D Interferon regulatory factor 4 104 2e-25
1if1_C A PROTEIN (INTERFERON REGULATORY FACTOR 1) 103 2e-25
2irf_I I INTERFERON REGULATORY FACTOR 2 102 1e-24
2irf_G G INTERFERON REGULATORY FACTOR 2 102 1e-24
2irf_L L INTERFERON REGULATORY FACTOR 2 102 1e-24
2irf_K K INTERFERON REGULATORY FACTOR 2 102 1e-24
2irf_H H INTERFERON REGULATORY FACTOR 2 102 1e-24
2irf_J J INTERFERON REGULATORY FACTOR 2 102 1e-24
1if1_D B PROTEIN (INTERFERON REGULATORY FACTOR 1) 101 1e-24
6td4_A A Interferon regulatory factor 4 100 6e-24
8jkq_G F Interferon regulatory factor 4 96.3 1e-22
2pi0_D B Interferon regulatory factor 3 92.0 5e-21
1t2k_C A Interferon regulatory factor 3 91.7 5e-21
1t2k_D B Interferon regulatory factor 3 91.3 6e-21
2o6g_C E Interferon regulatory factor 3 91.7 7e-21
2o6g_E G Interferon regulatory factor 3 91.7 7e-21
2o6g_F H Interferon regulatory factor 3 91.3 9e-21
2o6g_D F Interferon regulatory factor 3 91.3 9e-21
2pi0_E C Interferon regulatory factor 3 90.9 1e-20
7jfm_C B Interferon regulatory factor 3 90.1 2e-19
2pi0_F D Interferon regulatory factor 3 85.9 6e-19
2pi0_C A Interferon regulatory factor 3 84.3 2e-18
1qwt_B B Interferon regulatory factor 3 88.6 2e-18
1qwt_A A Interferon regulatory factor 3 88.6 2e-18
5jej_E B Interferon regulatory factor 3 87.8 2e-18
5jeo_B A Interferon regulatory factor 3 87.8 3e-18
5jek_A A Interferon regulatory factor 3 87.8 3e-18
5jej_D A Interferon regulatory factor 3 87.8 3e-18
5jer_E A Interferon regulatory factor 3 87.8 3e-18
5jer_G E Interferon regulatory factor 3 87.8 3e-18
5jer_F C Interferon regulatory factor 3 87.8 3e-18
5jer_H G Interferon regulatory factor 3 87.8 3e-18
5jel_A A Interferon regulatory factor 3 87.8 3e-18
5jek_B B Interferon regulatory factor 3 87.8 3e-18
7jfm_A A Interferon regulatory factor 3 87.0 3e-18
3qu6_A A IRF3 protein 84.0 3e-18
3qu6_B B IRF3 protein 84.0 3e-18
1j2f_B B Interferon regulatory factor 3 88.2 3e-18
3a77_B B Interferon regulatory factor 3 87.4 4e-18
5jem_C B Interferon regulatory factor 3 85.9 8e-18
5jem_E E Interferon regulatory factor 3 85.9 8e-18
5jem_A A Interferon regulatory factor 3 85.9 8e-18
3a77_C C Interferon regulatory factor 3 86.7 9e-18
5jem_G G Interferon regulatory factor 3 85.5 9e-18
1zoq_A A Interferon regulatory factor 3 84.7 1e-17
1zoq_C B Interferon regulatory factor 3 84.7 1e-17
3a77_A A Interferon regulatory factor 3 85.9 1e-17
2o61_C A Transcription factor p65/Interferon regulatory factor 7/... 89.4 1e-17
3a77_D D Interferon regulatory factor 3 85.5 2e-17
1j2f_A A Interferon regulatory factor 3 85.1 3e-17
7jfl_A A Interferon regulatory factor 3 84.0 3e-17
3qu6_C C IRF3 protein 80.5 6e-17
7jfl_C B Interferon regulatory factor 3 82.0 2e-16
3qu3_A A Interferon regulatory factor 7 75.5 5e-15
3qu3_C C Interferon regulatory factor 7 75.1 7e-15
3qu3_B B Interferon regulatory factor 7 75.1 7e-15
5oem_A A Interferon regulatory factor 9 57.0 3e-08
5oen_A A Interferon regulatory factor 9 47.0 8e-05
4hly_B B K9 37.4 0.081
4hly_A A K9 37.4 0.081
4hlx_B B K9 37.4 0.084
4hlx_A A K9 37.4 0.090
4hlx_D D K9 37.4 0.090
4hlx_C C K9 37.4 0.090
6rxz_BA CK Putative U3 small nucleolar ribonucleoprotein 32.7 9.6
6rxy_BA CK Imp4 32.7 9.6
6rxx_M CK Putative U3 small nucleolar ribonucleoprotein 32.7 9.6
6rxv_BA CK Imp4 32.7 9.6
6rxu_BA CK Putative U3 small nucleolar ribonucleoprotein 32.7 9.6
6rxt_BA CK Putative U3 small nucleolar ribonucleoprotein 32.7 9.6
>3dsh_A A Interferon regulatory factor 5
Length=246
Score = 481 bits (1239), Expect = 7e-170, Method: Compositional matrix adjust.
Identities = 235/236 (99%), Positives = 235/236 (99%), Gaps = 0/236 (0%)
Query 232 EQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGP 291
EQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGP
Sbjct 1 EQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGP 60
Query 292 ISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCA 351
ISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCA
Sbjct 61 ISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCA 120
Query 352 SAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREK 411
SAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREK
Sbjct 121 SAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREK 180
Query 412 KLITVQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQS 467
KLITVQVVPVAARLLLEMFSGELSWSAD IRLQISNPDLKDRMVEQFKELHHIWQS
Sbjct 181 KLITVQVVPVAARLLLEMFSGELSWSADDIRLQISNPDLKDRMVEQFKELHHIWQS 236
>7rh2_A A ICSAT transcription factor
Length=111
Score = 109 bits (272), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA R +++ D +FKAWA GK+
Sbjct 5 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGRQDYNREEDAALFKAWALFKGKFR 64
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 65 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 110
>7rh2_H H ICSAT transcription factor
Length=111
Score = 108 bits (271), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA R +++ D +FKAWA GK+
Sbjct 5 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGRQDYNREEDAALFKAWALFKGKFR 64
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 65 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 110
>7rh2_B B ICSAT transcription factor
Length=111
Score = 108 bits (271), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA R +++ D +FKAWA GK+
Sbjct 5 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGRQDYNREEDAALFKAWALFKGKFR 64
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 65 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 110
>7rh2_G G ICSAT transcription factor
Length=111
Score = 108 bits (271), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA R +++ D +FKAWA GK+
Sbjct 5 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGRQDYNREEDAALFKAWALFKGKFR 64
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 65 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 110
>8jko_C C Interferon regulatory factor 4
Length=116
Score = 108 bits (270), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 68/106 (64%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 4 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 63
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + PYK+Y +
Sbjct 64 EGIDKPDPPTWKRRLRCALNKSNDFEELVERSXXXXSDPYKVYRIV 109
>2dll_A A Interferon regulatory factor 4
Length=121
Score = 108 bits (270), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 50/112 (45%), Positives = 73/112 (65%), Gaps = 1/112 (1%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 8 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 67
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC-SNGPA 126
EG+D+ DP WK LRCALNKS DF + + + PYK+Y + +GP+
Sbjct 68 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIVPESGPS 119
>5bvi_B B Interferon regulatory factor 4
Length=185
Score = 110 bits (275), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 103/188 (55%), Gaps = 17/188 (9%)
Query 241 SPHMLPLTD--LEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVR 298
S L L+D L I YR + LT ++P GCR+ + + +L+QV
Sbjct 6 SAEALALSDCRLHICLYYRDILVKELTTTSPEGCRISHGHT---------YDVSNLDQVL 56
Query 299 FPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCP 358
FP P+D + QR +LL L+RGL+L + LYA RLCQ +++W GP A D P
Sbjct 57 FPYPDD---NGQRKNIEKLLSHLERGLVLWMAPDGLYAKRLCQSRIYWDGPLALCSDR-P 112
Query 359 NPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQV 418
N ++R+ KLF + FL+EL +F P F++ CFGEE+PD + R++KLIT V
Sbjct 113 NKLERDQTCKLFDTQQFLSELQVFAH-HGRPAPRFQVTLCFGEEFPDPQ-RQRKLITAHV 170
Query 419 VPVAARLL 426
P+ AR L
Sbjct 171 EPLLARQL 178
>7jm4_C B Interferon regulatory factor 4
Length=111
Score = 107 bits (268), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 5 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 64
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 65 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 110
>8jkl_G D Interferon regulatory factor 4
Length=116
Score = 108 bits (269), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 4 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 63
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 64 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 109
>5bvi_A A Interferon regulatory factor 4
Length=185
Score = 110 bits (275), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 103/188 (55%), Gaps = 17/188 (9%)
Query 241 SPHMLPLTD--LEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVR 298
S L L+D L I YR + LT ++P GCR+ + + +L+QV
Sbjct 6 SAEALALSDCRLHICLYYRDILVKELTTTSPEGCRISHGHT---------YDVSNLDQVL 56
Query 299 FPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCP 358
FP P+D + QR +LL L+RGL+L + LYA RLCQ +++W GP A D P
Sbjct 57 FPYPDD---NGQRKNIEKLLSHLERGLVLWMAPDGLYAKRLCQSRIYWDGPLALCSDR-P 112
Query 359 NPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQV 418
N ++R+ KLF + FL+EL +F P F++ CFGEE+PD + R++KLIT V
Sbjct 113 NKLERDQTCKLFDTQQFLSELQVFAH-HGRPAPRFQVTLCFGEEFPDPQ-RQRKLITAHV 170
Query 419 VPVAARLL 426
P+ AR L
Sbjct 171 EPLLARQL 178
>7jm4_D A Interferon regulatory factor 4
Length=111
Score = 107 bits (268), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 5 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 64
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 65 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 110
>7jm4_G G Interferon regulatory factor 4
Length=111
Score = 107 bits (268), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 5 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 64
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 65 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 110
>7oot_B B Interferon regulatory factor 4
Length=141
Score = 108 bits (270), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 49/109 (45%), Positives = 70/109 (64%), Gaps = 0/109 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 25 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 84
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNG 124
EG+D+ DP WK LRCALNKS DF + + + PYK+Y + G
Sbjct 85 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIVPEG 133
>7oot_A A Interferon regulatory factor 4
Length=141
Score = 108 bits (270), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 49/109 (45%), Positives = 70/109 (64%), Gaps = 0/109 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 25 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 84
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNG 124
