[Multiple Alignment(many alignments)]
[Alignment Bar(many alignments)]
[show plain BLAST file]
BLASTP 2.11.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: unitmol_20240605.fasta
844,130 sequences; 243,118,326 total letters
Query= sp|O95786|RIGI_HUMAN Antiviral innate immune response receptor RIG-I
OS=Homo sapiens OX=9606 GN=RIGI PE=1 SV=2
Length=925
Score E
Sequences producing significant alignments: (Bits) Value
8dvs_A A Antiviral innate immune response receptor RIG-I 1420 0.0
7to0_A A Antiviral innate immune response receptor RIG-I 1420 0.0
7tnz_A A Antiviral innate immune response receptor RIG-I 1417 0.0
5f9f_I I Probable ATP-dependent RNA helicase DDX58 1402 0.0
5f9f_A A Probable ATP-dependent RNA helicase DDX58 1402 0.0
6kyv_F F Probable ATP-dependent RNA helicase DDX58 1399 0.0
6kyv_H H Probable ATP-dependent RNA helicase DDX58 1399 0.0
6kyv_B B Probable ATP-dependent RNA helicase DDX58 1399 0.0
6kyv_L L Probable ATP-dependent RNA helicase DDX58 1399 0.0
6kyv_J J Probable ATP-dependent RNA helicase DDX58 1399 0.0
6kyv_D D Probable ATP-dependent RNA helicase DDX58 1399 0.0
5f9f_E E Probable ATP-dependent RNA helicase DDX58 1398 0.0
5f9f_K K Probable ATP-dependent RNA helicase DDX58 1397 0.0
5f9f_G G Probable ATP-dependent RNA helicase DDX58 1391 0.0
7to2_A A Antiviral innate immune response receptor RIG-I 1391 0.0
5f9f_C C Probable ATP-dependent RNA helicase DDX58 1389 0.0
8dvu_A A Antiviral innate immune response receptor RIG-I 1389 0.0
7tny_A A Antiviral innate immune response receptor RIG-I 1382 0.0
7jl1_A A Antiviral innate immune response receptor RIG-I 1358 0.0
5f9h_G G Probable ATP-dependent RNA helicase DDX58 1350 0.0
5f98_A A Probable ATP-dependent RNA helicase DDX58 1343 0.0
7jl3_A A Antiviral innate immune response receptor RIG-I 1343 0.0
7jl3_C C Antiviral innate immune response receptor RIG-I 1343 0.0
7jl3_E E Antiviral innate immune response receptor RIG-I 1343 0.0
6gpg_C A Probable ATP-dependent RNA helicase DDX58 1341 0.0
5f98_C C Probable ATP-dependent RNA helicase DDX58 1340 0.0
5f98_G G Probable ATP-dependent RNA helicase DDX58 1337 0.0
5f98_I I Probable ATP-dependent RNA helicase DDX58 1337 0.0
5f9h_C C Probable ATP-dependent RNA helicase DDX58 1336 0.0
7tnx_A A Antiviral innate immune response receptor RIG-I 1333 0.0
8g7v_A A Antiviral innate immune response receptor RIG-I 1333 0.0
8g7u_A A Antiviral innate immune response receptor RIG-I 1333 0.0
8g7t_A A Antiviral innate immune response receptor RIG-I 1333 0.0
5f9h_A A Probable ATP-dependent RNA helicase DDX58 1333 0.0
5f9h_I I Probable ATP-dependent RNA helicase DDX58 1330 0.0
5f98_K K Probable ATP-dependent RNA helicase DDX58 1329 0.0
5e3h_A A Probable ATP-dependent RNA helicase DDX58 1325 0.0
5f98_E E Probable ATP-dependent RNA helicase DDX58 1321 0.0
5f9h_E E Probable ATP-dependent RNA helicase DDX58 1313 0.0
5f9h_K K Probable ATP-dependent RNA helicase DDX58 1310 0.0
8sd0_A A Antiviral innate immune response receptor RIG-I 1306 0.0
8scz_A A Antiviral innate immune response receptor RIG-I 1304 0.0
8dvr_A A Antiviral innate immune response receptor RIG-I 1304 0.0
7to1_A A Antiviral innate immune response receptor RIG-I 1304 0.0
2ykg_A A PROBABLE ATP-DEPENDENT RNA HELICASE DDX58 1297 0.0
8g7u_C C Antiviral innate immune response receptor RIG-I 1295 0.0
3zd6_A A PROBABLE ATP-DEPENDENT RNA HELICASE DDX58 1290 0.0
4bpb_A A PROBABLE ATP-DEPENDENT RNA HELICASE DDX58 1288 0.0
4ay2_A A PROBABLE ATP-DEPENDENT RNA HELICASE DDX58 1281 0.0
3zd7_A A PROBABLE ATP-DEPENDENT RNA HELICASE DDX58 1263 0.0
8g7v_C C Antiviral innate immune response receptor RIG-I 1262 0.0
8g7t_C C Antiviral innate immune response receptor RIG-I 1257 0.0
4on9_A A Probable ATP-dependent RNA helicase DDX58 1049 0.0
4on9_B B Probable ATP-dependent RNA helicase DDX58 1006 0.0
3tbk_A A RIG-I Helicase Domain 829 0.0
4a36_A A RETINOIC ACID INDUCIBLE PROTEIN I 653 0.0
4a36_B B RETINOIC ACID INDUCIBLE PROTEIN I 647 0.0
4a2w_A A RETINOIC ACID INDUCIBLE PROTEIN I 589 0.0
4a2q_B B RETINOIC ACID INDUCIBLE PROTEIN I 583 0.0
4a2w_B B RETINOIC ACID INDUCIBLE PROTEIN I 582 0.0
4a2q_A A RETINOIC ACID INDUCIBLE PROTEIN I 581 0.0
4a2q_C D RETINOIC ACID INDUCIBLE PROTEIN I 577 0.0
4a2q_D E RETINOIC ACID INDUCIBLE PROTEIN I 576 0.0
4a2p_A A RETINOIC ACID INDUCIBLE PROTEIN I 564 0.0
4nqk_D D Probable ATP-dependent RNA helicase DDX58 388 2e-128
4nqk_C C Probable ATP-dependent RNA helicase DDX58 388 2e-128
4nqk_B B Probable ATP-dependent RNA helicase DDX58 388 2e-128
4nqk_A A Probable ATP-dependent RNA helicase DDX58 388 2e-128
4p4h_F F Probable ATP-dependent RNA helicase DDX58 388 2e-128
4p4h_G G Probable ATP-dependent RNA helicase DDX58 388 2e-128
4p4h_B B Probable ATP-dependent RNA helicase DDX58 388 2e-128
4p4h_C C Probable ATP-dependent RNA helicase DDX58 388 2e-128
4p4h_E E Probable ATP-dependent RNA helicase DDX58 386 1e-127
4p4h_A A Probable ATP-dependent RNA helicase DDX58 386 1e-127
4p4h_D D Probable ATP-dependent RNA helicase DDX58 386 1e-127
4p4h_H H Probable ATP-dependent RNA helicase DDX58 386 1e-127
6g19_A A Interferon-induced helicase C domain-containing protein 1 369 2e-114
5jc3_A A Melanoma differentiation associated protein-5 369 3e-114
5jc3_D B Melanoma differentiation associated protein-5 365 6e-113
5jch_A A Melanoma differentiation associated protein-5 365 1e-112
5jcf_A A Melanoma differentiation associated protein-5 364 3e-112
5jcf_D B Melanoma differentiation associated protein-5 363 3e-112
6gjz_A A Interferon-induced helicase C domain-containing protein 1 369 3e-111
5jch_D B Melanoma differentiation associated protein-5 361 3e-111
6gkm_A A Interferon-induced helicase C domain-containing protein 1 368 9e-111
5jc7_B B Melanoma differentiation associated protein-5 360 9e-111
5jc7_A A Melanoma differentiation associated protein-5 359 1e-110
6gkh_A A Interferon-induced helicase C domain-containing protein 1 365 9e-110
7bkp_A A Interferon-induced helicase C domain-containing protein 1 358 5e-107
7jl2_E C Interferon-induced helicase C domain-containing protein 1 351 6e-107
7jl2_C A Interferon-induced helicase C domain-containing protein 1 351 6e-107
7jl2_G E Interferon-induced helicase C domain-containing protein 1 351 6e-107
7jl0_C A Interferon-induced helicase C domain-containing protein 1 351 6e-107
6g1s_A A Interferon-induced helicase C domain-containing protein 1 348 1e-106
6g1x_A A Interferon-induced helicase C domain-containing protein 1 347 3e-106
6h66_A A Interferon-induced helicase C domain-containing protein 1 355 3e-106
7nic_A A Interferon-induced helicase C domain-containing protein 1 355 5e-106
4gl2_A A Interferon-induced helicase C domain-containing protein 1 345 4e-105
4gl2_B B Interferon-induced helicase C domain-containing protein 1 343 1e-104
5jb2_A A LGP2 342 3e-104
6h61_A A Interferon-induced helicase C domain-containing protein 1 350 3e-104
7niq_A B Interferon-induced helicase C domain-containing protein 1 348 3e-103
5jbg_A A LGP2 338 5e-103
5jaj_A A LGP2 338 1e-102
6bzh_C C Probable ATP-dependent RNA helicase DDX58 303 4e-96
6bzh_B B Probable ATP-dependent RNA helicase DDX58 303 4e-96
6bzh_E E Probable ATP-dependent RNA helicase DDX58 303 6e-96
6bzh_A A Probable ATP-dependent RNA helicase DDX58 303 6e-96
6bzh_D D Probable ATP-dependent RNA helicase DDX58 303 6e-96
5jbj_A A LGP2 319 1e-95
7nga_C A Interferon-induced helicase C domain-containing protein 1 320 5e-93
7bkq_A A Isoform 2 of Interferon-induced helicase C domain-contai... 310 5e-92
2rmj_A A Probable ATP-dependent RNA helicase DDX58 285 3e-90
3og8_B B Antiviral innate immune response receptor RIG-I 262 2e-81
7bah_B B Antiviral innate immune response receptor RIG-I 261 2e-81
3og8_A A Antiviral innate immune response receptor RIG-I 259 1e-80
7mk1_B B Antiviral innate immune response receptor RIG-I 259 1e-80
7mk1_A A Antiviral innate immune response receptor RIG-I 259 1e-80
7bah_A A Antiviral innate immune response receptor RIG-I 259 1e-80
7bai_B B Antiviral innate immune response receptor RIG-I 259 2e-80
2qfd_A A Probable ATP-dependent RNA helicase DDX58 259 3e-80
2qfb_J J Probable ATP-dependent RNA helicase DDX58 259 3e-80
2qfb_I I Probable ATP-dependent RNA helicase DDX58 259 3e-80
2qfb_H H Probable ATP-dependent RNA helicase DDX58 259 3e-80
2qfb_G G Probable ATP-dependent RNA helicase DDX58 259 3e-80
2qfb_F F Probable ATP-dependent RNA helicase DDX58 259 3e-80
2qfb_E E Probable ATP-dependent RNA helicase DDX58 259 3e-80
2qfb_D D Probable ATP-dependent RNA helicase DDX58 259 3e-80
2qfb_C C Probable ATP-dependent RNA helicase DDX58 259 3e-80
2qfd_J J Probable ATP-dependent RNA helicase DDX58 259 3e-80
2qfd_I I Probable ATP-dependent RNA helicase DDX58 259 3e-80
2qfd_H H Probable ATP-dependent RNA helicase DDX58 259 3e-80
2qfd_G G Probable ATP-dependent RNA helicase DDX58 259 3e-80
2qfd_B B Probable ATP-dependent RNA helicase DDX58 259 3e-80
2qfd_F F Probable ATP-dependent RNA helicase DDX58 259 3e-80
2qfd_E E Probable ATP-dependent RNA helicase DDX58 259 3e-80
2qfd_D D Probable ATP-dependent RNA helicase DDX58 259 3e-80
2qfd_C C Probable ATP-dependent RNA helicase DDX58 259 3e-80
2qfb_B B Probable ATP-dependent RNA helicase DDX58 259 3e-80
2qfb_A A Probable ATP-dependent RNA helicase DDX58 259 3e-80
7bai_A A Antiviral innate immune response receptor RIG-I 258 6e-80
3ncu_B B RIG-I 258 8e-80
3ncu_A A RIG-I 258 8e-80
3lrr_B B Probable ATP-dependent RNA helicase DDX58 256 2e-79
3lrr_A A Probable ATP-dependent RNA helicase DDX58 256 2e-79
3lrn_A A Probable ATP-dependent RNA helicase DDX58 256 2e-79
3lrn_B B Probable ATP-dependent RNA helicase DDX58 256 2e-79
7bai_E E Antiviral innate immune response receptor RIG-I 255 6e-79
8t5s_A A Dicer-related helicase 256 5e-70
2lwd_A A Probable ATP-dependent RNA helicase DDX58 192 2e-56
2lwe_A A Probable ATP-dependent RNA helicase DDX58 189 2e-55
4a2x_C C RETINOIC ACID INDUCIBLE PROTEIN I 134 3e-35
4a2x_B B RETINOIC ACID INDUCIBLE PROTEIN I 134 3e-35
4a2x_A A RETINOIC ACID INDUCIBLE PROTEIN I 134 3e-35
4a2x_D D RETINOIC ACID INDUCIBLE PROTEIN I 134 3e-35
4a2v_A A RETINOIC ACID INDUCIBLE PROTEIN I 133 5e-35
1wp9_A A ATP-dependent RNA helicase, putative 129 6e-30
1wp9_B B ATP-dependent RNA helicase, putative 128 9e-30
3b6e_A A Interferon-induced helicase C domain-containing protein 1 119 6e-29
1wp9_F F ATP-dependent RNA helicase, putative 125 6e-29
1wp9_E E ATP-dependent RNA helicase, putative 125 6e-29
1wp9_C C ATP-dependent RNA helicase, putative 125 6e-29
1wp9_D D ATP-dependent RNA helicase, putative 125 7e-29
4i1s_A A Melanoma differentiation associated protein-5 114 9e-27
7w0e_C A Dicer-2, isoform A 95.9 1e-18
7w0f_A A Dicer-2, isoform A 95.9 1e-18
7w0d_D A Dicer-2, isoform A 95.9 1e-18
7w0d_E F Dicer-2, isoform A 95.5 1e-18
7w0b_A A Dicer-2, isoform A 95.5 1e-18
8hf1_D D Dicer-2, isoform A 95.5 1e-18
8hf1_A A Dicer-2, isoform A 95.5 1e-18
8hf1_G G Dicer-2, isoform A 95.5 1e-18
8hf0_A A Dicer-2, isoform A 95.5 1e-18
8hf0_D D Dicer-2, isoform A 95.5 1e-18
7w0c_A A Dicer-2, isoform A 95.5 2e-18
7w0a_H E Dicer-2, isoform A 95.1 2e-18
7w0a_A A Dicer-2, isoform A 95.1 2e-18
7eld_A A Endoribonuclease Dicer homolog 1 76.3 1e-12
7ele_A A Endoribonuclease Dicer homolog 1 76.3 1e-12
7xw3_A A Endoribonuclease Dicer 75.1 3e-12
5zam_A A Endoribonuclease Dicer 72.0 3e-11
5zal_A A Endoribonuclease Dicer 72.0 3e-11
5zak_A A Endoribonuclease Dicer 72.0 3e-11
7yym_A A Endoribonuclease Dicer 71.2 4e-11
7yz4_A A Endoribonuclease Dicer 71.2 4e-11
7zpj_A A Endoribonuclease Dicer 71.2 4e-11
7zpk_A A Endoribonuclease Dicer 71.2 4e-11
7v6c_A A Dicer-2, isoform A 66.2 1e-09
7v6b_A A Dicer-2, isoform A 66.2 1e-09
3ga3_A A Interferon-induced helicase C domain-containing protein ... 60.5 2e-09
2rqb_A A Interferon-induced helicase C domain-containing protein 1 59.7 3e-09
6bua_A A Dicer-2, isoform A 63.2 1e-08
3ts9_A A Interferon-induced helicase C domain-containing protein 1 55.5 9e-08
2rqa_A A ATP-dependent RNA helicase DHX58 53.5 5e-07
3eqt_A A ATP-dependent RNA helicase DHX58 53.1 7e-07
3eqt_B B ATP-dependent RNA helicase DHX58 53.1 7e-07
2w4r_A A PROBABLE ATP-DEPENDENT RNA HELICASE DHX58 52.8 1e-06
2w4r_D D PROBABLE ATP-DEPENDENT RNA HELICASE DHX58 50.1 9e-06
2w4r_C C PROBABLE ATP-DEPENDENT RNA HELICASE DHX58 50.1 9e-06
2w4r_B B PROBABLE ATP-DEPENDENT RNA HELICASE DHX58 50.1 9e-06
5v9x_A A ATP-dependent DNA helicase 51.2 5e-05
6qws_A A Pre-mRNA splicing helicase-like protein 50.4 1e-04
5m59_H G Pre-mRNA splicing helicase-like protein 50.4 1e-04
6qv4_A A Pre-mRNA splicing helicase-like protein 50.4 1e-04
6qv3_A A Pre-mRNA splicing helicase-like protein 50.4 1e-04
5m59_F E Pre-mRNA splicing helicase-like protein 50.4 1e-04
5m59_B A Pre-mRNA splicing helicase-like protein 50.1 1e-04
5m59_D C Pre-mRNA splicing helicase-like protein 50.1 1e-04
8dfv_A A Endoribonuclease Dcr-1 48.5 4e-04
8dg5_A A Endoribonuclease Dcr-1 48.5 5e-04
8dg7_A A Endoribonuclease Dcr-1 48.5 5e-04
8dgi_A A Endoribonuclease Dcr-1 48.1 5e-04
8dgj_A A Endoribonuclease Dcr-1 48.1 5e-04
6bu9_A A Dicer-2, isoform A 47.4 8e-04
8alz_B B Activating signal cointegrator 1 complex subunit 3 46.2 0.002
8y6o_I I Probable ATP-dependent RNA helicase DDX23 45.4 0.003
2zj5_A A Putative ski2-type helicase 45.4 0.003
2zj2_A A Putative ski2-type helicase 45.4 0.003
2zj8_A A Putative ski2-type helicase 45.1 0.004
2zja_A A Putative ski2-type helicase 45.1 0.004
7vpx_L E Probable ATP-dependent RNA helicase DDX46 43.9 0.009
7evo_L E RNA helicase 43.9 0.009
6y5q_F p Probable ATP-dependent RNA helicase DDX46 43.5 0.012
8arp_A A ATP-dependent RNA helicase DBP2 43.1 0.013
8arp_F F ATP-dependent RNA helicase DBP2 43.1 0.013
8arp_C C ATP-dependent RNA helicase DBP2 43.1 0.013
8ark_A A ATP-dependent RNA helicase DBP2 43.1 0.013
8ark_B B ATP-dependent RNA helicase DBP2 43.1 0.013
8arp_E E ATP-dependent RNA helicase DBP2 43.1 0.013
8arp_D D ATP-dependent RNA helicase DBP2 43.1 0.013
8arp_B B ATP-dependent RNA helicase DBP2 43.1 0.013
6y53_D p Probable ATP-dependent RNA helicase DDX46 42.4 0.029
8dga_A A Endoribonuclease Dcr-1 42.4 0.029
3jcm_I N Pre-mRNA-splicing helicase BRR2 42.4 0.031
5m5p_A A Pre-mRNA-splicing helicase BRR2 42.4 0.032
5dca_A A Pre-mRNA-splicing helicase BRR2 42.4 0.032
5m5p_C C Pre-mRNA-splicing helicase BRR2 42.4 0.034
5a9f_A A DNA POLYMERASE THETA 42.0 0.034
5lqw_C C Pre-mRNA-splicing helicase BRR2 42.0 0.036
9bha_A A DNA polymerase theta 42.0 0.036
9bha_B B DNA polymerase theta 42.0 0.037
5m52_A A Pre-mRNA-splicing helicase BRR2 42.0 0.037
5gan_I B Pre-mRNA-splicing helicase BRR2 42.0 0.037
5m52_C B Pre-mRNA-splicing helicase BRR2 42.0 0.038
9bh9_A A DNA polymerase theta 42.0 0.038
9bh9_B B DNA polymerase theta 42.0 0.038
9bh8_A A DNA polymerase theta 42.0 0.038
9bh8_B B DNA polymerase theta 42.0 0.038
5aga_A A DNA POLYMERASE THETA 42.0 0.038
5gm6_B B Pre-mRNA-splicing helicase BRR2 42.0 0.038
6uv1_A A Probable ATP-dependent RNA helicase DDX17 41.6 0.038
4bgd_A A PRE-MRNA-SPLICING HELICASE BRR2 42.0 0.039
5gao_I B Pre-mRNA-splicing helicase BRR2 42.0 0.039
5lj5_G B Pre-mRNA-splicing helicase BRR2 42.0 0.039
7b9v_E B Pre-mRNA-splicing helicase BRR2 42.0 0.039
5a9j_C C DNA POLYMERASE THETA 42.0 0.040
5zwm_AA D Pre-mRNA-splicing helicase BRR2 42.0 0.041
5nrl_I B Pre-mRNA-splicing helicase BRR2 42.0 0.041
5zwo_AA D Pre-mRNA-splicing helicase BRR2 42.0 0.041
9bh7_B B DNA polymerase theta 41.6 0.041
9bh7_A A DNA polymerase theta 41.6 0.041
5a9j_B B DNA POLYMERASE THETA 41.6 0.042
6uv1_B B Probable ATP-dependent RNA helicase DDX17 41.6 0.042
6uv2_A A Probable ATP-dependent RNA helicase DDX17 41.6 0.042
9bh6_A A DNA polymerase theta 41.6 0.043
9bh6_D D DNA polymerase theta 41.6 0.043
9bh6_B B DNA polymerase theta 41.6 0.043
9bh6_C C DNA polymerase theta 41.6 0.043
5a9j_D D DNA POLYMERASE THETA 41.6 0.043
4kbf_A A Heat resistant RNA dependent ATPase 41.2 0.044
4kbf_B B Heat resistant RNA dependent ATPase 41.2 0.044
4kbg_B B Heat resistant RNA dependent ATPase 41.2 0.044
5a9j_A A DNA POLYMERASE THETA 41.6 0.044
7dco_D D BRR2 isoform 1 42.0 0.044
6uv4_A A Probable ATP-dependent RNA helicase DDX17 41.2 0.047
6uv3_A A Probable ATP-dependent RNA helicase DDX17 41.2 0.048
2z0m_A A 337aa long hypothetical ATP-dependent RNA helicase deaD 40.8 0.058
6znq_A A Uncharacterized ATP-dependent helicase YprA 41.2 0.066
6znp_A A Uncharacterized ATP-dependent helicase YprA 41.2 0.066
6znq_B B Uncharacterized ATP-dependent helicase YprA 40.8 0.078
6znp_B B Uncharacterized ATP-dependent helicase YprA 40.8 0.084
8ark_C C ATP-dependent RNA helicase DBP2 40.4 0.10
8he5_O O DNA repair protein 40.0 0.16
7bdk_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 40.0 0.16
1fuk_A A EUKARYOTIC INITIATION FACTOR 4A 37.7 0.22
4kbg_A A Heat resistant RNA dependent ATPase 38.5 0.28
7zuw_BC CA RQC trigger complex helicase SLH1 39.3 0.29
7zrs_BC CA RQC trigger complex helicase SLH1 39.3 0.29
7zpq_BC CA SLH1 isoform 1 39.3 0.29
6p66_A A DNA repair protein RAD25 38.5 0.32
8vx9_B B HamB 38.9 0.34
5urk_A A U5 small nuclear ribonucleoprotein 200 kDa helicase 38.9 0.34
6p66_C C DNA repair protein RAD25 38.5 0.35
2fwr_A A DNA repair protein RAD25 38.5 0.36
8r0a_M B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.9 0.36
8h6j_M 5D U5 small nuclear ribonucleoprotein 200 kDa helicase 38.9 0.36
8h6e_M 5D U5 small nuclear ribonucleoprotein 200 kDa helicase 38.9 0.36
6qx9_RB 5B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.9 0.36
6qw6_S 5B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.9 0.36
8qxd_B B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.9 0.36
8y6o_E E U5 small nuclear ribonucleoprotein 200 kDa helicase 38.9 0.36
8r08_L B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.9 0.36
6ah0_B D U5 small nuclear ribonucleoprotein 200 kDa helicase 38.9 0.37
8vxy_D B HamB 38.9 0.37
5yzg_D D U5 small nuclear ribonucleoprotein 200 kDa helicase 38.9 0.39
8vxc_B A HamB 38.5 0.40
8vxa_C A HamB 38.5 0.40
3jcr_C C hBrr2 38.5 0.41
1gm5_A A RECG 38.5 0.42
7a5p_NA q U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.42
7bdj_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.44
7dvq_D D U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.46
5urm_B B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.47
4f93_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.48
4f92_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.48
6s8q_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.48
8bcc_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.48
8bcg_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.48
7bdl_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.48
7bdi_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.48
7px3_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.48
6s8o_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.49
7os2_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.49
4f91_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.49
8bch_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.49
8q7x_C B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.50
8c6j_I B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.50
8rc0_G B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.50
8bcb_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.50
8bce_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.50
8bc8_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.50
8bc9_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.50
6qdv_H B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.51
5urm_A A U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.51
4kit_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.51
8bcd_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.51
8bcf_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.51
8bca_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.51
5o9z_C C U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.51
8qo9_JA B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.51
8qzs_B B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.51
6icz_YA D U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.51
6ahd_KB D Brr2, U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.51
7abi_M s U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.51
7abg_H s U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.51
8h6k_E 5D U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.51
5z58_D D U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.51
5z57_D D U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.51
5z56_D D U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.51
8ch6_JA c U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.51
7w5b_D D U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.51
5xjc_D D U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.51
6ff7_GB r U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.51
8h6l_E 5D U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.51
7os1_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.52
6s9i_A B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.52
8r0b_B B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.52
8r09_JA B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.52
8rm5_JA B U5 small nuclear ribonucleoprotein 200 kDa helicase 38.5 0.52
1fuu_B B YEAST INITIATION FACTOR 4A 37.7 0.59
5urj_A A U5 small nuclear ribonucleoprotein 200 kDa helicase 37.7 0.76
7ase_A f kDDX60 37.7 0.78
7ask_A F kDDX60 37.7 0.78
4d25_A A BMVLG PROTEIN 37.4 0.79
4d26_A A BMVLG PROTEIN 37.4 0.79
4ovy_A A Haloacid dehalogenase domain protein hydrolase 36.6 1.1
2fzl_A A DNA repair protein RAD25, XPB 35.8 1.4
7dni_E A Interferon-induced helicase C domain-containing protein 1 34.7 3.0
3jcr_F F hPrp28 35.4 3.2
7dni_F B Interferon-induced helicase C domain-containing protein 1 34.7 3.3
2va8_B B SKI2-TYPE HELICASE 35.4 3.4
3nej_A A Heat resistant RNA dependent ATPase 34.7 3.4
5gju_A A ATP-dependent RNA helicase DeaD 34.7 3.4
2va8_A A SKI2-TYPE HELICASE 35.4 3.4
2vsx_B B ATP-DEPENDENT RNA HELICASE EIF4A 35.0 3.6
2vso_B B ATP-DEPENDENT RNA HELICASE EIF4A 35.0 3.6
2vsx_A A ATP-DEPENDENT RNA HELICASE EIF4A 35.0 3.6
2vso_A A ATP-DEPENDENT RNA HELICASE EIF4A 35.0 3.6
2gxs_A A heat resistant RNA dependent ATPase 34.3 3.7
2gxu_A A heat resistant RNA dependent ATPase 34.3 3.7
2gxs_B B heat resistant RNA dependent ATPase 34.3 3.7
2gxq_A A heat resistant RNA dependent ATPase 34.3 3.7
7dnj_D D Interferon-induced helicase C domain-containing protein 1 34.3 3.9
7dnj_C C Interferon-induced helicase C domain-containing protein 1 34.3 3.9
7dnj_B B Interferon-induced helicase C domain-containing protein 1 34.3 3.9
7dnj_A A Interferon-induced helicase C domain-containing protein 1 34.3 3.9
7dni_H D Interferon-induced helicase C domain-containing protein 1 34.3 3.9
7dni_G C Interferon-induced helicase C domain-containing protein 1 34.3 3.9
3nbf_B B Heat resistant RNA dependent ATPase 34.3 4.0
3nbf_C C Heat resistant RNA dependent ATPase 34.3 4.0
3mwj_A A Heat resistant RNA dependent ATPase 34.3 4.0
3nbf_A A Heat resistant RNA dependent ATPase 34.3 4.0
3mwk_B B Heat resistant RNA dependent ATPase 34.3 4.0
3mwl_A A Heat resistant RNA dependent ATPase 34.3 4.0
3mwk_A A Heat resistant RNA dependent ATPase 34.3 4.0
3mwj_B B Heat resistant RNA dependent ATPase 34.3 4.0
3mwl_B B Heat resistant RNA dependent ATPase 34.3 4.0
8r08_GA G Probable ATP-dependent RNA helicase DDX23 35.0 4.3
5tnu_A A DNA-dependent ATPase XPBII 35.0 4.4
6p4o_C C DNA-dependent ATPase XPBII 35.0 4.4
6p4o_A A DNA-dependent ATPase XPBII 35.0 4.4
6p4o_E E DNA-dependent ATPase XPBII 35.0 4.6
6p4f_C C DNA-dependent ATPase XPBII 34.7 4.7
8dpe_A A ATP-dependent RNA helicase DDX42 34.7 4.7
6p4w_C C DNA-dependent ATPase XPBII 34.7 4.8
6p4f_A A DNA-dependent ATPase XPBII 34.7 4.8
6p4w_A A DNA-dependent ATPase XPBII 34.7 4.8
8q7w_F E Probable ATP-dependent RNA helicase DDX23 35.0 5.0
2iwh_B B ELONGATION FACTOR 3A 35.0 5.0
7b7d_DC EF Elongation factor 3A 35.0 5.0
5tnu_B B DNA-dependent ATPase XPBII 34.7 5.0
2iw3_B B ELONGATION FACTOR 3A 35.0 5.1
2ix3_B B ELONGATION FACTOR 3 35.0 5.1
2ix3_A A ELONGATION FACTOR 3 35.0 5.1
2iwh_A A ELONGATION FACTOR 3A 35.0 5.1
2ix8_A A ELONGATION FACTOR 3A 35.0 5.2
2iw3_A A ELONGATION FACTOR 3A 35.0 5.2
6uv0_A A Probable ATP-dependent RNA helicase DDX17 34.7 5.9
8q7x_F E Probable ATP-dependent RNA helicase DDX23 34.7 6.0
8h6j_FA 4U Probable ATP-dependent RNA helicase DDX23 34.7 6.0
6qw6_X 5X Probable ATP-dependent RNA helicase DDX23 34.7 6.3
6qx9_AA 5X Probable ATP-dependent RNA helicase DDX23 34.7 6.3
8i9y_G CE RNA helicase 34.3 6.8
8i9x_G CE RNA helicase 34.3 6.8
8rc0_E D Probable ATP-dependent RNA helicase DDX23 34.7 6.8
6yvh_H K Eukaryotic initiation factor 4A-III 33.1 6.9
8i9z_G CE RNA helicase 34.3 7.1
8i9p_F CE RNA helicase 34.3 7.1
8i9t_G CE RNA helicase 34.3 7.1
8ia0_G CE RNA helicase 34.3 7.1
8i9w_F CE RNA helicase 34.3 7.1
8i9r_F CE RNA helicase 34.3 7.1
8i9v_G CE RNA helicase 34.3 7.1
8qxd_V G Probable ATP-dependent RNA helicase DDX23 34.3 7.2
7evn_E E ATP-dependent RNA helicase DDX42 34.7 7.3
8bic_A A methyltransferase Plu4891 33.9 7.3
7pru_B B Putative iron-sulfur protein 34.3 7.3
7pru_A A Putative iron-sulfur protein 34.3 7.3
2hjv_A A ATP-dependent RNA helicase dbpA 33.1 7.7
2fwr_B B DNA repair protein RAD25 34.3 7.7
7pqx_B B Putative iron-sulfur protein 34.3 7.8
7psd_A B Putative iron-sulfur protein 34.3 7.8
7pro_B B Putative iron-sulfur protein 34.3 7.8
7pro_A A Putative iron-sulfur protein 34.3 7.8
7pqx_A A Putative iron-sulfur protein 34.3 7.8
7psd_B A Putative iron-sulfur protein 34.3 7.8
4nho_A A Probable ATP-dependent RNA helicase DDX23 34.3 7.8
8bic_B B methyltransferase Plu4891 33.9 7.9
7pr1_A A Putative iron-sulfur protein 34.3 8.0
7pr1_B B Putative iron-sulfur protein 34.3 8.0
2fwr_D D DNA repair protein RAD25 34.3 8.0
2fwr_C C DNA repair protein RAD25 34.3 8.0
2hjv_B B ATP-dependent RNA helicase dbpA 33.1 8.0
3ear_A A Hera 33.1 8.9
2zu6_D D Eukaryotic initiation factor 4A-I 33.9 9.5
>8dvs_A A Antiviral innate immune response receptor RIG-I
Length=925
Score = 1420 bits (3677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 682/682 (100%), Positives = 682/682 (100%), Gaps = 0/682 (0%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI
Sbjct 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI
Sbjct 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT
Sbjct 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR
Sbjct 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL
Sbjct 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV
Sbjct 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI
Sbjct 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720
LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN
Sbjct 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720
Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI
Sbjct 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE
Sbjct 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG
Sbjct 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
Query 901 VQTLYSKWKDFHFEKIPFDPAE 922
VQTLYSKWKDFHFEKIPFDPAE
Sbjct 901 VQTLYSKWKDFHFEKIPFDPAE 922
>7to0_A A Antiviral innate immune response receptor RIG-I
Length=925
Score = 1420 bits (3677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 682/682 (100%), Positives = 682/682 (100%), Gaps = 0/682 (0%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI
Sbjct 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI
Sbjct 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT
Sbjct 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR
Sbjct 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL
Sbjct 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV
Sbjct 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI
Sbjct 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720
LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN
Sbjct 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720
Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI
Sbjct 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE
Sbjct 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG
Sbjct 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
Query 901 VQTLYSKWKDFHFEKIPFDPAE 922
VQTLYSKWKDFHFEKIPFDPAE
Sbjct 901 VQTLYSKWKDFHFEKIPFDPAE 922
>7tnz_A A Antiviral innate immune response receptor RIG-I
Length=925
Score = 1417 bits (3669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/682 (99%), Positives = 680/682 (99%), Gaps = 0/682 (0%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI
Sbjct 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI
Sbjct 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT
Sbjct 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR
Sbjct 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL
Sbjct 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV
Sbjct 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI
Sbjct 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720
LTGRGKTNQNTGMTLPAQKCILDAFK GDHNILIATSVADEGIDIAQCNLVILYEYVGN
Sbjct 661 LTGRGKTNQNTGMTLPAQKCILDAFKXXGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720
Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI
Sbjct 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE
Sbjct 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG
Sbjct 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
Query 901 VQTLYSKWKDFHFEKIPFDPAE 922
VQTLYSKWKDFHFEKIPFDPAE
Sbjct 901 VQTLYSKWKDFHFEKIPFDPAE 922
>5f9f_I I Probable ATP-dependent RNA helicase DDX58
Length=695
Score = 1402 bits (3630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 674/683 (99%), Positives = 674/683 (99%), Gaps = 0/683 (0%)
Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299
PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ
Sbjct 10 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 69
Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT
Sbjct 70 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 129
Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN
Sbjct 130 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 189
Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479
TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM
Sbjct 190 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 249
Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539
RDTESLAKRICKDLE REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF
Sbjct 250 RDTESLAKRICKDLEXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 309
Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599
LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES
Sbjct 310 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 369
Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659
VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG
Sbjct 370 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 429
Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719
ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG
Sbjct 430 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 489
Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779
NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK
Sbjct 490 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 549
Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839
ILHIQTHEKFIRDSQE KPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK
Sbjct 550 ILHIQTHEKFIRDSQEXXKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 609
Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899
ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT
Sbjct 610 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 669
Query 900 GVQTLYSKWKDFHFEKIPFDPAE 922
GVQTLYSKWKDFHFEKIPFDPAE
Sbjct 670 GVQTLYSKWKDFHFEKIPFDPAE 692
>5f9f_A A Probable ATP-dependent RNA helicase DDX58
Length=695
Score = 1402 bits (3628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 673/683 (99%), Positives = 673/683 (99%), Gaps = 0/683 (0%)
Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299
PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ
Sbjct 10 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 69
Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT
Sbjct 70 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 129
Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN
Sbjct 130 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 189
Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479
TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM
Sbjct 190 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 249
Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539
RDTESLAKRICKDL REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF
Sbjct 250 RDTESLAKRICKDLXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 309
Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599
LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES
Sbjct 310 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 369
Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659
VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG
Sbjct 370 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 429
Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719
ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG
Sbjct 430 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 489
Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779
NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK
Sbjct 490 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 549
Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839
ILHIQTHEKFIRDSQ PKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK
Sbjct 550 ILHIQTHEKFIRDSQXXPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 609
Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899
ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT
Sbjct 610 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 669
Query 900 GVQTLYSKWKDFHFEKIPFDPAE 922
GVQTLYSKWKDFHFEKIPFDPAE
Sbjct 670 GVQTLYSKWKDFHFEKIPFDPAE 692
>6kyv_F F Probable ATP-dependent RNA helicase DDX58
Length=684
Score = 1399 bits (3620), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 672/677 (99%), Positives = 672/677 (99%), Gaps = 0/677 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP
Sbjct 4 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 63
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP
Sbjct 64 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 123
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD
Sbjct 124 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 183
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD
Sbjct 184 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 243
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY
Sbjct 244 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 303
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRA DEIEQDLTQRFEEKLQELESVS
Sbjct 304 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAXXXDEIEQDLTQRFEEKLQELESVS 363
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL
Sbjct 364 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 423
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV
Sbjct 424 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 483
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL
Sbjct 484 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 543
Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841
HIQTHEKFIRDSQ PKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC
Sbjct 544 HIQTHEKFIRDSQXXPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 603
Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901
FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV
Sbjct 604 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 663
Query 902 QTLYSKWKDFHFEKIPF 918
QTLYSKWKDFHFEKIPF
Sbjct 664 QTLYSKWKDFHFEKIPF 680
>6kyv_H H Probable ATP-dependent RNA helicase DDX58
Length=684
Score = 1399 bits (3620), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 672/677 (99%), Positives = 672/677 (99%), Gaps = 0/677 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP
Sbjct 4 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 63
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP
Sbjct 64 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 123
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD
Sbjct 124 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 183
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD
Sbjct 184 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 243
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY
Sbjct 244 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 303
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRA DEIEQDLTQRFEEKLQELESVS
Sbjct 304 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAXXXDEIEQDLTQRFEEKLQELESVS 363
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL
Sbjct 364 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 423
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV
Sbjct 424 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 483
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL
Sbjct 484 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 543
Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841
HIQTHEKFIRDSQ PKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC
Sbjct 544 HIQTHEKFIRDSQXXPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 603
Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901
FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV
Sbjct 604 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 663
Query 902 QTLYSKWKDFHFEKIPF 918
QTLYSKWKDFHFEKIPF
Sbjct 664 QTLYSKWKDFHFEKIPF 680
>6kyv_B B Probable ATP-dependent RNA helicase DDX58
Length=684
Score = 1399 bits (3620), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 672/677 (99%), Positives = 672/677 (99%), Gaps = 0/677 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP
Sbjct 4 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 63
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP
Sbjct 64 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 123
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD
Sbjct 124 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 183
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD
Sbjct 184 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 243
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY
Sbjct 244 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 303
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRA DEIEQDLTQRFEEKLQELESVS
Sbjct 304 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAXXXDEIEQDLTQRFEEKLQELESVS 363
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL
Sbjct 364 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 423
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV
Sbjct 424 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 483
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL
Sbjct 484 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 543
Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841
HIQTHEKFIRDSQ PKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC
Sbjct 544 HIQTHEKFIRDSQXXPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 603
Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901
FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV
Sbjct 604 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 663
Query 902 QTLYSKWKDFHFEKIPF 918
QTLYSKWKDFHFEKIPF
Sbjct 664 QTLYSKWKDFHFEKIPF 680
>6kyv_L L Probable ATP-dependent RNA helicase DDX58
Length=684
Score = 1399 bits (3620), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 672/677 (99%), Positives = 672/677 (99%), Gaps = 0/677 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP
Sbjct 4 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 63
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP
Sbjct 64 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 123
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD
Sbjct 124 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 183
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD
Sbjct 184 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 243
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY
Sbjct 244 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 303
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRA DEIEQDLTQRFEEKLQELESVS
Sbjct 304 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAXXXDEIEQDLTQRFEEKLQELESVS 363
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL
Sbjct 364 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 423
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV
Sbjct 424 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 483
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL
Sbjct 484 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 543
Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841
HIQTHEKFIRDSQ PKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC
Sbjct 544 HIQTHEKFIRDSQXXPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 603
Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901
FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV
Sbjct 604 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 663
Query 902 QTLYSKWKDFHFEKIPF 918
QTLYSKWKDFHFEKIPF
Sbjct 664 QTLYSKWKDFHFEKIPF 680
>6kyv_J J Probable ATP-dependent RNA helicase DDX58
Length=684
Score = 1399 bits (3620), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 672/677 (99%), Positives = 672/677 (99%), Gaps = 0/677 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP
Sbjct 4 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 63
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP
Sbjct 64 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 123
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD
Sbjct 124 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 183
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD
Sbjct 184 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 243
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY
Sbjct 244 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 303
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRA DEIEQDLTQRFEEKLQELESVS
Sbjct 304 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAXXXDEIEQDLTQRFEEKLQELESVS 363
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL
Sbjct 364 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 423
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV
Sbjct 424 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 483
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL
Sbjct 484 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 543
Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841
HIQTHEKFIRDSQ PKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC
Sbjct 544 HIQTHEKFIRDSQXXPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 603
Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901
FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV
Sbjct 604 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 663
Query 902 QTLYSKWKDFHFEKIPF 918
QTLYSKWKDFHFEKIPF
Sbjct 664 QTLYSKWKDFHFEKIPF 680
>6kyv_D D Probable ATP-dependent RNA helicase DDX58
Length=684
Score = 1399 bits (3620), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 672/677 (99%), Positives = 672/677 (99%), Gaps = 0/677 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP
Sbjct 4 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 63
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP
Sbjct 64 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 123
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD
Sbjct 124 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 183
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD
Sbjct 184 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 243
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY
Sbjct 244 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 303
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRA DEIEQDLTQRFEEKLQELESVS
Sbjct 304 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAXXXDEIEQDLTQRFEEKLQELESVS 363
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL
Sbjct 364 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 423
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV
Sbjct 424 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 483
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL
Sbjct 484 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 543
Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841
HIQTHEKFIRDSQ PKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC
Sbjct 544 HIQTHEKFIRDSQXXPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 603
Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901
FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV
Sbjct 604 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 663
Query 902 QTLYSKWKDFHFEKIPF 918
QTLYSKWKDFHFEKIPF
Sbjct 664 QTLYSKWKDFHFEKIPF 680
>5f9f_E E Probable ATP-dependent RNA helicase DDX58
Length=695
Score = 1398 bits (3619), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 672/681 (99%), Positives = 672/681 (99%), Gaps = 0/681 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP
Sbjct 12 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 71
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP
Sbjct 72 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 131
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD
Sbjct 132 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 191
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD
Sbjct 192 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 251
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TESLAKRICKD REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY
Sbjct 252 TESLAKRICKDXXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 311
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS
Sbjct 312 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 371
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL
Sbjct 372 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 431
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV
Sbjct 432 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 491
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL
Sbjct 492 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 551
Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841
HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC
Sbjct 552 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 611
Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901
FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV
Sbjct 612 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 671
Query 902 QTLYSKWKDFHFEKIPFDPAE 922
QTLYSKWKDFHFEKIPFDPAE
Sbjct 672 QTLYSKWKDFHFEKIPFDPAE 692
>5f9f_K K Probable ATP-dependent RNA helicase DDX58
Length=695
Score = 1397 bits (3617), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 672/682 (99%), Positives = 672/682 (99%), Gaps = 0/682 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP
Sbjct 12 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 71
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP
Sbjct 72 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 131
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD
Sbjct 132 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 191
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD
Sbjct 192 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 251
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TESLAKRICKDL REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY
Sbjct 252 TESLAKRICKDLXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 311
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS
Sbjct 312 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 371
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL
Sbjct 372 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 431
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV
Sbjct 432 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 491
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL
Sbjct 492 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 551
Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841
HIQTHEKFIRDSQEK PVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC
Sbjct 552 HIQTHEKFIRDSQEKXXPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 611
Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901
FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV
Sbjct 612 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 671
Query 902 QTLYSKWKDFHFEKIPFDPAEM 923
QTLYSKWKDFHFEKIPFDPAEM
Sbjct 672 QTLYSKWKDFHFEKIPFDPAEM 693
>5f9f_G G Probable ATP-dependent RNA helicase DDX58
Length=695
Score = 1391 bits (3601), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 669/683 (98%), Positives = 669/683 (98%), Gaps = 0/683 (0%)
Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299
PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ
Sbjct 10 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 69
Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT
Sbjct 70 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 129
Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN
Sbjct 130 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 189
Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479
TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM
Sbjct 190 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 249
Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539
RDTESLAKRICK REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF
Sbjct 250 RDTESLAKRICKXXXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 309
Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599
LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES
Sbjct 310 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 369
Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659
VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG
Sbjct 370 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 429
Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719
ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG
Sbjct 430 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 489
Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779
NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK
Sbjct 490 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 549
Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839
ILHIQTHEKFIRDSQ PVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK
Sbjct 550 ILHIQTHEKFIRDSQXXXXPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 609
Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899
ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT
Sbjct 610 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 669
Query 900 GVQTLYSKWKDFHFEKIPFDPAE 922
GVQTLYSKWKDFHFEKIPFDPAE
Sbjct 670 GVQTLYSKWKDFHFEKIPFDPAE 692
>7to2_A A Antiviral innate immune response receptor RIG-I
Length=925
Score = 1391 bits (3601), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 670/682 (98%), Positives = 670/682 (98%), Gaps = 0/682 (0%)
Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299
PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ
Sbjct 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299
Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT
Sbjct 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN
Sbjct 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479
TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM
Sbjct 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479
Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539
RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF
Sbjct 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539
Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599
LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES
Sbjct 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599
Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659
VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG
Sbjct 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659
Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719
ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG
Sbjct 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719
Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779
NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK
Sbjct 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779
Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839
ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK
Sbjct 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839
Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899
ECFVSR KRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT
Sbjct 840 ECFVSRXXXXXXXXXXXXKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899
Query 900 GVQTLYSKWKDFHFEKIPFDPA 921
GVQTLYSKWKDFHFEKIPFDPA
Sbjct 900 GVQTLYSKWKDFHFEKIPFDPA 921
>5f9f_C C Probable ATP-dependent RNA helicase DDX58
Length=695
Score = 1389 bits (3596), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 668/682 (98%), Positives = 668/682 (98%), Gaps = 0/682 (0%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI
Sbjct 11 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 70
Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI
Sbjct 71 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 130
Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT
Sbjct 131 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 190
Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR
Sbjct 191 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 250
Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
DTESLAKRICKD EFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL
Sbjct 251 DTESLAKRICKDXXXXXXXXXXEFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 310
Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV
Sbjct 311 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 370
Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI
Sbjct 371 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 430
Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720
LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN
Sbjct 431 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 490
Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI
Sbjct 491 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 550
Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
LHIQTHEKFIRDSQ PVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE
Sbjct 551 LHIQTHEKFIRDSQXXXXPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 610
Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG
Sbjct 611 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 670
Query 901 VQTLYSKWKDFHFEKIPFDPAE 922
VQTLYSKWKDFHFEKIPFDPAE
Sbjct 671 VQTLYSKWKDFHFEKIPFDPAE 692
>8dvu_A A Antiviral innate immune response receptor RIG-I
Length=925
Score = 1389 bits (3595), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 669/682 (98%), Positives = 669/682 (98%), Gaps = 0/682 (0%)
Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299
PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ
Sbjct 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299
Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT
Sbjct 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN
Sbjct 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479
TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM
Sbjct 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479
Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539
RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF
Sbjct 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539
Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599
LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES
Sbjct 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599
Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659
VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG
Sbjct 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659
Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719
ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG
Sbjct 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719
Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779
NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK
Sbjct 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779
Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839
ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK
Sbjct 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839
Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899
ECFVSR RAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT
Sbjct 840 ECFVSRXXXXXXXXXXXXXRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899
Query 900 GVQTLYSKWKDFHFEKIPFDPA 921
GVQTLYSKWKDFHFEKIPFDPA
Sbjct 900 GVQTLYSKWKDFHFEKIPFDPA 921
>7tny_A A Antiviral innate immune response receptor RIG-I
Length=925
Score = 1382 bits (3578), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 666/682 (98%), Positives = 666/682 (98%), Gaps = 0/682 (0%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI
Sbjct 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI
Sbjct 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT
Sbjct 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR
Sbjct 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL
Sbjct 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV
Sbjct 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI
Sbjct 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720
LTGRG MTLPAQKCILDAFK DHNILIATSV IAQCNLVILYEYVGN
Sbjct 661 LTGRGXXXXXXXMTLPAQKCILDAFKXXXDHNILIATSVXXXXXXIAQCNLVILYEYVGN 720
Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI
Sbjct 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE
Sbjct 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG
Sbjct 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
Query 901 VQTLYSKWKDFHFEKIPFDPAE 922
VQTLYSKWKDFHFEKIPFDPAE
Sbjct 901 VQTLYSKWKDFHFEKIPFDPAE 922
>7jl1_A A Antiviral innate immune response receptor RIG-I
Length=722
Score = 1358 bits (3515), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 656/680 (96%), Positives = 656/680 (96%), Gaps = 0/680 (0%)
Query 239 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN 298
SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN
Sbjct 36 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN 95
Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358
QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG
Sbjct 96 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 155
Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418
TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGG GPLPQVIGLTASVGVGDAK
Sbjct 156 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGXXGPLPQVIGLTASVGVGDAK 215
Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 478
NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL
Sbjct 216 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 275
Query 479 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL 538
MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMP KDEESRICKAL
Sbjct 276 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPXKDEESRICKAL 335
Query 539 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE 598
FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNV EIEQDLTQRFEEKLQELE
Sbjct 336 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVXXXXXXEIEQDLTQRFEEKLQELE 395
Query 599 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP 658
SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP
Sbjct 396 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP 455
Query 659 GILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYV 718
GILTGRGKTNQNTGMTLPAQKCILDAFK GDHNILIATSVADEGIDIAQCNLVILYEYV
Sbjct 456 GILTGRGKTNQNTGMTLPAQKCILDAFKXXGDHNILIATSVADEGIDIAQCNLVILYEYV 515
Query 719 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE 778
GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE
Sbjct 516 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE 575
Query 779 KILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF 838
KILHIQTHEKFIRDSQEK ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF
Sbjct 576 KILHIQTHEKFIRDSQEKXXXXXXXENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF 635
Query 839 KECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA 898
KECFVSRPHPKPK KRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA
Sbjct 636 KECFVSRPHPKPKXXXXXXKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA 695
Query 899 TGVQTLYSKWKDFHFEKIPF 918
TGVQTLYSKWKDFHFEKIPF
Sbjct 696 TGVQTLYSKWKDFHFEKIPF 715
>5f9h_G G Probable ATP-dependent RNA helicase DDX58
Length=695
Score = 1350 bits (3494), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 653/683 (96%), Positives = 653/683 (96%), Gaps = 0/683 (0%)
Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299
PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ
Sbjct 10 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 69
Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT
Sbjct 70 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 129
Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN
Sbjct 130 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 189
Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479
TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM
Sbjct 190 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 249
Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539
RDTESLAKRICK REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF
Sbjct 250 RDTESLAKRICKXXXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 309
Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599
LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES
Sbjct 310 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 369
Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659
VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG
Sbjct 370 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 429
Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719
ILTGR ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG
Sbjct 430 ILTGRXXXXXXXXXXXXXXXXILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 489
Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779
NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK
Sbjct 490 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 549
Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839
ILHIQTHEKFIRDS KPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK
Sbjct 550 ILHIQTHEKFIRDSXXXXKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 609
Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899
ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT
Sbjct 610 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 669
Query 900 GVQTLYSKWKDFHFEKIPFDPAE 922
GVQTLYSKWKDFHFEKIPFDPAE
Sbjct 670 GVQTLYSKWKDFHFEKIPFDPAE 692
>5f98_A A Probable ATP-dependent RNA helicase DDX58
Length=695
Score = 1343 bits (3477), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/683 (95%), Positives = 650/683 (95%), Gaps = 0/683 (0%)
Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299
PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ
Sbjct 10 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 69
Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT
Sbjct 70 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 129
Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN
Sbjct 130 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 189
Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479
TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM
Sbjct 190 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 249
Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539
RDTESLAKRICKDL REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF
Sbjct 250 RDTESLAKRICKDLXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 309
Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599
LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES
Sbjct 310 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 369
Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659
VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG
Sbjct 370 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 429
Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719
ILTGR DHNILIATSVADEGIDIAQCNLVILYEYVG
Sbjct 430 ILTGRXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVADEGIDIAQCNLVILYEYVG 489
Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779
NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK
Sbjct 490 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 549
Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839
ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK
Sbjct 550 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 609
Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899
ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT
Sbjct 610 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 669
Query 900 GVQTLYSKWKDFHFEKIPFDPAE 922
GVQTLYSKWKDFHFEKIPFDPAE
Sbjct 670 GVQTLYSKWKDFHFEKIPFDPAE 692
>7jl3_A A Antiviral innate immune response receptor RIG-I
Length=722
Score = 1343 bits (3476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/680 (96%), Positives = 650/680 (96%), Gaps = 0/680 (0%)
Query 239 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN 298
SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN
Sbjct 36 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN 95
Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358
QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG
Sbjct 96 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 155
Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418
TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGG GPLPQVIGLTASVGVGDAK
Sbjct 156 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGXXGPLPQVIGLTASVGVGDAK 215
Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 478
NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL
Sbjct 216 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 275
Query 479 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL 538
MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMP KDEESRICKAL
Sbjct 276 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPXKDEESRICKAL 335
Query 539 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE 598
FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNV EIEQDLTQRFEEKLQELE
Sbjct 336 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVXXXXXXEIEQDLTQRFEEKLQELE 395
Query 599 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP 658
SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP
Sbjct 396 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP 455
Query 659 GILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYV 718
GILTGRG GMTLPAQKCILDAFK GDHNILIATSVADEGIDIAQCNLVILYEYV
Sbjct 456 GILTGRGXXXXXXGMTLPAQKCILDAFKXXGDHNILIATSVADEGIDIAQCNLVILYEYV 515
Query 719 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE 778
GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE
Sbjct 516 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE 575
Query 779 KILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF 838
KILHIQTHEKFIRDSQEK ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF
Sbjct 576 KILHIQTHEKFIRDSQEKXXXXXXXENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF 635
Query 839 KECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA 898
KECFVSRPHPKPK KRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA
Sbjct 636 KECFVSRPHPKPKXXXXXXKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA 695
Query 899 TGVQTLYSKWKDFHFEKIPF 918
TGVQTLYSKWKDFHFEKIPF
Sbjct 696 TGVQTLYSKWKDFHFEKIPF 715
>7jl3_C C Antiviral innate immune response receptor RIG-I
Length=722
Score = 1343 bits (3476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/680 (96%), Positives = 650/680 (96%), Gaps = 0/680 (0%)
Query 239 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN 298
SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN
Sbjct 36 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN 95
Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358
QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG
Sbjct 96 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 155
Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418
TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGG GPLPQVIGLTASVGVGDAK
Sbjct 156 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGXXGPLPQVIGLTASVGVGDAK 215
Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 478
NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL
Sbjct 216 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 275
Query 479 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL 538
MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMP KDEESRICKAL
Sbjct 276 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPXKDEESRICKAL 335
Query 539 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE 598
FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNV EIEQDLTQRFEEKLQELE
Sbjct 336 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVXXXXXXEIEQDLTQRFEEKLQELE 395
Query 599 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP 658
SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP
Sbjct 396 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP 455
Query 659 GILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYV 718
GILTGRG GMTLPAQKCILDAFK GDHNILIATSVADEGIDIAQCNLVILYEYV
Sbjct 456 GILTGRGXXXXXXGMTLPAQKCILDAFKXXGDHNILIATSVADEGIDIAQCNLVILYEYV 515
Query 719 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE 778
GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE
Sbjct 516 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE 575
Query 779 KILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF 838
KILHIQTHEKFIRDSQEK ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF
Sbjct 576 KILHIQTHEKFIRDSQEKXXXXXXXENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF 635
Query 839 KECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA 898
KECFVSRPHPKPK KRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA
Sbjct 636 KECFVSRPHPKPKXXXXXXKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA 695
Query 899 TGVQTLYSKWKDFHFEKIPF 918
TGVQTLYSKWKDFHFEKIPF
Sbjct 696 TGVQTLYSKWKDFHFEKIPF 715
>7jl3_E E Antiviral innate immune response receptor RIG-I
Length=722
Score = 1343 bits (3476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/680 (96%), Positives = 650/680 (96%), Gaps = 0/680 (0%)
Query 239 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN 298
SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN
Sbjct 36 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN 95
Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358
QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG
Sbjct 96 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 155
Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418
TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGG GPLPQVIGLTASVGVGDAK
Sbjct 156 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGXXGPLPQVIGLTASVGVGDAK 215
Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 478
NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL
Sbjct 216 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 275
Query 479 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL 538
MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMP KDEESRICKAL
Sbjct 276 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPXKDEESRICKAL 335
Query 539 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE 598
FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNV EIEQDLTQRFEEKLQELE
Sbjct 336 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVXXXXXXEIEQDLTQRFEEKLQELE 395
Query 599 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP 658
SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP
Sbjct 396 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP 455
Query 659 GILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYV 718
GILTGRG GMTLPAQKCILDAFK GDHNILIATSVADEGIDIAQCNLVILYEYV
Sbjct 456 GILTGRGXXXXXXGMTLPAQKCILDAFKXXGDHNILIATSVADEGIDIAQCNLVILYEYV 515
Query 719 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE 778
GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE
Sbjct 516 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE 575
Query 779 KILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF 838
KILHIQTHEKFIRDSQEK ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF
Sbjct 576 KILHIQTHEKFIRDSQEKXXXXXXXENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF 635
Query 839 KECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA 898
KECFVSRPHPKPK KRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA
Sbjct 636 KECFVSRPHPKPKXXXXXXKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA 695
Query 899 TGVQTLYSKWKDFHFEKIPF 918
TGVQTLYSKWKDFHFEKIPF
Sbjct 696 TGVQTLYSKWKDFHFEKIPF 715
>6gpg_C A Probable ATP-dependent RNA helicase DDX58
Length=714
Score = 1341 bits (3471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/684 (95%), Positives = 650/684 (95%), Gaps = 0/684 (0%)
Query 239 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN 298
SPFKPRNYQLELALPAMKGKNTIICAPTG GKTFVSLLICEHHLKKFPQGQKGKVVFFAN
Sbjct 28 SPFKPRNYQLELALPAMKGKNTIICAPTGFGKTFVSLLICEHHLKKFPQGQKGKVVFFAN 87
Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358
QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG
Sbjct 88 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 147
Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418
TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK
Sbjct 148 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 207
Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 478
NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL
Sbjct 208 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 267
Query 479 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL 538
MRDTESLAKRICKDL NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL
Sbjct 268 MRDTESLAKRICKDLXXXXXXXNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL 327
Query 539 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE 598
FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE
Sbjct 328 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE 387
Query 599 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP 658
SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP
Sbjct 388 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP 447
Query 659 GILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYV 718
GILTG DHNILIATSVADEGIDIAQCNLVILYEYV
Sbjct 448 GILTGXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVADEGIDIAQCNLVILYEYV 507
Query 719 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE 778
GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE
Sbjct 508 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE 567
Query 779 KILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF 838
KILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF
Sbjct 568 KILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF 627
Query 839 KECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA 898
KECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA
Sbjct 628 KECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA 687
Query 899 TGVQTLYSKWKDFHFEKIPFDPAE 922
TGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 688 TGVQTLYSKWKDFHFEKIPFDPAE 711
>5f98_C C Probable ATP-dependent RNA helicase DDX58
Length=695
Score = 1340 bits (3467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 648/683 (95%), Positives = 648/683 (95%), Gaps = 0/683 (0%)
Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299
PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ
Sbjct 10 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 69
Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT
Sbjct 70 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 129
Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN
Sbjct 130 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 189
Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479
TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRI DKFKYIIAQLM
Sbjct 190 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIXDKFKYIIAQLM 249
Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539
RDTESLAKRICKDL REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF
Sbjct 250 RDTESLAKRICKDLXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 309
Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599
LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES
Sbjct 310 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 369
Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659
VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG
Sbjct 370 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 429
Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719
ILTG DHNILIATSVADEGIDIAQCNLVILYEYVG
Sbjct 430 ILTGXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVADEGIDIAQCNLVILYEYVG 489
Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779
NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK
Sbjct 490 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 549
Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839
ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK
Sbjct 550 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 609
Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899
ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT
Sbjct 610 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 669
Query 900 GVQTLYSKWKDFHFEKIPFDPAE 922
GVQTLYSKWKDFHFEKIPFDPAE
Sbjct 670 GVQTLYSKWKDFHFEKIPFDPAE 692
>5f98_G G Probable ATP-dependent RNA helicase DDX58
Length=695
Score = 1337 bits (3460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 647/683 (95%), Positives = 647/683 (95%), Gaps = 0/683 (0%)
Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299
PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ
Sbjct 10 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 69
Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT
Sbjct 70 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 129
Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN
Sbjct 130 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 189
Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479
TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM
Sbjct 190 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 249
Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539
RDTESLAKRICKDL REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF
Sbjct 250 RDTESLAKRICKDLXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 309
Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599
LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES
Sbjct 310 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 369
Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659
VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG
Sbjct 370 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 429
Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719
ILTGR DHNILIATSVADEGIDIAQCNLVILYEYVG
Sbjct 430 ILTGRXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVADEGIDIAQCNLVILYEYVG 489
Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779
NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK
Sbjct 490 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 549
Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839
ILHIQTHEKFIRDSQE PVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK
Sbjct 550 ILHIQTHEKFIRDSQEXXXPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 609
Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899
ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT
Sbjct 610 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 669
Query 900 GVQTLYSKWKDFHFEKIPFDPAE 922
GVQTLYSKWKDFHFEKIPFDPAE
Sbjct 670 GVQTLYSKWKDFHFEKIPFDPAE 692
>5f98_I I Probable ATP-dependent RNA helicase DDX58
Length=695
Score = 1337 bits (3459), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 647/683 (95%), Positives = 647/683 (95%), Gaps = 0/683 (0%)
Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299
PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ
Sbjct 10 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 69
Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT
Sbjct 70 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 129
Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN
Sbjct 130 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 189
Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479
TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM
Sbjct 190 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 249
Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539
RDTESLAKRICKDLEN NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF
Sbjct 250 RDTESLAKRICKDLENXXXXXNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 309
Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599
LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES
Sbjct 310 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 369
Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659
VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG
Sbjct 370 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 429
Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719
ILT DHNILIATSVADEGIDIAQCNLVILYEYVG
Sbjct 430 ILTXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVADEGIDIAQCNLVILYEYVG 489
Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779
NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK
Sbjct 490 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 549
Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839
ILHIQTHEKFIRDSQ PVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK
Sbjct 550 ILHIQTHEKFIRDSQXXXXPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 609
Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899
ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT
Sbjct 610 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 669
Query 900 GVQTLYSKWKDFHFEKIPFDPAE 922
GVQTLYSKWKDFHFEKIPFDPAE
Sbjct 670 GVQTLYSKWKDFHFEKIPFDPAE 692
>5f9h_C C Probable ATP-dependent RNA helicase DDX58
Length=695
Score = 1336 bits (3457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 647/682 (95%), Positives = 647/682 (95%), Gaps = 0/682 (0%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI
Sbjct 11 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 70
Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI
Sbjct 71 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 130
Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT
Sbjct 131 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 190
Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR
Sbjct 191 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 250
Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
DTESLAKRICKD REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL
Sbjct 251 DTESLAKRICKDXXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 310
Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV
Sbjct 311 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 370
Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI
Sbjct 371 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 430
Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720
LTGRGK ASGDHNILIATSVADEGIDIAQCNLVILYEYVGN
Sbjct 431 LTGRGKXXXXXXXXXXXXXXXXXXXXASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 490
Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI
Sbjct 491 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 550
Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
LHIQTHEKFIRDS VPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE
Sbjct 551 LHIQTHEKFIRDSXXXXXXVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 610
Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG
Sbjct 611 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 670
Query 901 VQTLYSKWKDFHFEKIPFDPAE 922
VQTLYSKWKDFHFEKIPFDPAE
Sbjct 671 VQTLYSKWKDFHFEKIPFDPAE 692
>7tnx_A A Antiviral innate immune response receptor RIG-I
Length=925
Score = 1333 bits (3451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 647/683 (95%), Positives = 647/683 (95%), Gaps = 0/683 (0%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI
Sbjct 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI
Sbjct 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT
Sbjct 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR
Sbjct 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL
Sbjct 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV
Sbjct 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI
Sbjct 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720
LT DHNILIATSV IAQCNLVILYEYV
Sbjct 661 LTXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXIAQCNLVILYEYVXX 720
Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI
Sbjct 721 XIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE
Sbjct 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG
Sbjct 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
Query 901 VQTLYSKWKDFHFEKIPFDPAEM 923
VQTLYSKWKDFHFEKIPFDPAEM
Sbjct 901 VQTLYSKWKDFHFEKIPFDPAEM 923
>8g7v_A A Antiviral innate immune response receptor RIG-I
Length=925
Score = 1333 bits (3451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 647/683 (95%), Positives = 647/683 (95%), Gaps = 0/683 (0%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI
Sbjct 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI
Sbjct 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT
Sbjct 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR
Sbjct 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL
Sbjct 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV
Sbjct 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI
Sbjct 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720
LT DHNILIATSV IAQCNLVILYEYV
Sbjct 661 LTXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXIAQCNLVILYEYVXX 720
Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI
Sbjct 721 XIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE
Sbjct 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG
Sbjct 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
Query 901 VQTLYSKWKDFHFEKIPFDPAEM 923
VQTLYSKWKDFHFEKIPFDPAEM
Sbjct 901 VQTLYSKWKDFHFEKIPFDPAEM 923
>8g7u_A A Antiviral innate immune response receptor RIG-I
Length=925
Score = 1333 bits (3451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 647/683 (95%), Positives = 647/683 (95%), Gaps = 0/683 (0%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI
Sbjct 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI
Sbjct 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT
Sbjct 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR
Sbjct 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL
Sbjct 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV
Sbjct 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI
Sbjct 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720
LT DHNILIATSV IAQCNLVILYEYV
Sbjct 661 LTXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXIAQCNLVILYEYVXX 720
Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI
Sbjct 721 XIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE
Sbjct 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG
Sbjct 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
Query 901 VQTLYSKWKDFHFEKIPFDPAEM 923
VQTLYSKWKDFHFEKIPFDPAEM
Sbjct 901 VQTLYSKWKDFHFEKIPFDPAEM 923
>8g7t_A A Antiviral innate immune response receptor RIG-I
Length=925
Score = 1333 bits (3451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 647/683 (95%), Positives = 647/683 (95%), Gaps = 0/683 (0%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI
Sbjct 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI
Sbjct 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT
Sbjct 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR
Sbjct 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL
Sbjct 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV
Sbjct 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI
Sbjct 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720
LT DHNILIATSV IAQCNLVILYEYV
Sbjct 661 LTXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXIAQCNLVILYEYVXX 720
Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI
Sbjct 721 XIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE
Sbjct 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG
Sbjct 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
Query 901 VQTLYSKWKDFHFEKIPFDPAEM 923
VQTLYSKWKDFHFEKIPFDPAEM
Sbjct 901 VQTLYSKWKDFHFEKIPFDPAEM 923
>5f9h_A A Probable ATP-dependent RNA helicase DDX58
Length=695
Score = 1333 bits (3450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 646/682 (95%), Positives = 646/682 (95%), Gaps = 0/682 (0%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI
Sbjct 11 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 70
Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI
Sbjct 71 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 130
Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT
Sbjct 131 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 190
Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR
Sbjct 191 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 250
Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
DTESLAKRICKDL REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL
Sbjct 251 DTESLAKRICKDLXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 310
Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAA FDEIEQDLTQRFEEKLQELESV
Sbjct 311 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAXFDEIEQDLTQRFEEKLQELESV 370
Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI
Sbjct 371 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 430
Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720
LTGR DHNILIATSVADEGIDIAQCNLVILYEYVGN
Sbjct 431 LTGRXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVADEGIDIAQCNLVILYEYVGN 490
Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI
Sbjct 491 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 550
Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
LHIQTHEKFIRDSQ PKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE
Sbjct 551 LHIQTHEKFIRDSQXXPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 610
Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG
Sbjct 611 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 670
Query 901 VQTLYSKWKDFHFEKIPFDPAE 922
VQTLYSKWKDFHFEKIPFDPAE
Sbjct 671 VQTLYSKWKDFHFEKIPFDPAE 692
>5f9h_I I Probable ATP-dependent RNA helicase DDX58
Length=695
Score = 1330 bits (3443), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 644/684 (94%), Positives = 644/684 (94%), Gaps = 0/684 (0%)
Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299
PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ
Sbjct 10 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 69
Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT
Sbjct 70 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 129
Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGG GPLPQVIGLTASVGVGDAKN
Sbjct 130 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGXXGPLPQVIGLTASVGVGDAKN 189
Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479
TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRI DKFKYIIAQLM
Sbjct 190 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIXDKFKYIIAQLM 249
Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539
RDTESLAKRICKD EFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF
Sbjct 250 RDTESLAKRICKDXXXXXXXXXXEFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 309
Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599
LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAA FDEIEQDLTQRFEEKLQELES
Sbjct 310 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAXFDEIEQDLTQRFEEKLQELES 369
Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659
VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG
Sbjct 370 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 429
Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719
ILTGRG GDHNILIATSVADEGIDIAQCNLVILYEYVG
Sbjct 430 ILTGRGXXXXXXXXXXXXXXXXXXXXXXXGDHNILIATSVADEGIDIAQCNLVILYEYVG 489
Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779
NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK
Sbjct 490 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 549
Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839
ILHIQTHEKFIRDSQ KPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK
Sbjct 550 ILHIQTHEKFIRDSQXXXKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 609
Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899
ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT
Sbjct 610 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 669
Query 900 GVQTLYSKWKDFHFEKIPFDPAEM 923
GVQTLYSKWKDFHFEKIPFDPAEM
Sbjct 670 GVQTLYSKWKDFHFEKIPFDPAEM 693
>5f98_K K Probable ATP-dependent RNA helicase DDX58
Length=695
Score = 1329 bits (3439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 644/682 (94%), Positives = 644/682 (94%), Gaps = 0/682 (0%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI
Sbjct 11 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 70
Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI
Sbjct 71 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 130
Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT
Sbjct 131 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 190
Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR
Sbjct 191 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 250
Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
DTESLAKRICKDL NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL
Sbjct 251 DTESLAKRICKDLXXXXXXXNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 310
Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVR EIEQDLTQRFEEKLQELESV
Sbjct 311 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRXXXXXEIEQDLTQRFEEKLQELESV 370
Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI
Sbjct 371 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 430
Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720
LTGR DHNILIATSVADEGIDIAQCNLVILYEYVGN
Sbjct 431 LTGRXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVADEGIDIAQCNLVILYEYVGN 490
Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI
Sbjct 491 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 550
Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
LHIQTHEKFIRDSQEKP PVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE
Sbjct 551 LHIQTHEKFIRDSQEKPXPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 610
Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG
Sbjct 611 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 670
Query 901 VQTLYSKWKDFHFEKIPFDPAE 922
VQTLYSKWKDFHFEKIPFDPAE
Sbjct 671 VQTLYSKWKDFHFEKIPFDPAE 692
>5e3h_A A Probable ATP-dependent RNA helicase DDX58
Length=695
Score = 1325 bits (3428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/682 (94%), Positives = 642/682 (94%), Gaps = 0/682 (0%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI
Sbjct 11 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 70
Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI
Sbjct 71 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 130
Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT
Sbjct 131 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 190
Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR
Sbjct 191 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 250
Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
DTESLAKRICKDLE FGTQKYEQWIVTVQKACMVF DKDEESRICKALFL
Sbjct 251 DTESLAKRICKDLEXXXXXXXXXFGTQKYEQWIVTVQKACMVFXXXDKDEESRICKALFL 310
Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRA EIEQDLTQRFEEKLQELESV
Sbjct 311 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAXXXXEIEQDLTQRFEEKLQELESV 370
Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI
Sbjct 371 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 430
Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720
LTGRG TGMTLPAQKCILDAFK DHNILIATSVADEGIDIAQCNLVILYEYVGN
Sbjct 431 LTGRGXXXXXTGMTLPAQKCILDAFKXXXDHNILIATSVADEGIDIAQCNLVILYEYVGN 490
Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI
Sbjct 491 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 550
Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
LHIQTHEKFIRDSQE VPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE
Sbjct 551 LHIQTHEKFIRDSQEXXXXVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 610
Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
CFVSRPHPKPKQFSSFEKRAKIFCAR CSHDWGIHVKYKTFEIPVIKIESF
Sbjct 611 CFVSRPHPKPKQFSSFEKRAKIFCARXXCSHDWGIHVKYKTFEIPVIKIESFXXXXXXXX 670
Query 901 VQTLYSKWKDFHFEKIPFDPAE 922
TLYSKWKDFHFEKIPFDPAE
Sbjct 671 XXTLYSKWKDFHFEKIPFDPAE 692
>5f98_E E Probable ATP-dependent RNA helicase DDX58
Length=695
Score = 1321 bits (3418), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 641/681 (94%), Positives = 641/681 (94%), Gaps = 0/681 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP
Sbjct 12 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 71
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP
Sbjct 72 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 131
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD
Sbjct 132 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 191
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRI DKFKYIIAQLMRD
Sbjct 192 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIXDKFKYIIAQLMRD 251
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TESLAKRICK REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY
Sbjct 252 TESLAKRICKXXXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 311
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRA FDEIEQDLTQRFEEKLQELESVS
Sbjct 312 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAXXFDEIEQDLTQRFEEKLQELESVS 371
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL
Sbjct 372 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 431
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
T DHNILIATSVADEGIDIAQCNLVILYEYVGNV
Sbjct 432 TXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVADEGIDIAQCNLVILYEYVGNV 491
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL
Sbjct 492 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 551
Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841
HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC
Sbjct 552 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 611
Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901
FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV
Sbjct 612 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 671
Query 902 QTLYSKWKDFHFEKIPFDPAE 922
QTLYSKWKDFHFEKIPFDPAE
Sbjct 672 QTLYSKWKDFHFEKIPFDPAE 692
>5f9h_E E Probable ATP-dependent RNA helicase DDX58
Length=695
Score = 1313 bits (3398), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 638/681 (94%), Positives = 638/681 (94%), Gaps = 0/681 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP
Sbjct 12 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 71
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP
Sbjct 72 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 131
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD
Sbjct 132 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 191
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRI DKFKYIIAQLMRD
Sbjct 192 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIXDKFKYIIAQLMRD 251
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TESLAKRIC REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY
Sbjct 252 TESLAKRICXXXXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 311
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
TSHLRKYNDALIISEHARMKDALDYLKDFFSNV FDEIEQDLTQRFEEKLQELESVS
Sbjct 312 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVXXXXFDEIEQDLTQRFEEKLQELESVS 371
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL
Sbjct 372 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 431
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
TG GDHNILIATSVADEGIDIAQCNLVILYEYVGNV
Sbjct 432 TGXXXXXXXXXXXXXXXXXXXXXXXXXGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 491
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL
Sbjct 492 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 551
Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841
HIQTHEKFIRDSQE PKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC
Sbjct 552 HIQTHEKFIRDSQEXPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 611
Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901
FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT V
Sbjct 612 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATXV 671
Query 902 QTLYSKWKDFHFEKIPFDPAE 922
QTLYSKWKDFHFEKIPFDPAE
Sbjct 672 QTLYSKWKDFHFEKIPFDPAE 692
>5f9h_K K Probable ATP-dependent RNA helicase DDX58
Length=695
Score = 1310 bits (3390), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 637/681 (94%), Positives = 637/681 (94%), Gaps = 0/681 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP
Sbjct 12 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 71
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP
Sbjct 72 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 131
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD
Sbjct 132 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 191
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRI DKFKYIIAQLMRD
Sbjct 192 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIXDKFKYIIAQLMRD 251
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TESLAKRI REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY
Sbjct 252 TESLAKRIXXXXXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 311
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAA DEIEQDLTQRFEEKLQELESVS
Sbjct 312 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAXXDEIEQDLTQRFEEKLQELESVS 371
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL
Sbjct 372 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 431
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
TG DHNILIATSVADEGIDIAQCNLVILYEYVGNV
Sbjct 432 TGXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVADEGIDIAQCNLVILYEYVGNV 491
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL
Sbjct 492 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 551
Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841
HIQTHEKFIRDSQ KPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC
Sbjct 552 HIQTHEKFIRDSQXXXKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 611
Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901
FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV
Sbjct 612 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 671
Query 902 QTLYSKWKDFHFEKIPFDPAE 922
QTLYSKWKDFHFEKIPFDPAE
Sbjct 672 QTLYSKWKDFHFEKIPFDPAE 692
>8sd0_A A Antiviral innate immune response receptor RIG-I
Length=925
Score = 1306 bits (3380), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 636/682 (93%), Positives = 636/682 (93%), Gaps = 0/682 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP
