[Multiple Alignment(many alignments)]
[Alignment Bar(many alignments)]
[show plain BLAST file]
BLASTP 2.11.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: unitmol_20240605.fasta
844,130 sequences; 243,118,326 total letters
Query= sp|P56962|STX17_HUMAN Syntaxin-17 OS=Homo sapiens OX=9606 GN=STX17
PE=1 SV=2
Length=302
Score E
Sequences producing significant alignments: (Bits) Value
7bv6_F F Syntaxin-17 123 3e-34
7bv6_B B Syntaxin-17 123 3e-34
7bv6_N N Syntaxin-17 121 1e-33
7bv6_V V Syntaxin-17 121 1e-33
4wy4_B B Syntaxin-17 118 1e-32
7bv6_J J Syntaxin-17 118 3e-32
7bv6_R R Syntaxin-17 110 2e-29
2nps_B B Syntaxin 13 45.4 2e-05
1gl2_B B SYNTAXIN 7 41.6 4e-04
3b5n_J J Protein SSO1 39.3 0.003
3b5n_B B Protein SSO1 38.9 0.004
3b5n_F F Protein SSO1 38.9 0.004
7bv4_H H Syntaxin-17 32.3 0.36
7bv4_F F Syntaxin-17 32.3 0.36
7bv4_D D Syntaxin-17 32.0 0.52
7bv4_B C Syntaxin-17 32.0 0.52
7xi3_B B Neuronal PAS domain protein 4 33.1 3.9
7xi4_B B Neuronal PAS domain protein 4 32.3 6.0
>7bv6_F F Syntaxin-17
Length=87
Score = 123 bits (308), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 61/61 (100%), Positives = 61/61 (100%), Gaps = 0/61 (0%)
Query 168 AAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKY 227
AAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKY
Sbjct 27 AAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKY 86
Query 228 K 228
K
Sbjct 87 K 87
>7bv6_B B Syntaxin-17
Length=87
Score = 123 bits (308), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 61/61 (100%), Positives = 61/61 (100%), Gaps = 0/61 (0%)
Query 168 AAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKY 227
AAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKY
Sbjct 27 AAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKY 86
Query 228 K 228
K
Sbjct 87 K 87
>7bv6_N N Syntaxin-17
Length=87
Score = 121 bits (304), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 60/60 (100%), Positives = 60/60 (100%), Gaps = 0/60 (0%)
Query 168 AAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKY 227
AAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKY
Sbjct 27 AAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKY 86
>7bv6_V V Syntaxin-17
Length=87
Score = 121 bits (304), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 60/60 (100%), Positives = 60/60 (100%), Gaps = 0/60 (0%)
Query 168 AAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKY 227
AAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKY
Sbjct 27 AAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKY 86
>4wy4_B B Syntaxin-17
Length=58
Score = 118 bits (295), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 58/58 (100%), Positives = 58/58 (100%), Gaps = 0/58 (0%)
Query 170 ESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKY 227
ESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKY
Sbjct 1 ESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKY 58
>7bv6_J J Syntaxin-17
Length=87
Score = 118 bits (295), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 59/59 (100%), Positives = 59/59 (100%), Gaps = 0/59 (0%)
Query 168 AAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAK 226
AAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAK
Sbjct 27 AAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAK 85
>7bv6_R R Syntaxin-17
Length=87
Score = 110 bits (276), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 55/55 (100%), Positives = 55/55 (100%), Gaps = 0/55 (0%)
Query 168 AAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLG 222
AAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLG
Sbjct 27 AAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLG 81
>2nps_B B Syntaxin 13
Length=71