EG+D+ DP WK LRCALNKS DF + + + PYK+Y + G
Sbjct 85 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIVPEG 133
>8jkl_H H Interferon regulatory factor 4
Length=116
Score = 107 bits (268), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 4 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 63
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 64 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 109
>8jkq_D G Interferon regulatory factor 4
Length=116
Score = 107 bits (268), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 4 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAXKQDYNREEDAALFKAWALFKGKFR 63
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 64 EGIDKPDPPTWKRRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 109
>7jm4_H H Interferon regulatory factor 4
Length=111
Score = 107 bits (267), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 5 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 64
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 65 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 110
>8jkn_D D Interferon regulatory factor 4
Length=116
Score = 107 bits (268), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 4 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQXXNREEDAALFKAWALFKGKFR 63
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 64 EGIDKPDPPTWKRRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 109
>8jkl_F C Interferon regulatory factor 4
Length=116
Score = 107 bits (268), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 4 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 63
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 64 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 109
>7o56_A A Interferon regulatory factor 4
Length=141
Score = 108 bits (270), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 49/109 (45%), Positives = 70/109 (64%), Gaps = 0/109 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 25 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 84
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNG 124
EG+D+ DP WK LRCALNKS DF + + + PYK+Y + G
Sbjct 85 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIVPEG 133
>8jkl_E G Interferon regulatory factor 4
Length=116
Score = 107 bits (267), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 67/106 (63%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 4 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 63
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + PYK+Y +
Sbjct 64 EGIDKPDPPTWKTRLRCALNKSNDFEELVXXXXXXISDPYKVYRIV 109
>1irg_A A INTERFERON REGULATORY FACTOR-2
Length=112
Score = 107 bits (267), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 48/110 (44%), Positives = 67/110 (61%), Gaps = 0/110 (0%)
Query 11 PPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKE 70
P R+R++PWL Q+NS PGL+W+N EKK+F IPW HA RHG + D +F+ WA
Sbjct 1 PVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIH 60
Query 71 TGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
TGK+ G+D+ DP WKAN RCA+N D + D +++Y +
Sbjct 61 TGKHQPGIDKPDPKTWKANFRCAMNSLPDIEEVKDRSIKKGNNAFRVYRM 110
>1irf_A A INTERFERON REGULATORY FACTOR-2
Length=112
Score = 107 bits (267), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 48/110 (44%), Positives = 67/110 (61%), Gaps = 0/110 (0%)
Query 11 PPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKE 70
P R+R++PWL Q+NS PGL+W+N EKK+F IPW HA RHG + D +F+ WA
Sbjct 1 PVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIH 60
Query 71 TGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
TGK+ G+D+ DP WKAN RCA+N D + D +++Y +
Sbjct 61 TGKHQPGIDKPDPKTWKANFRCAMNSLPDIEEVKDRSIKKGNNAFRVYRM 110
>7ogs_F F Interferon regulatory factor 4
Length=141
Score = 108 bits (269), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 49/109 (45%), Positives = 70/109 (64%), Gaps = 0/109 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 25 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 84
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNG 124
EG+D+ DP WK LRCALNKS DF + + + PYK+Y + G
Sbjct 85 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIVPEG 133
>7ogs_E E Interferon regulatory factor 4
Length=141
Score = 108 bits (269), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 49/109 (45%), Positives = 70/109 (64%), Gaps = 0/109 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 25 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 84
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNG 124
EG+D+ DP WK LRCALNKS DF + + + PYK+Y + G
Sbjct 85 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIVPEG 133
>7ogs_B B Interferon regulatory factor 4
Length=141
Score = 108 bits (269), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 49/109 (45%), Positives = 70/109 (64%), Gaps = 0/109 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 25 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 84
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNG 124
EG+D+ DP WK LRCALNKS DF + + + PYK+Y + G
Sbjct 85 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIVPEG 133
>7ogs_A A Interferon regulatory factor 4
Length=141
Score = 108 bits (269), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 49/109 (45%), Positives = 70/109 (64%), Gaps = 0/109 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 25 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 84
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNG 124
EG+D+ DP WK LRCALNKS DF + + + PYK+Y + G
Sbjct 85 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIVPEG 133
>8jks_H H Interferon regulatory factor 4
Length=116
Score = 107 bits (267), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 4 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 63
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 64 EGIDKPDPPTWKRRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 109
>8jkn_H H Interferon regulatory factor 4
Length=116
Score = 107 bits (267), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 4 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 63
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 64 EGIDKPDPPTWKRRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 109
>8jks_D D Interferon regulatory factor 4
Length=116
Score = 107 bits (267), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 4 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 63
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 64 EGIDKPDPPTWKRRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 109
>8jkq_H H Interferon regulatory factor 4
Length=116
Score = 107 bits (267), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 4 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 63
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 64 EGIDKPDPPTWKRRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 109
>8jks_G G Interferon regulatory factor 4
Length=116
Score = 107 bits (266), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 4 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 63
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 64 EGIDKPDPPTWKRRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 109
>8jko_D D Interferon regulatory factor 4
Length=116
Score = 107 bits (266), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 4 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQXYNREEDAALFKAWALFKGKFR 63
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 64 EGIDKPDPPTWKRRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 109
>8jkn_C C Interferon regulatory factor 4
Length=116
Score = 107 bits (266), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 4 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 63
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 64 EGIDKPDPPTWKRRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 109
>8jkn_G G Interferon regulatory factor 4
Length=116
Score = 107 bits (266), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 4 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 63
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 64 EGIDKPDPPTWKRRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 109
>8jks_C C Interferon regulatory factor 4
Length=116
Score = 107 bits (266), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 4 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 63
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 64 EGIDKPDPPTWKRRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 109
>8jko_G G Interferon regulatory factor 4
Length=116
Score = 107 bits (266), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 4 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 63
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 64 EGIDKPDPPTWKRRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 109
>7o56_D B Interferon regulatory factor 4
Length=141
Score = 107 bits (268), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 25 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 84
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 85 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 130
>7o56_E C Interferon regulatory factor 4
Length=141
Score = 107 bits (267), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 25 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 84
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 85 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 130
>8jko_H H Interferon regulatory factor 4
Length=116
Score = 105 bits (262), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + D +FKAWA GK+
Sbjct 4 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDXXXXXDAALFKAWALFKGKFR 63
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 64 EGIDKPDPPTWKRRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 109
>8jkq_C D Interferon regulatory factor 4
Length=116
Score = 104 bits (259), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 68/106 (64%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YP L W N EK +F IPW+HA + +++ D +FKAWA GK+
Sbjct 4 KLRQWLIDQIDSGKYPXLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 63
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
EG+D+ DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 64 EGIDKPDPPTWKRRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 109
>1if1_C A PROTEIN (INTERFERON REGULATORY FACTOR 1)
Length=113
Score = 103 bits (258), Expect = 2e-25, Method: Composition-based stats.