Sbjct 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP
Sbjct 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD
Sbjct 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD
Sbjct 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY
Sbjct 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS
Sbjct 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL
Sbjct 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
DHNILIATSV AQCNLVILYEYVGNV
Sbjct 662 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXXAQCNLVILYEYVGNV 721
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
IK GSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL
Sbjct 722 IKXXXXXXXXXXXGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841
HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC
Sbjct 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841
Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901
FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV
Sbjct 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901
Query 902 QTLYSKWKDFHFEKIPFDPAEM 923
QTLYSKWKDFHFEKIPFDPAEM
Sbjct 902 QTLYSKWKDFHFEKIPFDPAEM 923
>8scz_A A Antiviral innate immune response receptor RIG-I
Length=887
Score = 1304 bits (3374), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/682 (93%), Positives = 635/682 (93%), Gaps = 0/682 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP
Sbjct 204 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 263
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP
Sbjct 264 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 323
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD
Sbjct 324 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 383
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD
Sbjct 384 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 443
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY
Sbjct 444 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 503
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS
Sbjct 504 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 563
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL
Sbjct 564 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 623
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
DHNILIATSV AQCNLVILYEYV
Sbjct 624 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXXAQCNLVILYEYVXXX 683
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
GRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL
Sbjct 684 XXXXXXXXXGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 743
Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841
HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC
Sbjct 744 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 803
Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901
FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV
Sbjct 804 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 863
Query 902 QTLYSKWKDFHFEKIPFDPAEM 923
QTLYSKWKDFHFEKIPFDPAEM
Sbjct 864 QTLYSKWKDFHFEKIPFDPAEM 885
>8dvr_A A Antiviral innate immune response receptor RIG-I
Length=925
Score = 1304 bits (3374), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/682 (93%), Positives = 635/682 (93%), Gaps = 0/682 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP
Sbjct 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP
Sbjct 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD
Sbjct 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD
Sbjct 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY
Sbjct 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS
Sbjct 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL
Sbjct 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
DHNILIATSV AQCNLVILYEYV
Sbjct 662 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXXAQCNLVILYEYVXXX 721
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
GRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL
Sbjct 722 XXXXXXXXXGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841
HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC
Sbjct 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841
Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901
FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV
Sbjct 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901
Query 902 QTLYSKWKDFHFEKIPFDPAEM 923
QTLYSKWKDFHFEKIPFDPAEM
Sbjct 902 QTLYSKWKDFHFEKIPFDPAEM 923
>7to1_A A Antiviral innate immune response receptor RIG-I
Length=925
Score = 1304 bits (3374), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/682 (93%), Positives = 635/682 (93%), Gaps = 0/682 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP
Sbjct 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP
Sbjct 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD
Sbjct 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD
Sbjct 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY
Sbjct 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS
Sbjct 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL
Sbjct 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
DHNILIATSV AQCNLVILYEYV
Sbjct 662 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXXAQCNLVILYEYVXXX 721
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
GRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL
Sbjct 722 XXXXXXXXXGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841
HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC
Sbjct 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841
Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901
FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV
Sbjct 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901
Query 902 QTLYSKWKDFHFEKIPFDPAEM 923
QTLYSKWKDFHFEKIPFDPAEM
Sbjct 902 QTLYSKWKDFHFEKIPFDPAEM 923
>2ykg_A A PROBABLE ATP-DEPENDENT RNA HELICASE DDX58
Length=696
Score = 1297 bits (3357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 633/687 (92%), Positives = 634/687 (92%), Gaps = 0/687 (0%)
Query 236 NLYSPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVF 295
NLYS KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVF
Sbjct 7 NLYSXXKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVF 66
Query 296 FANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL 355
FANQIPVYEQ KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL
Sbjct 67 FANQIPVYEQNKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL 126
Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 415
KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG
Sbjct 127 KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 186
Query 416 DAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII 475
DAK TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII
Sbjct 187 DAKTTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII 246
Query 476 AQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRIC 535
AQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMV DEESRIC
Sbjct 247 AQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVXXXXXXDEESRIC 306
Query 536 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 595
KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ
Sbjct 307 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 366
Query 596 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 655
ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF
Sbjct 367 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 426
Query 656 LKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILY 715
LKPGI DHNILIATSVADEG AQCNLVILY
Sbjct 427 LKPGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVADEGXXXAQCNLVILY 486
Query 716 EYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV 775
EYV VIKM RGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV
Sbjct 487 EYVXXVIKMXXXXXXXXXRGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV 546
Query 776 FREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLG 835
FREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIE+CHYTVLG
Sbjct 547 FREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEDCHYTVLG 606
Query 836 DAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVE 895
DAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVE
Sbjct 607 DAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVE 666
Query 896 DIATGVQTLYSKWKDFHFEKIPFDPAE 922
DIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 667 DIATGVQTLYSKWKDFHFEKIPFDPAE 693
>8g7u_C C Antiviral innate immune response receptor RIG-I
Length=925
Score = 1295 bits (3351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/683 (92%), Positives = 631/683 (92%), Gaps = 0/683 (0%)
Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299
PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ
Sbjct 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299
Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT
Sbjct 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN
Sbjct 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479
TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM
Sbjct 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479
Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539
RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF
Sbjct 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539
Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599
LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES
Sbjct 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599
Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659
VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG
Sbjct 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659
Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719
IL DHNILIATSV CNLVILYEYV
Sbjct 660 ILXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXXXXCNLVILYEYVX 719
Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779
RGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK
Sbjct 720 XXXXXXXXXXXXXXRGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779
Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839
ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK
Sbjct 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839
Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899
ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT
Sbjct 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899
Query 900 GVQTLYSKWKDFHFEKIPFDPAE 922
GVQTLYSKWKDFHFEKIPFDPAE
Sbjct 900 GVQTLYSKWKDFHFEKIPFDPAE 922
>3zd6_A A PROBABLE ATP-DEPENDENT RNA HELICASE DDX58
Length=696
Score = 1290 bits (3338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 629/686 (92%), Positives = 629/686 (92%), Gaps = 0/686 (0%)
Query 236 NLYSPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVF 295
NLYSPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFP GQKGKVVF
Sbjct 7 NLYSPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPNGQKGKVVF 66
Query 296 FANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL 355
FANQIPVYEQ KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL
Sbjct 67 FANQIPVYEQNKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL 126
Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 415
KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG
Sbjct 127 KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 186
Query 416 DAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII 475
DAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII
Sbjct 187 DAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII 246
Query 476 AQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRIC 535
AQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACM SRIC
Sbjct 247 AQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMXXXXXXXXXXSRIC 306
Query 536 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 595
KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ
Sbjct 307 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 366
Query 596 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 655
ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF
Sbjct 367 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 426
Query 656 LKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILY 715
LKPGIL HNILI TSVAD AQCNLVILY
Sbjct 427 LKPGILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNILILTSVADXXXXXAQCNLVILY 486
Query 716 EYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV 775
EYVGNVI ARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV
Sbjct 487 EYVGNVIXXXXXXXXXXARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV 546
Query 776 FREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLG 835
FREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLG
Sbjct 547 FREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLG 606
Query 836 DAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVE 895
DAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVE
Sbjct 607 DAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVE 666
Query 896 DIATGVQTLYSKWKDFHFEKIPFDPA 921
DIATGVQTLYSKWKDFHFEKIPFDPA
Sbjct 667 DIATGVQTLYSKWKDFHFEKIPFDPA 692
>4bpb_A A PROBABLE ATP-DEPENDENT RNA HELICASE DDX58
Length=698
Score = 1288 bits (3334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/688 (92%), Positives = 632/688 (92%), Gaps = 2/688 (0%)
Query 236 NLYSPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVF 295
NLYSPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVF
Sbjct 7 NLYSPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVF 66
Query 296 FANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL 355
FANQIPVYEQ KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL
Sbjct 67 FANQIPVYEQNKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL 126
Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 415
KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG
Sbjct 127 KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 186
Query 416 DAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII 475
DAK TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII
Sbjct 187 DAKTTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII 246
Query 476 AQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRIC 535
AQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMV DEESRIC
Sbjct 247 AQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVXXXXXXDEESRIC 306
Query 536 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 595
KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ
Sbjct 307 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 366
Query 596 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 655
ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF
Sbjct 367 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 426
Query 656 LKPGI--LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVI 713
LKPGI HNILIATSVAD AQCNLVI
Sbjct 427 LKPGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNILIATSVADXXXXXAQCNLVI 486
Query 714 LYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDE 773
LYEYV VIKM RGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDE
Sbjct 487 LYEYVXXVIKMXXXXXXXXXRGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDE 546
Query 774 AVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTV 833
AVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIE+CHYTV
Sbjct 547 AVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEDCHYTV 606
Query 834 LGDAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFV 893
LGDAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFV
Sbjct 607 LGDAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFV 666
Query 894 VEDIATGVQTLYSKWKDFHFEKIPFDPA 921
VEDIATGVQTLYSKWKDFHFEKIPFDPA
Sbjct 667 VEDIATGVQTLYSKWKDFHFEKIPFDPA 694
>4ay2_A A PROBABLE ATP-DEPENDENT RNA HELICASE DDX58
Length=687
Score = 1281 bits (3316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/683 (92%), Positives = 627/683 (92%), Gaps = 0/683 (0%)
Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299
PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ
Sbjct 2 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 61
Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
IPVYEQ KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT
Sbjct 62 IPVYEQNKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 121
Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN
Sbjct 122 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 181
Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479
TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM
Sbjct 182 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 241
Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539
RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMV EESRICKALF
Sbjct 242 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVXXXXXXXEESRICKALF 301
Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599
LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES
Sbjct 302 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 361
Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659
VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG
Sbjct 362 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 421
Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719
IL GDHNILIATSVADE AQCNLVILYEYV
Sbjct 422 ILXXXXXXXXXXXXXXXXXXXXXXXXXXXGDHNILIATSVADEXXXXAQCNLVILYEYVX 481
Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779
SKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK
Sbjct 482 XXXXXXXXXXXXXXXXSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 541
Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839
ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIE+CHYTVLGDAFK
Sbjct 542 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEDCHYTVLGDAFK 601
Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899
ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT
Sbjct 602 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 661
Query 900 GVQTLYSKWKDFHFEKIPFDPAE 922
GVQTLYSKWKDFHFEKIPFDPAE
Sbjct 662 GVQTLYSKWKDFHFEKIPFDPAE 684
>3zd7_A A PROBABLE ATP-DEPENDENT RNA HELICASE DDX58
Length=696
Score = 1263 bits (3267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/687 (90%), Positives = 620/687 (90%), Gaps = 0/687 (0%)
Query 236 NLYSPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVF 295
NLYSPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVF
Sbjct 7 NLYSPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVF 66
Query 296 FANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL 355
FANQIPVYEQ KSVFSKYFERHGYRVTGISGATA VPVEQIVENNDIIILTPQILVNNL
Sbjct 67 FANQIPVYEQNKSVFSKYFERHGYRVTGISGATAXXVPVEQIVENNDIIILTPQILVNNL 126
Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 415
KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG
Sbjct 127 KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 186
Query 416 DAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII 475
DAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII
Sbjct 187 DAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII 246
Query 476 AQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRIC 535
AQLMRDTESLAKRICKDLENLSQ QNREFGTQKYEQWIVTVQKACM SRIC
Sbjct 247 AQLMRDTESLAKRICKDLENLSQSQNREFGTQKYEQWIVTVQKACMXXXXXXXXXXSRIC 306
Query 536 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 595
KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ
Sbjct 307 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 366
Query 596 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 655
ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF
Sbjct 367 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 426
Query 656 LKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILY 715
LKPGILT NILI TSVADEGIDIAQCNLVILY
Sbjct 427 LKPGILTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNILILTSVADEGIDIAQCNLVILY 486
Query 716 EYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV 775
EYVGN ARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV
Sbjct 487 EYVGNXXXXXXXXXXXXARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV 546
Query 776 FREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLG 835
FREKILHIQTHEKFIRDS KENKKLLCRKCKALACYTADVRVIE+CHYTVLG
Sbjct 547 FREKILHIQTHEKFIRDSXXXXXXXXXKENKKLLCRKCKALACYTADVRVIEDCHYTVLG 606
Query 836 DAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVE 895
DAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVE
Sbjct 607 DAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVE 666
Query 896 DIATGVQTLYSKWKDFHFEKIPFDPAE 922
D TGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 667 DXXTGVQTLYSKWKDFHFEKIPFDPAE 693
>8g7v_C C Antiviral innate immune response receptor RIG-I
Length=925
Score = 1262 bits (3265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 618/682 (91%), Positives = 618/682 (91%), Gaps = 0/682 (0%)
Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299
PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ
Sbjct 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299
Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT
Sbjct 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN
Sbjct 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479
TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM
Sbjct 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479
Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539
RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF
Sbjct 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539
Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599
LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES
Sbjct 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599
Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659
VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG
Sbjct 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659
Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719
IL DHNILIATSV CNLVILYEYV
Sbjct 660 ILXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXXXXCNLVILYEYVX 719
Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779
RGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK
Sbjct 720 XXXXXXXXXXXXXXRGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779
Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839
ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK
Sbjct 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839
Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899
ECFVSR KRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT
Sbjct 840 ECFVSRXXXXXXXXXXXXKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899
Query 900 GVQTLYSKWKDFHFEKIPFDPA 921
GVQTLYSKWKDFHFEKIPFDPA
Sbjct 900 GVQTLYSKWKDFHFEKIPFDPA 921
>8g7t_C C Antiviral innate immune response receptor RIG-I
Length=925
Score = 1257 bits (3253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 616/681 (90%), Positives = 616/681 (90%), Gaps = 0/681 (0%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI
Sbjct 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI
Sbjct 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT
Sbjct 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR
Sbjct 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL
Sbjct 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV
Sbjct 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP
Sbjct 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPXX 660
Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720
HNILIATSV NLVILYEYV
Sbjct 661 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNILIATSVXXXXXXXXXXNLVILYEYVXX 720
Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
SKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI
Sbjct 721 XXXXXXXXXXXXXXXSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
LHIQTHEKFIRDS VPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE
Sbjct 781 LHIQTHEKFIRDSXXXXXXVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840
Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG
Sbjct 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900
Query 901 VQTLYSKWKDFHFEKIPFDPA 921
VQTLYSKWKDFHFEKIPFDPA
Sbjct 901 VQTLYSKWKDFHFEKIPFDPA 921
>4on9_A A Probable ATP-dependent RNA helicase DDX58
Length=580
Score = 1049 bits (2713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/552 (93%), Positives = 514/552 (93%), Gaps = 0/552 (0%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI
Sbjct 28 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 87
Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360
PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI
Sbjct 88 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 147
Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420
PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT
Sbjct 148 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 207
Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480
DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR
Sbjct 208 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 267
Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540
DTESLAKRICKDLE SQIQNREFGTQKYEQWIVTVQKACMV KDEESRICKALFL
Sbjct 268 DTESLAKRICKDLEXXSQIQNREFGTQKYEQWIVTVQKACMVXXXXXKDEESRICKALFL 327
Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600
YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV
Sbjct 328 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 387
Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660
SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI
Sbjct 388 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 447
Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720
L FKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN
Sbjct 448 LXXXXXXXXXXXXXXXXXXXXXXXFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 507
Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780
VIKMIQ GSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI
Sbjct 508 VIKMIQXXXXXXXXGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 567
Query 781 LHIQTHEKFIRD 792
LHIQTHEKFIRD
Sbjct 568 LHIQTHEKFIRD 579
>4on9_B B Probable ATP-dependent RNA helicase DDX58
Length=580
Score = 1006 bits (2600), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/552 (90%), Positives = 495/552 (90%), Gaps = 0/552 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFP KGKVVFFANQIP
Sbjct 29 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPXXXKGKVVFFANQIP 88
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQKSVFSKYFERHGYRVTGISG NVPVEQIVENNDIIILTPQILVNNLKKGTIP
Sbjct 89 VYEQQKSVFSKYFERHGYRVTGISGXXXXNVPVEQIVENNDIIILTPQILVNNLKKGTIP 148
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLG SGPLPQVIGLTASVGVGDAKNTD
Sbjct 149 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGXXSGPLPQVIGLTASVGVGDAKNTD 208
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD
Sbjct 209 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 268
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY
Sbjct 269 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 328
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS
Sbjct 329 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 388
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI
Sbjct 389 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIX 448
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
SGDHNILIAT IAQCNLVILYEYVGNV
Sbjct 449 XXXXXXXXXXXXXXXXXXXXXXXXXXSGDHNILIATXXXXXXXXIAQCNLVILYEYVGNV 508
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
GSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL
Sbjct 509 XXXXXXXXXXXXXGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 568
Query 782 HIQTHEKFIRDS 793
HIQTHEKFIRDS
Sbjct 569 HIQTHEKFIRDS 580
>3tbk_A A RIG-I Helicase Domain
Length=599
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/555 (74%), Positives = 457/555 (82%), Gaps = 0/555 (0%)
Query 239 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN 298
SP KPRNYQLELALPA KGKNTIICAPTGCGKTFVSLLICEHHLKKFP GQKGKVVFFAN
Sbjct 1 SPLKPRNYQLELALPAKKGKNTIICAPTGCGKTFVSLLICEHHLKKFPCGQKGKVVFFAN 60
Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358
QIPVYEQQ +VFS+YFER GY + ISGAT+++V V+ I+E+NDIIILTPQILVNNL G
Sbjct 61 QIPVYEQQATVFSRYFERLGYNIASISGATSDSVSVQHIIEDNDIIILTPQILVNNLNNG 120
Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418
IPSLS+FTLMIFDECHNTSK HPYN IMF YLD KLG S PLPQV+GLTASVGVGDAK
Sbjct 121 AIPSLSVFTLMIFDECHNTSKNHPYNQIMFRYLDHKLGESRDPLPQVVGLTASVGVGDAK 180
Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 478
+EA+ +ICKLCA+LDASVIATV+ N+ ELEQVVYKPQK RKV SR S+ FK II+QL
Sbjct 181 TAEEAMQHICKLCAALDASVIATVRDNVAELEQVVYKPQKISRKVASRTSNTFKCIISQL 240
Query 479 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL 538
M++TE LAK + ++L L QIQNREFGTQKYEQWIV V KAC VFQM DK+EESR+CKAL
Sbjct 241 MKETEKLAKDVSEELGKLFQIQNREFGTQKYEQWIVGVHKACSVFQMADKEEESRVCKAL 300
Query 539 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE 598
FLYTSHLRKYNDALIISE A+M DAL+YLK FF +VR E E++LT+RFEEKL+ELE
Sbjct 301 FLYTSHLRKYNDALIISEDAQMTDALNYLKAFFHDVRXXXXXETERELTRRFEEKLEELE 360
Query 599 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP 658
VSRDPSNENPKL DL +LQEEYHL PET TILFVKTRALVDALK WIE NP LSFLKP
Sbjct 361 KVSRDPSNENPKLRDLYLVLQEEYHLKPETKTILFVKTRALVDALKKWIEENPALSFLKP 420
Query 659 GILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYV 718
GILTG D+NILIATSVADEGIDIA+CNLVILYEYV
Sbjct 421 GILTGXXXXXXXXXXXXXXXXXXXXXXXXXXDNNILIATSVADEGIDIAECNLVILYEYV 480
Query 719 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE 778
GNVIKMIQTRGRGRAR SKCFLLTS+A VIEKE+ NM KEK+MN+SILRLQTWDE F +
Sbjct 481 GNVIKMIQTRGRGRARDSKCFLLTSSADVIEKEKANMIKEKIMNESILRLQTWDEMKFGK 540
Query 779 KILHIQTHEKFIRDS 793
+ IQ +EK +RDS
Sbjct 541 TVHRIQVNEKLLRDS 555
>4a36_A A RETINOIC ACID INDUCIBLE PROTEIN I
Length=556
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/551 (57%), Positives = 404/551 (73%), Gaps = 2/551 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
K R+YQ+ELA PA+ GKN +ICAPTG GKTFVS+LICEHH + P G+K KVVF A ++P
Sbjct 7 KARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVP 66
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQK+VF +FER GY V GISG NV VE+++E++DII++TPQILVN+ + GT+
Sbjct 67 VYEQQKNVFKHHFERQGYSVQGISGENFSNVSVEKVIEDSDIIVVTPQILVNSFEDGTLT 126
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNT+ HPYN++M YL+QK +S LPQ++GLTASVGVG+AKN +
Sbjct 127 SLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKFNSAS-QLPQILGLTASVGVGNAKNIE 185
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
E +++IC LC+ LD I+TV+ N++EL++ + KP+ R V+ RI + F II+ LM +
Sbjct 186 ETIEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSE 245
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TE+L + I FGTQ YE WIV Q+ C +EESRIC+ALF+
Sbjct 246 TEALMRTI-XXXXXXXXXXXXXFGTQNYEHWIVVTQRKCRXXXXXXXEEESRICRALFIC 304
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
T HLRKYNDALIISE AR+ DAL YL +FF+NV+ + E+EQ LT +F+EK EL ++S
Sbjct 305 TEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALS 364
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
+D +NENPKLE+L IL + Y NP+T T+LF KTRALV ALK +E NP L+++KPG+L
Sbjct 365 KDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVL 424
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
GRG MTLP+QK +LDAFK S D+ +LIATSVADEGIDI QCNLV+LYEY GNV
Sbjct 425 MGRGXXXXXXXMTLPSQKGVLDAFKTSKDNRLLIATSVADEGIDIVQCNLVVLYEYSGNV 484
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
KMIQ RGRGRA GSKC L+TS V+E E+ N YKE+MMN ++ ++Q WDE F +KI
Sbjct 485 TKMIQVRGRGRAAGSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIH 544
Query 782 HIQTHEKFIRD 792
++Q E+ +RD
Sbjct 545 NLQMKERVLRD 555
>4a36_B B RETINOIC ACID INDUCIBLE PROTEIN I
Length=556
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/551 (56%), Positives = 401/551 (73%), Gaps = 2/551 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
K R+YQ+ELA PA+ GKN +ICAPTG GKTFVS+LICEHH + P G+K KVVF A ++P
Sbjct 7 KARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVP 66
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQK+VF +FER GY V GISG NV VE+++E++DII++TPQILVN+ + GT+
Sbjct 67 VYEQQKNVFKHHFERQGYSVQGISGENFSNVSVEKVIEDSDIIVVTPQILVNSFEDGTLT 126
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNT+ HPYN++M YL+QK +S LPQ++GLTASVGVG+AKN +
Sbjct 127 SLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKFNSAS-QLPQILGLTASVGVGNAKNIE 185
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
E +++IC LC+ LD I+TV+ N++EL++ + KP+ R V+ RI + F II+ LM +
Sbjct 186 ETIEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSE 245
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TE+L + I FGTQ YE WIV Q+ C SRIC+ALF+
Sbjct 246 TEALMRTI-YSXXXXXXXXXXXFGTQNYEHWIVVTQRKCRXXXXXXXXXXSRICRALFIC 304
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
T HLRKYNDALIISE AR+ DAL YL +FF+NV+ + E+EQ LT +F+EK EL ++S
Sbjct 305 TEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALS 364
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
+D +NENPKLE+L IL + Y NP+T T+LF KTRALV ALK +E NP L+++KPG+L
Sbjct 365 KDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVL 424
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
GRG MTLP+QK +LDAFK S D+ +LIATSVADEGIDI QCNLV+LYEY GNV
Sbjct 425 MGRGXXXXXXXMTLPSQKGVLDAFKTSKDNRLLIATSVADEGIDIVQCNLVVLYEYSGNV 484
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
KMIQ RGRGRA GSKC L+TS V+E E+ N YKE+MMN ++ ++Q WDE F +KI
Sbjct 485 TKMIQVRGRGRAAGSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIH 544
Query 782 HIQTHEKFIRD 792
++Q E+ +RD
Sbjct 545 NLQMKERVLRD 555
>4a2w_A A RETINOIC ACID INDUCIBLE PROTEIN I
Length=936
Score = 589 bits (1518), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 288/552 (52%), Positives = 380/552 (69%), Gaps = 2/552 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
K R+YQ+ELA PA+ GKN +ICAPTG GKTFVS+LICEHH + P G+K KVVF A ++P
Sbjct 248 KARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVP 307
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQK+VF +FER GY V GISG VE+++E++DII++TPQILVN+ + GT+
Sbjct 308 VYEQQKNVFKHHFERQGYSVQGISGEXXXXXSVEKVIEDSDIIVVTPQILVNSFEDGTLT 367
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNT+ HPYN++M YL+QK S+ LPQ++GLTASVGVG+AKN +
Sbjct 368 SLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKF-NSASQLPQILGLTASVGVGNAKNIE 426
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
E +++IC LC+ LD I+TV+ N++EL++ + KP+ R V+ RI + F II+ LM +
Sbjct 427 ETIEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSE 486
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TE+L + I +FGTQ YE WIV Q+ C + Q+ DK+EESRIC+ALF+
Sbjct 487 TEALMRTI-XXXXXXXXXXXXDFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFIC 545
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
T HLRKYNDALIISE AR+ DAL YL +FF+NV+ + E+EQ LT +F+EK EL ++S
Sbjct 546 TEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALS 605
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
+D +NENPKLE+L IL + Y NP+T T+LF KTRALV ALK +E NP L+++KPG+L
Sbjct 606 KDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVL 665
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
D+ +LIATSV I QCNLV+LYEY GNV
Sbjct 666 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDNRLLIATSVXXXXXXIVQCNLVVLYEYSGNV 725
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
KMIQ GSKC L+TS V+E E+ N YKE+MMN ++ ++Q WDE F +KI
Sbjct 726 TKMIQVXXXXXXXGSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIH 785
Query 782 HIQTHEKFIRDS 793
++Q E+ +RDS
Sbjct 786 NLQMKERVLRDS 797
Score = 170 bits (431), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/186 (47%), Positives = 125/186 (67%), Gaps = 3/186 (2%)
Query 2 TTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFL 61
T +++RSLQ ++ YI ++L+P Y+L M W +E++ ++ +G AA LFL +
Sbjct 5 TADEKRSLQCYRRYIERSLNPVYVLGNMTDWL-PDELRERIRKEEERGVSGAAALFLDAV 63
Query 62 LELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIPT 121
L+L+ GWFRG LDA+ AGY+GL EAIE+WDF K+EKLE +R LLKR++ + P
Sbjct 64 LQLEARGWFRGMLDAMLAAGYTGLAEAIENWDFSKLEKLELHRQLLKRIEATM-LEVDPV 122
Query 122 DIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKE-RN 180
+I +S CLI++ECEEI QI + AG KL+ECL RSDKE+WPK+L+LAL+
Sbjct 123 ALIPYISTCLIDRECEEIQQISENRSKAAGITKLIECLCRSDKEHWPKSLQLALDTTGYY 182
Query 181 KFSELW 186
+ SELW
Sbjct 183 RASELW 188
>4a2q_B B RETINOIC ACID INDUCIBLE PROTEIN I
Length=797
Score = 583 bits (1504), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 285/550 (52%), Positives = 377/550 (69%), Gaps = 2/550 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
K R+YQ+ELA PA+ GKN +ICAPTG GKTFVS+LICEHH + P G+K KVVF A ++P
Sbjct 248 KARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVP 307
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQK+VF +FER GY V GISG VE+++E++DII++TPQILVN+ + GT+
Sbjct 308 VYEQQKNVFKHHFERQGYSVQGISGEXXXXXSVEKVIEDSDIIVVTPQILVNSFEDGTLT 367
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNT+ HPYN++M YL+QK S+ LPQ++GLTASVGVG+AKN +
Sbjct 368 SLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKF-NSASQLPQILGLTASVGVGNAKNIE 426
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
E +++IC LC+ LD I+TV+ N++EL++ + KP+ R V+ RI + F II+ LM +
Sbjct 427 ETIEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSE 486
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TE+L + I +FGTQ YE WIV Q+ C + Q+ DK+EESRIC+ALF+
Sbjct 487 TEALMRTI-XXXXXXXXXXXXDFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFIC 545
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
T HLRKYNDALIISE AR+ DAL YL +FF+NV+ + E+EQ LT +F+EK EL ++S
Sbjct 546 TEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALS 605
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
+D +NENPKLE+L IL + Y NP+T T+LF KTRALV ALK +E NP L+++KPG+L
Sbjct 606 KDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVL 665
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
D+ +LIATSV QCNLV+LYEY GNV
Sbjct 666 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDNRLLIATSVXXXXXXXVQCNLVVLYEYSGNV 725
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
KMIQ GSKC L+TS V+E E+ N YKE+MMN ++ ++Q WDE F +KI
Sbjct 726 TKMIQVXXXXXXXGSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIH 785
Query 782 HIQTHEKFIR 791
++Q E+ +R
Sbjct 786 NLQMKERVLR 795
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 89/187 (48%), Positives = 126/187 (67%), Gaps = 3/187 (2%)
Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60
MT +++RSLQ ++ YI ++L+P Y+L M W +E++ ++ +G AA LFL
Sbjct 4 MTADEKRSLQCYRRYIERSLNPVYVLGNMTDWL-PDELRERIRKEEERGVSGAAALFLDA 62
Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120
+L+L+ GWFRG LDA+ AGY+GL EAIE+WDF K+EKLE +R LLKR++ + P
Sbjct 63 VLQLEARGWFRGMLDAMLAAGYTGLAEAIENWDFSKLEKLELHRQLLKRIEATM-LEVDP 121
Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKE-R 179
+I +S CLI++ECEEI QI + AG KL+ECL RSDKE+WPK+L+LAL+
Sbjct 122 VALIPYISTCLIDRECEEIQQISENRSKAAGITKLIECLCRSDKEHWPKSLQLALDTTGY 181
Query 180 NKFSELW 186
+ SELW
Sbjct 182 YRASELW 188
>4a2w_B B RETINOIC ACID INDUCIBLE PROTEIN I
Length=936
Score = 582 bits (1501), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 285/552 (52%), Positives = 377/552 (68%), Gaps = 2/552 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
K R+YQ+ELA PA+ GKN +ICAPTG GKTFVS+LICEHH + P G+K KVVF A ++P
Sbjct 248 KARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVP 307
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQK+VF +FER GY V GISG VE+++E++DII++TPQILVN+ + GT+
Sbjct 308 VYEQQKNVFKHHFERQGYSVQGISGEXXXXXSVEKVIEDSDIIVVTPQILVNSFEDGTLT 367
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNT+ HPYN++M YL+QK S+ LPQ++GLTASVGVG+AKN +
Sbjct 368 SLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKF-NSASQLPQILGLTASVGVGNAKNIE 426
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
E +++IC LC+ LD I+TV+ N++EL++ + KP+ R V+ RI + F II+ LM +
Sbjct 427 ETIEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSE 486
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TE+L + I +FGTQ YE WIV Q+ C + Q+ DK+EESRIC+ALF+
Sbjct 487 TEALMRTI-XXXXXXXXXXXXDFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFIC 545
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
T HLRKYNDALIISE AR+ DAL YL +FF+NV+ + E+EQ LT +F+EK EL ++S
Sbjct 546 TEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALS 605
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
+D +NENPKLE+L IL + Y NP+T T+LF KTRALV ALK +E NP L+++KPG+L
Sbjct 606 KDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVL 665
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
D+ +LIAT QCNLV+LYEY GNV
Sbjct 666 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDNRLLIATXXXXXXXXXVQCNLVVLYEYSGNV 725
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
KMIQ GSKC L+TS V+E E+ N YKE+MMN ++ ++Q WDE F +KI
Sbjct 726 TKMIQXXXXXXXXGSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIH 785
Query 782 HIQTHEKFIRDS 793
++Q E+ +RDS
Sbjct 786 NLQMKERVLRDS 797
Score = 170 bits (431), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/186 (47%), Positives = 125/186 (67%), Gaps = 3/186 (2%)
Query 2 TTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFL 61
T +++RSLQ ++ YI ++L+P Y+L M W +E++ ++ +G AA LFL +
Sbjct 5 TADEKRSLQCYRRYIERSLNPVYVLGNMTDWL-PDELRERIRKEEERGVSGAAALFLDAV 63
Query 62 LELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIPT 121
L+L+ GWFRG LDA+ AGY+GL EAIE+WDF K+EKLE +R LLKR++ + P
Sbjct 64 LQLEARGWFRGMLDAMLAAGYTGLAEAIENWDFSKLEKLELHRQLLKRIEATM-LEVDPV 122
Query 122 DIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKE-RN 180
+I +S CLI++ECEEI QI + AG KL+ECL RSDKE+WPK+L+LAL+
Sbjct 123 ALIPYISTCLIDRECEEIQQISENRSKAAGITKLIECLCRSDKEHWPKSLQLALDTTGYY 182
Query 181 KFSELW 186
+ SELW
Sbjct 183 RASELW 188
>4a2q_A A RETINOIC ACID INDUCIBLE PROTEIN I
Length=797
Score = 581 bits (1497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 284/549 (52%), Positives = 376/549 (68%), Gaps = 2/549 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
K R+YQ+ELA PA+ GKN +ICAPTG GKTFVS+LICEHH + P G+K KVVF A ++P
Sbjct 248 KARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVP 307
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQK+VF +FER GY V GISG VE+++E++DII++TPQILVN+ + GT+
Sbjct 308 VYEQQKNVFKHHFERQGYSVQGISGEXXXXXSVEKVIEDSDIIVVTPQILVNSFEDGTLT 367
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNT+ HPYN++M YL+QK S+ LPQ++GLTASVGVG+AKN +
Sbjct 368 SLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKF-NSASQLPQILGLTASVGVGNAKNIE 426
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
E +++IC LC+ LD I+TV+ N++EL++ + KP+ R V+ RI + F II+ LM +
Sbjct 427 ETIEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSE 486
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TE+L + I +FGTQ YE WIV Q+ C + Q+ DK+EESRIC+ALF+
Sbjct 487 TEALMRTI-XXXXXXXXXXXXDFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFIC 545
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
T HLRKYNDALIISE AR+ DAL YL +FF+NV+ + E+EQ LT +F+EK EL ++S
Sbjct 546 TEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALS 605
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
+D +NENPKLE+L IL + Y NP+T T+LF KTRALV ALK +E NP L+++KPG+L
Sbjct 606 KDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVL 665
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
D+ +LIATSV QCNLV+LYEY GNV
Sbjct 666 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDNRLLIATSVXXXXXXXVQCNLVVLYEYSGNV 725
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
KMIQ GSKC L+TS V+E E+ N YKE+MMN ++ ++Q WDE F +KI
Sbjct 726 TKMIQVXXXXXXXGSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIH 785
Query 782 HIQTHEKFI 790
++Q E+ +
Sbjct 786 NLQMKERVL 794
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 89/187 (48%), Positives = 126/187 (67%), Gaps = 3/187 (2%)
Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60
MT +++RSLQ ++ YI ++L+P Y+L M W +E++ ++ +G AA LFL
Sbjct 4 MTADEKRSLQCYRRYIERSLNPVYVLGNMTDWL-PDELRERIRKEEERGVSGAAALFLDA 62
Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120
+L+L+ GWFRG LDA+ AGY+GL EAIE+WDF K+EKLE +R LLKR++ + P
Sbjct 63 VLQLEARGWFRGMLDAMLAAGYTGLAEAIENWDFSKLEKLELHRQLLKRIEATM-LEVDP 121
Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKE-R 179
+I +S CLI++ECEEI QI + AG KL+ECL RSDKE+WPK+L+LAL+
Sbjct 122 VALIPYISTCLIDRECEEIQQISENRSKAAGITKLIECLCRSDKEHWPKSLQLALDTTGY 181
Query 180 NKFSELW 186
+ SELW
Sbjct 182 YRASELW 188
>4a2q_C D RETINOIC ACID INDUCIBLE PROTEIN I
Length=797
Score = 577 bits (1486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 282/549 (51%), Positives = 374/549 (68%), Gaps = 2/549 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
K R+YQ+ELA PA+ GKN +ICAPTG GKTFVS+LICEHH + P G+K KVVF A ++P
Sbjct 248 KARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVP 307
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQK+VF +FER GY V GISG VE+++E++DII++TPQILVN+ + GT+
Sbjct 308 VYEQQKNVFKHHFERQGYSVQGISGEXXXXXSVEKVIEDSDIIVVTPQILVNSFEDGTLT 367
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNT+ HPYN++M YL+QK S+ LPQ++GLTASVGVG+AKN +
Sbjct 368 SLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKF-NSASQLPQILGLTASVGVGNAKNIE 426
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
E +++IC LC+ LD I+TV+ N++EL++ + KP+ R V+ RI + F II+ LM +
Sbjct 427 ETIEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSE 486
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TE+L + I +FGTQ YE WIV Q+ C + Q+ DK+EESRIC+ALF+
Sbjct 487 TEALMRTI-XXXXXXXXXXXXDFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFIC 545
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
T HLRKYNDALIISE AR+ DAL YL +FF+NV+ + E+EQ LT +F+EK EL ++S
Sbjct 546 TEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALS 605
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
+D +NENPKLE+L IL + Y NP+T T+LF KTRALV ALK +E NP L+++KPG+L
Sbjct 606 KDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVL 665
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
D+ +LIAT QCNLV+LYEY GNV
Sbjct 666 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDNRLLIATXXXXXXXXXVQCNLVVLYEYSGNV 725
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
KMIQ GSKC L+TS V+E E+ N YKE+MMN ++ ++Q WDE F +KI
Sbjct 726 TKMIQVXXXXXXXGSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIH 785
Query 782 HIQTHEKFI 790
++Q E+ +
Sbjct 786 NLQMKERVL 794
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/186 (47%), Positives = 125/186 (67%), Gaps = 3/186 (2%)
Query 2 TTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFL 61
T +++RSLQ ++ YI ++L+P Y+L M W +E++ ++ +G AA LFL +
Sbjct 5 TADEKRSLQCYRRYIERSLNPVYVLGNMTDWL-PDELRERIRKEEERGVSGAAALFLDAV 63
Query 62 LELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIPT 121
L+L+ GWFRG LDA+ AGY+GL EAIE+WDF K+EKLE +R LLKR++ + P
Sbjct 64 LQLEARGWFRGMLDAMLAAGYTGLAEAIENWDFSKLEKLELHRQLLKRIEATM-LEVDPV 122
Query 122 DIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKE-RN 180
+I +S CLI++ECEEI QI + AG KL+ECL RSDKE+WPK+L+LAL+
Sbjct 123 ALIPYISTCLIDRECEEIQQISENRSKAAGITKLIECLCRSDKEHWPKSLQLALDTTGYY 182
Query 181 KFSELW 186
+ SELW
Sbjct 183 RASELW 188
>4a2q_D E RETINOIC ACID INDUCIBLE PROTEIN I
Length=797
Score = 576 bits (1484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 282/549 (51%), Positives = 373/549 (68%), Gaps = 2/549 (0%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
K R+YQ+ELA PA+ GKN +ICAPTG GKTFVS+LICEHH + P G+K KVVF A ++P
Sbjct 248 KARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVP 307
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VYEQQK+VF +FER GY V GISG VE+++E++DII++TPQILVN+ + GT+
Sbjct 308 VYEQQKNVFKHHFERQGYSVQGISGEXXXXXSVEKVIEDSDIIVVTPQILVNSFEDGTLT 367
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421
SLSIFTLMIFDECHNT+ HPYN++M YL+QK S+ LPQ++GLTASVGVG+AKN +
Sbjct 368 SLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKF-NSASQLPQILGLTASVGVGNAKNIE 426
Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481
E +++IC LC+ LD I+TV+ N++EL++ + KP+ R V+ RI + F II+ LM +
Sbjct 427 ETIEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSE 486
Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541
TE+L + I FGTQ YE WIV Q+ C + Q+ DK+EESRIC+ALF+
Sbjct 487 TEALMRTI-XXXXXXXXXXXXXFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFIC 545
Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601
T HLRKYNDALIISE AR+ DAL YL +FF+NV+ + E+EQ LT +F+EK EL ++S
Sbjct 546 TEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALS 605
Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661
+D +NENPKLE+L IL + Y NP+T T+LF KTRALV ALK +E NP L+++KPG+L
Sbjct 606 KDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVL 665
Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721
D+ +LIAT QCNLV+LYEY GNV
Sbjct 666 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDNRLLIATXXXXXXXXXVQCNLVVLYEYSGNV 725
Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781
KMIQ GSKC L+TS V+E E+ N YKE+MMN ++ ++Q WDE F +KI
Sbjct 726 TKMIQVXXXXXXXGSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIH 785
Query 782 HIQTHEKFI 790
++Q E+ +
Sbjct 786 NLQMKERVL 794
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/186 (47%), Positives = 125/186 (67%), Gaps = 3/186 (2%)
Query 2 TTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFL 61
T +++RSLQ ++ YI ++L+P Y+L M W +E++ ++ +G AA LFL +
Sbjct 5 TADEKRSLQCYRRYIERSLNPVYVLGNMTDWL-PDELRERIRKEEERGVSGAAALFLDAV 63
Query 62 LELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIPT 121
L+L+ GWFRG LDA+ AGY+GL EAIE+WDF K+EKLE +R LLKR++ + P
Sbjct 64 LQLEARGWFRGMLDAMLAAGYTGLAEAIENWDFSKLEKLELHRQLLKRIEATM-LEVDPV 122
Query 122 DIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKE-RN 180
+I +S CLI++ECEEI QI + AG KL+ECL RSDKE+WPK+L+LAL+
Sbjct 123 ALIPYISTCLIDRECEEIQQISENRSKAAGITKLIECLCRSDKEHWPKSLQLALDTTGYY 182
Query 181 KFSELW 186
+ SELW
Sbjct 183 RASELW 188
>4a2p_A A RETINOIC ACID INDUCIBLE PROTEIN I
Length=556
Score = 564 bits (1453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 278/549 (51%), Positives = 369/549 (67%), Gaps = 2/549 (0%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVY 303
R+YQ+ELA PA+ GKN +ICAPTG GKTFVS+LICEHH + P G+K KVVF A ++PVY
Sbjct 9 RSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPVY 68
Query 304 EQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSL 363
EQQK+VF +FER GY V GISG VE+++E++DII++TPQILVN+ + GT+ SL
Sbjct 69 EQQKNVFKHHFERQGYSVQGISGEXXXXXSVEKVIEDSDIIVVTPQILVNSFEDGTLTSL 128
Query 364 SIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEA 423
SIFTLMIFDECHNT+ HPYN++M YL+QK S LPQ++GLTASVGVG+AKN +E
Sbjct 129 SIFTLMIFDECHNTTGNHPYNVLMTRYLEQKF-NSXXXLPQILGLTASVGVGNAKNIEET 187
Query 424 LDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTE 483
+++IC LC+ LD I+TV+ N++EL++ + KP+ R V+ RI + F II+ LM +TE
Sbjct 188 IEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSETE 247
Query 484 SLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTS 543
+L + I ++FGTQ YE WIV Q+ C + DK+EESRIC+ALF+ T
Sbjct 248 ALMRTI-YSXXXXXXXXXKDFGTQNYEHWIVVTQRKCRLLXXXDKEEESRICRALFICTE 306
Query 544 HLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRD 603
HLRKYNDALIISE AR+ DAL YL +FF+NV+ + E+EQ LT +F+EK EL ++S+D
Sbjct 307 HLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALSKD 366
Query 604 PSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGILTG 663
+NENPKLE+L IL + Y NP+T T+LF KTRALV ALK +E NP L+++KPG+
Sbjct 367 ETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVXXX 426
Query 664 RGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIK 723
+ +LIATS NLV+LYEY GNV K
Sbjct 427 XXXXXXXXXXXXXXXXXXXXXXXXXXXNRLLIATSXXXXXXXXXXXNLVVLYEYSGNVTK 486
Query 724 MIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHI 783
MIQ SKC L+TS V+E E+ N YKE+MMN ++ ++Q WDE F +KI ++
Sbjct 487 MIQVXXXXXXXXSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIHNL 546
Query 784 QTHEKFIRD 792
Q E+ +RD
Sbjct 547 QMKERVLRD 555
>4nqk_D D Probable ATP-dependent RNA helicase DDX58
Length=203
Score = 388 bits (997), Expect = 2e-128, Method: Compositional matrix adjust.
