[Multiple Alignment(many alignments)]
[Alignment Bar(many alignments)]
[show plain BLAST file]
BLASTP 2.11.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: unitmol_20240904.fasta
870,205 sequences; 251,418,593 total letters
Query= sp|P0DTG0|ORF3D_SARS2 Putative ORF3d protein OS=Severe acute
respiratory syndrome coronavirus 2 OX=2697049 PE=5 SV=1
Length=57
***** No hits found *****
Lambda K H a alpha
0.331 0.134 0.517 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 6333114144
Database: unitmol_20240904.fasta
Posted date: Sep 5, 2024 12:15 PM
Number of letters in database: 251,418,593
Number of sequences in database: 870,205
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40