Identities = 45/105 (43%), Positives = 64/105 (61%), Gaps = 0/105 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
R++PWL Q+NS Q PGL W+N E+ +F IPW+HA +HG + D +F++WA TG+Y
Sbjct 7 RMRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAIHTGRYK 66
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
G E DP WKAN RCA+N D + D R+ ++Y +
Sbjct 67 AGEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRM 111
>2irf_I I INTERFERON REGULATORY FACTOR 2
Length=113
Score = 102 bits (253), Expect = 1e-24, Method: Composition-based stats.
Identities = 47/107 (44%), Positives = 66/107 (62%), Gaps = 0/107 (0%)
Query 14 RVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGK 73
R+R++PWL Q+NS PGL+W+N EKK+F IPW HA RHG + D +F+ WA TGK
Sbjct 5 RMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIHTGK 64
Query 74 YTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
+ G+D+ DP WKAN RCA+N D + D +++Y +
Sbjct 65 HQPGIDKPDPKTWKANFRCAMNSLPDIEEVKDRSIKKGNNAFRVYRM 111
>2irf_G G INTERFERON REGULATORY FACTOR 2
Length=113
Score = 102 bits (253), Expect = 1e-24, Method: Composition-based stats.
Identities = 47/107 (44%), Positives = 66/107 (62%), Gaps = 0/107 (0%)
Query 14 RVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGK 73
R+R++PWL Q+NS PGL+W+N EKK+F IPW HA RHG + D +F+ WA TGK
Sbjct 5 RMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIHTGK 64
Query 74 YTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
+ G+D+ DP WKAN RCA+N D + D +++Y +
Sbjct 65 HQPGIDKPDPKTWKANFRCAMNSLPDIEEVKDRSIKKGNNAFRVYRM 111
>2irf_L L INTERFERON REGULATORY FACTOR 2
Length=113
Score = 102 bits (253), Expect = 1e-24, Method: Composition-based stats.
Identities = 47/107 (44%), Positives = 66/107 (62%), Gaps = 0/107 (0%)
Query 14 RVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGK 73
R+R++PWL Q+NS PGL+W+N EKK+F IPW HA RHG + D +F+ WA TGK
Sbjct 5 RMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIHTGK 64
Query 74 YTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
+ G+D+ DP WKAN RCA+N D + D +++Y +
Sbjct 65 HQPGIDKPDPKTWKANFRCAMNSLPDIEEVKDRSIKKGNNAFRVYRM 111
>2irf_K K INTERFERON REGULATORY FACTOR 2
Length=113
Score = 102 bits (253), Expect = 1e-24, Method: Composition-based stats.
Identities = 47/107 (44%), Positives = 66/107 (62%), Gaps = 0/107 (0%)
Query 14 RVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGK 73
R+R++PWL Q+NS PGL+W+N EKK+F IPW HA RHG + D +F+ WA TGK
Sbjct 5 RMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIHTGK 64
Query 74 YTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
+ G+D+ DP WKAN RCA+N D + D +++Y +
Sbjct 65 HQPGIDKPDPKTWKANFRCAMNSLPDIEEVKDRSIKKGNNAFRVYRM 111
>2irf_H H INTERFERON REGULATORY FACTOR 2
Length=113
Score = 102 bits (253), Expect = 1e-24, Method: Composition-based stats.
Identities = 47/107 (44%), Positives = 66/107 (62%), Gaps = 0/107 (0%)
Query 14 RVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGK 73
R+R++PWL Q+NS PGL+W+N EKK+F IPW HA RHG + D +F+ WA TGK
Sbjct 5 RMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIHTGK 64
Query 74 YTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
+ G+D+ DP WKAN RCA+N D + D +++Y +
Sbjct 65 HQPGIDKPDPKTWKANFRCAMNSLPDIEEVKDRSIKKGNNAFRVYRM 111
>2irf_J J INTERFERON REGULATORY FACTOR 2
Length=113
Score = 102 bits (253), Expect = 1e-24, Method: Composition-based stats.
Identities = 47/107 (44%), Positives = 66/107 (62%), Gaps = 0/107 (0%)
Query 14 RVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGK 73
R+R++PWL Q+NS PGL+W+N EKK+F IPW HA RHG + D +F+ WA TGK
Sbjct 5 RMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIHTGK 64
Query 74 YTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
+ G+D+ DP WKAN RCA+N D + D +++Y +
Sbjct 65 HQPGIDKPDPKTWKANFRCAMNSLPDIEEVKDRSIKKGNNAFRVYRM 111
>1if1_D B PROTEIN (INTERFERON REGULATORY FACTOR 1)
Length=113
Score = 101 bits (252), Expect = 1e-24, Method: Composition-based stats.
Identities = 44/104 (42%), Positives = 63/104 (61%), Gaps = 0/104 (0%)
Query 17 LKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYTE 76
++PWL Q+NS Q PGL W+N E+ +F IPW+HA +HG + D +F++WA TG+Y
Sbjct 8 MRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAIHTGRYKA 67
Query 77 GVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
G E DP WKAN RCA+N D + D R+ ++Y +
Sbjct 68 GEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRM 111
>6td4_A A Interferon regulatory factor 4
Length=121
Score = 100 bits (248), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 64/109 (59%), Gaps = 0/109 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N +F IPW+HA + D +FKAWA GK+
Sbjct 10 KLRQWLIDQIDSGKYPGLVWENAAASIFRIPWKHAGXXXXXXEEDAALFKAWALFKGKFR 69
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNG 124
EG+D+ DP WK LR ALNKS DF + + + PYK+Y + G
Sbjct 70 EGIDKPDPPTWKTRLRSALNKSNDFEELVERSQLDISDPYKVYRIVPEG 118
>8jkq_G F Interferon regulatory factor 4
Length=116
Score = 96.3 bits (238), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 0/106 (0%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
+L+ WL+ Q++S +YPGL W N EK +F IPW+HA + +++ D +FKAWA GK
Sbjct 4 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKXX 63
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
DP WK LRCALNKS DF + + + PYK+Y +
Sbjct 64 XXXXXXDPPTWKXRLRCALNKSNDFEELVERSQLDISDPYKVYRIV 109
>2pi0_D B Interferon regulatory factor 3
Length=116
Score = 92.0 bits (227), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/108 (44%), Positives = 63/108 (58%), Gaps = 2/108 (2%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
R+ PWLV+Q++ Q G+ WVN + F IPW+H R Q+ D IF+AWA+ TG Y
Sbjct 10 RILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQE-DFGIFQAWAEATGAYV 68
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSN 123
G D+ D WK N R ALN+ RL D +D P P+KIYE ++
Sbjct 69 PGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKD-PHDPHKIYEFVNS 115
>1t2k_C A Interferon regulatory factor 3
Length=112
Score = 91.7 bits (226), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/108 (44%), Positives = 63/108 (58%), Gaps = 2/108 (2%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
R+ PWLV+Q++ Q G+ WVN + F IPW+H R Q+ D IF+AWA+ TG Y
Sbjct 7 RILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQE-DFGIFQAWAEATGAYV 65
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSN 123
G D+ D WK N R ALN+ RL D +D P P+KIYE ++
Sbjct 66 PGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKD-PHDPHKIYEFVNS 112
>1t2k_D B Interferon regulatory factor 3
Length=112
Score = 91.3 bits (225), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/107 (44%), Positives = 62/107 (58%), Gaps = 2/107 (2%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
R+ PWLV+Q++ Q G+ WVN + F IPW+H R Q+ D IF+AWA+ TG Y
Sbjct 7 RILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQE-DFGIFQAWAEATGAYV 65
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCS 122
G D+ D WK N R ALN+ RL D +D P P+KIYE +
Sbjct 66 PGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKD-PHDPHKIYEFVN 111
>2o6g_C E Interferon regulatory factor 3
Length=123
Score = 91.7 bits (226), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/108 (44%), Positives = 63/108 (58%), Gaps = 2/108 (2%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
R+ PWLV+Q++ Q G+ WVN + F IPW+H R Q+ D IF+AWA+ TG Y
Sbjct 7 RILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQE-DFGIFQAWAEATGAYV 65
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSN 123
G D+ D WK N R ALN+ RL D +D P P+KIYE ++
Sbjct 66 PGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKD-PHDPHKIYEFVNS 112
>2o6g_E G Interferon regulatory factor 3