Identities = 188/188 (100%), Positives = 188/188 (100%), Gaps = 0/188 (0%)
Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60
MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF
Sbjct 4 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 63
Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120
LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP
Sbjct 64 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 123
Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180
TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN
Sbjct 124 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 183
Query 181 KFSELWIV 188
KFSELWIV
Sbjct 184 KFSELWIV 191
>4nqk_C C Probable ATP-dependent RNA helicase DDX58
Length=203
Score = 388 bits (997), Expect = 2e-128, Method: Compositional matrix adjust.
Identities = 188/188 (100%), Positives = 188/188 (100%), Gaps = 0/188 (0%)
Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60
MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF
Sbjct 4 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 63
Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120
LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP
Sbjct 64 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 123
Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180
TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN
Sbjct 124 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 183
Query 181 KFSELWIV 188
KFSELWIV
Sbjct 184 KFSELWIV 191
>4nqk_B B Probable ATP-dependent RNA helicase DDX58
Length=203
Score = 388 bits (997), Expect = 2e-128, Method: Compositional matrix adjust.
Identities = 188/188 (100%), Positives = 188/188 (100%), Gaps = 0/188 (0%)
Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60
MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF
Sbjct 4 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 63
Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120
LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP
Sbjct 64 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 123
Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180
TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN
Sbjct 124 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 183
Query 181 KFSELWIV 188
KFSELWIV
Sbjct 184 KFSELWIV 191
>4nqk_A A Probable ATP-dependent RNA helicase DDX58
Length=203
Score = 388 bits (997), Expect = 2e-128, Method: Compositional matrix adjust.
Identities = 188/188 (100%), Positives = 188/188 (100%), Gaps = 0/188 (0%)
Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60
MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF
Sbjct 4 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 63
Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120
LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP
Sbjct 64 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 123
Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180
TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN
Sbjct 124 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 183
Query 181 KFSELWIV 188
KFSELWIV
Sbjct 184 KFSELWIV 191
>4p4h_F F Probable ATP-dependent RNA helicase DDX58
Length=205
Score = 388 bits (997), Expect = 2e-128, Method: Compositional matrix adjust.
Identities = 188/189 (99%), Positives = 188/189 (99%), Gaps = 0/189 (0%)
Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60
MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPM AATLFLKF
Sbjct 5 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMAAATLFLKF 64
Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120
LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP
Sbjct 65 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 124
Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180
TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN
Sbjct 125 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 184
Query 181 KFSELWIVE 189
KFSELWIVE
Sbjct 185 KFSELWIVE 193
>4p4h_G G Probable ATP-dependent RNA helicase DDX58
Length=205
Score = 388 bits (997), Expect = 2e-128, Method: Compositional matrix adjust.
Identities = 188/189 (99%), Positives = 188/189 (99%), Gaps = 0/189 (0%)
Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60
MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPM AATLFLKF
Sbjct 5 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMAAATLFLKF 64
Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120
LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP
Sbjct 65 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 124
Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180
TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN
Sbjct 125 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 184
Query 181 KFSELWIVE 189
KFSELWIVE
Sbjct 185 KFSELWIVE 193
>4p4h_B B Probable ATP-dependent RNA helicase DDX58
Length=205
Score = 388 bits (997), Expect = 2e-128, Method: Compositional matrix adjust.
Identities = 188/189 (99%), Positives = 188/189 (99%), Gaps = 0/189 (0%)
Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60
MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPM AATLFLKF
Sbjct 5 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMAAATLFLKF 64
Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120
LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP
Sbjct 65 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 124
Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180
TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN
Sbjct 125 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 184
Query 181 KFSELWIVE 189
KFSELWIVE
Sbjct 185 KFSELWIVE 193
>4p4h_C C Probable ATP-dependent RNA helicase DDX58
Length=205
Score = 388 bits (997), Expect = 2e-128, Method: Compositional matrix adjust.
Identities = 188/189 (99%), Positives = 188/189 (99%), Gaps = 0/189 (0%)
Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60
MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPM AATLFLKF
Sbjct 5 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMAAATLFLKF 64
Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120
LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP
Sbjct 65 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 124
Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180
TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN
Sbjct 125 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 184
Query 181 KFSELWIVE 189
KFSELWIVE
Sbjct 185 KFSELWIVE 193
>4p4h_E E Probable ATP-dependent RNA helicase DDX58
Length=205
Score = 386 bits (992), Expect = 1e-127, Method: Compositional matrix adjust.
Identities = 187/188 (99%), Positives = 187/188 (99%), Gaps = 0/188 (0%)
Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60
MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPM AATLFLKF
Sbjct 5 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMAAATLFLKF 64
Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120
LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP
Sbjct 65 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 124
Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180
TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN
Sbjct 125 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 184
Query 181 KFSELWIV 188
KFSELWIV
Sbjct 185 KFSELWIV 192
>4p4h_A A Probable ATP-dependent RNA helicase DDX58
Length=205
Score = 386 bits (992), Expect = 1e-127, Method: Compositional matrix adjust.
Identities = 187/188 (99%), Positives = 187/188 (99%), Gaps = 0/188 (0%)
Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60
MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPM AATLFLKF
Sbjct 5 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMAAATLFLKF 64
Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120
LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP
Sbjct 65 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 124
Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180
TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN
Sbjct 125 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 184
Query 181 KFSELWIV 188
KFSELWIV
Sbjct 185 KFSELWIV 192
>4p4h_D D Probable ATP-dependent RNA helicase DDX58
Length=205
Score = 386 bits (992), Expect = 1e-127, Method: Compositional matrix adjust.
Identities = 187/188 (99%), Positives = 187/188 (99%), Gaps = 0/188 (0%)
Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60
MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPM AATLFLKF
Sbjct 5 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMAAATLFLKF 64
Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120
LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP
Sbjct 65 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 124
Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180
TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN
Sbjct 125 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 184
Query 181 KFSELWIV 188
KFSELWIV
Sbjct 185 KFSELWIV 192
>4p4h_H H Probable ATP-dependent RNA helicase DDX58
Length=205
Score = 386 bits (992), Expect = 1e-127, Method: Compositional matrix adjust.
Identities = 187/188 (99%), Positives = 187/188 (99%), Gaps = 0/188 (0%)
Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60
MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPM AATLFLKF
Sbjct 5 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMAAATLFLKF 64
Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120
LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP
Sbjct 65 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 124
Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180
TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN
Sbjct 125 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 184
Query 181 KFSELWIV 188
KFSELWIV
Sbjct 185 KFSELWIV 192
>6g19_A A Interferon-induced helicase C domain-containing protein
1
Length=696
Score = 369 bits (948), Expect = 2e-114, Method: Compositional matrix adjust.
Identities = 247/701 (35%), Positives = 377/701 (54%), Gaps = 61/701 (9%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302
R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ +
Sbjct 4 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 63
Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358
EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G
Sbjct 64 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 122
Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408
LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL
Sbjct 123 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKXXXXAIPLPQILGL 182
Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468
TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F +
Sbjct 183 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIADDTRE 242
Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528
+ FK + ++M ++ ++ +FGTQ YEQW + ++K D
Sbjct 243 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 288
Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579
+ + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F
Sbjct 289 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNXXXXX 342
Query 580 ---DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETIT-ILFVK 635
DE ++ L F + + L+ ++ +P EN KL L + E++ + E+ I+F K
Sbjct 343 XKLDETDEFLMNLFFDNKKMLKKLAENPKYENEKLIKLRNTILEQFTRSEESSRGIIFTK 402
Query 636 TRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 693
TR AL WI N K + +K L G G +++ MT QK ++ F+ +G+ N+
Sbjct 403 TRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TGEINL 461
Query 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN-AGVIEKEQ 752
LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+TS+ +GV E+E
Sbjct 462 LIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSGSGVTEREI 521
Query 753 INMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KL 808
+N ++EKMM +I R+Q + KIL +Q EK ++ + K D + L
Sbjct 522 VNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMKVKRSIAKQYNDNPSLITL 581
Query 809 LCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPK-PKQFSSFEKRAKIFCARQ 867
LC+ C L C ++ VIE+ H+ + FK ++ R + K ++ +I C
Sbjct 582 LCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKALQKXXXXYQTNGEIIC--- 638
Query 868 NCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908
C WG + +K ++P +KI +FVV + Y KW
Sbjct 639 KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKW 679
>5jc3_A A Melanoma differentiation associated protein-5
Length=701
Score = 369 bits (947), Expect = 3e-114, Method: Compositional matrix adjust.
Identities = 239/707 (34%), Positives = 372/707 (53%), Gaps = 65/707 (9%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302
R+YQ+E+A PA+ G+N IIC PTG GKT V++ I + HL KK ++GKV+ N++P+
Sbjct 9 RDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKRKASEQGKVIVLVNKVPL 68
Query 303 YEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT--- 359
EQ F +H Y+V G+SG + + ++V+ D+II T QIL N+L T
Sbjct 69 VEQHLRKEFNPFLKHWYQVIGLSGDSELKISFPEVVKRYDVIICTAQILENSLLNATEXX 128
Query 360 -IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVIGLTA 410
LS F+L+I D+CH+T K+ YN IM YL +K+ P PQ++GLTA
Sbjct 129 ESVRLSDFSLIIIDQCHHTQKEGVYNNIMRRYLKEKIKNRKQAKEXXXLIPQPQILGLTA 188
Query 411 SVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDK 470
S GVG A++ +A ++I K+CA+LDA I TVK + +L+ V +P K + + D
Sbjct 189 SPGVGGARSNSKAEEHILKICANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDP 248
Query 471 FKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDE 530
F+ I ++M+D + + K EFG+Q YEQW++ ++ ++
Sbjct 249 FRERIIEIMQDIQKYCQLYPKS----------EFGSQPYEQWVIREERRA----AKEEKR 294
Query 531 ESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVR--------------A 576
+ R+C HL+KYNDAL I++ RM DA ++L +F+ ++
Sbjct 295 KERVC------AEHLKKYNDALQINDTIRMVDAYNHLNNFYKELKRRKTAESDDDXXXXX 348
Query 577 AGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKT 636
+ DE ++ L + F K ++L+ ++R P +N KL L L EE+ E I+F KT
Sbjct 349 SKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLMKLRNTLMEEFTKTEEPRGIIFTKT 408
Query 637 RALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNIL 694
R AL +WI NPK +K L G G ++ MT Q+ ++D F+ G N+L
Sbjct 409 RQSALALYHWIMDNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRG-GSINLL 467
Query 695 IATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL-TSNAGVIEKEQI 753
IAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+ +S +G +E+E +
Sbjct 468 IATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDV 527
Query 754 NMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKK------ 807
N+++E MM +I R+Q + KI Q I + Q K K K K
Sbjct 528 NIFRENMMYKAIRRVQEMPPEEYLNKIQDFQLQS--IVEKQMKAKRDQRKTXXKNPSLIT 585
Query 808 LLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH-PKPKQFSSFEKRAKIFCAR 866
LC+ C L C D++VIE H+ + F+ + R + ++ +I C
Sbjct 586 FLCKNCHKLICSGEDIQVIENMHHVSVKKDFQHLYHKRENXXXXXXXXXYQTNVEIIC-- 643
Query 867 QNCSHDWGIHVKYKTFEIPVIKIESFVV--EDIATGVQTLYSKWKDF 911
++C WG + Y+ ++P +KI +FVV ED + ++ KW +
Sbjct 644 KDCGQVWGNMMVYRGLDLPCLKIRNFVVAFEDXXX-TKEIFKKWGEL 689
>5jc3_D B Melanoma differentiation associated protein-5
Length=701
Score = 365 bits (938), Expect = 6e-113, Method: Compositional matrix adjust.
Identities = 235/705 (33%), Positives = 372/705 (53%), Gaps = 61/705 (9%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302
R+YQ+E+A PA+ G+N IIC PTG GKT V++ I + HL KK ++GKV+ N++P+
Sbjct 9 RDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKRKASEQGKVIVLVNKVPL 68
Query 303 YEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT--- 359
EQ F +H Y+V G+SG + + ++V+ D+II T QIL N+L T
Sbjct 69 VEQHLRKEFNPFLKHWYQVIGLSGDSELKISFPEVVKRYDVIICTAQILENSLLNATEXX 128
Query 360 -IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVIGLTA 410
LS F+L+I D+CH+T K+ YN IM YL +K+ P PQ++GLTA
Sbjct 129 ESVRLSDFSLIIIDQCHHTQKEGVYNNIMRRYLKEKIKNRKQAKEXXXLIPQPQILGLTA 188
Query 411 SVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDK 470
S GVG A++ +A ++I K+CA+LDA I TVK + +L+ V +P K + + D
Sbjct 189 SPGVGGARSNSKAEEHILKICANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDP 248
Query 471 FKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDE 530
F+ I ++M+D + + K EFG+Q YEQW++ ++ ++
Sbjct 249 FRERIIEIMQDIQKYCQLYPKS----------EFGSQPYEQWVIREERRA----AKEEKR 294
Query 531 ESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVR--------------A 576
+ R+C HL+KYNDAL I++ RM DA ++L +F+ ++
Sbjct 295 KERVC------AEHLKKYNDALQINDTIRMVDAYNHLNNFYKELKRRKTAESDDDXXXXX 348
Query 577 AGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKT 636
+ DE ++ L + F K ++L+ ++R P +N KL L L EE+ E I+F KT
Sbjct 349 SKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLMKLRNTLMEEFTKTEEPRGIIFTKT 408
Query 637 RALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNIL 694
R AL +WI NPK +K L G G ++ MT Q+ ++D F+ G N+L
Sbjct 409 RQSALALYHWIMDNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRG-GSINLL 467
Query 695 IATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL-TSNAGVIEKEQI 753
IAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+ +S +G +E+E +
Sbjct 468 IATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDV 527
Query 754 NMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KLL 809
N+++E MM +I R+Q + KI Q EK ++ +++ L
Sbjct 528 NIFRENMMYKAIRRVQEMPPEEYLNKIQDFQLQSIVEKQMKAKRDQRXXXXXXXXXITFL 587
Query 810 CRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH-PKPKQFSSFEKRAKIFCARQN 868
C+ C L C D++VIE H+ + F+ + R + ++ +I C ++
Sbjct 588 CKNCHKLICSGEDIQVIENMHHVSVKKDFQHLYHKRENXXXXXXXXXYQTNVEIIC--KD 645
Query 869 CSHDWGIHVKYKTFEIPVIKIESFVV--EDIATGVQTLYSKWKDF 911
C WG + Y+ ++P +KI +FVV ED + ++ KW +
Sbjct 646 CGQVWGNMMVYRGLDLPCLKIRNFVVAFEDXXX-TKEIFKKWGEL 689
>5jch_A A Melanoma differentiation associated protein-5
Length=701
Score = 365 bits (936), Expect = 1e-112, Method: Compositional matrix adjust.
Identities = 238/707 (34%), Positives = 370/707 (52%), Gaps = 65/707 (9%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302
R+YQ+E+A PA+ G+N IIC PTG GKT V++ I + HL KK ++GKV+ N++P+
Sbjct 9 RDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKRKASEQGKVIVLVNKVPL 68
Query 303 YEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPS 362
EQ F +H Y+V G+SG + + ++V+ D+II T QIL N+L
Sbjct 69 VEQHLRKEFNPFLKHWYQVIGLSGDSELKISFPEVVKRYDVIICTAQILENSLLNXXXXX 128
Query 363 ----LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVIGLTA 410
LS F+L+I D+CH+T K+ YN IM YL +K+ P PQ++GLTA
Sbjct 129 ESVRLSDFSLIIIDQCHHTQKEGVYNNIMRRYLKEKIKNRKQAKEXXXLIPQPQILGLTA 188
Query 411 SVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDK 470
S GVG A++ +A ++I K+CA+LDA I TVK + +L+ V +P K + + D
Sbjct 189 SPGVGGARSNSKAEEHILKICANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDP 248
Query 471 FKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDE 530
F+ I ++M+D + + K EFG+Q YEQW++ ++ ++
Sbjct 249 FRERIIEIMQDIQKYCQLYPKS----------EFGSQPYEQWVIREERRA----AKEEKR 294
Query 531 ESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVR--------------A 576
+ R+C HL+KYNDAL I++ RM DA ++L +F+ ++
Sbjct 295 KERVC------AEHLKKYNDALQINDTIRMVDAYNHLNNFYKELKRRKTAESDDXXXXXX 348
Query 577 AGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKT 636
+ DE ++ L + F K ++L+ ++R P +N KL L L EE+ E I+F KT
Sbjct 349 SKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLMKLRNTLMEEFTKTEEPRGIIFTKT 408
Query 637 RALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNIL 694
R AL +WI NPK +K L G G ++ MT Q+ ++D F+ G N+L
Sbjct 409 RQSALALYHWIMDNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRG-GSINLL 467
Query 695 IATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL-TSNAGVIEKEQI 753
IAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+ +S +G +E+E +
Sbjct 468 IATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDV 527
Query 754 NMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKK------ 807
N+++E MM +I R+Q + KI Q I + Q K K KK
Sbjct 528 NIFRENMMYKAIRRVQEMPPEEYLNKIQDFQLQS--IVEKQMKAKRDQRXXXKKNPSLIT 585
Query 808 LLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH-PKPKQFSSFEKRAKIFCAR 866
LC+ C L C D++VIE H+ + F+ + R + + +I C
Sbjct 586 FLCKNCHKLICSGEDIQVIENMHHVSVKKDFQHLYHKRENXXXXXXXXXXQTNVEIIC-- 643
Query 867 QNCSHDWGIHVKYKTFEIPVIKIESFVV--EDIATGVQTLYSKWKDF 911
++C WG + Y+ ++P +KI +FVV ED + ++ KW +
Sbjct 644 KDCGQVWGNMMVYRGLDLPCLKIRNFVVAFEDXXX-TKEIFKKWGEL 689
>5jcf_A A Melanoma differentiation associated protein-5
Length=701
Score = 364 bits (934), Expect = 3e-112, Method: Compositional matrix adjust.
Identities = 235/705 (33%), Positives = 371/705 (53%), Gaps = 61/705 (9%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302
R+YQ+E+A PA+ G+N IIC PTG GKT V++ I + HL KK ++GKV+ N++P+
Sbjct 9 RDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKRKASEQGKVIVLVNKVPL 68
Query 303 YEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT--- 359
EQ F +H Y+V G+SG + + ++V+ D+II T QIL N+L T
Sbjct 69 VEQHLRKEFNPFLKHWYQVIGLSGDSELKISFPEVVKRYDVIICTAQILENSLLNATEXX 128
Query 360 -IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVIGLTA 410
LS F+L+I D+CH+T K+ YN IM YL +K+ P PQ++GLTA
Sbjct 129 ESVRLSDFSLIIIDQCHHTQKEGVYNNIMRRYLKEKIKNRKQAKEXXXLIPQPQILGLTA 188
Query 411 SVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDK 470
S GVG A++ +A ++I K+CA+LDA I TVK + +L+ V +P K + + D
Sbjct 189 SPGVGGARSNSKAEEHILKICANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDP 248
Query 471 FKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDE 530
F+ I ++M+D + + K EFG+Q YEQW++ ++ ++
Sbjct 249 FRERIIEIMQDIQKYCQLYPKS----------EFGSQPYEQWVIREERRA----AKEEKR 294
Query 531 ESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVR--------------A 576
+ R+C HL+KYNDAL I++ RM DA ++L +F+ ++
Sbjct 295 KERVC------AEHLKKYNDALQINDTIRMVDAYNHLNNFYKELKRRKTAESDDDXXXXX 348
Query 577 AGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKT 636
+ DE ++ L + F K ++L+ ++R P +N KL L L EE+ E I+F KT
Sbjct 349 SKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLMKLRNTLMEEFTKTEEPRGIIFTKT 408
Query 637 RALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNIL 694
R AL +WI NPK +K L G G ++ MT Q+ ++D F+ G N+L
Sbjct 409 RQSALALYHWIMDNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRG-GSINLL 467
Query 695 IATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL-TSNAGVIEKEQI 753
IAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+ +S +G +E+E +
Sbjct 468 IATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDV 527
Query 754 NMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KLL 809
N+++E MM +I R+Q + KI Q EK ++ +++ L
Sbjct 528 NIFRENMMYKAIRRVQEMPPEEYLNKIQDFQLQSIVEKQMKAKRDQRXXXXXXXXXITFL 587
Query 810 CRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH-PKPKQFSSFEKRAKIFCARQN 868
C+ C L C D++VIE H+ + F+ + R + + +I C ++
Sbjct 588 CKNCHKLICSGEDIQVIENMHHVSVKKDFQHLYHKRENXXXXXXXXXXQTNVEIIC--KD 645
Query 869 CSHDWGIHVKYKTFEIPVIKIESFVV--EDIATGVQTLYSKWKDF 911
C WG + Y+ ++P +KI +FVV ED + ++ KW +
Sbjct 646 CGQVWGNMMVYRGLDLPCLKIRNFVVAFEDXXX-TKEIFKKWGEL 689
>5jcf_D B Melanoma differentiation associated protein-5
Length=701
Score = 363 bits (933), Expect = 3e-112, Method: Compositional matrix adjust.
Identities = 235/705 (33%), Positives = 371/705 (53%), Gaps = 61/705 (9%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302
R+YQ+E+A PA+ G+N IIC PTG GKT V++ I + HL KK ++GKV+ N++P+
Sbjct 9 RDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKRKASEQGKVIVLVNKVPL 68
Query 303 YEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT--- 359
EQ F +H Y+V G+SG + + ++V+ D+II T QIL N+L T
Sbjct 69 VEQHLRKEFNPFLKHWYQVIGLSGDSELKISFPEVVKRYDVIICTAQILENSLLNATEXD 128
Query 360 -IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVIGLTA 410
LS F+L+I D+CH+T K+ YN IM YL +K+ P PQ++GLTA
Sbjct 129 ESVRLSDFSLIIIDQCHHTQKEGVYNNIMRRYLKEKIKNRKQAKXXXXLIPQPQILGLTA 188
Query 411 SVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDK 470
S GVG A++ +A ++I K+CA+LDA I TVK + +L+ V +P K + + D
Sbjct 189 SPGVGGARSNSKAEEHILKICANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDP 248
Query 471 FKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDE 530
F+ I ++M+D + + K EFG+Q YEQW++ ++ ++
Sbjct 249 FRERIIEIMQDIQKYCQLYPKS----------EFGSQPYEQWVIREERRA----AKEEKR 294
Query 531 ESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVR--------------A 576
+ R+C HL+KYNDAL I++ RM DA ++L +F+ ++
Sbjct 295 KERVC------AEHLKKYNDALQINDTIRMVDAYNHLNNFYKELKRRKTAESDDDXXXXX 348
Query 577 AGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKT 636
+ DE ++ L + F K ++L+ ++R P +N KL L L EE+ E I+F KT
Sbjct 349 SKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLMKLRNTLMEEFTKTEEPRGIIFTKT 408
Query 637 RALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNIL 694
R AL +WI NPK +K L G G ++ MT Q+ ++D F+ G N+L
Sbjct 409 RQSALALYHWIMDNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRG-GSINLL 467
Query 695 IATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL-TSNAGVIEKEQI 753
IAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+ +S +G +E+E +
Sbjct 468 IATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDV 527
Query 754 NMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KLL 809
N+++E MM +I R+Q + KI Q EK ++ +++ L
Sbjct 528 NIFRENMMYKAIRRVQEMPPEEYLNKIQDFQLQSIVEKQMKAKRDQRXXXXXXXXXITFL 587
Query 810 CRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH-PKPKQFSSFEKRAKIFCARQN 868
C+ C L C D++VIE H+ + F+ + R + + +I C ++
Sbjct 588 CKNCHKLICSGEDIQVIENMHHVSVKKDFQHLYHKRENXXXXXXXXXXQTNVEIIC--KD 645
Query 869 CSHDWGIHVKYKTFEIPVIKIESFVV--EDIATGVQTLYSKWKDF 911
C WG + Y+ ++P +KI +FVV ED + ++ KW +
Sbjct 646 CGQVWGNMMVYRGLDLPCLKIRNFVVAFEDXXX-TKEIFKKWGEL 689
>6gjz_A A Interferon-induced helicase C domain-containing protein
1
Length=1007
Score = 369 bits (948), Expect = 3e-111, Method: Compositional matrix adjust.
Identities = 247/701 (35%), Positives = 377/701 (54%), Gaps = 61/701 (9%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302
R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ +
Sbjct 310 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 369
Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358
EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G
Sbjct 370 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 428
Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408
LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL
Sbjct 429 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKXXXXAIPLPQILGL 488
Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468
TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F +
Sbjct 489 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIADDTRE 548
Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528
+ FK + ++M ++ ++ +FGTQ YEQW + ++K D
Sbjct 549 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 594
Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579
+ + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F
Sbjct 595 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNXXXXX 648
Query 580 ---DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETIT-ILFVK 635
DE ++ L F + + L+ ++ +P EN KL L + E++ + E+ I+F K
Sbjct 649 XKLDETDEFLMNLFFDNKKMLKKLAENPKYENEKLIKLRNTILEQFTRSEESSRGIIFTK 708
Query 636 TRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 693
TR AL WI N K + +K L G G +++ MT QK ++ F+ +G+ N+
Sbjct 709 TRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TGEINL 767
Query 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN-AGVIEKEQ 752
LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+TS+ +GV E+E
Sbjct 768 LIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSGSGVTEREI 827
Query 753 INMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KL 808
+N ++EKMM +I R+Q + KIL +Q EK ++ + K D + L
Sbjct 828 VNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMKVKRSIAKQYNDNPSLITL 887
Query 809 LCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPK-PKQFSSFEKRAKIFCARQ 867
LC+ C L C ++ VIE+ H+ + FK ++ R + K ++ +I C
Sbjct 888 LCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKALQKXXXXYQTNGEIIC--- 944
Query 868 NCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908
C WG + +K ++P +KI +FVV + Y KW
Sbjct 945 KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKW 985
>5jch_D B Melanoma differentiation associated protein-5
Length=701
Score = 361 bits (926), Expect = 3e-111, Method: Compositional matrix adjust.
Identities = 234/705 (33%), Positives = 370/705 (52%), Gaps = 61/705 (9%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302
R+YQ+E+A PA+ G+N IIC PTG GKT V++ I + HL KK ++GKV+ N++P+
Sbjct 9 RDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKRKASEQGKVIVLVNKVPL 68
Query 303 YEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPS 362
EQ F +H Y+V G+SG + + ++V+ D+II T QIL N+L
Sbjct 69 VEQHLRKEFNPFLKHWYQVIGLSGDSELKISFPEVVKRYDVIICTAQILENSLLNXXXXX 128
Query 363 ----LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVIGLTA 410
LS F+L+I D+CH+T K+ YN IM YL +K+ P PQ++GLTA
Sbjct 129 ESVRLSDFSLIIIDQCHHTQKEGVYNNIMRRYLKEKIKNRKQAKEXXXLIPQPQILGLTA 188
Query 411 SVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDK 470
S GVG A++ +A ++I K+CA+LDA I TVK + +L+ V +P K + + D
Sbjct 189 SPGVGGARSNSKAEEHILKICANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDP 248
Query 471 FKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDE 530
F+ I ++M+D + + K EFG+Q YEQW++ ++ ++
Sbjct 249 FRERIIEIMQDIQKYCQLYPKS----------EFGSQPYEQWVIREERRA----AKEEKR 294
Query 531 ESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVR--------------A 576
+ R+C HL+KYNDAL I++ RM DA ++L +F+ ++
Sbjct 295 KERVC------AEHLKKYNDALQINDTIRMVDAYNHLNNFYKELKRRKTAESDDXXXXXX 348
Query 577 AGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKT 636
+ DE ++ L + F K ++L+ ++R P +N KL L L EE+ E I+F KT
Sbjct 349 SKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLMKLRNTLMEEFTKTEEPRGIIFTKT 408
Query 637 RALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNIL 694
R AL +WI NPK +K L G G ++ MT Q+ ++D F+ G N+L
Sbjct 409 RQSALALYHWIMDNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRG-GSINLL 467
Query 695 IATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL-TSNAGVIEKEQI 753
IAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+ +S +G +E+E +
Sbjct 468 IATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDV 527
Query 754 NMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KLL 809
N+++E MM +I R+Q + KI Q EK ++ +++ L
Sbjct 528 NIFRENMMYKAIRRVQEMPPEEYLNKIQDFQLQSIVEKQMKAKRDQRXXXXXXXXXITFL 587
Query 810 CRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH-PKPKQFSSFEKRAKIFCARQN 868
C+ C L C D++VIE H+ + F+ + R + + +I C ++
Sbjct 588 CKNCHKLICSGEDIQVIENMHHVSVKKDFQHLYHKRENXXXXXXXXXXQTNVEIIC--KD 645
Query 869 CSHDWGIHVKYKTFEIPVIKIESFVV--EDIATGVQTLYSKWKDF 911
C WG + Y+ ++P +KI +FVV ED + ++ KW +
Sbjct 646 CGQVWGNMMVYRGLDLPCLKIRNFVVAFEDXXX-TKEIFKKWGEL 689
>6gkm_A A Interferon-induced helicase C domain-containing protein
1
Length=1007
Score = 368 bits (944), Expect = 9e-111, Method: Compositional matrix adjust.