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/56 (36%), Positives = 39/56 (70%), Gaps = 0/56 (0%)
Query 173 ETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKYK 228
+ LEAD+++++Q+ D +++++ Q + IDSI +V S+ V+VE + L +AA Y+
Sbjct 9 QQLEADILDVNQIFKDLAMMIHDQGDLIDSIEANVESSEVHVERASDQLQRAAYYQ 64
>1gl2_B B SYNTAXIN 7
Length=65
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (35%), Positives = 37/55 (67%), Gaps = 0/55 (0%)
Query 171 SWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAA 225
S LEAD+++++++ D ++++ Q + IDSI +V SA V+V++ + L +AA
Sbjct 10 SIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVESAEVHVQQANQQLSRAA 64
>3b5n_J J Protein SSO1
Length=69
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (58%), Gaps = 0/52 (0%)
Query 175 LEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAK 226
LE + EL+QL D LV QQE +D I +V A ++VE+G + KA K
Sbjct 15 LEKSMAELTQLFNDMEELVIEQQENVDVIDKNVEDAQLDVEQGVGHTDKAVK 66
>3b5n_B B Protein SSO1
Length=69
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (58%), Gaps = 0/52 (0%)
Query 175 LEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAK 226
LE + EL+QL D LV QQE +D I +V A ++VE+G + KA K
Sbjct 15 LEKSMAELTQLFNDMEELVIEQQENVDVIDKNVEDAQLDVEQGVGHTDKAVK 66
>3b5n_F F Protein SSO1
Length=69
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (58%), Gaps = 0/52 (0%)
Query 175 LEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAK 226
LE + EL+QL D LV QQE +D I +V A ++VE+G + KA K
Sbjct 15 LEKSMAELTQLFNDMEELVIEQQENVDVIDKNVEDAQLDVEQGVGHTDKAVK 66
>7bv4_H H Syntaxin-17
Length=22
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/15 (100%), Positives = 15/15 (100%), Gaps = 0/15 (0%)
Query 170 ESWETLEADLIELSQ 184
ESWETLEADLIELSQ
Sbjct 4 ESWETLEADLIELSQ 18
>7bv4_F F Syntaxin-17
Length=22
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/15 (100%), Positives = 15/15 (100%), Gaps = 0/15 (0%)
Query 170 ESWETLEADLIELSQ 184
ESWETLEADLIELSQ
Sbjct 4 ESWETLEADLIELSQ 18
>7bv4_D D Syntaxin-17
Length=22
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/15 (100%), Positives = 15/15 (100%), Gaps = 0/15 (0%)
Query 169 AESWETLEADLIELS 183
AESWETLEADLIELS
Sbjct 3 AESWETLEADLIELS 17
>7bv4_B C Syntaxin-17
Length=22
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/15 (100%), Positives = 15/15 (100%), Gaps = 0/15 (0%)
Query 169 AESWETLEADLIELS 183
AESWETLEADLIELS
Sbjct 3 AESWETLEADLIELS 17
>7xi3_B B Neuronal PAS domain protein 4
Length=348
Score = 33.1 bits (74), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/107 (32%), Positives = 51/107 (48%), Gaps = 14/107 (13%)
Query 205 DHVNSAAVNVEEGTKNLGKAAKYKLAALPVA---------GALIGG--MVGGPIGLLAGF 253
D +N+ N++E L +A K +L+ L + G G + GP GLL+
Sbjct 14 DQINAEIRNLKE-LLPLAEADKVRLSYLHIMSLACIYTRKGVFFAGGTPLAGPTGLLSAQ 72
Query 254 KVAGIAAALGGGVLGFTG-GKLIQRKKQKMMEKLTSSCPDLPSQTDK 299
++ I AAL G +L FT GKL+ + + E L S DL +Q D
Sbjct 73 ELEDIVAALPGFLLVFTAEGKLLY-LSESVSEHLGHSMVDLVAQGDS 118
>7xi4_B B Neuronal PAS domain protein 4
Length=356
Score = 32.3 bits (72), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 34/107 (32%), Positives = 51/107 (48%), Gaps = 14/107 (13%)
Query 205 DHVNSAAVNVEEGTKNLGKAAKYKLAALPVA---------GALIGG--MVGGPIGLLAGF 253
D +N+ N++E L +A K +L+ L + G G + GP GLL+
Sbjct 14 DQINAEIRNLKE-LLPLAEADKVRLSYLHIMSLACIYTRKGVFFAGGTPLAGPTGLLSAQ 72
Query 254 KVAGIAAALGGGVLGFTG-GKLIQRKKQKMMEKLTSSCPDLPSQTDK 299
++ I AAL G +L FT GKL+ + + E L S DL +Q D
Sbjct 73 ELEDIVAALPGFLLVFTAEGKLLYL-SESVSEHLGHSMVDLVAQGDS 118
Lambda K H a alpha
0.314 0.132 0.362 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 26406021424
Database: unitmol_20240605.fasta
Posted date: Jun 7, 2024 10:55 AM
Number of letters in database: 243,118,326
Number of sequences in database: 844,130
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40