Length=123
Score = 91.7 bits (226), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/108 (44%), Positives = 63/108 (58%), Gaps = 2/108 (2%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
R+ PWLV+Q++ Q G+ WVN + F IPW+H R Q+ D IF+AWA+ TG Y
Sbjct 7 RILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQE-DFGIFQAWAEATGAYV 65
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSN 123
G D+ D WK N R ALN+ RL D +D P P+KIYE ++
Sbjct 66 PGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKD-PHDPHKIYEFVNS 112
>2o6g_F H Interferon regulatory factor 3
Length=123
Score = 91.3 bits (225), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 47/107 (44%), Positives = 62/107 (58%), Gaps = 2/107 (2%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
R+ PWLV+Q++ Q G+ WVN + F IPW+H R Q+ D IF+AWA+ TG Y
Sbjct 7 RILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQE-DFGIFQAWAEATGAYV 65
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCS 122
G D+ D WK N R ALN+ RL D +D P P+KIYE +
Sbjct 66 PGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKD-PHDPHKIYEFVN 111
>2o6g_D F Interferon regulatory factor 3
Length=123
Score = 91.3 bits (225), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 47/107 (44%), Positives = 62/107 (58%), Gaps = 2/107 (2%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
R+ PWLV+Q++ Q G+ WVN + F IPW+H R Q+ D IF+AWA+ TG Y
Sbjct 7 RILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQE-DFGIFQAWAEATGAYV 65
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCS 122
G D+ D WK N R ALN+ RL D +D P P+KIYE +
Sbjct 66 PGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKD-PHDPHKIYEFVN 111
>2pi0_E C Interferon regulatory factor 3
Length=116
Score = 90.9 bits (224), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 61/106 (58%), Gaps = 2/106 (2%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
R+ PWLV+Q++ Q G+ WVN + F IPW+H R Q+ D IF+AWA+ TG Y
Sbjct 10 RILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQE-DFGIFQAWAEATGAYV 68
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
G D+ D WK N R ALN+ RL D +D P P+KIYE
Sbjct 69 PGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKD-PHDPHKIYEFV 113
>7jfm_C B Interferon regulatory factor 3
Length=214
Score = 90.1 bits (222), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 14/203 (7%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIPSD 308
+ E+ YRGR T+ P G RL S + T + + V P PE +D
Sbjct 17 EFEVTAFYRGRQVFQQTLFCPGGLRLVGSTADMT---------LXXQPVTLPDPEGFLTD 67
Query 309 K-QRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP---IQRE 364
K + Y Q+L L GL L GQ L+A RL FW+ DS P + ++
Sbjct 68 KLVKEYVGQVLKGLGNGLALWQAGQCLWAQRLGHSHAFWALGEELLPDSGRGPDGEVHKD 127
Query 365 VKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAAR 424
+F L F+ +LI F +G ++P + ++FC GE WP +P K+L+ V+VVP +
Sbjct 128 KDGAVFDLRPFVADLIAFMEGSGHSPR-YTLWFCMGEMWPQDQPWVKRLVMVKVVPTCLK 186
Query 425 LLLEMFSGELSWSADSIRLQISN 447
LLEM + ++ L ISN
Sbjct 187 ELLEMAREGGASXLKTVDLHISN 209
>2pi0_F D Interferon regulatory factor 3
Length=116
Score = 85.9 bits (211), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 60/107 (56%), Gaps = 2/107 (2%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
R+ PWLV+Q++ Q G+ WVN + F IPW+H R + IF+AWA+ TG Y
Sbjct 10 RILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQD-AXXXXXGIFQAWAEATGAYV 68
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCS 122
G D+ D WK N R ALN+ RL D +D P P+KIYE +
Sbjct 69 PGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKD-PHDPHKIYEFVN 114
>2pi0_C A Interferon regulatory factor 3
Length=116
Score = 84.3 bits (207), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (55%), Gaps = 2/106 (2%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
R+ PWLV+Q++ Q G+ WVN + F IPW+H R IF+AWA+ TG Y
Sbjct 10 RILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRXXXXXXXXG-IFQAWAEATGAYV 68
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
G D+ D WK N R ALN+ RL D +D P P+KIYE
Sbjct 69 PGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKD-PHDPHKIYEFV 113
>1qwt_B B Interferon regulatory factor 3
Length=255
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 26/222 (12%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQ--VRFPSPEDIP 306
+ E+ YRGR TIS P G RL S++ G +L V P P
Sbjct 31 EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV----------GDRTLPGWPVTLPDPGMSL 80
Query 307 SDKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP----- 360
+D+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 81 TDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPD 136
Query 361 --IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQV 418
+ ++ + +F L F+ +LI F +G + P + ++FC GE WP +P K+L+ V+V
Sbjct 137 GEVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKV 195
Query 419 VPVAARLLLEMFS-GELSWSADSIRLQISNPDLKDRMVEQFK 459
VP R L+EM G S +++ L ISN +Q+K
Sbjct 196 VPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYK 237
>1qwt_A A Interferon regulatory factor 3
Length=255
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 26/222 (12%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQ--VRFPSPEDIP 306
+ E+ YRGR TIS P G RL S++ G +L V P P
Sbjct 31 EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV----------GDRTLPGWPVTLPDPGMSL 80
Query 307 SDKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP----- 360
+D+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 81 TDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPD 136
Query 361 --IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQV 418
+ ++ + +F L F+ +LI F +G + P + ++FC GE WP +P K+L+ V+V
Sbjct 137 GEVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKV 195
Query 419 VPVAARLLLEMFS-GELSWSADSIRLQISNPDLKDRMVEQFK 459
VP R L+EM G S +++ L ISN +Q+K
Sbjct 196 VPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYK 237
>5jej_E B Interferon regulatory factor 3
Length=242
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 26/222 (12%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQ--VRFPSPEDIP 306
+ E+ YRGR TIS P G RL S++ G +L V P P
Sbjct 18 EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV----------GDRTLPGWPVTLPDPGMSL 67
Query 307 SDKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP----- 360
+D+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 68 TDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPD 123
Query 361 --IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQV 418
+ ++ + +F L F+ +LI F +G + P + ++FC GE WP +P K+L+ V+V
Sbjct 124 GEVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKV 182
Query 419 VPVAARLLLEMFS-GELSWSADSIRLQISNPDLKDRMVEQFK 459
VP R L+EM G S +++ L ISN +Q+K
Sbjct 183 VPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYK 224
>5jeo_B A Interferon regulatory factor 3
Length=242
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 26/222 (12%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQ--VRFPSPEDIP 306
+ E+ YRGR TIS P G RL S++ G +L V P P
Sbjct 18 EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV----------GDRTLPGWPVTLPDPGMSL 67
Query 307 SDKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP----- 360
+D+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 68 TDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPD 123
Query 361 --IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQV 418
+ ++ + +F L F+ +LI F +G + P + ++FC GE WP +P K+L+ V+V
Sbjct 124 GEVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKV 182
Query 419 VPVAARLLLEMFS-GELSWSADSIRLQISNPDLKDRMVEQFK 459
VP R L+EM G S +++ L ISN +Q+K
Sbjct 183 VPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYK 224