Identities = 244/702 (35%), Positives = 375/702 (53%), Gaps = 63/702 (9%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302
R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ +
Sbjct 310 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 369
Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358
EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G
Sbjct 370 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 428
Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408
LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL
Sbjct 429 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGL 488
Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468
TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F +
Sbjct 489 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIADDTRE 548
Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528
+ FK + ++M ++ ++ +FGTQ YEQW + ++K D
Sbjct 549 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 594
Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579
+ + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F
Sbjct 595 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNDSXXS 648
Query 580 ---DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETIT-ILFVK 635
DE ++ L F + + L+ ++ +P EN KL L + E++ + E+ I+F K
Sbjct 649 LKLDETDEFLMNLFFDNKKMLKKLAENPKYENEKLIKLRNTILEQFTRSEESSRGIIFTK 708
Query 636 TRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 693
TR AL WI N K + +K L G G +++ MT QK ++ F+ +G+ N+
Sbjct 709 TRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TGEINL 767
Query 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN-AGVIEKEQ 752
LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+TS+ +GV E+E
Sbjct 768 LIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSGSGVTEREI 827
Query 753 INMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKK----- 807
+N ++EKMM +I R+Q + KIL +Q + + + + + N
Sbjct 828 VNDFREKMMYKAINRVQNMKPEEYAHKILELQV-QSILEKKMKVKRSIAXXYNDNPSLIT 886
Query 808 LLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPK-PKQFSSFEKRAKIFCAR 866
LLC+ C L C ++ VIE+ H+ + FK ++ R + K ++ +I C
Sbjct 887 LLCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKALQKXXXDYQTNGEIIC-- 944
Query 867 QNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908
C WG + +K ++P +KI +FVV + Y KW
Sbjct 945 -KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKW 985
>5jc7_B B Melanoma differentiation associated protein-5
Length=701
Score = 360 bits (923), Expect = 9e-111, Method: Compositional matrix adjust.
Identities = 232/704 (33%), Positives = 367/704 (52%), Gaps = 59/704 (8%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302
R+YQ+E+A PA+ G+N IIC PTG GKT V++ I + HL KK ++GKV+ N++P+
Sbjct 9 RDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKRKASEQGKVIVLVNKVPL 68
Query 303 YEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPS 362
EQ F +H Y+V G+SG + + ++V+ D+II T QIL N+L
Sbjct 69 VEQHLRKEFNPFLKHWYQVIGLSGDSELKISFPEVVKRYDVIICTAQILENSLLNXXXXX 128
Query 363 ----LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVIGLTA 410
LS F+L+I D+CH+T K+ YN IM YL +K+ P PQ++GLTA
Sbjct 129 ESVRLSDFSLIIIDQCHHTQKEGVYNNIMRRYLKEKIKNRXXXXXXXXXXPQPQILGLTA 188
Query 411 SVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDK 470
S GVG A++ +A ++I K+CA+LDA I TVK + +L+ V +P K + + D
Sbjct 189 SPGVGGARSNSKAEEHILKICANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDP 248
Query 471 FKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDE 530
F+ I ++M+D + + K EFG+Q YEQW++ ++ ++
Sbjct 249 FRERIIEIMQDIQKYCQLYPKS----------EFGSQPYEQWVIREERRA----AKEEKR 294
Query 531 ESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVR--------------A 576
+ R+C HL+KYNDAL I++ RM DA ++L +F+ ++
Sbjct 295 KERVC------AEHLKKYNDALQINDTIRMVDAYNHLNNFYKELKRRKTAESXXXXXPLV 348
Query 577 AGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKT 636
+ DE ++ L + F K ++L+ ++R P +N KL L L EE+ E I+F KT
Sbjct 349 SKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLMKLRNTLMEEFTKTEEPRGIIFTKT 408
Query 637 RALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNIL 694
R AL +WI NPK +K L G G ++ MT Q+ ++D F+ G N+L
Sbjct 409 RQSALALYHWIMDNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRG-GSINLL 467
Query 695 IATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL-TSNAGVIEKEQI 753
IAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+ +S +G +E+E +
Sbjct 468 IATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDV 527
Query 754 NMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KLL 809
N+++E MM +I R+Q + KI Q EK ++ +++ L
Sbjct 528 NIFRENMMYKAIRRVQEMPPEEYLNKIQDFQLQSIVEKQMKAKRDQRXXXXXXXXXITFL 587
Query 810 CRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRP-HPKPKQFSSFEKRAKIFCARQN 868
C+ C L C D++VIE H+ + F+ + R +I C ++
Sbjct 588 CKNCHKLICSGEDIQVIENMHHVSVKKDFQHLYHKREXXXXXXXXXXXXXXXEIIC--KD 645
Query 869 CSHDWGIHVKYKTFEIPVIKIESFVVE-DIATGVQTLYSKWKDF 911
C WG + Y+ ++P +KI +FVV + + ++ KW +
Sbjct 646 CGQVWGNMMVYRGLDLPCLKIRNFVVAFEXXXTTKEIFKKWGEL 689
>5jc7_A A Melanoma differentiation associated protein-5
Length=701
Score = 359 bits (922), Expect = 1e-110, Method: Compositional matrix adjust.
Identities = 232/704 (33%), Positives = 367/704 (52%), Gaps = 59/704 (8%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302
R+YQ+E+A PA+ G+N IIC PTG GKT V++ I + HL KK ++GKV+ N++P+
Sbjct 9 RDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKRKASEQGKVIVLVNKVPL 68
Query 303 YEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPS 362
EQ F +H Y+V G+SG + + ++V+ D+II T QIL N+L
Sbjct 69 VEQHLRKEFNPFLKHWYQVIGLSGDSELKISFPEVVKRYDVIICTAQILENSLLNXXXXX 128
Query 363 ----LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVIGLTA 410
LS F+L+I D+CH+T K+ YN IM YL +K+ P PQ++GLTA
Sbjct 129 ESVRLSDFSLIIIDQCHHTQKEGVYNNIMRRYLKEKIKNRXXXXXXXXXXPQPQILGLTA 188
Query 411 SVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDK 470
S GVG A++ +A ++I K+CA+LDA I TVK + +L+ V +P K + + D
Sbjct 189 SPGVGGARSNSKAEEHILKICANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDP 248
Query 471 FKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDE 530
F+ I ++M+D + + K EFG+Q YEQW++ ++ ++
Sbjct 249 FRERIIEIMQDIQKYCQLYPKS----------EFGSQPYEQWVIREERRA----AKEEKR 294
Query 531 ESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVR--------------A 576
+ R+C HL+KYNDAL I++ RM DA ++L +F+ ++
Sbjct 295 KERVC------AEHLKKYNDALQINDTIRMVDAYNHLNNFYKELKRRKTAESXXXXXXXX 348
Query 577 AGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKT 636
+ DE ++ L + F K ++L+ ++R P +N KL L L EE+ E I+F KT
Sbjct 349 SKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLMKLRNTLMEEFTKTEEPRGIIFTKT 408
Query 637 RALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNIL 694
R AL +WI NPK +K L G G ++ MT Q+ ++D F+ G N+L
Sbjct 409 RQSALALYHWIMDNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRG-GSINLL 467
Query 695 IATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL-TSNAGVIEKEQI 753
IAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+ +S +G +E+E +
Sbjct 468 IATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDV 527
Query 754 NMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KLL 809
N+++E MM +I R+Q + KI Q EK ++ +++ L
Sbjct 528 NIFRENMMYKAIRRVQEMPPEEYLNKIQDFQLQSIVEKQMKAKRDQRXXXXXXXXXITFL 587
Query 810 CRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRP-HPKPKQFSSFEKRAKIFCARQN 868
C+ C L C D++VIE H+ + F+ + R +I C ++
Sbjct 588 CKNCHKLICSGEDIQVIENMHHVSVKKDFQHLYHKREXXXXXXXXXXXXXXXEIIC--KD 645
Query 869 CSHDWGIHVKYKTFEIPVIKIESFVVE-DIATGVQTLYSKWKDF 911
C WG + Y+ ++P +KI +FVV + + ++ KW +
Sbjct 646 CGQVWGNMMVYRGLDLPCLKIRNFVVAFEXXXXTKEIFKKWGEL 689
>6gkh_A A Interferon-induced helicase C domain-containing protein
1
Length=1007
Score = 365 bits (937), Expect = 9e-110, Method: Compositional matrix adjust.
Identities = 246/701 (35%), Positives = 375/701 (53%), Gaps = 61/701 (9%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302
R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ +
Sbjct 310 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 369
Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358
EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G
Sbjct 370 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 428
Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408
LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL
Sbjct 429 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGL 488
Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468
TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F +
Sbjct 489 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIADDTRE 548
Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528
+ FK + ++M ++ ++ +FGTQ YEQW + ++K D
Sbjct 549 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 594
Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579
+ + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F
Sbjct 595 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNDXXKS 648
Query 580 ---DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETIT-ILFVK 635
DE ++ L F + + L+ ++ +P EN KL L + E++ + E+ I+F K
Sbjct 649 LKLDETDEFLMNLFFDNKKMLKKLAENPKYENEKLIKLRNTILEQFTRSEESSRGIIFTK 708
Query 636 TRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 693
TR AL WI N K + +K L G G +++ MT QK ++ F+ +G+ N+
Sbjct 709 TRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TGEINL 767
Query 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN-AGVIEKEQ 752
LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+TS+ +GV E+E
Sbjct 768 LIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSGSGVTEREI 827
Query 753 INMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KL 808
+N ++EKMM +I R+Q + KIL +Q EK ++ + K D + L
Sbjct 828 VNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMKVKRSIAKQYNDNPSLITL 887
Query 809 LCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH-PKPKQFSSFEKRAKIFCARQ 867
LC+ C L C ++ VIE+ H+ + FK ++ R + + +I C
Sbjct 888 LCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENXXXXXXXXXXQTNGEIIC--- 944
Query 868 NCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908
C WG + +K ++P +KI +FVV + Y KW
Sbjct 945 KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKW 985
>7bkp_A A Interferon-induced helicase C domain-containing protein
1
Length=1025
Score = 358 bits (919), Expect = 5e-107, Method: Compositional matrix adjust.
Identities = 243/720 (34%), Positives = 374/720 (52%), Gaps = 81/720 (11%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302
R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ +
Sbjct 310 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 369
Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358
EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G
Sbjct 370 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 428
Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408
LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL
Sbjct 429 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGL 488
Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468
TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F +
Sbjct 489 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIADDTRE 548
Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528
+ FK + ++M ++ ++ +FGTQ YEQW + ++K D
Sbjct 549 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 594
Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579
+ + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F
Sbjct 595 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNDSXXX 648
Query 580 ---------------------DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFIL 618
DE ++ L F + + L+ ++ +P EN KL L +
Sbjct 649 XXXXXXXXXXXXXXXXXSLKLDETDEFLMNLFFDNKKMLKKLAENPKYENEKLIKLRNTI 708
Query 619 QEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTL 675
E++ + E+ I+F KTR AL WI N K + +K L G G +++ MT
Sbjct 709 LEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQ 768
Query 676 PAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARG 735
QK ++ F+ +G+ N+LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA
Sbjct 769 TEQKEVISKFR-TGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 827
Query 736 SKCFLLTSN-AGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQ 794
S L+TS+ +GV E+E +N ++EKM +I R+Q + KIL +Q + +
Sbjct 828 STYVLVTSSGSGVTEREIVNDFREKMKYKAINRVQNMKPEEYAHKILELQV-QSILEKKM 886
Query 795 EKPKPVPDKENKK-----LLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPK 849
+ + + N LLC+ C L C ++ VIE+ H+ + FK ++ R +
Sbjct 887 KVKRSIAXXYNDNPSLITLLCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKA 946
Query 850 -PKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908
K ++ +I C C WG + +K ++P +KI +FVV + Y KW
Sbjct 947 LQKXXXDYQTNGEIIC---KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKW 1003
>7jl2_E C Interferon-induced helicase C domain-containing protein
1
Length=739
Score = 351 bits (900), Expect = 6e-107, Method: Compositional matrix adjust.
Identities = 249/722 (34%), Positives = 367/722 (51%), Gaps = 84/722 (12%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302
R YQ+E+A PA++GKN IIC PTG GKT V++ I + HL KK + GKV+ N++ +
Sbjct 23 RPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLL 82
Query 303 YEQQKSVFSKYFE---RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
EQ +F K F+ + YRV G+SG T + ++V++ DIII T QIL N+L
Sbjct 83 VEQ---LFRKEFQPFLKKWYRVIGLSGDTQLKISFPEVVKSCDIIISTAQILENSLLNLX 139
Query 360 IP-----SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVI 406
LS F+L+I DECH+T+K+ YN IM +YL QKL + PLPQ++
Sbjct 140 XXXXAGVQLSDFSLIIIDECHHTNKEAVYNNIMRHYLMQKLKNNRLKKXXXXVIPLPQIL 199
Query 407 GLTASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESR 466
GLTAS GVG A +A ++I KLCA+LDA I TVK NL++L+ + +P K F +
Sbjct 200 GLTASPGVGGATKQAKAEEHILKLCANLDAFTIKTVKENLDQLKNQIQEPCKKFAIADXX 259
Query 467 ISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMP 526
D FK + ++M ++ + + +S +FGTQ YEQW + ++K
Sbjct 260 REDPFKEKLLEIMTRIQTYCQ-----MSPMS-----DFGTQPYEQWAIQMEKKA----AK 305
Query 527 DKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQD- 585
+ + + R+C HLRKYN+AL I++ RM DA +L+ F++ + F IE
Sbjct 306 EGNRKERVC------AEHLRKYNEALQINDTIRMIDAYTHLETFYNEEKDKKFAVIEXXX 359
Query 586 ------------------------------LTQRFEEKLQELESVSRDPSNENPKLEDLC 615
L F E + L+ ++ +P EN KL L
Sbjct 360 XXXXXXXXXXXXXXXXXXXXXXXXXETDRFLMTLFFENNKMLKRLAENPEYENEKLTKLR 419
Query 616 FILQEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTG 672
+ E+Y E+ I+F KTR AL WI N K + +K L G G +++
Sbjct 420 NTIMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGXSSEFKP 479
Query 673 MTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGR 732
MT QK ++ F+ +G N+LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR R
Sbjct 480 MTQNEQKEVISKFR-TGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRAR 538
Query 733 ARGSKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIR 791
A S L+ S +GVIE+E +N ++EKMM +I +Q + KIL +Q +
Sbjct 539 ADESTYVLVAHSGSGVIERETVNDFREKMMYKAIHCVQNMKPEEYAHKILELQMQSIMEK 598
Query 792 DSQEKPKPVPDKENK----KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH 847
+ K N LC+ C LAC D+ VIE+ H+ + FKE ++ R
Sbjct 599 KMKTKRNIAKHYXNNPSLITFLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKELYIVREK 658
Query 848 PKPKQFSSFEK-RAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYS 906
+ +I C C WG + +K ++P +KI +FVV + Y
Sbjct 659 XXXXXXXXXXQINGEIIC---KCGQAWGTMMVHKGLDLPCLKIRNFVVVFKNNSTKKQYK 715
Query 907 KW 908
KW
Sbjct 716 KW 717
>7jl2_C A Interferon-induced helicase C domain-containing protein
1
Length=739
Score = 351 bits (900), Expect = 6e-107, Method: Compositional matrix adjust.
Identities = 249/722 (34%), Positives = 367/722 (51%), Gaps = 84/722 (12%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302
R YQ+E+A PA++GKN IIC PTG GKT V++ I + HL KK + GKV+ N++ +
Sbjct 23 RPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLL 82
Query 303 YEQQKSVFSKYFE---RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
EQ +F K F+ + YRV G+SG T + ++V++ DIII T QIL N+L
Sbjct 83 VEQ---LFRKEFQPFLKKWYRVIGLSGDTQLKISFPEVVKSCDIIISTAQILENSLLNLX 139
Query 360 IP-----SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVI 406
LS F+L+I DECH+T+K+ YN IM +YL QKL + PLPQ++
Sbjct 140 XXXXAGVQLSDFSLIIIDECHHTNKEAVYNNIMRHYLMQKLKNNRLKKXXXXVIPLPQIL 199
Query 407 GLTASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESR 466
GLTAS GVG A +A ++I KLCA+LDA I TVK NL++L+ + +P K F +
Sbjct 200 GLTASPGVGGATKQAKAEEHILKLCANLDAFTIKTVKENLDQLKNQIQEPCKKFAIADXX 259
Query 467 ISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMP 526
D FK + ++M ++ + + +S +FGTQ YEQW + ++K
Sbjct 260 REDPFKEKLLEIMTRIQTYCQ-----MSPMS-----DFGTQPYEQWAIQMEKKA----AK 305
Query 527 DKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQD- 585
+ + + R+C HLRKYN+AL I++ RM DA +L+ F++ + F IE
Sbjct 306 EGNRKERVC------AEHLRKYNEALQINDTIRMIDAYTHLETFYNEEKDKKFAVIEXXX 359
Query 586 ------------------------------LTQRFEEKLQELESVSRDPSNENPKLEDLC 615
L F E + L+ ++ +P EN KL L
Sbjct 360 XXXXXXXXXXXXXXXXXXXXXXXXXETDRFLMTLFFENNKMLKRLAENPEYENEKLTKLR 419
Query 616 FILQEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTG 672
+ E+Y E+ I+F KTR AL WI N K + +K L G G +++
Sbjct 420 NTIMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGXSSEFKP 479
Query 673 MTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGR 732
MT QK ++ F+ +G N+LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR R
Sbjct 480 MTQNEQKEVISKFR-TGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRAR 538
Query 733 ARGSKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIR 791
A S L+ S +GVIE+E +N ++EKMM +I +Q + KIL +Q +
Sbjct 539 ADESTYVLVAHSGSGVIERETVNDFREKMMYKAIHCVQNMKPEEYAHKILELQMQSIMEK 598
Query 792 DSQEKPKPVPDKENK----KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH 847
+ K N LC+ C LAC D+ VIE+ H+ + FKE ++ R
Sbjct 599 KMKTKRNIAKHYXNNPSLITFLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKELYIVREK 658
Query 848 PKPKQFSSFEK-RAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYS 906
+ +I C C WG + +K ++P +KI +FVV + Y
Sbjct 659 XXXXXXXXXXQINGEIIC---KCGQAWGTMMVHKGLDLPCLKIRNFVVVFKNNSTKKQYK 715
Query 907 KW 908
KW
Sbjct 716 KW 717
>7jl2_G E Interferon-induced helicase C domain-containing protein
1
Length=739
Score = 351 bits (900), Expect = 6e-107, Method: Compositional matrix adjust.
Identities = 249/722 (34%), Positives = 367/722 (51%), Gaps = 84/722 (12%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302
R YQ+E+A PA++GKN IIC PTG GKT V++ I + HL KK + GKV+ N++ +
Sbjct 23 RPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLL 82
Query 303 YEQQKSVFSKYFE---RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
EQ +F K F+ + YRV G+SG T + ++V++ DIII T QIL N+L
Sbjct 83 VEQ---LFRKEFQPFLKKWYRVIGLSGDTQLKISFPEVVKSCDIIISTAQILENSLLNLX 139
Query 360 IP-----SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVI 406
LS F+L+I DECH+T+K+ YN IM +YL QKL + PLPQ++
Sbjct 140 XXXXAGVQLSDFSLIIIDECHHTNKEAVYNNIMRHYLMQKLKNNRLKKXXXXVIPLPQIL 199
Query 407 GLTASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESR 466
GLTAS GVG A +A ++I KLCA+LDA I TVK NL++L+ + +P K F +
Sbjct 200 GLTASPGVGGATKQAKAEEHILKLCANLDAFTIKTVKENLDQLKNQIQEPCKKFAIADXX 259
Query 467 ISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMP 526
D FK + ++M ++ + + +S +FGTQ YEQW + ++K
Sbjct 260 REDPFKEKLLEIMTRIQTYCQ-----MSPMS-----DFGTQPYEQWAIQMEKKA----AK 305
Query 527 DKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQD- 585
+ + + R+C HLRKYN+AL I++ RM DA +L+ F++ + F IE
Sbjct 306 EGNRKERVC------AEHLRKYNEALQINDTIRMIDAYTHLETFYNEEKDKKFAVIEXXX 359
Query 586 ------------------------------LTQRFEEKLQELESVSRDPSNENPKLEDLC 615
L F E + L+ ++ +P EN KL L
Sbjct 360 XXXXXXXXXXXXXXXXXXXXXXXXXETDRFLMTLFFENNKMLKRLAENPEYENEKLTKLR 419
Query 616 FILQEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTG 672
+ E+Y E+ I+F KTR AL WI N K + +K L G G +++
Sbjct 420 NTIMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGXSSEFKP 479
Query 673 MTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGR 732
MT QK ++ F+ +G N+LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR R
Sbjct 480 MTQNEQKEVISKFR-TGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRAR 538
Query 733 ARGSKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIR 791
A S L+ S +GVIE+E +N ++EKMM +I +Q + KIL +Q +
Sbjct 539 ADESTYVLVAHSGSGVIERETVNDFREKMMYKAIHCVQNMKPEEYAHKILELQMQSIMEK 598
Query 792 DSQEKPKPVPDKENK----KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH 847
+ K N LC+ C LAC D+ VIE+ H+ + FKE ++ R
Sbjct 599 KMKTKRNIAKHYXNNPSLITFLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKELYIVREK 658
Query 848 PKPKQFSSFEK-RAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYS 906
+ +I C C WG + +K ++P +KI +FVV + Y
Sbjct 659 XXXXXXXXXXQINGEIIC---KCGQAWGTMMVHKGLDLPCLKIRNFVVVFKNNSTKKQYK 715
Query 907 KW 908
KW
Sbjct 716 KW 717
>7jl0_C A Interferon-induced helicase C domain-containing protein
1
Length=739
Score = 351 bits (900), Expect = 6e-107, Method: Compositional matrix adjust.
Identities = 249/722 (34%), Positives = 367/722 (51%), Gaps = 84/722 (12%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302
R YQ+E+A PA++GKN IIC PTG GKT V++ I + HL KK + GKV+ N++ +
Sbjct 23 RPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLL 82
Query 303 YEQQKSVFSKYFE---RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
EQ +F K F+ + YRV G+SG T + ++V++ DIII T QIL N+L
Sbjct 83 VEQ---LFRKEFQPFLKKWYRVIGLSGDTQLKISFPEVVKSCDIIISTAQILENSLLNLX 139
Query 360 IP-----SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVI 406
LS F+L+I DECH+T+K+ YN IM +YL QKL + PLPQ++
Sbjct 140 XXXXAGVQLSDFSLIIIDECHHTNKEAVYNNIMRHYLMQKLKNNRLKKXXXXVIPLPQIL 199
Query 407 GLTASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESR 466
GLTAS GVG A +A ++I KLCA+LDA I TVK NL++L+ + +P K F +
Sbjct 200 GLTASPGVGGATKQAKAEEHILKLCANLDAFTIKTVKENLDQLKNQIQEPCKKFAIADXX 259
Query 467 ISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMP 526
D FK + ++M ++ + + +S +FGTQ YEQW + ++K
Sbjct 260 REDPFKEKLLEIMTRIQTYCQ-----MSPMS-----DFGTQPYEQWAIQMEKKA----AK 305
Query 527 DKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQD- 585
+ + + R+C HLRKYN+AL I++ RM DA +L+ F++ + F IE
Sbjct 306 EGNRKERVC------AEHLRKYNEALQINDTIRMIDAYTHLETFYNEEKDKKFAVIEXXX 359
Query 586 ------------------------------LTQRFEEKLQELESVSRDPSNENPKLEDLC 615
L F E + L+ ++ +P EN KL L
Sbjct 360 XXXXXXXXXXXXXXXXXXXXXXXXXETDRFLMTLFFENNKMLKRLAENPEYENEKLTKLR 419
Query 616 FILQEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTG 672
+ E+Y E+ I+F KTR AL WI N K + +K L G G +++
Sbjct 420 NTIMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGXSSEFKP 479
Query 673 MTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGR 732
MT QK ++ F+ +G N+LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR R
Sbjct 480 MTQNEQKEVISKFR-TGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRAR 538
Query 733 ARGSKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIR 791
A S L+ S +GVIE+E +N ++EKMM +I +Q + KIL +Q +
Sbjct 539 ADESTYVLVAHSGSGVIERETVNDFREKMMYKAIHCVQNMKPEEYAHKILELQMQSIMEK 598
Query 792 DSQEKPKPVPDKENK----KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH 847
+ K N LC+ C LAC D+ VIE+ H+ + FKE ++ R
Sbjct 599 KMKTKRNIAKHYXNNPSLITFLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKELYIVREK 658
Query 848 PKPKQFSSFEK-RAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYS 906
+ +I C C WG + +K ++P +KI +FVV + Y
Sbjct 659 XXXXXXXXXXQINGEIIC---KCGQAWGTMMVHKGLDLPCLKIRNFVVVFKNNSTKKQYK 715
Query 907 KW 908
KW
Sbjct 716 KW 717
>6g1s_A A Interferon-induced helicase C domain-containing protein
1
Length=693
Score = 348 bits (894), Expect = 1e-106, Method: Compositional matrix adjust.
Identities = 241/701 (34%), Positives = 364/701 (52%), Gaps = 61/701 (9%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302
R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ +
Sbjct 1 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 60
Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358
EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G
Sbjct 61 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 119
Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408
LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL
Sbjct 120 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKXXXXXAIPLPQILGL 179
Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468
TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F
Sbjct 180 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIAXXXXX 239
Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528
+ FK + ++M ++ ++ +FGTQ YEQW + ++K D
Sbjct 240 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 285
Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579
+ + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F
Sbjct 286 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNXXXXX 339
Query 580 ---DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLN-PETITILFVK 635
DE ++ L F + + L+ ++ +P KL L + E++ + + I+F K
Sbjct 340 XXXDETDEFLMNLFFDNKKMLKKLAENPKXXXEKLIKLRNTILEQFTRSXXXSRGIIFTK 399
Query 636 TRALVDALKNWIEGNPK--LSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 693
TR AL WI N K +K L G G +++ MT QK ++ F+ + N+
Sbjct 400 TRQSTYALSQWIMENAKXXXXXVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TXXINL 458
Query 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN-AGVIEKEQ 752
LIAT+VA G+DI +CN+VI Y V N I M+Q RGR RA S L+TS+ GV E+E
Sbjct 459 LIATTVAXXGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSXXGVTEREI 518
Query 753 INMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KL 808
+N ++EKMM +I R+Q + KIL +Q EK ++ + K D + L
Sbjct 519 VNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMKVKRSIAKQYNDNPSLITL 578
Query 809 LCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEK-RAKIFCARQ 867
LC+ C L C ++ VIE+ H+ + FK ++ R + +I C
Sbjct 579 LCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKXXXXXXXXXXTNGEIIC--- 635
Query 868 NCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908
C WG + +K ++P +KI +FVV + Y KW
Sbjct 636 KCGQAWGTMMVHKGLDLPCLKIRNFVVNFXXXSPKKQYKKW 676
>6g1x_A A Interferon-induced helicase C domain-containing protein
1
Length=696
Score = 347 bits (891), Expect = 3e-106, Method: Compositional matrix adjust.
Identities = 240/701 (34%), Positives = 364/701 (52%), Gaps = 61/701 (9%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302
R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ +
Sbjct 4 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 63
Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358
EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G
Sbjct 64 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 122
Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408
LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL
Sbjct 123 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKXXXXAIPLPQILGL 182
Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468
TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F +
Sbjct 183 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIADXXXX 242
Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528
+ FK + ++M ++ ++ +FGTQ YEQW + ++K D
Sbjct 243 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 288
Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579
+ + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F
Sbjct 289 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNXXXXX 342
Query 580 ---DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETI-TILFVK 635
DE ++ L F + + L+ ++ +P KL L + E++ + + I+F K
Sbjct 343 XXLDETDEFLMNLFFDNKKMLKKLAENPXXXXEKLIKLRNTILEQFTRSXXSSRGIIFTK 402
Query 636 TRALVDALKNWIEGNP--KLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 693
TR AL WI N +K L G G +++ MT QK ++ F+ + N+
Sbjct 403 TRQSTYALSQWIMENAXXXXXXVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TXXINL 461
Query 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNA-GVIEKEQ 752
LIAT+VA G+DI +CN+VI Y V N I M+Q RGR RA S L+TS+ GV E+E
Sbjct 462 LIATTVAXXGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSGXGVTEREI 521
Query 753 INMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KL 808
+N ++EKMM +I R+Q + KIL +Q EK ++ + K D + L
Sbjct 522 VNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMKVKRSIAKQYNDNPSLITL 581
Query 809 LCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHP-KPKQFSSFEKRAKIFCARQ 867
LC+ C L C ++ VIE+ H+ + FK ++ R + +I C
Sbjct 582 LCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKXXXXXXXXXXXXGEIIC--- 638
Query 868 NCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908
C WG + +K ++P +KI +FVV + Y KW
Sbjct 639 KCGQAWGTMMVHKGLDLPCLKIRNFVVNFXXXXPKKQYKKW 679
>6h66_A A Interferon-induced helicase C domain-containing protein
1
Length=1007
Score = 355 bits (912), Expect = 3e-106, Method: Compositional matrix adjust.
Identities = 243/701 (35%), Positives = 368/701 (52%), Gaps = 61/701 (9%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302
R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ +
Sbjct 310 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 369
Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358
EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G
Sbjct 370 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 428
Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408
LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL
Sbjct 429 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGL 488
Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468
TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F
Sbjct 489 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIAXXXXX 548
Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528
+ FK + ++M ++ ++ +FGTQ YEQW + ++K D
Sbjct 549 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 594
Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579
+ + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F
Sbjct 595 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNDSXXX 648
Query 580 ---DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETIT-ILFVK 635
DE ++ L F + + L+ ++ +P KL L + E++ + E+ I+F K
Sbjct 649 XKLDETDEFLMNLFFDNKKMLKKLAENPKXXXEKLIKLRNTILEQFTRSEESSRGIIFTK 708
Query 636 TRALVDALKNWIEGNPKLSF--LKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 693
TR AL WI N K +K L G G +++ MT QK ++ F+ +G+ N+
Sbjct 709 TRQSTYALSQWIMENAKXXXVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TGEINL 767
Query 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN-AGVIEKEQ 752
LIAT+VA+EG+DI +CN+VI Y N I M+Q RGR RA S L+TS+ GV E+E
Sbjct 768 LIATTVAEEGLDIKECNIVIRYGLXXNEIAMVQARGRARADESTYVLVTSSXXGVTEREI 827
Query 753 INMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KL 808
+N ++EKMM +I R+Q + KIL +Q EK ++ + K D + L
Sbjct 828 VNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMKVKRSIAKQYNDNPSLITL 887
Query 809 LCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEK-RAKIFCARQ 867
LC+ C L C ++ VIE+ H+ + FK ++ R + +I C
Sbjct 888 LCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKXXXXXXXXXXTNGEIIC--- 944
Query 868 NCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908
C WG + +K ++P +KI +FVV + Y KW
Sbjct 945 KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKW 985
>7nic_A A Interferon-induced helicase C domain-containing protein
1
Length=1025
Score = 355 bits (912), Expect = 5e-106, Method: Compositional matrix adjust.
Identities = 245/719 (34%), Positives = 374/719 (52%), Gaps = 79/719 (11%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302
R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ +
Sbjct 310 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 369
Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358
EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G
Sbjct 370 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 428
Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408
LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL
Sbjct 429 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGL 488
Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468
TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F +
Sbjct 489 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIADDTRE 548
Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528
+ FK + ++M ++ ++ +FGTQ YEQW + ++K D
Sbjct 549 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 594
Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579
+ + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F
Sbjct 595 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNXXXXX 648
Query 580 ---------------------DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFIL 618
DE ++ L F + + L+ ++ +P EN KL L +
Sbjct 649 XXXXXXXXXXXXXXXXXSLKLDETDEFLMNLFFDNKKMLKKLAENPKYENEKLIKLRNTI 708
Query 619 QEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTL 675
E++ + E+ I+F KTR AL WI N K + +K L G G +++ MT
Sbjct 709 LEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQ 768
Query 676 PAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARG 735
QK ++ F+ +G+ N+LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA
Sbjct 769 TEQKEVISKFR-TGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 827
Query 736 SKCFLLTSN-AGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIR 791
S L+TS+ +GV E+E +N ++EKM +I R+Q + KIL +Q EK ++
Sbjct 828 STYVLVTSSGSGVTEREIVNDFREKMKYKAINRVQNMKPEEYAHKILELQVQSILEKKMK 887
Query 792 DSQEKPKPVPDKENK-KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH-PK 849
+ K D + LLC+ C L C ++ VIE+ H+ + FK ++ R +
Sbjct 888 VKRSIAKQYNDNPSLITLLCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENXXX 947
Query 850 PKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908
+ +I C C WG + +K ++P +KI +FVV + Y KW
Sbjct 948 XXXXXXXQTNGEIIC---KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKW 1003
>4gl2_A A Interferon-induced helicase C domain-containing protein
1
Length=699
Score = 345 bits (884), Expect = 4e-105, Method: Compositional matrix adjust.
Identities = 242/704 (34%), Positives = 359/704 (51%), Gaps = 66/704 (9%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302
R YQ+E+A PA++GKN IIC PTGCGKT V++ I + HL KK + GKV+ N++ +
Sbjct 9 RPYQMEVAQPALEGKNIIICLPTGCGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLL 68
Query 303 YEQQKSVFSKYFE---RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
EQ +F K F+ + YRV G+S + ++V++ DIII T QIL N+L
Sbjct 69 VEQ---LFRKEFQPFLKKWYRVIGLSXXXXLKISFPEVVKSCDIIISTAQILENSLLXXX 125
Query 360 IP-----SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVI 406
LS F+L+I DECH+T+K+ YN IM +YL QKL + PLPQ++
Sbjct 126 XXXXXGVQLSDFSLIIIDECHHTNKEAVYNNIMRHYLMQKLKNNRLKKXXXXVIPLPQIL 185
Query 407 GLTASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESR 466
GLTAS GVG A +A ++I KLCA+LDA I TVK NL++L+ + +P K F +
Sbjct 186 GLTASPGVGGATKQAKAEEHILKLCANLDAFTIKTVKENLDQLKNQIQEPCKKFAIADXX 245
Query 467 ISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMP 526
FK + ++M ++ + + +S +FGTQ YEQW + ++K
Sbjct 246 XXXPFKEKLLEIMTRIQTYCQ-----MSPMS-----DFGTQPYEQWAIQMEKKA----AK 291
Query 527 DKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF------- 579
+ + + R+C HLRKYN+AL I++ RM DA +L+ F++ + F
Sbjct 292 EGNRKERVC------AEHLRKYNEALQINDTIRMIDAYTHLETFYNEEKDKKFXXXXXXX 345
Query 580 ------DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETIT-IL 632
DE ++ L F E + L+ ++ +P KL L + E+Y E+ I+
Sbjct 346 XXXXXLDETDRFLMTLFFENNKMLKRLAENPXXXXEKLTKLRNTIMEQYTRTEESARGII 405
Query 633 FVKTRALVDALKNWIEGNPKLSFLKPGI--LTGRGKTNQNTGMTLPAQKCILDAFKASGD 690
F KTR AL WI N K + L G G +++ MT QK ++ F+ +
Sbjct 406 FTKTRQSAYALSQWITENEKFAXXXXXAHHLIGAGHSSEFKPMTQNEQKEVISKFR-TXX 464
Query 691 HNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLT-SNAGVIE 749
N+LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+ S +GVIE
Sbjct 465 XNLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAHSGSGVIE 524
Query 750 KEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENK--- 806
+E +N ++EKMM +I +Q + KIL +Q + + K
Sbjct 525 RETVNDFREKMMYKAIHCVQNMKPEEYAHKILELQMQSIMEKKMKTKXXXXXXXXXXPSL 584
Query 807 -KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSR-PHPKPKQFSSFEKRAKIFC 864
LC+ C LAC D+ VIE+ H+ + FKE ++ R +I C
Sbjct 585 ITFLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKELYIVRXXXXXXXXXXXXXXXGEIIC 644
Query 865 ARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908
C WG + +K +P +KI +FVV + Y KW
Sbjct 645 ---KCGQAWGTMMVHKXXXLPCLKIRNFVVVFKNNSTKKQYKKW 685
>4gl2_B B Interferon-induced helicase C domain-containing protein
1
Length=699
Score = 343 bits (881), Expect = 1e-104, Method: Compositional matrix adjust.
Identities = 242/704 (34%), Positives = 359/704 (51%), Gaps = 66/704 (9%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302
R YQ+E+A PA++GKN IIC PTGCGKT V++ I + HL KK + GKV+ N++ +
Sbjct 9 RPYQMEVAQPALEGKNIIICLPTGCGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLL 68
Query 303 YEQQKSVFSKYFE---RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
EQ +F K F+ + YRV G+SG + ++V++ DIII T QIL N+L
Sbjct 69 VEQ---LFRKEFQPFLKKWYRVIGLSGXXXLKISFPEVVKSCDIIISTAQILENSLLNXX 125
Query 360 IP-----SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVI 406
LS F+L+I DECH+T+K+ YN IM +YL QKL + PLPQ++
Sbjct 126 XXXXXGVQLSDFSLIIIDECHHTNKEAVYNNIMRHYLMQKLKNNRLKKXXXXVIPLPQIL 185
Query 407 GLTASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESR 466
GLTAS GVG A +A ++I KLCA+LDA I TVK NL++L+ + +P K F
Sbjct 186 GLTASPGVGGATKQAKAEEHILKLCANLDAFTIKTVKENLDQLKNQIQEPCKKFAIXXXX 245
Query 467 ISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMP 526
FK + ++M ++ + + +S +FGTQ YEQW + ++K
Sbjct 246 XXXPFKEKLLEIMTRIQTYCQ-----MSPMS-----DFGTQPYEQWAIQMEKKA----AK 291
Query 527 DKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF------- 579
+ + + R+C HLRKYN+AL I++ RM DA +L+ F++ + F
Sbjct 292 EGNRKERVC------AEHLRKYNEALQINDTIRMIDAYTHLETFYNEEKDKKFXXXXXXX 345
Query 580 ------DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETIT-IL 632
DE ++ L F E + L+ ++ +P N KL L + E+Y E+ I+
Sbjct 346 XXXXXLDETDRFLMTLFFENNKMLKRLAENPXXXNEKLTKLRNTIMEQYTRTEESARGII 405
Query 633 FVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGD 690
F KTR AL WI N K + K L G G +++ MT QK ++ F+ +G
Sbjct 406 FTKTRQSAYALSQWITENEKFAEVXXKAHHLIGAGHSSEFKPMTQNEQKEVISKFR-TGK 464
Query 691 HNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLT-SNAGVIE 749
+LIAT+VA+EG+DI +CN+VI Y V N I M+Q RG S L+ S +GVIE
Sbjct 465 XXLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGXXXXDESTYVLVAHSGSGVIE 524
Query 750 KEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK 806
+E +N ++EKMM +I +Q + KIL +Q EK ++ +
Sbjct 525 RETVNDFREKMMYKAIHCVQNMKPEEYAHKILELQMQSIMEKKMKXXXXXXXXXXXXPSL 584
Query 807 -KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSR-PHPKPKQFSSFEKRAKIFC 864
LC+ C LAC D+ VIE+ H+ + FKE ++ R +I C
Sbjct 585 ITFLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKELYIVRXXXXXXXXXXXXXXXGEIIC 644
Query 865 ARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908
C WG + + +P +KI +FVV + Y KW
Sbjct 645 ---KCGQAWGTMMVHXXXXLPCLKIRNFVVVFKNNSTKKQYKKW 685
>5jb2_A A LGP2
Length=680
Score = 342 bits (877), Expect = 3e-104, Method: Compositional matrix adjust.