>5jek_A A Interferon regulatory factor 3
Length=242
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 26/222 (12%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQ--VRFPSPEDIP 306
+ E+ YRGR TIS P G RL S++ G +L V P P
Sbjct 18 EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV----------GDRTLPGWPVTLPDPGMSL 67
Query 307 SDKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP----- 360
+D+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 68 TDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPD 123
Query 361 --IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQV 418
+ ++ + +F L F+ +LI F +G + P + ++FC GE WP +P K+L+ V+V
Sbjct 124 GEVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKV 182
Query 419 VPVAARLLLEMFS-GELSWSADSIRLQISNPDLKDRMVEQFK 459
VP R L+EM G S +++ L ISN +Q+K
Sbjct 183 VPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYK 224
>5jej_D A Interferon regulatory factor 3
Length=242
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 26/222 (12%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQ--VRFPSPEDIP 306
+ E+ YRGR TIS P G RL S++ G +L V P P
Sbjct 18 EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV----------GDRTLPGWPVTLPDPGMSL 67
Query 307 SDKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP----- 360
+D+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 68 TDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPD 123
Query 361 --IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQV 418
+ ++ + +F L F+ +LI F +G + P + ++FC GE WP +P K+L+ V+V
Sbjct 124 GEVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKV 182
Query 419 VPVAARLLLEMFS-GELSWSADSIRLQISNPDLKDRMVEQFK 459
VP R L+EM G S +++ L ISN +Q+K
Sbjct 183 VPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYK 224
>5jer_E A Interferon regulatory factor 3
Length=242
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 26/222 (12%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQ--VRFPSPEDIP 306
+ E+ YRGR TIS P G RL S++ G +L V P P
Sbjct 18 EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV----------GDRTLPGWPVTLPDPGMSL 67
Query 307 SDKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP----- 360
+D+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 68 TDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPD 123
Query 361 --IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQV 418
+ ++ + +F L F+ +LI F +G + P + ++FC GE WP +P K+L+ V+V
Sbjct 124 GEVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKV 182
Query 419 VPVAARLLLEMFS-GELSWSADSIRLQISNPDLKDRMVEQFK 459
VP R L+EM G S +++ L ISN +Q+K
Sbjct 183 VPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYK 224
>5jer_G E Interferon regulatory factor 3
Length=242
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 26/222 (12%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQ--VRFPSPEDIP 306
+ E+ YRGR TIS P G RL S++ G +L V P P
Sbjct 18 EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV----------GDRTLPGWPVTLPDPGMSL 67
Query 307 SDKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP----- 360
+D+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 68 TDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPD 123
Query 361 --IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQV 418
+ ++ + +F L F+ +LI F +G + P + ++FC GE WP +P K+L+ V+V
Sbjct 124 GEVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKV 182
Query 419 VPVAARLLLEMFS-GELSWSADSIRLQISNPDLKDRMVEQFK 459
VP R L+EM G S +++ L ISN +Q+K
Sbjct 183 VPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYK 224
>5jer_F C Interferon regulatory factor 3
Length=242
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 26/222 (12%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQ--VRFPSPEDIP 306
+ E+ YRGR TIS P G RL S++ G +L V P P
Sbjct 18 EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV----------GDRTLPGWPVTLPDPGMSL 67
Query 307 SDKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP----- 360
+D+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 68 TDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPD 123
Query 361 --IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQV 418
+ ++ + +F L F+ +LI F +G + P + ++FC GE WP +P K+L+ V+V
Sbjct 124 GEVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKV 182
Query 419 VPVAARLLLEMFS-GELSWSADSIRLQISNPDLKDRMVEQFK 459
VP R L+EM G S +++ L ISN +Q+K
Sbjct 183 VPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYK 224
>5jer_H G Interferon regulatory factor 3
Length=242
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 26/222 (12%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQ--VRFPSPEDIP 306
+ E+ YRGR TIS P G RL S++ G +L V P P
Sbjct 18 EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV----------GDRTLPGWPVTLPDPGMSL 67
Query 307 SDKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP----- 360
+D+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 68 TDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPD 123
Query 361 --IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQV 418
+ ++ + +F L F+ +LI F +G + P + ++FC GE WP +P K+L+ V+V
Sbjct 124 GEVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKV 182
Query 419 VPVAARLLLEMFS-GELSWSADSIRLQISNPDLKDRMVEQFK 459
VP R L+EM G S +++ L ISN +Q+K
Sbjct 183 VPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYK 224
>5jel_A A Interferon regulatory factor 3
Length=242
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 26/222 (12%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQ--VRFPSPEDIP 306
+ E+ YRGR TIS P G RL S++ G +L V P P
Sbjct 18 EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV----------GDRTLPGWPVTLPDPGMSL 67
Query 307 SDKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP----- 360
+D+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 68 TDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPD 123
Query 361 --IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQV 418
+ ++ + +F L F+ +LI F +G + P + ++FC GE WP +P K+L+ V+V
Sbjct 124 GEVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKV 182
Query 419 VPVAARLLLEMFS-GELSWSADSIRLQISNPDLKDRMVEQFK 459
VP R L+EM G S +++ L ISN +Q+K
Sbjct 183 VPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYK 224
>5jek_B B Interferon regulatory factor 3
Length=242
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 26/222 (12%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQ--VRFPSPEDIP 306
+ E+ YRGR TIS P G RL S++ G +L V P P
Sbjct 18 EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV----------GDRTLPGWPVTLPDPGMSL 67
Query 307 SDKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP----- 360
+D+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 68 TDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPD 123
Query 361 --IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQV 418
+ ++ + +F L F+ +LI F +G + P + ++FC GE WP +P K+L+ V+V
Sbjct 124 GEVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKV 182
Query 419 VPVAARLLLEMFS-GELSWSADSIRLQISNPDLKDRMVEQFK 459
VP R L+EM G S +++ L ISN +Q+K
Sbjct 183 VPTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYK 224
>7jfm_A A Interferon regulatory factor 3
Length=214
Score = 87.0 bits (214), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/202 (32%), Positives = 95/202 (47%), Gaps = 14/202 (7%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIPSD 308
+ E+ YRGR T+ P G RL S + T + + V P PE +D
Sbjct 17 EFEVTAFYRGRQVFQQTLFCPGGLRLVGSTADMT---------LPWQPVTLPDPEGFLTD 67
Query 309 K-QRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP---IQRE 364
K + Y Q+L L GL L GQ L+A RL FW+ DS P + ++
Sbjct 68 KLVKEYVGQVLKGLGNGLALWQAGQCLWAQRLGHSHAFWALGEELLPDSGRGPDGEVHKD 127
Query 365 VKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVPVAAR 424
+F L F+ +LI F +G ++P + ++FC GE WP +P K+L+ V+VVP +
Sbjct 128 KDGAVFDLRPFVADLIAFMEGSGHSPR-YTLWFCMGEMWPQDQPWVKRLVMVKVVPTCLK 186
Query 425 LLLEMFSGELSWSADSIRLQIS 446
LLEM + ++ L IS
Sbjct 187 ELLEMAREGGASXLKTVDLHIS 208
>3qu6_A A IRF3 protein
Length=116
Score = 84.0 bits (206), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/106 (42%), Positives = 59/106 (56%), Gaps = 2/106 (2%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
R+ PWLV+Q++ Q G+ WVN + F IPW+H + D IF+AWA+ TG Y
Sbjct 10 RILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHXXXXXXXXE-DFGIFQAWAEATGAYV 68
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
G D+ D WK N R A+N+ RL D +D P P+KIYE
Sbjct 69 PGRDKPDLPTWKRNFRSAMNRKEGLRLAEDRSKD-PHDPHKIYEFV 113
>3qu6_B B IRF3 protein
Length=116
Score = 84.0 bits (206), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/106 (42%), Positives = 59/106 (56%), Gaps = 2/106 (2%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
R+ PWLV+Q++ Q G+ WVN + F IPW+H + D IF+AWA+ TG Y
Sbjct 10 RILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHXXXXXXXXE-DFGIFQAWAEATGAYV 68
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
G D+ D WK N R A+N+ RL D +D P P+KIYE
Sbjct 69 PGRDKPDLPTWKRNFRSAMNRKEGLRLAEDRSKD-PHDPHKIYEFV 113
>1j2f_B B Interferon regulatory factor 3
Length=258
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/221 (32%), Positives = 105/221 (48%), Gaps = 24/221 (11%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFG-PISLEQVRFPSPEDIPS 307
+ E+ YRGR TIS P G RL S++ L G P++L P P +
Sbjct 34 EFEVTAFYRGRQVFQQTISCPEGLRLVGSEVXXXT----LPGWPVTL-----PDPGMSLT 84
Query 308 DKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP------ 360
D+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 85 DRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPDG 140
Query 361 -IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVV 419
+ ++ + +F L F+ +LI F +G + P + ++FC GE WP +P K+L+ V+VV
Sbjct 141 EVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKVV 199
Query 420 PVAARLLLEMFS-GELSWSADSIRLQISNPDLKDRMVEQFK 459
P R L+EM G S +++ L ISN +Q+K
Sbjct 200 PTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYK 240
>3a77_B B Interferon regulatory factor 3
Length=250
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/221 (32%), Positives = 104/221 (47%), Gaps = 24/221 (11%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFG-PISLEQVRFPSPEDIPS 307
+ E+ YRGR TIS P G RL S+ L G P++L P P +
Sbjct 18 EFEVTAFYRGRQVFQQTISCPEGLRLVGSEXXXXT----LPGWPVTL-----PDPGMSLT 68
Query 308 DKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP------ 360
D+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 69 DRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPDG 124
Query 361 -IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVV 419
+ ++ + +F L F+ +LI F +G + P + ++FC GE WP +P K+L+ V+VV
Sbjct 125 EVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKVV 183
Query 420 PVAARLLLEMFS-GELSWSADSIRLQISNPDLKDRMVEQFK 459
P R L+EM G S +++ L ISN +Q+K
Sbjct 184 PTCLRALVEMARVGGASXLENTVDLHISNSHPLXLTSDQYK 224
>5jem_C B Interferon regulatory factor 3
Length=213
Score = 85.9 bits (211), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 22/208 (11%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIPSD 308
+ E+ YRGR TIS P G RL S++ ++ P++L P P +D
Sbjct 18 EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV---GDRTLPGWPVTL-----PDPGMSLTD 69
Query 309 KQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP------- 360
+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 70 RGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPDGE 125
Query 361 IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVP 420
+ ++ + +F L F+ +LI F +G +P + ++FC GE WP +P K+L+ V+VVP
Sbjct 126 VPKDKEGGVFDLGPFIVDLITFTEGSGRSPR-YALWFCVGESWPQDQPWTKRLVMVKVVP 184
Query 421 VAARLLLEMFS-GELSWSADSIRLQISN 447
R L+EM G S +++ L I N
Sbjct 185 TCLRALVEMARVGGASELENTVDLHIEN 212
>5jem_E E Interferon regulatory factor 3
Length=213
Score = 85.9 bits (211), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 22/208 (11%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIPSD 308
+ E+ YRGR TIS P G RL S++ ++ P++L P P +D
Sbjct 18 EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV---GDRTLPGWPVTL-----PDPGMSLTD 69
Query 309 KQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP------- 360
+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 70 RGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPDGE 125
Query 361 IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVP 420
+ ++ + +F L F+ +LI F +G +P + ++FC GE WP +P K+L+ V+VVP
Sbjct 126 VPKDKEGGVFDLGPFIVDLITFTEGSGRSPR-YALWFCVGESWPQDQPWTKRLVMVKVVP 184
Query 421 VAARLLLEMFS-GELSWSADSIRLQISN 447
R L+EM G S +++ L I N
Sbjct 185 TCLRALVEMARVGGASELENTVDLHIEN 212
>5jem_A A Interferon regulatory factor 3
Length=213
Score = 85.9 bits (211), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 22/208 (11%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIPSD 308
+ E+ YRGR TIS P G RL S++ ++ P++L P P +D
Sbjct 18 EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV---GDRTLPGWPVTL-----PDPGMSLTD 69
Query 309 KQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP------- 360
+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 70 RGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPDGE 125
Query 361 IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVP 420
+ ++ + +F L F+ +LI F +G +P + ++FC GE WP +P K+L+ V+VVP
Sbjct 126 VPKDKEGGVFDLGPFIVDLITFTEGSGRSPR-YALWFCVGESWPQDQPWTKRLVMVKVVP 184
Query 421 VAARLLLEMFS-GELSWSADSIRLQISN 447
R L+EM G S +++ L I N
Sbjct 185 TCLRALVEMARVGGASELENTVDLHIEN 212
>3a77_C C Interferon regulatory factor 3
Length=250
Score = 86.7 bits (213), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/221 (32%), Positives = 103/221 (47%), Gaps = 24/221 (11%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFG-PISLEQVRFPSPEDIPS 307
+ E+ YRGR TIS P G RL S L G P++L P P +
Sbjct 18 EFEVTAFYRGRQVFQQTISCPEGLRLVGSXXXXXT----LPGWPVTL-----PDPGMSLT 68
Query 308 DKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP------ 360
D+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 69 DRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPDG 124
Query 361 -IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVV 419
+ ++ + +F L F+ +LI F +G +P + ++FC GE WP +P K+L+ V+VV
Sbjct 125 EVPKDKEGGVFDLGPFIVDLITFTEGSGRSPR-YALWFCVGESWPQDQPWTKRLVMVKVV 183
Query 420 PVAARLLLEMFS-GELSWSADSIRLQISNPDLKDRMVEQFK 459
P R L+EM G S +++ L ISN +Q+K
Sbjct 184 PTCLRALVEMARVGGASXLENTVDLHISNSHPLXLTSDQYK 224
>5jem_G G Interferon regulatory factor 3
Length=213
Score = 85.5 bits (210), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 22/208 (11%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIPSD 308
+ E+ YRGR TIS P G RL S++ ++ P++L P P +D
Sbjct 18 EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV---GDRTLPGWPVTL-----PDPGMSLTD 69
Query 309 KQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP------- 360
+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 70 RGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPDGE 125
Query 361 IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVP 420
+ ++ + +F L F+ +LI F +G + P + ++FC GE WP +P K+L+ V+VVP
Sbjct 126 VPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKVVP 184
Query 421 VAARLLLEMFS-GELSWSADSIRLQISN 447
R L+EM G S +++ L I N
Sbjct 185 TCLRALVEMARVGGASELENTVDLHIEN 212