Identities = 219/687 (32%), Positives = 364/687 (53%), Gaps = 54/687 (8%)
Query 245 NYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-KVVFFANQIPVY 303
YQLE PA++G+N+I+ PTG GKT ++ +C HL +G++G +V N++ +
Sbjct 11 GYQLEAVAPALRGRNSIVWLPTGAGKTRAAVHVCRRHL----EGRRGGRVAVLVNKVHLV 66
Query 304 EQQKSVFSKYFE--RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
+Q K F R ++VT +SG ++ Q+ + +D++I T QIL N L G
Sbjct 67 QQH---LEKEFHVLRDAFKVTAVSGDSSHKCFFGQLAKGSDVVICTAQILQNALLSGEEE 123
Query 362 S---LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418
+ L+ F+L++ DECH+T K+ YN IM +YL +KL G LPQ++GLTAS G G
Sbjct 124 ARVELTDFSLLVIDECHHTQKEAVYNKIMLSYLQKKLSGQR-DLPQILGLTASPGTGGET 182
Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 478
+ + A+++I ++CA+LD VIA+ + + + L+ V +P K + + R D F + ++
Sbjct 183 SFEGAVEHILQICANLDTEVIASAQEHAQHLQSHVPQPTKQYDLCQEREQDPFGQRLKKI 242
Query 479 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL 538
M +I + +E QN FGTQ YEQ IV ++ R C+
Sbjct 243 M-------AQIQEHMEMPELPQN--FGTQVYEQRIVELENRAA----------ERFCRKT 283
Query 539 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE 598
+ HLR+YNDAL+I++ RM DA L+ F+++ + D E+ L FEE L+
Sbjct 284 RVCALHLRRYNDALLINDTVRMMDAFQCLQQFYAD-KXXXKDPTERFLATTFEENRATLQ 342
Query 599 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKL--SFL 656
+++ D ENP+L L ILQE + + I+F KTR +L +W++ L +
Sbjct 343 ALAGDQRYENPRLSKLEEILQEHFQPPGSSRGIVFTKTRQSAHSLLSWLQDTAGLCGQHI 402
Query 657 KPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYE 716
+ +LTG G +NQ GMT Q+ ++ F+ G+ N+L +TSVA+EG+DI +CN+V+ Y
Sbjct 403 RAAVLTGSGHSNQAKGMTQNEQQDVITLFR-YGELNLLFSTSVAEEGLDIPECNIVVRYG 461
Query 717 YVGNVIKMIQTRGRGRARGSKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV 775
+ N I M+Q +GR RA+ S +L +N+ + +EQ+N +M +I +Q E
Sbjct 462 LMTNEIAMVQAQGRARAQNSMYSVLAKANSREVYREQLNESLVGLMERAIRAVQAMPERK 521
Query 776 FREKILHIQTHE------KFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEEC 829
+R KI+ +Q + K R S+ + PD + C C C +D+R +E
Sbjct 522 YRLKIVELQRNAVLSWQVKEARSSERRQLHDPD--DVYFHCVNCNVAVCRGSDIRTVEAM 579
Query 830 HYTVLGDAFKECFV---SRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPV 886
H+ + F+ + + H + + F +E +I C+ C +WG+ + Y+ +P+
Sbjct 580 HHVNINPNFRFYYTVSSGKIHFE-RTFRDWEPGCRIVCS--ECRQEWGMEMIYRNVTLPI 636
Query 887 IKIESFVVEDIATGVQTLYSKWKDFHF 913
+ I++FVV + + Y KW F
Sbjct 637 LSIKNFVV--VTPDEKKKYKKWSTVTF 661
>6h61_A A Interferon-induced helicase C domain-containing protein
1
Length=1007
Score = 350 bits (898), Expect = 3e-104, Method: Compositional matrix adjust.
Identities = 241/701 (34%), Positives = 366/701 (52%), Gaps = 61/701 (9%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302
R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ +
Sbjct 310 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 369
Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358
EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G
Sbjct 370 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 428
Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408
LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL
Sbjct 429 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNXXAIPLPQILGL 488
Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468
TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F
Sbjct 489 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIAXXXXX 548
Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528
+ FK + ++M ++ ++ +FGTQ YEQW + ++K D
Sbjct 549 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 594
Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579
+ + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F
Sbjct 595 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNXXXXX 648
Query 580 ---DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETIT-ILFVK 635
DE ++ L F + + L+ ++ +P KL L + E++ + + I+F K
Sbjct 649 XXLDETDEFLMNLFFDNKKMLKKLAENPKXXXEKLIKLRNTILEQFTRSEXSSRGIIFTK 708
Query 636 TRALVDALKNWIEGNPKLSF--LKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 693
TR AL WI N K +K L G G +++ MT QK ++ F+ +G+ N+
Sbjct 709 TRQSTYALSQWIMENAKXXXVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TGEINL 767
Query 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN-AGVIEKEQ 752
LIAT+VA+ +DI +CN+VI Y V N I M+Q RGR RA S L+TS+ GV E+E
Sbjct 768 LIATTVAEXXLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSXXGVTEREI 827
Query 753 INMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KL 808
+N ++EKMM +I R+Q + KIL +Q EK ++ + K D + L
Sbjct 828 VNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMKVKRSIAKQYNDNPSLITL 887
Query 809 LCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEK-RAKIFCARQ 867
LC+ C L C ++ VIE+ H+ + FK ++ R + +I C
Sbjct 888 LCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKXXXXXXXXXXTNGEIIC--- 944
Query 868 NCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908
C WG + +K ++P +KI +FVV + Y KW
Sbjct 945 KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKW 985
>7niq_A B Interferon-induced helicase C domain-containing protein
1
Length=1025
Score = 348 bits (892), Expect = 3e-103, Method: Compositional matrix adjust.
Identities = 242/719 (34%), Positives = 369/719 (51%), Gaps = 79/719 (11%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302
R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ +
Sbjct 310 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 369
Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358
EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G
Sbjct 370 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 428
Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408
LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL
Sbjct 429 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGL 488
Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468
TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F +
Sbjct 489 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIADDTRE 548
Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528
+ FK + ++M ++ ++ +FGTQ YEQW + ++K D
Sbjct 549 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 594
Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579
+ + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F
Sbjct 595 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNXXXXX 648
Query 580 ---------------------DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFIL 618
DE ++ L F + + L+ ++ +P KL L +
Sbjct 649 XXXXXXXXXXXXXXXXXXXXXDETDEFLMNLFFDNKKMLKKLAENPKXXXEKLIKLRNTI 708
Query 619 QEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTL 675
E++ + I+F KTR AL WI N K + +K L G G +++ MT
Sbjct 709 LEQFTRSEXXXRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQ 768
Query 676 PAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARG 735
QK ++ F+ +G+ N+LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA
Sbjct 769 TEQKEVISKFR-TGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 827
Query 736 SKCFLLTSN-AGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIR 791
S L+TS+ +GV E+E +N ++EKM +I R+Q + KIL +Q EK ++
Sbjct 828 STYVLVTSSGSGVTEREIVNDFREKMKYKAINRVQNMKPEEYAHKILELQVQSILEKKMK 887
Query 792 DSQEKPKPVPDKENK-KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKP 850
+ K D + LLC+ C L C ++ VIE+ H+ + FK ++ R +
Sbjct 888 VKRSIAKQYNDNPSLITLLCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKXX 947
Query 851 KQFSSFEK-RAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908
+I C C WG + +K ++P +KI +FVV + Y KW
Sbjct 948 XXXXXXXXTNGEIIC---KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKW 1003
>5jbg_A A LGP2
Length=680
Score = 338 bits (868), Expect = 5e-103, Method: Compositional matrix adjust.
Identities = 218/687 (32%), Positives = 360/687 (52%), Gaps = 54/687 (8%)
Query 245 NYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-KVVFFANQIPVY 303
YQLE PA++G+N+I+ PTG GKT ++ +C HL +G++G +V N++ +
Sbjct 11 GYQLEAVAPALRGRNSIVWLPTGAGKTRAAVHVCRRHL----EGRRGGRVAVLVNKVHLV 66
Query 304 EQQKSVFSKYFE--RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
+Q K F R ++VT +SG ++ Q+ + +D++I T QIL N L G
Sbjct 67 QQH---LEKEFHVLRDAFKVTAVSGDSSHKCFFGQLAKGSDVVICTAQILQNALLSGEEE 123
Query 362 S---LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418
+ L+ F+L++ DECH+T K+ YN IM +YL +KL G LPQ++GLTAS G G
Sbjct 124 ARVELTDFSLLVIDECHHTQKEAVYNKIMLSYLQKKLSGQR-DLPQILGLTASPGTGGET 182
Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 478
+ + A+++I ++CA+LD VIA+ + V +P K + + R D F + ++
Sbjct 183 SFEGAVEHILQICANLDTEVIASAQEXXXXXXXXVPQPTKQYDLCQEREQDPFGQRLKKI 242
Query 479 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL 538
M +I + +E QN FGTQ YEQ IV ++ R C+
Sbjct 243 M-------AQIQEHMEMPELPQN--FGTQVYEQRIVELENRAA----------ERFCRKT 283
Query 539 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE 598
+ HLR+YNDAL+I++ RM DA L+ F+++ + D E+ L FEE L+
Sbjct 284 RVCALHLRRYNDALLINDTVRMMDAFQCLQQFYAD-KXXXKDPTERFLATTFEENRATLQ 342
Query 599 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKL--SFL 656
+++ D ENP+L L ILQE + + I+F KTR +L +W++ L +
Sbjct 343 ALAGDQRYENPRLSKLEEILQEHFQPXGSSRGIVFTKTRQSAHSLLSWLQDTAGLCGQHI 402
Query 657 KPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYE 716
+ +LTG G +NQ GMT Q+ ++ F+ G+ N+L +TSVA+EG+DI +CN+V+ Y
Sbjct 403 RAAVLTGSGHSNQAKGMTQNEQQDVITLFR-YGELNLLFSTSVAEEGLDIPECNIVVRYG 461
Query 717 YVGNVIKMIQTRGRGRARGSKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV 775
+ N I M+Q +GR RA+ S +L +N+ + +EQ+N +M +I +Q E
Sbjct 462 LMTNEIAMVQAQGRARAQNSMYSVLAKANSREVYREQLNESLVGLMERAIRAVQAMPERK 521
Query 776 FREKILHIQTHE------KFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEEC 829
+R KI+ +Q + K R S+ + PD + C C C +D+R +E
Sbjct 522 YRLKIVELQRNAVLSWQVKEARSSERRQLHDPD--DVYFHCVNCNVAVCRGSDIRTVEAM 579
Query 830 HYTVLGDAFKECFV---SRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPV 886
H+ + F+ + + H + + F +E +I C+ C +WG+ + Y+ +P+
Sbjct 580 HHVNINPNFRFYYTVSSGKIHFE-RTFRDWEPGCRIVCS--ECRQEWGMEMIYRNVTLPI 636
Query 887 IKIESFVVEDIATGVQTLYSKWKDFHF 913
+ I++FVV + + Y KW F
Sbjct 637 LSIKNFVV--VTPDEKKKYKKWSTVTF 661
>5jaj_A A LGP2
Length=681
Score = 338 bits (866), Expect = 1e-102, Method: Compositional matrix adjust.
Identities = 218/687 (32%), Positives = 361/687 (53%), Gaps = 54/687 (8%)
Query 245 NYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-KVVFFANQIPVY 303
YQLE PA++G+N+I+ PTG GKT ++ +C HL +G++G +V N++ +
Sbjct 12 GYQLEAVAPALRGRNSIVWLPTGAGKTRAAVHVCRRHL----EGRRGGRVAVLVNKVHLV 67
Query 304 EQQKSVFSKYFE--RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
+Q K F R ++VT +SG ++ Q+ + +D++I T QIL N L G
Sbjct 68 QQH---LEKEFHVLRDAFKVTAVSGDSSHKCFFGQLAKGSDVVICTAQILQNALLSGEEE 124
Query 362 S---LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418
+ L+ F+L++ DECH+T K+ YN IM +YL +KL G LPQ++GLTAS G G
Sbjct 125 ARVELTDFSLLVIDECHHTQKEAVYNKIMLSYLQKKLSGQR-DLPQILGLTASPGTGGET 183
Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 478
+ + A+++I ++CA+LD VIA+ + +P K + + R D F + ++
Sbjct 184 SFEGAVEHILQICANLDTEVIASAQXXXXXXXXXXXQPTKQYDLCQEREQDPFGQRLKKI 243
Query 479 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL 538
M +I + +E QN FGTQ YEQ IV ++ ++ E R C+
Sbjct 244 M-------AQIQEHMEMPELPQN--FGTQVYEQRIV---------ELENRAAE-RFCRKT 284
Query 539 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE 598
+ HLR+YNDAL+I++ RM DA L+ F+++ D E+ L FEE L+
Sbjct 285 RVCALHLRRYNDALLINDTVRMMDAFQCLQQFYADXXXXK-DPTERFLATTFEENRATLQ 343
Query 599 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKL--SFL 656
+++ D ENP+L L ILQE + + I+F KTR +L +W++ L +
Sbjct 344 ALAGDQRYENPRLSKLEEILQEHFQXXGSSRGIVFTKTRQSAHSLLSWLQDTAGLCGQHI 403
Query 657 KPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYE 716
+ +LTG G +NQ GMT Q+ ++ F+ G+ N+L +TSVA+EG+DI +CN+V+ Y
Sbjct 404 RAAVLTGSGHSNQAKGMTQNEQQDVITLFR-YGELNLLFSTSVAEEGLDIPECNIVVRYG 462
Query 717 YVGNVIKMIQTRGRGRARGSKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV 775
+ N I M+Q +GR RA+ S +L +N+ + +EQ+N +M +I +Q E
Sbjct 463 LMTNEIAMVQAQGRARAQNSMYSVLAKANSREVYREQLNESLVGLMERAIRAVQAMPERK 522
Query 776 FREKILHIQTHE------KFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEEC 829
+R KI+ +Q + K R S+ + PD + C C C +D+R +E
Sbjct 523 YRLKIVELQRNAVLSWQVKEARSSERRQLHDPD--DVYFHCVNCNVAVCRGSDIRTVEAM 580
Query 830 HYTVLGDAFKECFV---SRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPV 886
H+ + F+ + + H + + F +E +I C+ C +WG+ + Y+ +P+
Sbjct 581 HHVNINPNFRFYYTVSSGKIHFE-RTFRDWEPGCRIVCS--ECRQEWGMEMIYRNVTLPI 637
Query 887 IKIESFVVEDIATGVQTLYSKWKDFHF 913
+ I++FVV + + Y KW F
Sbjct 638 LSIKNFVV--VTPDEKKKYKKWSTVTF 662
>6bzh_C C Probable ATP-dependent RNA helicase DDX58
Length=194
Score = 303 bits (776), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 167/188 (89%), Gaps = 0/188 (0%)
Query 2 TTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFL 61
T EQR++LQAF+DYI+K LDPTYILSYM+ W +EEVQYIQAEKNNKGPMEAA+LFL++L
Sbjct 7 TAEQRQNLQAFRDYIKKILDPTYILSYMSSWLEDEEVQYIQAEKNNKGPMEAASLFLQYL 66
Query 62 LELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIPT 121
L+LQ EGWF+ FLDAL HAGY GL EAIESWDF+KIEKLEE+RLLL+RL+PEFK + P
Sbjct 67 LKLQSEGWFQAFLDALYHAGYCGLCEAIESWDFQKIEKLEEHRLLLRRLEPEFKATVDPN 126
Query 122 DIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERNK 181
DI+S+LSECLINQECEEI QI TKG MAGAEK+ ECL+RSDKENWPK L+LALEK+ +K
Sbjct 127 DILSELSECLINQECEEIRQIRDTKGRMAGAEKMAECLIRSDKENWPKVLQLALEKDNSK 186
Query 182 FSELWIVE 189
FSELWIV+
Sbjct 187 FSELWIVD 194
>6bzh_B B Probable ATP-dependent RNA helicase DDX58
Length=194
Score = 303 bits (776), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 143/187 (76%), Positives = 166/187 (89%), Gaps = 0/187 (0%)
Query 2 TTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFL 61
T EQR++LQAF+DYI+K LDPTYILSYM+ W +EEVQYIQAEKNNKGPMEAA+LFL++L
Sbjct 7 TAEQRQNLQAFRDYIKKILDPTYILSYMSSWLEDEEVQYIQAEKNNKGPMEAASLFLQYL 66
Query 62 LELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIPT 121
L+LQ EGWF+ FLDAL HAGY GL EAIESWDF+KIEKLEE+RLLL+RL+PEFK + P
Sbjct 67 LKLQSEGWFQAFLDALYHAGYCGLCEAIESWDFQKIEKLEEHRLLLRRLEPEFKATVDPN 126
Query 122 DIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERNK 181
DI+S+LSECLINQECEEI QI TKG MAGAEK+ ECL+RSDKENWPK L+LALEK+ +K
Sbjct 127 DILSELSECLINQECEEIRQIRDTKGRMAGAEKMAECLIRSDKENWPKVLQLALEKDNSK 186
Query 182 FSELWIV 188
FSELWIV
Sbjct 187 FSELWIV 193
>6bzh_E E Probable ATP-dependent RNA helicase DDX58
Length=194
Score = 303 bits (775), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 143/187 (76%), Positives = 166/187 (89%), Gaps = 0/187 (0%)
Query 2 TTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFL 61
T EQR++LQAF+DYI+K LDPTYILSYM+ W +EEVQYIQAEKNNKGPMEAA+LFL++L
Sbjct 7 TAEQRQNLQAFRDYIKKILDPTYILSYMSSWLEDEEVQYIQAEKNNKGPMEAASLFLQYL 66
Query 62 LELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIPT 121
L+LQ EGWF+ FLDAL HAGY GL EAIESWDF+KIEKLEE+RLLL+RL+PEFK + P
Sbjct 67 LKLQSEGWFQAFLDALYHAGYCGLCEAIESWDFQKIEKLEEHRLLLRRLEPEFKATVDPN 126
Query 122 DIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERNK 181
DI+S+LSECLINQECEEI QI TKG MAGAEK+ ECL+RSDKENWPK L+LALEK+ +K
Sbjct 127 DILSELSECLINQECEEIRQIRDTKGRMAGAEKMAECLIRSDKENWPKVLQLALEKDNSK 186
Query 182 FSELWIV 188
FSELWIV
Sbjct 187 FSELWIV 193
>6bzh_A A Probable ATP-dependent RNA helicase DDX58
Length=194
Score = 303 bits (775), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 143/187 (76%), Positives = 166/187 (89%), Gaps = 0/187 (0%)
Query 2 TTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFL 61
T EQR++LQAF+DYI+K LDPTYILSYM+ W +EEVQYIQAEKNNKGPMEAA+LFL++L
Sbjct 7 TAEQRQNLQAFRDYIKKILDPTYILSYMSSWLEDEEVQYIQAEKNNKGPMEAASLFLQYL 66
Query 62 LELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIPT 121
L+LQ EGWF+ FLDAL HAGY GL EAIESWDF+KIEKLEE+RLLL+RL+PEFK + P
Sbjct 67 LKLQSEGWFQAFLDALYHAGYCGLCEAIESWDFQKIEKLEEHRLLLRRLEPEFKATVDPN 126
Query 122 DIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERNK 181
DI+S+LSECLINQECEEI QI TKG MAGAEK+ ECL+RSDKENWPK L+LALEK+ +K
Sbjct 127 DILSELSECLINQECEEIRQIRDTKGRMAGAEKMAECLIRSDKENWPKVLQLALEKDNSK 186
Query 182 FSELWIV 188
FSELWIV
Sbjct 187 FSELWIV 193
>6bzh_D D Probable ATP-dependent RNA helicase DDX58
Length=194
Score = 303 bits (775), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 143/187 (76%), Positives = 166/187 (89%), Gaps = 0/187 (0%)
Query 2 TTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFL 61
T EQR++LQAF+DYI+K LDPTYILSYM+ W +EEVQYIQAEKNNKGPMEAA+LFL++L
Sbjct 7 TAEQRQNLQAFRDYIKKILDPTYILSYMSSWLEDEEVQYIQAEKNNKGPMEAASLFLQYL 66
Query 62 LELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIPT 121
L+LQ EGWF+ FLDAL HAGY GL EAIESWDF+KIEKLEE+RLLL+RL+PEFK + P
Sbjct 67 LKLQSEGWFQAFLDALYHAGYCGLCEAIESWDFQKIEKLEEHRLLLRRLEPEFKATVDPN 126
Query 122 DIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERNK 181
DI+S+LSECLINQECEEI QI TKG MAGAEK+ ECL+RSDKENWPK L+LALEK+ +K
Sbjct 127 DILSELSECLINQECEEIRQIRDTKGRMAGAEKMAECLIRSDKENWPKVLQLALEKDNSK 186
Query 182 FSELWIV 188
FSELWIV
Sbjct 187 FSELWIV 193
>5jbj_A A LGP2
Length=680
Score = 319 bits (817), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 212/687 (31%), Positives = 348/687 (51%), Gaps = 54/687 (8%)
Query 245 NYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-KVVFFANQIPVY 303
YQLE PA++G+N+I+ PTG GKT ++ +C HL +G++G +V N++ +
Sbjct 11 GYQLEAVAPALRGRNSIVWLPTGAGKTRAAVHVCRRHL----EGRRGGRVAVLVNKVHLV 66
Query 304 EQQKSVFSKYFE--RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
+Q K F R ++VT +SG ++ Q+ + +D++I T QIL N L G
Sbjct 67 QQH---LEKEFHVLRDAFKVTAVSGDSSHKCFFGQLAKGSDVVICTAQILQNALLSGEEE 123
Query 362 S---LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418
+ L+ F+L++ DECH+T K+ YN IM +YL +KL G LPQ++GLTAS G G
Sbjct 124 ARVELTDFSLLVIDECHHTQKEAVYNKIMLSYLQKKLSGQR-DLPQILGLTASPGTGGET 182
Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 478
+ + A+++I ++CA+LD VIA+ R D F + ++
Sbjct 183 SFEGAVEHILQICANLDTEVIASAXXXXXXXXXXXXXXXXXXXXXXXREQDPFGQRLKKI 242
Query 479 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL 538
M +I + +E QN FGTQ YEQ IV ++ ++ E R C+
Sbjct 243 M-------AQIQEHMEMPELPQN--FGTQVYEQRIV---------ELENRAAE-RFCRKT 283
Query 539 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE 598
+ HLR+YNDAL+I++ RM DA L+ F+++ + D E+ L FEE L+
Sbjct 284 RVCALHLRRYNDALLINDTVRMMDAFQCLQQFYAD-KXXXXDPTERFLATTFEENRATLQ 342
Query 599 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKL--SFL 656
+++ D NP+L L ILQE + + I+F KTR +L +W++ L +
Sbjct 343 ALAGDQRYXNPRLSKLEEILQEHFQPPGSSRGIVFTKTRQSAHSLLSWLQDTAGLCGQHI 402
Query 657 KPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYE 716
+ +LTG G +NQ GMT Q+ ++ F+ G+ N+L +TSVA+EG+DI +CN+V+ Y
Sbjct 403 RAAVLTGSGHSNQAKGMTQNEQQDVITLFR-YGELNLLFSTSVAEEGLDIPECNIVVRYG 461
Query 717 YVGNVIKMIQTRGRGRARGSKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV 775
+ N I M+Q +GR RA+ S +L +N +M +I +Q E
Sbjct 462 LMTNEIAMVQAQGRARAQNSMYSVLAKANXXXXXXXXXXXXXXXLMERAIRAVQAMPERK 521
Query 776 FREKILHIQTHE------KFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEEC 829
+R KI+ +Q + K R S+ + PD + C C C +D+R +E
Sbjct 522 YRLKIVELQRNAVLSWQVKEARSSERRQLHDPD--DVYFHCVNCNVAVCRGSDIRTVEAM 579
Query 830 HYTVLGDAFKECFV---SRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPV 886
H+ + F+ + + H + + F +E +I C+ C +WG+ + Y+ +P+
Sbjct 580 HHVNINPNFRFYYTVSSGKIHFE-RTFRDWEPGCRIVCS--ECRQEWGMEMIYRNVTLPI 636
Query 887 IKIESFVVEDIATGVQTLYSKWKDFHF 913
+ I++FVV + + Y KW F
Sbjct 637 LSIKNFVV--VTPDEKKKYKKWSTVTF 661
>7nga_C A Interferon-induced helicase C domain-containing protein
1
Length=1025
Score = 320 bits (820), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 232/719 (32%), Positives = 356/719 (50%), Gaps = 79/719 (11%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302
R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ +
Sbjct 310 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 369
Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358
EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G
Sbjct 370 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 428
Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408
LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL
Sbjct 429 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGL 488
Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468
TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F
Sbjct 489 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIAXXXXX 548
Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528
+ FK + ++M ++ ++ +FGTQ YEQW + ++K D
Sbjct 549 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 594
Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579
+ + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F
Sbjct 595 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNXXXXX 648
Query 580 ---------------------DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFIL 618
DE ++ L F + + L+ ++ +P KL L +
Sbjct 649 XXXXXXXXXXXXXXXXXXXXLDETDEFLMNLFFDNKKMLKKLAENPKXXXEKLIKLRNTI 708
Query 619 QEEYHLNP-ETITILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTL 675
E++ + + I+F KTR AL WI N K + +K L G G +++ MT
Sbjct 709 LEQFTRSEXXSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQ 768
Query 676 PAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARG 735
QK ++ F+ +G+ N+LIAT+VA+EG+DI +CN+VI Y V RA
Sbjct 769 TEQKEVISKFR-TGEINLLIATTVAEEGLDIKECNIVIRYGLVTXXXXXXXXXXXARADE 827
Query 736 SKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIR 791
S L+T +E +N ++EKMM +I R+Q + KIL +Q EK ++
Sbjct 828 STYVLVTXXXXXXXXREIVNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMK 887
Query 792 DSQEKPKPVPDKENK-KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHP-K 849
+ K D + LLC+ C L C ++ VIE+ H+ + FK ++ R +
Sbjct 888 VKRSIAKQYNDNPSLITLLCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKXX 947
Query 850 PKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908
+I C C WG + +K ++P +KI +FVV + Y KW
Sbjct 948 XXXXXXXXXNGEIIC---KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKW 1003
>7bkq_A A Isoform 2 of Interferon-induced helicase C domain-containing
protein 1
Length=714
Score = 310 bits (794), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 228/719 (32%), Positives = 351/719 (49%), Gaps = 79/719 (11%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302
R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ +
Sbjct 4 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 63
Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358
EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G
Sbjct 64 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 122
Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408
LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL
Sbjct 123 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGL 182
Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468
TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + F
Sbjct 183 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKXXXXKFVIAXXXXX 242
Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528
+ FK + ++M ++ ++ +FGTQ YEQW + ++K D
Sbjct 243 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 288
Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579
+ + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F
Sbjct 289 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNDXXXX 342
Query 580 ---------------------DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFIL 618
DE ++ L F + + L+ ++ +P KL L +
Sbjct 343 XXXXXXXXXXXXXXXXXXXKLDETDEFLMNLFFDNKKMLKKLAENPXXXXEKLIKLRNTI 402
Query 619 QEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTL 675
E++ + + I+F KTR AL WI N K + +K L G G +++ MT
Sbjct 403 LEQFTRSXXSSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQ 462
Query 676 PAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARG 735
QK ++ F+ +G+ N+LIAT+VA+EG+DI +CN+VI Y
Sbjct 463 TEQKEVISKFR-TGEINLLIATTVAEEGLDIKECNIVIRYGLXXXXXXXXXXXXXXXXXX 521
Query 736 SKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIR 791
S L+T E+E +N ++EKMM +I R+Q + KIL +Q EK ++
Sbjct 522 STYVLVTXXXXXXXEREIVNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMK 581
Query 792 DSQEKPKPVPDKENK-KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHP-K 849
+ K D + LLC+ C L C ++ VIE+ H+ + FK ++ R +
Sbjct 582 VKRSIAKQYNDNPSLITLLCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKXX 641
Query 850 PKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908
+I C C WG + +K ++P +KI +FVV + Y KW
Sbjct 642 XXXXXXXXXNGEIIC---KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKW 697
>2rmj_A A Probable ATP-dependent RNA helicase DDX58
Length=134
Score = 285 bits (730), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 134/134 (100%), Positives = 134/134 (100%), Gaps = 0/134 (0%)
Query 792 DSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPK 851
DSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPK
Sbjct 1 DSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPK 60
Query 852 QFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDF 911
QFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDF
Sbjct 61 QFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDF 120
Query 912 HFEKIPFDPAEMSK 925
HFEKIPFDPAEMSK
Sbjct 121 HFEKIPFDPAEMSK 134
>3og8_B B Antiviral innate immune response receptor RIG-I
Length=128
Score = 262 bits (669), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 123/124 (99%), Positives = 123/124 (99%), Gaps = 0/124 (0%)
Query 802 DKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAK 861
DKENKKLLCRKCKALACYTADVRVIEE HYTVLGDAFKECFVSRPHPKPKQFSSFEKRAK
Sbjct 2 DKENKKLLCRKCKALACYTADVRVIEESHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAK 61
Query 862 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA 921
IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA
Sbjct 62 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA 121
Query 922 EMSK 925
EMSK
Sbjct 122 EMSK 125
>7bah_B B Antiviral innate immune response receptor RIG-I
Length=127
Score = 261 bits (667), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 122/122 (100%), Positives = 122/122 (100%), Gaps = 0/122 (0%)
Query 802 DKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAK 861
DKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAK
Sbjct 4 DKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAK 63
Query 862 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA 921
IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA
Sbjct 64 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA 123
Query 922 EM 923
EM
Sbjct 124 EM 125
>3og8_A A Antiviral innate immune response receptor RIG-I
Length=128
Score = 259 bits (663), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 122/123 (99%), Positives = 122/123 (99%), Gaps = 0/123 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEE HYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 3 KENKKLLCRKCKALACYTADVRVIEESHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 62
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 63 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 122
Query 923 MSK 925
MSK
Sbjct 123 MSK 125
>7mk1_B B Antiviral innate immune response receptor RIG-I
Length=125
Score = 259 bits (662), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 3 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 62
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 63 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 122
Query 923 M 923
M
Sbjct 123 M 123
>7mk1_A A Antiviral innate immune response receptor RIG-I
Length=125
Score = 259 bits (662), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 3 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 62
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 63 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 122
Query 923 M 923
M
Sbjct 123 M 123
>7bah_A A Antiviral innate immune response receptor RIG-I
Length=127
Score = 259 bits (662), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 5 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 64
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 65 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 124
Query 923 M 923
M
Sbjct 125 M 125
>7bai_B B Antiviral innate immune response receptor RIG-I
Length=127
Score = 259 bits (661), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 802 DKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAK 861
DKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAK
Sbjct 4 DKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAK 63
Query 862 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA 921
IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA
Sbjct 64 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA 123
Query 922 E 922
E
Sbjct 124 E 124
>2qfd_A A Probable ATP-dependent RNA helicase DDX58
Length=145
Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142
Query 923 M 923
M
Sbjct 143 M 143
>2qfb_J J Probable ATP-dependent RNA helicase DDX58
Length=145
Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142
Query 923 M 923
M
Sbjct 143 M 143
>2qfb_I I Probable ATP-dependent RNA helicase DDX58
Length=145
Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142
Query 923 M 923
M
Sbjct 143 M 143
>2qfb_H H Probable ATP-dependent RNA helicase DDX58
Length=145
Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142
Query 923 M 923
M
Sbjct 143 M 143
>2qfb_G G Probable ATP-dependent RNA helicase DDX58
Length=145
Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142
Query 923 M 923
M
Sbjct 143 M 143
>2qfb_F F Probable ATP-dependent RNA helicase DDX58
Length=145
Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142
Query 923 M 923
M
Sbjct 143 M 143
>2qfb_E E Probable ATP-dependent RNA helicase DDX58
Length=145
Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142
Query 923 M 923
M
Sbjct 143 M 143
>2qfb_D D Probable ATP-dependent RNA helicase DDX58
Length=145
Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142
Query 923 M 923
M
Sbjct 143 M 143
>2qfb_C C Probable ATP-dependent RNA helicase DDX58
Length=145
Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142
Query 923 M 923
M
Sbjct 143 M 143
>2qfd_J J Probable ATP-dependent RNA helicase DDX58
Length=145
Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142
Query 923 M 923
M
Sbjct 143 M 143
>2qfd_I I Probable ATP-dependent RNA helicase DDX58
Length=145
Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142
Query 923 M 923
M
Sbjct 143 M 143
>2qfd_H H Probable ATP-dependent RNA helicase DDX58
Length=145
Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142
Query 923 M 923
M
Sbjct 143 M 143
>2qfd_G G Probable ATP-dependent RNA helicase DDX58
Length=145
Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142
Query 923 M 923
M
Sbjct 143 M 143
>2qfd_B B Probable ATP-dependent RNA helicase DDX58
Length=145
Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142
Query 923 M 923
M
Sbjct 143 M 143
>2qfd_F F Probable ATP-dependent RNA helicase DDX58
Length=145
Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142
Query 923 M 923
M
Sbjct 143 M 143
>2qfd_E E Probable ATP-dependent RNA helicase DDX58
Length=145
Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142
Query 923 M 923
M
Sbjct 143 M 143
>2qfd_D D Probable ATP-dependent RNA helicase DDX58
Length=145
Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142
Query 923 M 923
M
Sbjct 143 M 143
>2qfd_C C Probable ATP-dependent RNA helicase DDX58
Length=145
Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142
Query 923 M 923
M
Sbjct 143 M 143
>2qfb_B B Probable ATP-dependent RNA helicase DDX58
Length=145
Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142
Query 923 M 923
M
Sbjct 143 M 143
>2qfb_A A Probable ATP-dependent RNA helicase DDX58
Length=145
Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142
Query 923 M 923
M
Sbjct 143 M 143
>7bai_A A Antiviral innate immune response receptor RIG-I
Length=127
Score = 258 bits (658), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 120/120 (100%), Positives = 120/120 (100%), Gaps = 0/120 (0%)
Query 804 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIF 863
ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIF
Sbjct 6 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIF 65
Query 864 CARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM 923
CARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM
Sbjct 66 CARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM 125
>3ncu_B B RIG-I
Length=134
Score = 258 bits (658), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 120/120 (100%), Positives = 120/120 (100%), Gaps = 0/120 (0%)
Query 804 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIF 863
ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIF
Sbjct 13 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIF 72
Query 864 CARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM 923
CARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM
Sbjct 73 CARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM 132
>3ncu_A A RIG-I
Length=134
Score = 258 bits (658), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 120/120 (100%), Positives = 120/120 (100%), Gaps = 0/120 (0%)
Query 804 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIF 863
ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIF
Sbjct 13 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIF 72
Query 864 CARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM 923
CARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM
Sbjct 73 CARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM 132
>3lrr_B B Probable ATP-dependent RNA helicase DDX58
Length=121
Score = 256 bits (653), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 120/121 (99%), Positives = 120/121 (99%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEE HYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 1 KENKKLLCRKCKALACYTADVRVIEESHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 60
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 61 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 120
Query 923 M 923
M
Sbjct 121 M 121
>3lrr_A A Probable ATP-dependent RNA helicase DDX58
Length=121
Score = 256 bits (653), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 120/121 (99%), Positives = 120/121 (99%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEE HYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 1 KENKKLLCRKCKALACYTADVRVIEESHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 60
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 61 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 120
Query 923 M 923
M
Sbjct 121 M 121
>3lrn_A A Probable ATP-dependent RNA helicase DDX58
Length=121
Score = 256 bits (653), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 120/121 (99%), Positives = 120/121 (99%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEE HYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 1 KENKKLLCRKCKALACYTADVRVIEESHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 60
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 61 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 120
Query 923 M 923
M
Sbjct 121 M 121
>3lrn_B B Probable ATP-dependent RNA helicase DDX58
Length=121
Score = 256 bits (653), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 120/121 (99%), Positives = 120/121 (99%), Gaps = 0/121 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEE HYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 1 KENKKLLCRKCKALACYTADVRVIEESHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 60
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE
Sbjct 61 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 120
Query 923 M 923
M
Sbjct 121 M 121
>7bai_E E Antiviral innate immune response receptor RIG-I
Length=127
Score = 255 bits (651), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 119/119 (100%), Positives = 119/119 (100%), Gaps = 0/119 (0%)
Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862
KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI
Sbjct 5 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 64
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA 921
FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA
Sbjct 65 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA 123
>8t5s_A A Dicer-related helicase
Length=1091
Score = 256 bits (653), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 212/734 (29%), Positives = 350/734 (48%), Gaps = 79/734 (11%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSL-LICEHHLKKFPQGQKGKVVFFANQIPV 302