>1zoq_A A Interferon regulatory factor 3
Length=191
Score = 84.7 bits (208), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/189 (32%), Positives = 92/189 (49%), Gaps = 21/189 (11%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIPSD 308
+ E+ YRGR TIS P G RL S++ ++ P++L P P +D
Sbjct 8 EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV---GDRTLPGWPVTL-----PDPGMSLTD 59
Query 309 KQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP------- 360
+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 60 RGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPDGE 115
Query 361 IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVP 420
+ ++ + +F L F+ +LI F +G +P + ++FC GE WP +P K+L+ V+VVP
Sbjct 116 VPKDKEGGVFDLGPFIVDLITFTEGSGRSPR-YALWFCVGESWPQDQPWTKRLVMVKVVP 174
Query 421 VAARLLLEM 429
R L+EM
Sbjct 175 TCLRALVEM 183
>1zoq_C B Interferon regulatory factor 3
Length=191
Score = 84.7 bits (208), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/189 (32%), Positives = 92/189 (49%), Gaps = 21/189 (11%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRFPSPEDIPSD 308
+ E+ YRGR TIS P G RL S++ ++ P++L P P +D
Sbjct 8 EFEVTAFYRGRQVFQQTISCPEGLRLVGSEV---GDRTLPGWPVTL-----PDPGMSLTD 59
Query 309 KQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP------- 360
+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 60 RGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPDGE 115
Query 361 IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVVP 420
+ ++ + +F L F+ +LI F +G +P + ++FC GE WP +P K+L+ V+VVP
Sbjct 116 VPKDKEGGVFDLGPFIVDLITFTEGSGRSPR-YALWFCVGESWPQDQPWTKRLVMVKVVP 174
Query 421 VAARLLLEM 429
R L+EM
Sbjct 175 TCLRALVEM 183
>3a77_A A Interferon regulatory factor 3
Length=250
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 103/221 (47%), Gaps = 24/221 (11%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFG-PISLEQVRFPSPEDIPS 307
+ E+ YRGR TIS P G RL + L G P++L P P +
Sbjct 18 EFEVTAFYRGRQVFQQTISCPEGLRL----VXXXXXXXTLPGWPVTL-----PDPGMSLT 68
Query 308 DKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP------ 360
D+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 69 DRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPDG 124
Query 361 -IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVV 419
+ ++ + +F L F+ +LI F +G + P + ++FC GE WP +P K+L+ V+VV
Sbjct 125 EVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKVV 183
Query 420 PVAARLLLEMFS-GELSWSADSIRLQISNPDLKDRMVEQFK 459
P R L+EM G S +++ L ISN +Q+K
Sbjct 184 PTCLRALVEMARVGGASXLENTVDLHISNSHPLXLTSDQYK 224
>2o61_C A Transcription factor p65/Interferon regulatory factor
7/Interferon regulatory factor 3 fusion protein
Length=540
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 60/104 (58%), Gaps = 2/104 (2%)
Query 19 PWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYTEGV 78
PWLV+Q++ Q G+ WVN + F IPW+H R Q+ D IF+AWA+ TG Y G
Sbjct 430 PWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQE-DFGIFQAWAEATGAYVPGR 488
Query 79 DEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCS 122
D+ D WK N R ALN+ RL D +D P P+KIYE +
Sbjct 489 DKPDLPTWKRNFRSALNRKEGLRLAEDRSKD-PHDPHKIYEFVN 531
Score = 74.7 bits (182), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 59/114 (52%), Gaps = 11/114 (10%)
Query 14 RVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGK 73
RV WL+ +++S Y GLQW++ + F +PW+H R S+ D IFKAWA G+
Sbjct 293 RVLFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLSE-ADARIFKAWAVARGR 351
Query 74 YTEG---------VDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIY 118
+ + A+ A WK N RCAL +R F ++ D D P +K+Y
Sbjct 352 WPPSSRXXXPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSGD-PADQHKVY 404
>3a77_D D Interferon regulatory factor 3
Length=250
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 103/221 (47%), Gaps = 24/221 (11%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFG-PISLEQVRFPSPEDIPS 307
+ E+ YRGR TIS P G RL + L G P++L P P +
Sbjct 18 EFEVTAFYRGRQVFQQTISCPEGLRL----VGXXXXXXXLPGWPVTL-----PDPGMSLT 68
Query 308 DKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP------ 360
D+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 69 DRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPDG 124
Query 361 -IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVV 419
+ ++ + +F L F+ +LI F +G + P + ++FC GE WP +P K+L+ V+VV
Sbjct 125 EVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKVV 183
Query 420 PVAARLLLEMFS-GELSWSADSIRLQISNPDLKDRMVEQFK 459
P R L+EM G S +++ L ISN +Q+K
Sbjct 184 PTCLRALVEMARVGGASXLENTVDLHISNSHPLXLTSDQYK 224
>1j2f_A A Interferon regulatory factor 3
Length=258
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 103/221 (47%), Gaps = 24/221 (11%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFG-PISLEQVRFPSPEDIPS 307
+ E+ YRGR TIS P G RL + L G P++L P P +
Sbjct 34 EFEVTAFYRGRQVFQQTISCPEGLRL----VGXXXXXXXLPGWPVTL-----PDPGMSLT 84
Query 308 DKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP------ 360
D+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 85 DRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPDG 140
Query 361 -IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVV 419
+ ++ + +F L F+ +LI F +G + P + ++FC GE WP +P K+L+ V+VV
Sbjct 141 EVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKVV 199
Query 420 PVAARLLLEMFS-GELSWSADSIRLQISNPDLKDRMVEQFK 459
P R L+EM G S +++ L ISN +Q+K
Sbjct 200 PTCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYK 240
>7jfl_A A Interferon regulatory factor 3
Length=217
Score = 84.0 bits (206), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 99/208 (48%), Gaps = 24/208 (12%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFG-PISLEQVRFPSPEDIPS 307
+ E+ YRGR TIS P G RL S+ L G P++L P P +
Sbjct 18 EFEVTAFYRGRQVFQQTISCPEGLRLVGSEXXXXX----LPGWPVTL-----PDPGMSLT 68
Query 308 DKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP------ 360
D+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 69 DRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPDG 124
Query 361 -IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVV 419
+ ++ + +F L F+ +LI F +G + P + ++FC GE WP +P K+L+ V+VV
Sbjct 125 EVPKDKEGGVFDLGPFIVDLITFTEG-SGRSPRYALWFCVGESWPQDQPWTKRLVMVKVV 183
Query 420 PVAARLLLEMFS-GELSWSADSIRLQIS 446
P R L+EM G S +++ L IS
Sbjct 184 PTCLRALVEMARVGGASXLENTVDLHIS 211
>3qu6_C C IRF3 protein
Length=116
Score = 80.5 bits (197), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/106 (41%), Positives = 58/106 (55%), Gaps = 2/106 (2%)
Query 16 RLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGKYT 75
R+ PWLV+Q++ Q G+ WVN + F IPW+ + D IF+AWA+ TG Y
Sbjct 10 RILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKXXXXXXXXXE-DFGIFQAWAEATGAYV 68
Query 76 EGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
G D+ D WK N R A+N+ RL D +D P P+KIYE
Sbjct 69 PGRDKPDLPTWKRNFRSAMNRKEGLRLAEDRSKD-PHDPHKIYEFV 113
>7jfl_C B Interferon regulatory factor 3
Length=217
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/208 (32%), Positives = 98/208 (47%), Gaps = 24/208 (12%)
Query 249 DLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFG-PISLEQVRFPSPEDIPS 307
+ E+ YRGR TIS P G RL + L G P++L P P +
Sbjct 18 EFEVTAFYRGRQVFQQTISCPEGLRL----VGXXXXXRTLPGWPVTL-----PDPGMSLT 68
Query 308 DKQRF-YTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPNP------ 360
D+ Y +L L GL L GQ L+A RL C +W A + + PN
Sbjct 69 DRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYW----AVSEELLPNSGHGPDG 124
Query 361 -IQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVV 419
+ ++ + +F L F+ +LI F +G +P + ++FC GE WP +P K+L+ V+VV
Sbjct 125 EVPKDKEGGVFDLGPFIVDLITFTEGSGRSPR-YALWFCVGESWPQDQPWTKRLVMVKVV 183
Query 420 PVAARLLLEMFS-GELSWSADSIRLQIS 446
P R L+EM G S +++ L IS
Sbjct 184 PTCLRALVEMARVGGASXLENTVDLHIS 211
>3qu3_A A Interferon regulatory factor 7
Length=137
Score = 75.5 bits (184), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/119 (37%), Positives = 63/119 (53%), Gaps = 13/119 (11%)
Query 14 RVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGK 73
RV WL+ +V+S QY GLQW+N + +F +PW+H R ++ D IFKAWA G+
Sbjct 12 RVLFGDWLLGEVSSGQYEGLQWLNEARTVFRVPWKHFGRRDLDEE-DAQIFKAWAVARGR 70
Query 74 Y-TEGVD----------EADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
+ GV+ + WK N RCAL+ + F L D D P P+K+YE+
Sbjct 71 WPPSGVNLPPPEAEAAERRERRGWKTNFRCALHSTGRFILRQDNSGD-PVDPHKVYELS 128
>3qu3_C C Interferon regulatory factor 7
Length=137
Score = 75.1 bits (183), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/119 (37%), Positives = 63/119 (53%), Gaps = 13/119 (11%)
Query 14 RVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGK 73
RV WL+ +V+S QY GLQW+N + +F +PW+H R ++ D IFKAWA G+
Sbjct 12 RVLFGDWLLGEVSSGQYEGLQWLNEARTVFRVPWKHFGRRDLDEE-DAQIFKAWAVARGR 70
Query 74 Y-TEGVD----------EADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVC 121
+ GV+ + WK N RCAL+ + F L D D P P+K+YE+
Sbjct 71 WPPSGVNLPPPEAEAAERRERRGWKTNFRCALHSTGRFILRQDNSGD-PVDPHKVYELS 128
>3qu3_B B Interferon regulatory factor 7
Length=137
Score = 75.1 bits (183), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 63/118 (53%), Gaps = 13/118 (11%)
Query 14 RVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKETGK 73
RV WL+ +V+S QY GLQW+N + +F +PW+H R ++ D IFKAWA G+
Sbjct 12 RVLFGDWLLGEVSSGQYEGLQWLNEARTVFRVPWKHFGRRDLDEE-DAQIFKAWAVARGR 70
Query 74 Y-TEGVD----------EADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV 120
+ GV+ + WK N RCAL+ + F L D D P P+K+YE+
Sbjct 71 WPPSGVNLPPPEAEAAERRERRGWKTNFRCALHSTGRFILRQDNSGD-PVDPHKVYEL 127
>5oem_A A Interferon regulatory factor 9
Length=189
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/189 (31%), Positives = 84/189 (44%), Gaps = 21/189 (11%)
Query 243 HMLPLTD---LEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRF 299
H LPL L + F Y GR + + CRL EA+ + S+EQV F
Sbjct 8 HQLPLNSDYSLLLTFIYGGRVVGKTQVHSL-DCRLV---AEASDSES------SMEQVEF 57
Query 300 PSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPN 359
P P+ + T LL+ LDRG+++ + L+ RLC + W+ P A
Sbjct 58 PKPDPLEP------TQHLLNQLDRGVLVASNSRGLFVQRLCPIPISWNAPEAPPGPGPHL 111
Query 360 PIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVV 419
+ +LF +F +L + +GQ PP F+ F EE P ++ LITVQ+
Sbjct 112 LPSNKC-VELFKTTYFCRDLAQYFQGQ-GPPPKFQATLHFWEESPGSSHSQENLITVQME 169
Query 420 PVAARLLLE 428
AR LLE
Sbjct 170 QAFARHLLE 178
>5oen_A A Interferon regulatory factor 9
Length=171
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (46%), Gaps = 8/136 (6%)
Query 293 SLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCAS 352
S+EQV FP P+ + T LL+ LDRG+++ + L+ RLC + W+ P A
Sbjct 42 SMEQVEFPKPDPLEP------TQHLLNQLDRGVLVASNSRGLFVQRLCPIPISWNAPEAP 95
Query 353 AHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKK 412
+ +LF +F +L + +GQ PP F+ F ++
Sbjct 96 PGPGPHLLPSNKC-VELFKTTYFCRDLAQYFQGQ-GPPPKFQATLHFWAAXXXXXXSQEN 153
Query 413 LITVQVVPVAARLLLE 428
LITVQ+ AR LLE
Sbjct 154 LITVQMEQAFARHLLE 169
>4hly_B B K9
Length=132
Score = 37.4 bits (85), Expect = 0.081, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 23/33 (70%), Gaps = 0/33 (0%)
Query 14 RVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIP 46
+ +K W+V QVNS ++PG++W + E+ F IP
Sbjct 25 KASIKDWIVCQVNSGKFPGVEWEDEERTRFRIP 57
>4hly_A A K9
Length=132
Score = 37.4 bits (85), Expect = 0.081, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 23/33 (70%), Gaps = 0/33 (0%)
Query 14 RVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIP 46
+ +K W+V QVNS ++PG++W + E+ F IP
Sbjct 25 KASIKDWIVCQVNSGKFPGVEWEDEERTRFRIP 57
>4hlx_B B K9
Length=132
Score = 37.4 bits (85), Expect = 0.084, Method: Composition-based stats.
Identities = 14/30 (47%), Positives = 22/30 (73%), Gaps = 0/30 (0%)
Query 17 LKPWLVAQVNSCQYPGLQWVNGEKKLFCIP 46
+K W+V QVNS ++PG++W + E+ F IP
Sbjct 28 IKDWIVCQVNSGKFPGVEWEDEERTRFRIP 57
>4hlx_A A K9
Length=132
Score = 37.4 bits (85), Expect = 0.090, Method: Composition-based stats.
Identities = 14/30 (47%), Positives = 22/30 (73%), Gaps = 0/30 (0%)
Query 17 LKPWLVAQVNSCQYPGLQWVNGEKKLFCIP 46
+K W+V QVNS ++PG++W + E+ F IP
Sbjct 28 IKDWIVCQVNSGKFPGVEWEDEERTRFRIP 57
>4hlx_D D K9
Length=132
Score = 37.4 bits (85), Expect = 0.090, Method: Composition-based stats.
Identities = 14/30 (47%), Positives = 22/30 (73%), Gaps = 0/30 (0%)
Query 17 LKPWLVAQVNSCQYPGLQWVNGEKKLFCIP 46
+K W+V QVNS ++PG++W + E+ F IP
Sbjct 28 IKDWIVCQVNSGKFPGVEWEDEERTRFRIP 57
>4hlx_C C K9
Length=132
Score = 37.4 bits (85), Expect = 0.090, Method: Composition-based stats.
Identities = 14/30 (47%), Positives = 22/30 (73%), Gaps = 0/30 (0%)
Query 17 LKPWLVAQVNSCQYPGLQWVNGEKKLFCIP 46
+K W+V QVNS ++PG++W + E+ F IP
Sbjct 28 IKDWIVCQVNSGKFPGVEWEDEERTRFRIP 57
>6rxz_BA CK Putative U3 small nucleolar ribonucleoprotein
Length=297
Score = 32.7 bits (73), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/48 (42%), Positives = 30/48 (63%), Gaps = 2/48 (4%)
Query 231 GEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISN-PHGCRLFYS 277
G +LPDL++S L+D+ + ++RG P A+TIS+ PHG L S
Sbjct 120 GNLILPDLVMSAQRERLSDIILLHEHRG-TPTAITISHFPHGPTLMAS 166
>6rxy_BA CK Imp4
Length=297
Score = 32.7 bits (73), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/48 (42%), Positives = 30/48 (63%), Gaps = 2/48 (4%)
Query 231 GEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISN-PHGCRLFYS 277
G +LPDL++S L+D+ + ++RG P A+TIS+ PHG L S
Sbjct 120 GNLILPDLVMSAQRERLSDIILLHEHRG-TPTAITISHFPHGPTLMAS 166
>6rxx_M CK Putative U3 small nucleolar ribonucleoprotein
Length=297
Score = 32.7 bits (73), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/48 (42%), Positives = 30/48 (63%), Gaps = 2/48 (4%)
Query 231 GEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISN-PHGCRLFYS 277
G +LPDL++S L+D+ + ++RG P A+TIS+ PHG L S
Sbjct 120 GNLILPDLVMSAQRERLSDIILLHEHRG-TPTAITISHFPHGPTLMAS 166
>6rxv_BA CK Imp4
Length=297
Score = 32.7 bits (73), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/48 (42%), Positives = 30/48 (63%), Gaps = 2/48 (4%)
Query 231 GEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISN-PHGCRLFYS 277
G +LPDL++S L+D+ + ++RG P A+TIS+ PHG L S
Sbjct 120 GNLILPDLVMSAQRERLSDIILLHEHRG-TPTAITISHFPHGPTLMAS 166
>6rxu_BA CK Putative U3 small nucleolar ribonucleoprotein
Length=297
Score = 32.7 bits (73), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/48 (42%), Positives = 30/48 (63%), Gaps = 2/48 (4%)
Query 231 GEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISN-PHGCRLFYS 277
G +LPDL++S L+D+ + ++RG P A+TIS+ PHG L S
Sbjct 120 GNLILPDLVMSAQRERLSDIILLHEHRG-TPTAITISHFPHGPTLMAS 166
>6rxt_BA CK Putative U3 small nucleolar ribonucleoprotein
Length=297
Score = 32.7 bits (73), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/48 (42%), Positives = 30/48 (63%), Gaps = 2/48 (4%)
Query 231 GEQLLPDLLISPHMLPLTDLEIKFQYRGRPPRALTISN-PHGCRLFYS 277
G +LPDL++S L+D+ + ++RG P A+TIS+ PHG L S
Sbjct 120 GNLILPDLVMSAQRERLSDIILLHEHRG-TPTAITISHFPHGPTLMAS 166
Lambda K H a alpha
0.318 0.138 0.442 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 52031108608
Database: unitmol_20240501.fasta
Posted date: May 2, 2024 10:24 AM
Number of letters in database: 240,313,072
Number of sequences in database: 835,512
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40