RNYQ EL A++GKNTI+ APTG GKT ++ +I EH + +G++ K +F +
Sbjct 348 RNYQEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSMI 407
Query 303 YEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN--NLKKGTI 360
QQ + S Y + H Y I G+ +NVP ++++ D+I+ TPQ++VN N + ++
Sbjct 408 LNQQAASISSYLD-HVYHTQIIQGS--DNVPTRNVIQSKDLIVATPQMIVNLCNEHRNSL 464
Query 361 PS--------LSIFTLMIFDECHNTSKQHPYNMIM--FNYLDQKLGGSSG-PLPQVIGLT 409
LS FT++ FDECHNT K PY+ IM ++YL G LPQ+IGLT
Sbjct 465 DXXSRLDQFFLSTFTIIFFDECHNTVKNSPYSNIMREYHYLKNMGNMPEGHSLPQIIGLT 524
Query 410 ASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVV-YKPQKFF---RKVES 465
AS+G GD + + +YI LCAS+D ++ VK NLEEL P K R +
Sbjct 525 ASLGTGDKNDCLQVRNYIAGLCASMDVKDLSIVKDNLEELRGYSPIVPDKVLLCERSTDG 584
Query 466 RISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMV--F 523
I F + +M++ E L + + ++N G F
Sbjct 585 PIG-MFTNRLTLMMQEVEGLIR---------TALRNEHIGXXXXXXXXXXXXXXXXXXSF 634
Query 524 QMPDKDEE-----SRICKALFLYT-SHLRKYNDALIISEHARM----------------K 561
P D+E + +C + L + + R+ II+E + +
Sbjct 635 LDPPADKEHAGYQNWVCNQMNLVSGTSFRETGTRTIINEALDVLKECFCTLSYNINFHPE 694
Query 562 DALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEE 621
AL+YLKD R F + +R+ +L S ENP + + E+
Sbjct 695 VALNYLKDEME-YRTPNFTVNMIRIWERYHNQLVGTGSA------ENPMISKTVQYIVEQ 747
Query 622 YHLNPETITILFVKTRALVDALKNWIEGNPKLSFL--KPGILTGRGKTNQNTGMTLPAQK 679
++ TI+FV+TR L + N +L L K ++G K+ ++ +++
Sbjct 748 NLQRADSRTIIFVRTRYEATILNKVLNSNEELLMLGIKSEWMSGLNKSTASSADISASKQ 807
Query 680 CILDAFK--ASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSK 737
++ K A G+ IL++TSVA+EG+D+ +C+LVI Y Y N I +Q RGRGRA S+
Sbjct 808 KQMEKLKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYATNEIAHVQRRGRGRALNSE 867
Query 738 CFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHE---KFIRDSQ 794
C L+T++ + ++E N KE +M+++I +Q A FR K + ++++ + +R+
Sbjct 868 CVLITNSIALRDQESNNRDKESLMSETISLIQN-SPAEFR-KCVDEESNKIWPRILREDT 925
Query 795 EKPKPVPDKENK----KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFV-SRPHPK 849
+K + + ++ N+ K++C+KC+A+ C + D+R Y V F +R
Sbjct 926 DKAQKIEEQINRNIVYKIICKKCEAILCTSKDIRS-RNTQYLVCDPGFWSLVRKTRXXXX 984
Query 850 PKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWK 909
I C R+NC G ++ T ++P + S V+ T + + KWK
Sbjct 985 XXXXXXXXXTGSINCRRENCGLKLGQLIEVNTVDLPCLSALSIVLLVEGTDKRIIVKKWK 1044
Query 910 DFHFEKIPFDPAEM 923
+ +K F P E+
Sbjct 1045 NI-LDKY-FTPTEI 1056
>2lwd_A A Probable ATP-dependent RNA helicase DDX58
Length=100
Score = 192 bits (488), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 96/96 (100%), Positives = 96/96 (100%), Gaps = 0/96 (0%)
Query 95 KKIEKLEEYRLLLKRLQPEFKTRIIPTDIISDLSECLINQECEEILQICSTKGMMAGAEK 154
KKIEKLEEYRLLLKRLQPEFKTRIIPTDIISDLSECLINQECEEILQICSTKGMMAGAEK
Sbjct 5 KKIEKLEEYRLLLKRLQPEFKTRIIPTDIISDLSECLINQECEEILQICSTKGMMAGAEK 64
Query 155 LVECLLRSDKENWPKTLKLALEKERNKFSELWIVEK 190
LVECLLRSDKENWPKTLKLALEKERNKFSELWIVEK
Sbjct 65 LVECLLRSDKENWPKTLKLALEKERNKFSELWIVEK 100
>2lwe_A A Probable ATP-dependent RNA helicase DDX58
Length=100
Score = 189 bits (481), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 95/96 (99%), Positives = 95/96 (99%), Gaps = 0/96 (0%)
Query 95 KKIEKLEEYRLLLKRLQPEFKTRIIPTDIISDLSECLINQECEEILQICSTKGMMAGAEK 154
KKIEKLEEYRLLLKRLQPEFKTRIIPTDIISDLSECLINQECEEILQICSTKGMMAGAEK
Sbjct 5 KKIEKLEEYRLLLKRLQPEFKTRIIPTDIISDLSECLINQECEEILQICSTKGMMAGAEK 64
Query 155 LVECLLRSDKENWPKTLKLALEKERNKFSELWIVEK 190
LVECLLRSDKENWPK LKLALEKERNKFSELWIVEK
Sbjct 65 LVECLLRSDKENWPKELKLALEKERNKFSELWIVEK 100
>4a2x_C C RETINOIC ACID INDUCIBLE PROTEIN I
Length=131
Score = 134 bits (336), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 63/120 (53%), Positives = 82/120 (68%), Gaps = 1/120 (1%)
Query 806 KKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIFCA 865
K LLC KCKA AC T D+R+I++ H+ VLG+AFKE + ++PH KP QF FEK++K++C
Sbjct 6 KNLLCGKCKAYACSTDDIRIIKDSHHIVLGEAFKERYTTKPHKKPMQFDGFEKKSKMYCR 65
Query 866 RQNCSHDWGIHVKYKTFE-IPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEMS 924
NC HDWGI VKY TF+ +PVIKI+SFV+E Q + KWK + FD EMS
Sbjct 66 NNNCQHDWGITVKYLTFDNLPVIKIKSFVMESXXXXXQMDFQKWKSINSSLKNFDVEEMS 125
>4a2x_B B RETINOIC ACID INDUCIBLE PROTEIN I
Length=131
Score = 134 bits (336), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 63/120 (53%), Positives = 82/120 (68%), Gaps = 1/120 (1%)
Query 806 KKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIFCA 865
K LLC KCKA AC T D+R+I++ H+ VLG+AFKE + ++PH KP QF FEK++K++C
Sbjct 6 KNLLCGKCKAYACSTDDIRIIKDSHHIVLGEAFKERYTTKPHKKPMQFDGFEKKSKMYCR 65
Query 866 RQNCSHDWGIHVKYKTFE-IPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEMS 924
NC HDWGI VKY TF+ +PVIKI+SFV+E Q + KWK + FD EMS
Sbjct 66 NNNCQHDWGITVKYLTFDNLPVIKIKSFVMESXXXXXQMDFQKWKSINSSLKNFDVEEMS 125
>4a2x_A A RETINOIC ACID INDUCIBLE PROTEIN I
Length=131
Score = 134 bits (336), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 63/120 (53%), Positives = 82/120 (68%), Gaps = 1/120 (1%)
Query 806 KKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIFCA 865
K LLC KCKA AC T D+R+I++ H+ VLG+AFKE + ++PH KP QF FEK++K++C
Sbjct 6 KNLLCGKCKAYACSTDDIRIIKDSHHIVLGEAFKERYTTKPHKKPMQFDGFEKKSKMYCR 65
Query 866 RQNCSHDWGIHVKYKTFE-IPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEMS 924
NC HDWGI VKY TF+ +PVIKI+SFV+E Q + KWK + FD EMS
Sbjct 66 NNNCQHDWGITVKYLTFDNLPVIKIKSFVMESXXXXXQMDFQKWKSINSSLKNFDVEEMS 125
>4a2x_D D RETINOIC ACID INDUCIBLE PROTEIN I
Length=131
Score = 134 bits (336), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 63/120 (53%), Positives = 82/120 (68%), Gaps = 1/120 (1%)
Query 806 KKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIFCA 865
K LLC KCKA AC T D+R+I++ H+ VLG+AFKE + ++PH KP QF FEK++K++C
Sbjct 6 KNLLCGKCKAYACSTDDIRIIKDSHHIVLGEAFKERYTTKPHKKPMQFDGFEKKSKMYCR 65
Query 866 RQNCSHDWGIHVKYKTFE-IPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEMS 924
NC HDWGI VKY TF+ +PVIKI+SFV+E Q + KWK + FD EMS
Sbjct 66 NNNCQHDWGITVKYLTFDNLPVIKIKSFVMESXXXXXQMDFQKWKSINSSLKNFDVEEMS 125
>4a2v_A A RETINOIC ACID INDUCIBLE PROTEIN I
Length=131
Score = 133 bits (334), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 63/120 (53%), Positives = 82/120 (68%), Gaps = 1/120 (1%)
Query 806 KKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIFCA 865
K LLC KCKA AC T D+R+I++ H+ VLG+AFKE + ++PH KP QF FEK++K++C
Sbjct 6 KNLLCGKCKAYACSTDDIRIIKDSHHIVLGEAFKERYTTKPHKKPMQFDGFEKKSKMYCR 65
Query 866 RQNCSHDWGIHVKYKTFE-IPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEMS 924
NC HDWGI VKY TF+ +PVIKI+SFV+E Q + KWK + FD EMS
Sbjct 66 NNNCQHDWGITVKYLTFDNLPVIKIKSFVMESXXXXXQMDFQKWKSINSSLKNFDVEEMS 125
>1wp9_A A ATP-dependent RNA helicase, putative
Length=494
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 132/515 (26%), Positives = 224/515 (43%), Gaps = 57/515 (11%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
+PR YQ E+ K N +I PTG GKT ++++I E+ L K+ GKV+ A
Sbjct 8 IQPRIYQ-EVIYAKCKETNCLIVLPTGLGKTLIAMMIAEYRLTKY----GGKVLMLAPTK 62
Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQ--IVENNDIIILTPQILVNNLKKG 358
P+ Q F + F ++ ++G E P E+ +I+ TPQ + N+L G
Sbjct 63 PLVLQHAESFRRLFNLPPEKIVALTG---EKSPEERSKAWARAKVIVATPQTIENDLLAG 119
Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418
I SL +L++FDE H + Y I Y Q + PL VIGLTAS G K
Sbjct 120 RI-SLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQ----AKNPL--VIGLTASPGSTPEK 172
Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVE-SRISDKFKYIIAQ 477
I ++ +L I N ++ V + + +V+ I + + ++ +
Sbjct 173 --------IMEVINNLGIEHIEYRSENSPDVRPYVKGIRFEWVRVDLPEIYKEVRKLLRE 224
Query 478 LMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVF--QMPDKDEESRIC 535
++RD K L +++ K E V +A + +M + + R
Sbjct 225 MLRDA-------LKPLAETGLLESSSPDIPKKE-----VLRAGQIINEEMAKGNHDLR-- 270
Query 536 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 595
L LY + K + A+ + E + Y+K + +A ++ + + +K
Sbjct 271 -GLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAGSTKASKEIFSDKRMKKAI 329
Query 596 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 655
L +++ ++PK++ L I++E+ + I+F R + N
Sbjct 330 SLLVQAKEIGLDHPKMDKLKEIIREQLQRKQNSKIIVFTNYRETAKKIVN--------EL 381
Query 656 LKPGI----LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNL 711
+K GI G+ QK ILD F A G+ N+L+ATSV +EG+D+ + +L
Sbjct 382 VKDGIKAKRFVGQASKXXXXXXXQREQKLILDEF-ARGEFNVLVATSVGEEGLDVPEVDL 440
Query 712 VILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNA 745
V+ YE V + I+ IQ RGR GR + +L +
Sbjct 441 VVFYEPVPSAIRSIQRRGRTGRHMPGRVIILMAKG 475
>1wp9_B B ATP-dependent RNA helicase, putative
Length=494
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 132/515 (26%), Positives = 224/515 (43%), Gaps = 57/515 (11%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
+PR YQ E+ K N +I PTG GKT ++++I E+ L K+ GKV+ A
Sbjct 8 IQPRIYQ-EVIYAKCKETNCLIVLPTGLGKTLIAMMIAEYRLTKY----GGKVLMLAPTK 62
Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQ--IVENNDIIILTPQILVNNLKKG 358
P+ Q F + F ++ ++G E P E+ +I+ TPQ + N+L G
Sbjct 63 PLVLQHAESFRRLFNLPPEKIVALTG---EKSPEERSKAWARAKVIVATPQTIENDLLAG 119
Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418
I SL +L++FDE H + Y I Y Q + PL VIGLTAS G K
Sbjct 120 RI-SLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQ----AKNPL--VIGLTASPGSTPEK 172
Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVE-SRISDKFKYIIAQ 477
I ++ +L I N ++ V + + +V+ I + + ++ +
Sbjct 173 --------IMEVINNLGIEHIEYRSENSPDVRPYVKGIRFEWVRVDLPEIYKEVRKLLRE 224
Query 478 LMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVF--QMPDKDEESRIC 535
++RD K L +++ K E V +A + +M + + R
Sbjct 225 MLRDA-------LKPLAETGLLESSSPDIPKKE-----VLRAGQIINEEMAKGNHDLR-- 270
Query 536 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 595
L LY + K + A+ + E + Y+K + +A ++ + + +K
Sbjct 271 -GLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAGSTKASKEIFSDKRMKKAI 329
Query 596 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 655
L +++ ++PK++ L I++E+ + I+F R + N
Sbjct 330 SLLVQAKEIGLDHPKMDKLKEIIREQLQRKQNSKIIVFTNYRETAKKIVN--------EL 381
Query 656 LKPGI----LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNL 711
+K GI G + QK ILD F A G+ N+L+ATSV +EG+D+ + +L
Sbjct 382 VKDGIKAKRFVGXXXXXXXXXXSQREQKLILDEF-ARGEFNVLVATSVGEEGLDVPEVDL 440
Query 712 VILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNA 745
V+ YE V + I+ IQ RGR GR + +L +
Sbjct 441 VVFYEPVPSAIRSIQRRGRTGRHMPGRVIILMAKG 475
>3b6e_A A Interferon-induced helicase C domain-containing protein
1
Length=216
Score = 119 bits (297), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/185 (42%), Positives = 105/185 (57%), Gaps = 20/185 (11%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302
R YQ+E+A PA++GKN IIC PTG GKT V++ I + HL KK + GKV+ N++ +
Sbjct 35 RPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLL 94
Query 303 YEQQKSVFSKYFE---RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
EQ +F K F+ + YRV G+SG + ++V++ DIII T QIL N+L
Sbjct 95 VEQ---LFRKEFQPFLKKWYRVIGLSGXXXLKISFPEVVKSCDIIISTAQILENSLLNXX 151
Query 360 IP-----SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVI 406
LS F+L+I DEC YN IM +YL QKL + PLPQ++
Sbjct 152 XXXXXGVQLSDFSLIIIDECXXXXXXXVYNNIMRHYLMQKLKNNRLKKENKPVIPLPQIL 211
Query 407 GLTAS 411
GLTAS
Sbjct 212 GLTAS 216
>1wp9_F F ATP-dependent RNA helicase, putative
Length=494
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 132/515 (26%), Positives = 223/515 (43%), Gaps = 57/515 (11%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
+PR YQ E+ K N +I PTG GKT ++++I E+ L K+ GKV+ A
Sbjct 8 IQPRIYQ-EVIYAKCKETNCLIVLPTGLGKTLIAMMIAEYRLTKY----GGKVLMLAPTK 62
Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQ--IVENNDIIILTPQILVNNLKKG 358
P+ Q F + F ++ ++G E P E+ +I+ TPQ + N+L G
Sbjct 63 PLVLQHAESFRRLFNLPPEKIVALTG---EKSPEERSKAWARAKVIVATPQTIENDLLAG 119
Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418
I SL +L++FDE H + Y I Y Q + PL VIGLTAS G K
Sbjct 120 RI-SLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQ----AKNPL--VIGLTASPGSTPEK 172
Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVE-SRISDKFKYIIAQ 477
I ++ +L I N ++ V + + +V+ I + + ++ +
Sbjct 173 --------IMEVINNLGIEHIEYRSENSPDVRPYVKGIRFEWVRVDLPEIYKEVRKLLRE 224
Query 478 LMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVF--QMPDKDEESRIC 535
++RD K L +++ K E V +A + +M + + R
Sbjct 225 MLRDA-------LKPLAETGLLESSSPDIPKKE-----VLRAGQIINEEMAKGNHDLR-- 270
Query 536 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 595
L LY + K + A+ + E + Y+K + +A ++ + + +K
Sbjct 271 -GLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAGSTKASKEIFSDKRMKKAI 329
Query 596 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 655
L +++ ++PK++ L I++E+ + I+F R + N
Sbjct 330 SLLVQAKEIGLDHPKMDKLKEIIREQLQRKQNSKIIVFTNYRETAKKIVN--------EL 381
Query 656 LKPGILTGR----GKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNL 711
+K GI R QK ILD F A G+ N+L+ATSV +EG+D+ + +L
Sbjct 382 VKDGIKAKRFVXXXXXXXXXXXXQREQKLILDEF-ARGEFNVLVATSVGEEGLDVPEVDL 440
Query 712 VILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNA 745
V+ YE V + I+ IQ RGR GR + +L +
Sbjct 441 VVFYEPVPSAIRSIQRRGRTGRHMPGRVIILMAKG 475
>1wp9_E E ATP-dependent RNA helicase, putative
Length=494
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 132/515 (26%), Positives = 223/515 (43%), Gaps = 57/515 (11%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
+PR YQ E+ K N +I PTG GKT ++++I E+ L K+ GKV+ A
Sbjct 8 IQPRIYQ-EVIYAKCKETNCLIVLPTGLGKTLIAMMIAEYRLTKY----GGKVLMLAPTK 62
Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQ--IVENNDIIILTPQILVNNLKKG 358
P+ Q F + F ++ ++G E P E+ +I+ TPQ + N+L G
Sbjct 63 PLVLQHAESFRRLFNLPPEKIVALTG---EKSPEERSKAWARAKVIVATPQTIENDLLAG 119
Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418
I SL +L++FDE H + Y I Y Q + PL VIGLTAS G K
Sbjct 120 RI-SLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQ----AKNPL--VIGLTASPGSTPEK 172
Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVE-SRISDKFKYIIAQ 477
I ++ +L I N ++ V + + +V+ I + + ++ +
Sbjct 173 --------IMEVINNLGIEHIEYRSENSPDVRPYVKGIRFEWVRVDLPEIYKEVRKLLRE 224
Query 478 LMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVF--QMPDKDEESRIC 535
++RD K L +++ K E V +A + +M + + R
Sbjct 225 MLRDA-------LKPLAETGLLESSSPDIPKKE-----VLRAGQIINEEMAKGNHDLR-- 270
Query 536 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 595
L LY + K + A+ + E + Y+K + +A ++ + + +K
Sbjct 271 -GLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAGSTKASKEIFSDKRMKKAI 329
Query 596 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 655
L +++ ++PK++ L I++E+ + I+F R + N
Sbjct 330 SLLVQAKEIGLDHPKMDKLKEIIREQLQRKQNSKIIVFTNYRETAKKIVN--------EL 381
Query 656 LKPGILTGR----GKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNL 711
+K GI R QK ILD F A G+ N+L+ATSV +EG+D+ + +L
Sbjct 382 VKDGIKAKRFVXXXXXXXXXXXXQREQKLILDEF-ARGEFNVLVATSVGEEGLDVPEVDL 440
Query 712 VILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNA 745
V+ YE V + I+ IQ RGR GR + +L +
Sbjct 441 VVFYEPVPSAIRSIQRRGRTGRHMPGRVIILMAKG 475
>1wp9_C C ATP-dependent RNA helicase, putative
Length=494
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 132/515 (26%), Positives = 223/515 (43%), Gaps = 57/515 (11%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
+PR YQ E+ K N +I PTG GKT ++++I E+ L K+ GKV+ A
Sbjct 8 IQPRIYQ-EVIYAKCKETNCLIVLPTGLGKTLIAMMIAEYRLTKY----GGKVLMLAPTK 62
Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQ--IVENNDIIILTPQILVNNLKKG 358
P+ Q F + F ++ ++G E P E+ +I+ TPQ + N+L G
Sbjct 63 PLVLQHAESFRRLFNLPPEKIVALTG---EKSPEERSKAWARAKVIVATPQTIENDLLAG 119
Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418
I SL +L++FDE H + Y I Y Q + PL VIGLTAS G K
Sbjct 120 RI-SLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQ----AKNPL--VIGLTASPGSTPEK 172
Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVE-SRISDKFKYIIAQ 477
I ++ +L I N ++ V + + +V+ I + + ++ +
Sbjct 173 --------IMEVINNLGIEHIEYRSENSPDVRPYVKGIRFEWVRVDLPEIYKEVRKLLRE 224
Query 478 LMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVF--QMPDKDEESRIC 535
++RD K L +++ K E V +A + +M + + R
Sbjct 225 MLRDA-------LKPLAETGLLESSSPDIPKKE-----VLRAGQIINEEMAKGNHDLR-- 270
Query 536 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 595
L LY + K + A+ + E + Y+K + +A ++ + + +K
Sbjct 271 -GLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAGSTKASKEIFSDKRMKKAI 329
Query 596 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 655
L +++ ++PK++ L I++E+ + I+F R + N
Sbjct 330 SLLVQAKEIGLDHPKMDKLKEIIREQLQRKQNSKIIVFTNYRETAKKIVN--------EL 381
Query 656 LKPGILTGR----GKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNL 711
+K GI R QK ILD F A G+ N+L+ATSV +EG+D+ + +L
Sbjct 382 VKDGIKAKRFVXXXXXXXXXXXXQREQKLILDEF-ARGEFNVLVATSVGEEGLDVPEVDL 440
Query 712 VILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNA 745
V+ YE V + I+ IQ RGR GR + +L +
Sbjct 441 VVFYEPVPSAIRSIQRRGRTGRHMPGRVIILMAKG 475
>1wp9_D D ATP-dependent RNA helicase, putative
Length=494
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 132/515 (26%), Positives = 223/515 (43%), Gaps = 57/515 (11%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300
+PR YQ E+ K N +I PTG GKT ++++I E+ L K+ GKV+ A
Sbjct 8 IQPRIYQ-EVIYAKCKETNCLIVLPTGLGKTLIAMMIAEYRLTKY----GGKVLMLAPTK 62
Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQ--IVENNDIIILTPQILVNNLKKG 358
P+ Q F + F ++ ++G E P E+ +I+ TPQ + N+L G
Sbjct 63 PLVLQHAESFRRLFNLPPEKIVALTG---EKSPEERSKAWARAKVIVATPQTIENDLLAG 119
Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418
I SL +L++FDE H + Y I Y Q + PL VIGLTAS G K
Sbjct 120 RI-SLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQ----AKNPL--VIGLTASPGSTPEK 172
Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVE-SRISDKFKYIIAQ 477
I ++ +L I N ++ V + + +V+ I + + ++ +
Sbjct 173 --------IMEVINNLGIEHIEYRSENSPDVRPYVKGIRFEWVRVDLPEIYKEVRKLLRE 224
Query 478 LMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVF--QMPDKDEESRIC 535
++RD K L +++ K E V +A + +M + + R
Sbjct 225 MLRDA-------LKPLAETGLLESSSPDIPKKE-----VLRAGQIINEEMAKGNHDLR-- 270
Query 536 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 595
L LY + K + A+ + E + Y+K + +A ++ + + +K
Sbjct 271 -GLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAXXXKASKEIFSDKRMKKAI 329
Query 596 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 655
L +++ ++PK++ L I++E+ + I+F R + N
Sbjct 330 SLLVQAKEIGLDHPKMDKLKEIIREQLQRKQNSKIIVFTNYRETAKKIVN--------EL 381
Query 656 LKPGILTGR----GKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNL 711
+K GI R QK ILD F A G+ N+L+ATSV +EG+D+ + +L
Sbjct 382 VKDGIKAKRFXXXXXXXXXXXXXXREQKLILDEF-ARGEFNVLVATSVGEEGLDVPEVDL 440
Query 712 VILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNA 745
V+ YE V + I+ IQ RGR GR + +L +
Sbjct 441 VVFYEPVPSAIRSIQRRGRTGRHMPGRVIILMAKG 475
>4i1s_A A Melanoma differentiation associated protein-5
Length=267
Score = 114 bits (285), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/228 (34%), Positives = 121/228 (53%), Gaps = 23/228 (10%)
Query 503 EFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKD 562
+FGTQ YEQW++ ++K D + + R+C HL+KYN+AL I++ R D
Sbjct 26 DFGTQPYEQWLIQMEKKAA----RDGNRKDRVC------AEHLKKYNEALQINDTIRRID 75
Query 563 ALDYLKDFFSNVRAAGF---------DEIEQDLTQRFEEKLQELESVSRDPSNENPKLED 613
A ++LK F+++ + F DE + L F + L+ ++ +P EN KL
Sbjct 76 AYNHLKTFYNDEKEKKFEXXXXXGSLDESDIFLMTLFLRNKKILKKLAENPEYENEKLTK 135
Query 614 LCFILQEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQN 670
L + E + E+ I+F KTR AL WI N K + +K L G G +++
Sbjct 136 LRNTIMEHFTRTEESARGIIFTKTRQSAYALSQWITDNKKFAEVGVKAHHLIGAGHSSEF 195
Query 671 TGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYV 718
MT Q+ ++ F+ +G N+LIAT+VA+EG+DI +CN+VI Y V
Sbjct 196 KPMTQNEQREVISKFR-TGKINLLIATTVAEEGLDIKECNIVIRYGLV 242
>7w0e_C A Dicer-2, isoform A
Length=1722
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298
KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N
Sbjct 7 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 65
Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355
+ + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ +
Sbjct 66 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 123
Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411
+ T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT
Sbjct 124 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 176
Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448
+ V D K + + Y A+ V+ + H
Sbjct 177 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 228
Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500
EQV+ + ++E +S I Q +R ++SL K K L N Q
Sbjct 229 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 287
Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560
+E+G I+++ + F + + E+ K + + AL + E R
Sbjct 288 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 335
Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614
+ L+D + + +E+ + + QRF L S+ ++++PK D+
Sbjct 336 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 386
Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669
C ++FV+ R + L N+I+ P+L + L P + GR +
Sbjct 387 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 432
Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727
+ L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+
Sbjct 433 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 491
Query 728 RGRGRARGSKCFLLTSN 744
+GR R +K L T++
Sbjct 492 KGRARTTEAKFVLFTAD 508
>7w0f_A A Dicer-2, isoform A
Length=1722
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298
KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N
Sbjct 7 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 65
Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355
+ + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ +
Sbjct 66 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 123
Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411
+ T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT
Sbjct 124 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 176
Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448
+ V D K + + Y A+ V+ + H
Sbjct 177 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 228
Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500
EQV+ + ++E +S I Q +R ++SL K K L N Q
Sbjct 229 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 287
Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560
+E+G I+++ + F + + E+ K + + AL + E R
Sbjct 288 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 335
Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614
+ L+D + + +E+ + + QRF L S+ ++++PK D+
Sbjct 336 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 386
Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669
C ++FV+ R + L N+I+ P+L + L P + GR +
Sbjct 387 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 432
Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727
+ L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+
Sbjct 433 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 491
Query 728 RGRGRARGSKCFLLTSN 744
+GR R +K L T++
Sbjct 492 KGRARTTEAKFVLFTAD 508
>7w0d_D A Dicer-2, isoform A
Length=1722
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298
KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N
Sbjct 7 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 65
Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355
+ + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ +
Sbjct 66 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 123
Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411
+ T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT
Sbjct 124 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 176
Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448
+ V D K + + Y A+ V+ + H
Sbjct 177 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 228
Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500
EQV+ + ++E +S I Q +R ++SL K K L N Q
Sbjct 229 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 287
Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560
+E+G I+++ + F + + E+ K + + AL + E R
Sbjct 288 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 335
Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614
+ L+D + + +E+ + + QRF L S+ ++++PK D+
Sbjct 336 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 386
Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669
C ++FV+ R + L N+I+ P+L + L P + GR +
Sbjct 387 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 432
Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727
+ L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+
Sbjct 433 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 491
Query 728 RGRGRARGSKCFLLTSN 744
+GR R +K L T++
Sbjct 492 KGRARTTEAKFVLFTAD 508
>7w0d_E F Dicer-2, isoform A
Length=1722
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298
KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N
Sbjct 7 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 65
Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355
+ + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ +
Sbjct 66 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 123
Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411
+ T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT
Sbjct 124 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 176
Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448
+ V D K + + Y A+ V+ + H
Sbjct 177 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 228
Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500
EQV+ + ++E +S I Q +R ++SL K K L N Q
Sbjct 229 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 287
Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560
+E+G I+++ + F + + E+ K + + AL + E R
Sbjct 288 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIR- 334
Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614
+ L+D + + +E+ + + QRF L S+ ++++PK D+
Sbjct 335 HLLVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 386
Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669
C ++FV+ R + L N+I+ P+L + L P + GR +
Sbjct 387 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 432
Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727
+ L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+
Sbjct 433 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 491
Query 728 RGRGRARGSKCFLLTSN 744
+GR R +K L T++
Sbjct 492 KGRARTTEAKFVLFTAD 508
>7w0b_A A Dicer-2, isoform A
Length=1722
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298
KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N
Sbjct 7 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 65
Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355
+ + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ +
Sbjct 66 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 123
Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411
+ T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT
Sbjct 124 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 176
Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448
+ V D K + + Y A+ V+ + H
Sbjct 177 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 228
Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500
EQV+ + ++E +S I Q +R ++SL K K L N Q
Sbjct 229 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 287
Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560
+E+G I+++ + F + + E+ K + + AL + E R
Sbjct 288 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 335
Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614
+ L+D + + +E+ + + QRF L S+ ++++PK D+
Sbjct 336 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 386
Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669
C ++FV+ R + L N+I+ P+L + L P + GR +
Sbjct 387 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 432
Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727
+ L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+
Sbjct 433 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 491
Query 728 RGRGRARGSKCFLLTSN 744
+GR R +K L T++
Sbjct 492 KGRARTTEAKFVLFTAD 508
>8hf1_D D Dicer-2, isoform A
Length=1721
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298
KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N
Sbjct 6 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 64
Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355
+ + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ +
Sbjct 65 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 122
Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411
+ T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT
Sbjct 123 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 175
Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448
+ V D K + + Y A+ V+ + H
Sbjct 176 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 227
Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500
EQV+ + ++E +S I Q +R ++SL K K L N Q
Sbjct 228 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 286
Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560
+E+G I+++ + F + + E+ K + + AL + E R
Sbjct 287 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 334
Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614
+ L+D + + +E+ + + QRF L S+ ++++PK D+
Sbjct 335 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 385
Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669
C ++FV+ R + L N+I+ P+L + L P + GR +
Sbjct 386 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 431
Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727
+ L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+
Sbjct 432 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 490
Query 728 RGRGRARGSKCFLLTSN 744
+GR R +K L T++
Sbjct 491 KGRARTTEAKFVLFTAD 507
>8hf1_A A Dicer-2, isoform A
Length=1721
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298
KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N
Sbjct 6 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 64
Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355
+ + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ +
Sbjct 65 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 122
Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411
+ T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT
Sbjct 123 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 175
Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448
+ V D K + + Y A+ V+ + H
Sbjct 176 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 227
Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500
EQV+ + ++E +S I Q +R ++SL K K L N Q
Sbjct 228 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 286
Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560
+E+G I+++ + F + + E+ K + + AL + E R
Sbjct 287 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 334
Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614
+ L+D + + +E+ + + QRF L S+ ++++PK D+
Sbjct 335 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 385
Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669
C ++FV+ R + L N+I+ P+L + L P + GR +
Sbjct 386 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 431
Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727
+ L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+
Sbjct 432 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 490
Query 728 RGRGRARGSKCFLLTSN 744
+GR R +K L T++
Sbjct 491 KGRARTTEAKFVLFTAD 507
>8hf1_G G Dicer-2, isoform A
Length=1721
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298
KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N
Sbjct 6 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 64
Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355
+ + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ +
Sbjct 65 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 122
Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411
+ T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT
Sbjct 123 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 175
Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448
+ V D K + + Y A+ V+ + H
Sbjct 176 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 227
Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500
EQV+ + ++E +S I Q +R ++SL K K L N Q
Sbjct 228 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 286
Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560
+E+G I+++ + F + + E+ K + + AL + E R
Sbjct 287 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 334
Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614
+ L+D + + +E+ + + QRF L S+ ++++PK D+
Sbjct 335 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 385
Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669
C ++FV+ R + L N+I+ P+L + L P + GR +
Sbjct 386 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 431
Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727
+ L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+
Sbjct 432 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 490
Query 728 RGRGRARGSKCFLLTSN 744
+GR R +K L T++
Sbjct 491 KGRARTTEAKFVLFTAD 507
>8hf0_A A Dicer-2, isoform A
Length=1722
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298
KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N
Sbjct 7 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 65
Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355
+ + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ +
Sbjct 66 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 123
Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411
+ T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT
Sbjct 124 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 176
Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448
+ V D K + + Y A+ V+ + H
Sbjct 177 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 228
Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500
EQV+ + ++E +S I Q +R ++SL K K L N Q
Sbjct 229 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 287
Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560
+E+G I+++ + F + + E+ K + + AL + E R
Sbjct 288 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 335
Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614
+ L+D + + +E+ + + QRF L S+ ++++PK D+
Sbjct 336 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 386
Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669
C ++FV+ R + L N+I+ P+L + L P + GR +
Sbjct 387 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 432
Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727
+ L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+
Sbjct 433 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 491
Query 728 RGRGRARGSKCFLLTSN 744
+GR R +K L T++
Sbjct 492 KGRARTTEAKFVLFTAD 508
>8hf0_D D Dicer-2, isoform A
Length=1722
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298
KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N
Sbjct 7 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 65
Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355
+ + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ +
Sbjct 66 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 123
Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411
+ T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT
Sbjct 124 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 176
Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448
+ V D K + + Y A+ V+ + H
Sbjct 177 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 228
Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500
EQV+ + ++E +S I Q +R ++SL K K L N Q
Sbjct 229 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 287
Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560
+E+G I+++ + F + + E+ K + + AL + E R
Sbjct 288 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 335
Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614
+ L+D + + +E+ + + QRF L S+ ++++PK D+
Sbjct 336 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 386
Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669
C ++FV+ R + L N+I+ P+L + L P + GR +
Sbjct 387 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 432
Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727
+ L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+
Sbjct 433 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 491
Query 728 RGRGRARGSKCFLLTSN 744
+GR R +K L T++
Sbjct 492 KGRARTTEAKFVLFTAD 508
>7w0c_A A Dicer-2, isoform A
Length=1722
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298
KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N
Sbjct 7 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 65
Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355
+ + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ +
Sbjct 66 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 123
Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411
+ T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT
Sbjct 124 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 176
Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448
+ V D K + + Y A+ V+ + H
Sbjct 177 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 228
Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500
EQV+ + ++E +S I Q +R ++SL K K L N Q
Sbjct 229 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 287
Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560
+E+G I+++ + F + + E+ K + + AL + E R
Sbjct 288 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 335
Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614
+ L+D + + +E+ + + QRF L S+ ++++PK D+
Sbjct 336 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 386
Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669
C ++FV+ R + L N+I+ P+L + L P + GR +
Sbjct 387 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 432
Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727
+ L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+
Sbjct 433 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 491
Query 728 RGRGRARGSKCFLLTSN 744
+GR R +K L T++
Sbjct 492 KGRARTTEAKFVLFTAD 508
>7w0a_H E Dicer-2, isoform A
Length=1722
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298
KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N
Sbjct 7 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 65
Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355
+ + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ +
Sbjct 66 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 123
Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411
+ T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT
Sbjct 124 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 176
Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448
+ V D K + + Y A+ V+ + H
Sbjct 177 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 228
Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500
EQV+ + ++E +S I Q +R ++SL K K L N Q
Sbjct 229 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 287
Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560
+E+G I+++ + F + + E+ K + + AL + E R
Sbjct 288 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 335
Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614
+ L+D + + +E+ + + QRF L S+ ++++PK D+
Sbjct 336 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 386
Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669
C ++FV+ R + L N+I+ P+L + L P + GR +
Sbjct 387 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 432
Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727
+ L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+
Sbjct 433 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 491
Query 728 RGRGRARGSKCFLLTSN 744
+GR R +K L T++
Sbjct 492 KGRARTTEAKFVLFTAD 508
>7w0a_A A Dicer-2, isoform A
Length=1722
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298
KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N
Sbjct 7 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 65
Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355
+ + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ +
Sbjct 66 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 123
Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411
+ T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT
Sbjct 124 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 176
Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448
+ V D K + + Y A+ V+ + H
Sbjct 177 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 228
Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500
EQV+ + ++E +S I Q +R ++SL K K L N Q
Sbjct 229 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 287
Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560
+E+G I+++ + F + + E+ K + + AL + E R
Sbjct 288 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 335
Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614
+ L+D + + +E+ + + QRF L S+ ++++PK D+
Sbjct 336 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 386
Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669
C ++FV+ R + L N+I+ P+L + L P + GR +
Sbjct 387 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 432
Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727
+ L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+
Sbjct 433 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 491
Query 728 RGRGRARGSKCFLLTSN 744
+GR R +K L T++
Sbjct 492 KGRARTTEAKFVLFTAD 508
>7eld_A A Endoribonuclease Dicer homolog 1
Length=1909
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 114/220 (52%), Gaps = 12/220 (5%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEH-HLKKFPQGQKGKVVFFANQIP- 301
R YQL++ L K KNTI TG GKT +++L+ + H Q +K VF ++P
Sbjct 250 RRYQLDV-LEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPL 308
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VY+Q + + ++ + G+ + ++ ++ E+ ++++T QIL+N L+ I
Sbjct 309 VYQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVMTAQILLNILRHSII- 367
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTAS-VGV-GDAKN 419
+ L+I DECH+ K+HPY+++M + P + G+TAS V + G +
Sbjct 368 RMETIDLLILDECHHAVKKHPYSLVMSEFYHTT---PKDKRPAIFGMTASPVNLKGVSSQ 424
Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKF 459
D A+ I L LD S + T+K + +ELE+ V P +
Sbjct 425 VDCAIK-IRNLETKLD-STVCTIK-DRKELEKHVPMPSEI 461
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query 630 TILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASG 689
I+FV+ L P LSF++ + G N + M + + F+ G
Sbjct 667 AIVFVERVVAALVLPKVFAELPSLSFIRCASMIGH---NNSQEMKSSQMQDTISKFR-DG 722
Query 690 DHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGV 747
+L+ATSVA+EG+DI QCN+V+ ++ V+ IQ+RGR R GS L+ V
Sbjct 723 HVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNV 780
>7ele_A A Endoribonuclease Dicer homolog 1
Length=1909
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 114/220 (52%), Gaps = 12/220 (5%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEH-HLKKFPQGQKGKVVFFANQIP- 301
R YQL++ L K KNTI TG GKT +++L+ + H Q +K VF ++P
Sbjct 250 RRYQLDV-LEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPL 308
Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
VY+Q + + ++ + G+ + ++ ++ E+ ++++T QIL+N L+ I
Sbjct 309 VYQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVMTAQILLNILRHSII- 367
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTAS-VGV-GDAKN 419
+ L+I DECH+ K+HPY+++M + P + G+TAS V + G +
Sbjct 368 RMETIDLLILDECHHAVKKHPYSLVMSEFYHTT---PKDKRPAIFGMTASPVNLKGVSSQ 424
Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKF 459
D A+ I L LD S + T+K + +ELE+ V P +
Sbjct 425 VDCAIK-IRNLETKLD-STVCTIK-DRKELEKHVPMPSEI 461
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query 630 TILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASG 689
I+FV+ L P LSF++ + G N + M + + F+ G
Sbjct 667 AIVFVERVVAALVLPKVFAELPSLSFIRCASMIGH---NNSQEMKSSQMQDTISKFR-DG 722
Query 690 DHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGV 747
+L+ATSVA+EG+DI QCN+V+ ++ V+ IQ+RGR R GS L+ V
Sbjct 723 HVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNV 780
>7xw3_A A Endoribonuclease Dicer
Length=1922
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICE---HHLKKFPQGQKGKVVFFA 297
+ PR YQ+EL L A NTI+C TG GKTF+++L+ + + ++ + VF
Sbjct 42 YTPRKYQVEL-LEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLV 100
Query 298 NQIPVYEQQKSVFSKYFERHGYRVTGIS-GATAENVPVEQIVENNDIIILTPQILVNNLK 356
N QQ S + + + + A+ Q + ++I+T + +N LK
Sbjct 101 NSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLK 160
Query 357 KGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASV--GV 414
G + SLS L++FDECH HPY IM KL + P+++GLTAS+ G
Sbjct 161 NGYL-SLSDINLLVFDECHLAILDHPYREIM------KLCENCPSCPRILGLTASILNGK 213
Query 415 GDAKNTDEALDYICKLCAS 433
D + +E + + K+ S
Sbjct 214 CDPEELEEKIQKLEKILKS 232
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 13/145 (9%)
Query 631 ILFVKTRALVDALKNWIE----GNPKLSFLKPGILTGRG-KTNQNTGMTLPA----QKCI 681
I+FV+ R L I+ +P+L+++ +TG G NQ + A Q+ +
Sbjct 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQMEAEFRKQEEV 504
Query 682 LDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL 741
L F+A + N+LIATS+ +EG+DI +CNLV+ ++ +Q++GR RA S +L
Sbjct 505 LRKFRAH-ETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query 742 TSNAGVIE-KEQINMYK--EKMMND 763
+ +E + YK EK++ +
Sbjct 564 ADTDKIKSFEEDLKTYKAIEKILRN 588
>5zam_A A Endoribonuclease Dicer
Length=1922
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 94/196 (48%), Gaps = 14/196 (7%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICE---HHLKKFPQGQKGKVVFFANQI 300
R YQ+EL L A NTI+C TG GKTF+++L+ + + ++ + VF N
Sbjct 45 RKYQVEL-LEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSA 103
Query 301 PVYEQQKSVFSKYFERHGYRVTGIS-GATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
QQ S + + + + A+ Q + ++I+T + +N LK G
Sbjct 104 NQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNGY 163
Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASV--GVGDA 417
+ SLS L++FDECH HPY IM KL + P+++GLTAS+ G D
Sbjct 164 L-SLSDINLLVFDECHLAILDHPYREIM------KLCENCPSCPRILGLTASILNGKCDP 216
Query 418 KNTDEALDYICKLCAS 433
+ +E + + K+ S
Sbjct 217 EELEEKIQKLEKILKS 232
Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 13/145 (9%)
Query 631 ILFVKTRALVDALKNWIE----GNPKLSFLKPGILTGRG-KTNQNTGMTLPA----QKCI 681
I+FV+ R L I+ +P+L+++ +TG G NQ + A Q+ +
Sbjct 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQMEAEFRKQEEV 504
Query 682 LDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL 741
L F+A + N+LIATS+ +EG+DI +CNLV+ ++ +Q++GR RA S +L
Sbjct 505 LRKFRAH-ETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query 742 TSNAGVIE-KEQINMYK--EKMMND 763
+ +E + YK EK++ +
Sbjct 564 ADTDKIKSFEEDLKTYKAIEKILRN 588
>5zal_A A Endoribonuclease Dicer
Length=1922
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 94/196 (48%), Gaps = 14/196 (7%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICE---HHLKKFPQGQKGKVVFFANQI 300
R YQ+EL L A NTI+C TG GKTF+++L+ + + ++ + VF N
Sbjct 45 RKYQVEL-LEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSA 103
Query 301 PVYEQQKSVFSKYFERHGYRVTGIS-GATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
QQ S + + + + A+ Q + ++I+T + +N LK G
Sbjct 104 NQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNGY 163
Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASV--GVGDA 417
+ SLS L++FDECH HPY IM KL + P+++GLTAS+ G D
Sbjct 164 L-SLSDINLLVFDECHLAILDHPYREIM------KLCENCPSCPRILGLTASILNGKCDP 216
Query 418 KNTDEALDYICKLCAS 433
+ +E + + K+ S
Sbjct 217 EELEEKIQKLEKILKS 232
Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 13/145 (9%)
Query 631 ILFVKTRALVDALKNWIE----GNPKLSFLKPGILTGRG-KTNQNTGMTLPA----QKCI 681
I+FV+ R L I+ +P+L+++ +TG G NQ + A Q+ +
Sbjct 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQMEAEFRKQEEV 504
Query 682 LDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL 741
L F+A + N+LIATS+ +EG+DI +CNLV+ ++ +Q++GR RA S +L
Sbjct 505 LRKFRAH-ETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query 742 TSNAGVIE-KEQINMYK--EKMMND 763
+ +E + YK EK++ +
Sbjct 564 ADTDKIKSFEEDLKTYKAIEKILRN 588
>5zak_A A Endoribonuclease Dicer
Length=1922
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 94/196 (48%), Gaps = 14/196 (7%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICE---HHLKKFPQGQKGKVVFFANQI 300
R YQ+EL L A NTI+C TG GKTF+++L+ + + ++ + VF N
Sbjct 45 RKYQVEL-LEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSA 103
Query 301 PVYEQQKSVFSKYFERHGYRVTGIS-GATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
QQ S + + + + A+ Q + ++I+T + +N LK G
Sbjct 104 NQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNGY 163
Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASV--GVGDA 417
+ SLS L++FDECH HPY IM KL + P+++GLTAS+ G D
Sbjct 164 L-SLSDINLLVFDECHLAILDHPYREIM------KLCENCPSCPRILGLTASILNGKCDP 216
Query 418 KNTDEALDYICKLCAS 433
+ +E + + K+ S
Sbjct 217 EELEEKIQKLEKILKS 232
Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 13/145 (9%)
Query 631 ILFVKTRALVDALKNWIE----GNPKLSFLKPGILTGRG-KTNQNTGMTLPA----QKCI 681
I+FV+ R L I+ +P+L+++ +TG G NQ + A Q+ +
Sbjct 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQMEAEFRKQEEV 504
Query 682 LDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL 741
L F+A + N+LIATS+ +EG+DI +CNLV+ ++ +Q++GR RA S +L
Sbjct 505 LRKFRAH-ETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query 742 TSNAGVIE-KEQINMYK--EKMMND 763
+ +E + YK EK++ +
Sbjct 564 ADTDKIKSFEEDLKTYKAIEKILRN 588
>7yym_A A Endoribonuclease Dicer
Length=2004
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/174 (32%), Positives = 83/174 (48%), Gaps = 12/174 (7%)
Query 246 YQLELALPAMKGKNTIICAPTGCGKTFVSLLICE---HHLKKFPQGQKGKVVFFANQIPV 302
YQ+EL L A NTI+C TG GKTF+++L+ + H ++ + VF N
Sbjct 100 YQVEL-LEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKRTVFLVNSANQ 158
Query 303 YEQQKSVFSKYFERHGYRVTGIS-GATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
QQ S + + + + A+ Q + ++I+T + + LK G +
Sbjct 159 VAQQVSAVRTHSDLKVGEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLKNGYL- 217
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 415
SLS L++FDECH HPY IM KL S P+++GLTAS+ G
Sbjct 218 SLSDINLLVFDECHLAILDHPYREIM------KLCESCPSCPRILGLTASILNG 265
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/145 (28%), Positives = 70/145 (48%), Gaps = 13/145 (9%)
Query 631 ILFVKTRALVDALKNWIE----GNPKLSFLKPGILTGRGKTNQNTGMT-----LPAQKCI 681
I+FV+ R L I+ +P+L+++ +T Q+ +
Sbjct 498 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITXXXXXXXXXXXXXXXXEFRKQEEV 557
Query 682 LDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL 741
L F+A + N+LIATSV +EG+DI +CNLV+ ++ +Q++GR RA S +L
Sbjct 558 LRKFRAH-ETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVML 616
Query 742 TSNAGVIE-KEQINMYK--EKMMND 763
+ +E + YK EK++ +
Sbjct 617 ADTDKIKSFEEDLKTYKAIEKILRN 641
>7yz4_A A Endoribonuclease Dicer
Length=2004
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/174 (32%), Positives = 83/174 (48%), Gaps = 12/174 (7%)
Query 246 YQLELALPAMKGKNTIICAPTGCGKTFVSLLICE---HHLKKFPQGQKGKVVFFANQIPV 302
YQ+EL L A NTI+C TG GKTF+++L+ + H ++ + VF N
Sbjct 100 YQVEL-LEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKRTVFLVNSANQ 158
Query 303 YEQQKSVFSKYFERHGYRVTGIS-GATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
QQ S + + + + A+ Q + ++I+T + + LK G +
Sbjct 159 VAQQVSAVRTHSDLKVGEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLKNGYL- 217
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 415
SLS L++FDECH HPY IM KL S P+++GLTAS+ G
Sbjct 218 SLSDINLLVFDECHLAILDHPYREIM------KLCESCPSCPRILGLTASILNG 265
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/145 (28%), Positives = 70/145 (48%), Gaps = 13/145 (9%)
Query 631 ILFVKTRALVDALKNWIE----GNPKLSFLKPGILTGRGKTNQNTGMT-----LPAQKCI 681
I+FV+ R L I+ +P+L+++ +T Q+ +
Sbjct 498 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITXXXXXXXXXXXXXXXXEFRKQEEV 557
Query 682 LDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL 741
L F+A + N+LIATSV +EG+DI +CNLV+ ++ +Q++GR RA S +L
Sbjct 558 LRKFRAH-ETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVML 616
Query 742 TSNAGVIE-KEQINMYK--EKMMND 763
+ +E + YK EK++ +
Sbjct 617 ADTDKIKSFEEDLKTYKAIEKILRN 641
>7zpj_A A Endoribonuclease Dicer
Length=2004
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/174 (32%), Positives = 83/174 (48%), Gaps = 12/174 (7%)
Query 246 YQLELALPAMKGKNTIICAPTGCGKTFVSLLICE---HHLKKFPQGQKGKVVFFANQIPV 302
YQ+EL L A NTI+C TG GKTF+++L+ + H ++ + VF N
Sbjct 100 YQVEL-LEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKRTVFLVNSANQ 158
Query 303 YEQQKSVFSKYFERHGYRVTGIS-GATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
QQ S + + + + A+ Q + ++I+T + + LK G +
Sbjct 159 VAQQVSAVRTHSDLKVGEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLKNGYL- 217
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 415
SLS L++FDECH HPY IM KL S P+++GLTAS+ G
Sbjct 218 SLSDINLLVFDECHLAILDHPYREIM------KLCESCPSCPRILGLTASILNG 265
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/145 (28%), Positives = 70/145 (48%), Gaps = 13/145 (9%)
Query 631 ILFVKTRALVDALKNWIE----GNPKLSFLKPGILTGRGKTNQNTGMT-----LPAQKCI 681
I+FV+ R L I+ +P+L+++ +T Q+ +
Sbjct 498 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITXXXXXXXXXXXXXXXXEFRKQEEV 557
Query 682 LDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL 741
L F+A + N+LIATSV +EG+DI +CNLV+ ++ +Q++GR RA S +L
Sbjct 558 LRKFRAH-ETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVML 616
Query 742 TSNAGVIE-KEQINMYK--EKMMND 763
+ +E + YK EK++ +
Sbjct 617 ADTDKIKSFEEDLKTYKAIEKILRN 641
>7zpk_A A Endoribonuclease Dicer
Length=2004
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/174 (32%), Positives = 83/174 (48%), Gaps = 12/174 (7%)
Query 246 YQLELALPAMKGKNTIICAPTGCGKTFVSLLICE---HHLKKFPQGQKGKVVFFANQIPV 302
YQ+EL L A NTI+C TG GKTF+++L+ + H ++ + VF N
Sbjct 100 YQVEL-LEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKRTVFLVNSANQ 158
Query 303 YEQQKSVFSKYFERHGYRVTGIS-GATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
QQ S + + + + A+ Q + ++I+T + + LK G +
Sbjct 159 VAQQVSAVRTHSDLKVGEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLKNGYL- 217
Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 415
SLS L++FDECH HPY IM KL S P+++GLTAS+ G
Sbjct 218 SLSDINLLVFDECHLAILDHPYREIM------KLCESCPSCPRILGLTASILNG 265
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/145 (28%), Positives = 70/145 (48%), Gaps = 13/145 (9%)
Query 631 ILFVKTRALVDALKNWIE----GNPKLSFLKPGILTGRGKTNQNTGMT-----LPAQKCI 681
I+FV+ R L I+ +P+L+++ +T Q+ +
Sbjct 498 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITXXXXXXXXXXXXXXXXEFRKQEEV 557
Query 682 LDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL 741
L F+A + N+LIATSV +EG+DI +CNLV+ ++ +Q++GR RA S +L
Sbjct 558 LRKFRAH-ETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVML 616
Query 742 TSNAGVIE-KEQINMYK--EKMMND 763
+ +E + YK EK++ +
Sbjct 617 ADTDKIKSFEEDLKTYKAIEKILRN 641
>7v6c_A A Dicer-2, isoform A
Length=1733
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 18/182 (10%)
Query 243 PRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFANQ 299
PR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N
Sbjct 19 PRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNT 77
Query 300 IPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356
+ + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ +
Sbjct 78 VELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMVT 135
Query 357 KGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTASVGV 414
+ T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT +
Sbjct 136 Q-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLIK 188
Query 415 GD 416
G+
Sbjct 189 GN 190
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query 584 QDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEY-HLNPETIT-ILFVKTR---- 637
QD+T E V + S PK++ L+ + +P+ I ++FV+ R
Sbjct 353 QDMTXXXXXXXXNTEEVIMNFST--PKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCK 410
Query 638 ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQNTGMTLPA--QKCILDAFKASGDHNIL 694
+ L N+I+ P+L + L P + G L QK + F+ G+ N++
Sbjct 411 CIYGLLLNYIQSTPELRNVLTPQFMVGXXXXXXXXXSVLERKWQKSAIQQFR-DGNANLM 469
Query 695 IATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN 744
I +SV +EGID+ CN V + + V +Q++GR R +K L T++
Sbjct 470 ICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTAD 519
>7v6b_A A Dicer-2, isoform A
Length=1724
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 18/182 (10%)
Query 243 PRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFANQ 299
PR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N
Sbjct 10 PRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNT 68
Query 300 IPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356
+ + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ +
Sbjct 69 VELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMVT 126
Query 357 KGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTASVGV 414
+ T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT +
Sbjct 127 Q-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLIK 179
Query 415 GD 416
G+
Sbjct 180 GN 181
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (49%), Gaps = 8/121 (7%)
Query 631 ILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQNTGMTLPA--QKCILD 683
++FV+ R + L N+I+ P+L + L P + L QK +
Sbjct 391 LVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVXXXXXXXXXXSVLERKWQKSAIQ 450
Query 684 AFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTS 743
F+ G+ N++I +SV +EGID+ CN V + + V +Q++GR R +K L T+
Sbjct 451 QFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTA 509
Query 744 N 744
+
Sbjct 510 D 510
>3ga3_A A Interferon-induced helicase C domain-containing protein
1, MDA5
Length=133
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 4/102 (4%)
Query 808 LLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPK-PKQFSSFEKRAKIFCAR 866
LC+ C LAC D+ VIE+ H+ + FKE ++ R + K+ + ++ +I C
Sbjct 13 FLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKELYIVRENKALQKKCADYQINGEIICK- 71
Query 867 QNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908
C WG + +K ++P +KI +FVV + Y KW
Sbjct 72 --CGQAWGTMMVHKGLDLPCLKIRNFVVVFKNNSTKKQYKKW 111
>2rqb_A A Interferon-induced helicase C domain-containing protein
1
Length=135
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 4/102 (4%)
Query 808 LLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPK-PKQFSSFEKRAKIFCAR 866
LC+ C LAC D+ VIE+ H+ + FKE ++ R + K+ + ++ +I C
Sbjct 15 FLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKELYIVRENKALQKKCADYQINGEIICK- 73
Query 867 QNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908
C WG + +K ++P +KI +FVV + Y KW
Sbjct 74 --CGQAWGTMMVHKGLDLPCLKIRNFVVVFKNNSTKKQYKKW 113
>6bua_A A Dicer-2, isoform A
Length=1724
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (49%), Gaps = 26/185 (14%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-------QKGKVVFF 296
R YQL L + + N I+ PTG GKTFV++L+ LK+F Q + +F
Sbjct 11 RGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILV----LKRFSQDFXXXXXXXXXRALFM 65
Query 297 ANQIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVN 353
N + + QQ + + G+ V G+ T E ++ N +++ T Q+ ++
Sbjct 66 CNTVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLD 123
Query 354 NLKKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS 411
+ + T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT
Sbjct 124 MVTQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGV 176
Query 412 VGVGD 416
+ G+
Sbjct 177 LIKGN 181
>3ts9_A A Interferon-induced helicase C domain-containing protein
1
Length=138
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/117 (30%), Positives = 59/117 (50%), Gaps = 22/117 (19%)
Query 503 EFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKD 562
+FGTQ YEQW + ++K D + + R+C HLRKYN+AL I++ RM D
Sbjct 32 DFGTQHYEQWAIQMEKKAA----KDGNRKDRVC------AEHLRKYNEALQINDTIRMID 81
Query 563 ALDYLKDFFSNVRAAGF------------DEIEQDLTQRFEEKLQELESVSRDPSNE 607
A +L+ F+++ + F DE ++ L F + + L+ ++ +P E
Sbjct 82 AYSHLETFYTDEKEKKFAVLNXXXXSLKLDETDEFLMNLFFDNKKMLKKLAENPKYE 138
>2rqa_A A ATP-dependent RNA helicase DHX58
Length=137
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/118 (30%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query 804 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECF-VSR-PHPKPKQFSSFEKRAK 861
E+ +LLC C + +D+R +E H+ + F + VSR P K F ++
Sbjct 9 EHVQLLCINCMVAVGHGSDLRKVEGTHHVNVNPNFSNYYNVSRDPVVINKVFKDWKPGGV 68
Query 862 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFD 919
I C +NC WG+ + YK+ ++PV+K+ S ++E +Q KW F FD
Sbjct 69 ISC--RNCGEVWGLQMIYKSVKLPVLKVRSMLLETPQGRIQA--KKWSRVPFSVPDFD 122
>3eqt_A A ATP-dependent RNA helicase DHX58
Length=145
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/118 (30%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query 804 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECF-VSR-PHPKPKQFSSFEKRAK 861
E+ +LLC C + +D+R +E H+ + F + VSR P K F ++
Sbjct 10 EHVQLLCINCMVAVGHGSDLRKVEGTHHVNVNPNFSNYYNVSRDPVVINKVFKDWKPGGV 69
Query 862 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFD 919
I C +NC WG+ + YK+ ++PV+K+ S ++E +Q KW F FD
Sbjct 70 ISC--RNCGEVWGLQMIYKSVKLPVLKVRSMLLETPQGRIQA--KKWSRVPFSVPDFD 123
>3eqt_B B ATP-dependent RNA helicase DHX58
Length=145
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/118 (30%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query 804 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECF-VSR-PHPKPKQFSSFEKRAK 861
E+ +LLC C + +D+R +E H+ + F + VSR P K F ++
Sbjct 10 EHVQLLCINCMVAVGHGSDLRKVEGTHHVNVNPNFSNYYNVSRDPVVINKVFKDWKPGGV 69
Query 862 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFD 919
I C +NC WG+ + YK+ ++PV+K+ S ++E +Q KW F FD
Sbjct 70 ISC--RNCGEVWGLQMIYKSVKLPVLKVRSMLLETPQGRIQA--KKWSRVPFSVPDFD 123
>2w4r_A A PROBABLE ATP-DEPENDENT RNA HELICASE DHX58
Length=142
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/118 (29%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query 804 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECF-VSR-PHPKPKQFSSFEKRAK 861
E+ +LLC C + +D+R +E H+ + F + VSR P F ++
Sbjct 14 EHVQLLCINCMVAVGHGSDLRKVEGTHHVNVNPNFSNYYNVSRDPVVXXXXFKDWKPGGV 73
Query 862 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFD 919
I C +NC WG+ + YK+ ++PV+K+ S ++E +Q KW F FD
Sbjct 74 ISC--RNCGEVWGLQMIYKSVKLPVLKVRSMLLETPQGRIQA--KKWSRVPFSVPDFD 127
>2w4r_D D PROBABLE ATP-DEPENDENT RNA HELICASE DHX58
Length=142
Score = 50.1 bits (118), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/118 (28%), Positives = 55/118 (47%), Gaps = 6/118 (5%)
Query 804 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECF-VSRPHPKPKQ-FSSFEKRAK 861
E+ +LLC C + +D+R +E H+ + F + VSR F ++
Sbjct 14 EHVQLLCINCMVAVGHGSDLRKVEGTHHVNVNPNFSNYYNVSRDXXXXXXXFKDWKPGGV 73
Query 862 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFD 919
I C +NC WG+ + YK+ ++PV+K+ S ++E +Q KW F FD
Sbjct 74 ISC--RNCGEVWGLQMIYKSVKLPVLKVRSMLLETPQGRIQA--KKWSRVPFSVPDFD 127
>2w4r_C C PROBABLE ATP-DEPENDENT RNA HELICASE DHX58
Length=142
Score = 50.1 bits (118), Expect = 9e-06, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
Query 794 QEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECF-VSRPHPKPKQ 852
Q + PV E+ +LLC C + +D+R +E H+ + F + VSR
Sbjct 7 QRQQFPV---EHVQLLCINCMVAVGHGSDLRKVEGTHHVNVNPNFSNYYNVSRDXXXXXX 63
Query 853 -FSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDF 911
F ++ I C +NC WG+ + YK+ ++PV+K+ S ++E +Q KW
Sbjct 64 VFKDWKPGGVISC--RNCGEVWGLQMIYKSVKLPVLKVRSMLLETPQGRIQA--KKWSRV 119
Query 912 HFEKIPFD 919
F FD
Sbjct 120 PFSVPDFD 127
>2w4r_B B PROBABLE ATP-DEPENDENT RNA HELICASE DHX58
Length=142
Score = 50.1 bits (118), Expect = 9e-06, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 4/117 (3%)
Query 804 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECF-VSRPHPKPKQFSSFEKRAKI 862
E+ +LLC C + +D+R +E H+ + F + VSR K +
Sbjct 14 EHVQLLCINCMVAVGHGSDLRKVEGTHHVNVNPNFSNYYNVSRDXXXXXXXXXXWKPGGV 73
Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFD 919
R NC WG+ + YK+ ++PV+K+ S ++E +Q KW F FD
Sbjct 74 ISCR-NCGEVWGLQMIYKSVKLPVLKVRSMLLETPQGRIQA--KKWSRVPFSVPDFD 127
>5v9x_A A ATP-dependent DNA helicase
Length=877
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/173 (27%), Positives = 70/173 (40%), Gaps = 20/173 (12%)
Query 256 KGKNTIICAPTGCGKTFVSLLICEHHLK-KFPQGQKGKVVFFANQIPV--------YEQQ 306
+G NT++ APTG GKT + L L +G V + + +
Sbjct 61 EGNNTLVIAPTGSGKTLAAFLWAIDRLADPXXXXXQGTQVLYVSPLKALAVDVERNLRTP 120
Query 307 KSVFSKYFERHGYRVTGI-----SGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361
+ ++ ERHG I SG T N I D++I TP+ L L
Sbjct 121 LTGITRVAERHGLPAPSITVGVRSGDTPPNQRRAMIANPPDVLITTPESLFLMLTSAARE 180
Query 362 SLSIFTLMIFDECH--NTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASV 412
+L+ +I DE H +K+ + + LDQ L + Q IGL+A+V
Sbjct 181 TLTSVRTVIVDEVHAVAATKRGAHLALSLERLDQLLDTPA----QRIGLSATV 229
>6qws_A A Pre-mRNA splicing helicase-like protein
Length=1725
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/125 (29%), Positives = 63/125 (50%), Gaps = 12/125 (10%)
Query 259 NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-------KVVFFANQIPVYEQQKSVFS 311
N ++CAPTG GKT V++L + K + +KG K+V+ A + ++Q F
Sbjct 78 NMLVCAPTGSGKTNVAMLTMLREIGK-NRNEKGEIDLDAFKIVYIAPLKALVQEQVGNFG 136
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT-IPSLSIFTLMI 370
K E +G +V+ ++G + +Q + +I+ TP+ +K T I ++ L+I
Sbjct 137 KRLEPYGIKVSELTG---DRQLTKQQISETQVIVTTPEKWDVITRKATDISYTNLVRLII 193
Query 371 FDECH 375
DE H
Sbjct 194 IDEIH 198
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 43/175 (25%), Positives = 77/175 (44%), Gaps = 21/175 (12%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFER 316
N ++ APTG GKT +C L+ + + G+ V+ A P E F + +R
Sbjct 928 NVLVAAPTGSGKT-----VCAEFALLRHWAKKDAGRAVYIA---PFQELVDLRFQDWQKR 979
Query 317 HGYRVTG--ISGATAENVPVEQIVENNDIIILTP---QILVNNLKKGTIPSLSIFTLMIF 371
+ G I T E +++E D+I+ TP +L K+ ++ L I
Sbjct 980 LSHLRGGKEIVKLTGETTTDLKLLEQGDLILATPLQWDVLSRQWKRRK--NVQTVELFIA 1037
Query 372 DECHNTSKQHPYNM-IMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALD 425
D+ H Q Y I+ + + + P+ +++GL SV + +A++ E +D
Sbjct 1038 DDLHMLGGQMGYIYEIVVSRMHFIRTQTELPM-RIVGL--SVSLANARDIGEWID 1089
>5m59_H G Pre-mRNA splicing helicase-like protein
Length=1772
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/125 (29%), Positives = 63/125 (50%), Gaps = 12/125 (10%)
Query 259 NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-------KVVFFANQIPVYEQQKSVFS 311
N ++CAPTG GKT V++L + K + +KG K+V+ A + ++Q F
Sbjct 125 NMLVCAPTGSGKTNVAMLTMLREIGK-NRNEKGEIDLDAFKIVYIAPLKALVQEQVGNFG 183
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT-IPSLSIFTLMI 370
K E +G +V+ ++G + +Q + +I+ TP+ +K T I ++ L+I
Sbjct 184 KRLEPYGIKVSELTG---DRQLTKQQISETQVIVTTPEKWDVITRKATDISYTNLVRLII 240
Query 371 FDECH 375
DE H
Sbjct 241 IDEIH 245
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/175 (25%), Positives = 77/175 (44%), Gaps = 21/175 (12%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFER 316
N ++ APTG GKT +C L+ + + G+ V+ A P E F + +R
Sbjct 975 NVLVAAPTGSGKT-----VCAEFALLRHWAKKDAGRAVYIA---PFQELVDLRFQDWQKR 1026
Query 317 HGYRVTG--ISGATAENVPVEQIVENNDIIILTP---QILVNNLKKGTIPSLSIFTLMIF 371
+ G I T E +++E D+I+ TP +L K+ ++ L I
Sbjct 1027 LSHLRGGKEIVKLTGETTTDLKLLEQGDLILATPLQWDVLSRQWKRRK--NVQTVELFIA 1084
Query 372 DECHNTSKQHPYNM-IMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALD 425
D+ H Q Y I+ + + + P+ +++GL SV + +A++ E +D
Sbjct 1085 DDLHMLGGQMGYIYEIVVSRMHFIRTQTELPM-RIVGL--SVSLANARDIGEWID 1136
>6qv4_A A Pre-mRNA splicing helicase-like protein
Length=1725
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/125 (29%), Positives = 63/125 (50%), Gaps = 12/125 (10%)
Query 259 NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-------KVVFFANQIPVYEQQKSVFS 311
N ++CAPTG GKT V++L + K + +KG K+V+ A + ++Q F
Sbjct 78 NMLVCAPTGSGKTNVAMLTMLREIGK-NRNEKGEIDLDAFKIVYIAPLKALVQEQVGNFG 136
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT-IPSLSIFTLMI 370
K E +G +V+ ++G + +Q + +I+ TP+ +K T I ++ L+I
Sbjct 137 KRLEPYGIKVSELTG---DRQLTKQQISETQVIVTTPEKWDVITRKATDISYTNLVRLII 193
Query 371 FDECH 375
DE H
Sbjct 194 IDEIH 198
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/175 (25%), Positives = 77/175 (44%), Gaps = 21/175 (12%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFER 316
N ++ APTG GKT +C L+ + + G+ V+ A P E F + +R
Sbjct 928 NVLVAAPTGSGKT-----VCAEFALLRHWAKKDAGRAVYIA---PFQELVDLRFQDWQKR 979
Query 317 HGYRVTG--ISGATAENVPVEQIVENNDIIILTP---QILVNNLKKGTIPSLSIFTLMIF 371
+ G I T E +++E D+I+ TP +L K+ ++ L I
Sbjct 980 LSHLRGGKEIVKLTGETTTDLKLLEQGDLILATPLQWDVLSRQWKRRK--NVQTVELFIA 1037
Query 372 DECHNTSKQHPYNM-IMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALD 425
D+ H Q Y I+ + + + P+ +++GL SV + +A++ E +D
Sbjct 1038 DDLHMLGGQMGYIYEIVVSRMHFIRTQTELPM-RIVGL--SVSLANARDIGEWID 1089
>6qv3_A A Pre-mRNA splicing helicase-like protein
Length=1725
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/125 (29%), Positives = 63/125 (50%), Gaps = 12/125 (10%)
Query 259 NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-------KVVFFANQIPVYEQQKSVFS 311
N ++CAPTG GKT V++L + K + +KG K+V+ A + ++Q F
Sbjct 78 NMLVCAPTGSGKTNVAMLTMLREIGK-NRNEKGEIDLDAFKIVYIAPLKALVQEQVGNFG 136
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT-IPSLSIFTLMI 370
K E +G +V+ ++G + +Q + +I+ TP+ +K T I ++ L+I
Sbjct 137 KRLEPYGIKVSELTG---DRQLTKQQISETQVIVTTPEKWDVITRKATDISYTNLVRLII 193
Query 371 FDECH 375
DE H
Sbjct 194 IDEIH 198
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/175 (25%), Positives = 77/175 (44%), Gaps = 21/175 (12%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFER 316
N ++ APTG GKT +C L+ + + G+ V+ A P E F + +R
Sbjct 928 NVLVAAPTGSGKT-----VCAEFALLRHWAKKDAGRAVYIA---PFQELVDLRFQDWQKR 979
Query 317 HGYRVTG--ISGATAENVPVEQIVENNDIIILTP---QILVNNLKKGTIPSLSIFTLMIF 371
+ G I T E +++E D+I+ TP +L K+ ++ L I
Sbjct 980 LSHLRGGKEIVKLTGETTTDLKLLEQGDLILATPLQWDVLSRQWKRRK--NVQTVELFIA 1037
Query 372 DECHNTSKQHPYNM-IMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALD 425
D+ H Q Y I+ + + + P+ +++GL SV + +A++ E +D
Sbjct 1038 DDLHMLGGQMGYIYEIVVSRMHFIRTQTELPM-RIVGL--SVSLANARDIGEWID 1089
>5m59_F E Pre-mRNA splicing helicase-like protein
Length=1772
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/125 (29%), Positives = 63/125 (50%), Gaps = 12/125 (10%)
Query 259 NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-------KVVFFANQIPVYEQQKSVFS 311
N ++CAPTG GKT V++L + K + +KG K+V+ A + ++Q F
Sbjct 125 NMLVCAPTGSGKTNVAMLTMLREIGK-NRNEKGEIDLDAFKIVYIAPLKALVQEQVGNFG 183
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT-IPSLSIFTLMI 370
K E +G +V+ ++G + +Q + +I+ TP+ +K T I ++ L+I
Sbjct 184 KRLEPYGIKVSELTG---DRQLTKQQISETQVIVTTPEKWDVITRKATDISYTNLVRLII 240
Query 371 FDECH 375
DE H
Sbjct 241 IDEIH 245
Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/175 (25%), Positives = 77/175 (44%), Gaps = 21/175 (12%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFER 316
N ++ APTG GKT +C L+ + + G+ V+ A P E F + +R
Sbjct 975 NVLVAAPTGSGKT-----VCAEFALLRHWAKKDAGRAVYIA---PFQELVDLRFQDWQKR 1026
Query 317 HGYRVTG--ISGATAENVPVEQIVENNDIIILTP---QILVNNLKKGTIPSLSIFTLMIF 371
+ G I T E +++E D+I+ TP +L K+ ++ L I
Sbjct 1027 LSHLRGGKEIVKLTGETTTDLKLLEQGDLILATPLQWDVLSRQWKRRK--NVQTVELFIA 1084
Query 372 DECHNTSKQHPYNM-IMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALD 425
D+ H Q Y I+ + + + P+ +++GL SV + +A++ E +D
Sbjct 1085 DDLHMLGGQMGYIYEIVVSRMHFIRTQTELPM-RIVGL--SVSLANARDIGEWID 1136
>5m59_B A Pre-mRNA splicing helicase-like protein
Length=1772
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/125 (29%), Positives = 63/125 (50%), Gaps = 12/125 (10%)
Query 259 NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-------KVVFFANQIPVYEQQKSVFS 311
N ++CAPTG GKT V++L + K + +KG K+V+ A + ++Q F
Sbjct 125 NMLVCAPTGSGKTNVAMLTMLREIGK-NRNEKGEIDLDAFKIVYIAPLKALVQEQVGNFG 183
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT-IPSLSIFTLMI 370
K E +G +V+ ++G + +Q + +I+ TP+ +K T I ++ L+I
Sbjct 184 KRLEPYGIKVSELTG---DRQLTKQQISETQVIVTTPEKWDVITRKATDISYTNLVRLII 240
Query 371 FDECH 375
DE H
Sbjct 241 IDEIH 245
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/175 (25%), Positives = 77/175 (44%), Gaps = 21/175 (12%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFER 316
N ++ APTG GKT +C L+ + + G+ V+ A P E F + +R
Sbjct 975 NVLVAAPTGSGKT-----VCAEFALLRHWAKKDAGRAVYIA---PFQELVDLRFQDWQKR 1026
Query 317 HGYRVTG--ISGATAENVPVEQIVENNDIIILTP---QILVNNLKKGTIPSLSIFTLMIF 371
+ G I T E +++E D+I+ TP +L K+ ++ L I
Sbjct 1027 LSHLRGGKEIVKLTGETTTDLKLLEQGDLILATPLQWDVLSRQWKRRK--NVQTVELFIA 1084
Query 372 DECHNTSKQHPYNM-IMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALD 425
D+ H Q Y I+ + + + P+ +++GL SV + +A++ E +D
Sbjct 1085 DDLHMLGGQMGYIYEIVVSRMHFIRTQTELPM-RIVGL--SVSLANARDIGEWID 1136
>5m59_D C Pre-mRNA splicing helicase-like protein
Length=1772
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/125 (29%), Positives = 63/125 (50%), Gaps = 12/125 (10%)
Query 259 NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-------KVVFFANQIPVYEQQKSVFS 311
N ++CAPTG GKT V++L + K + +KG K+V+ A + ++Q F
Sbjct 125 NMLVCAPTGSGKTNVAMLTMLREIGK-NRNEKGEIDLDAFKIVYIAPLKALVQEQVGNFG 183
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT-IPSLSIFTLMI 370
K E +G +V+ ++G + +Q + +I+ TP+ +K T I ++ L+I
Sbjct 184 KRLEPYGIKVSELTG---DRQLTKQQISETQVIVTTPEKWDVITRKATDISYTNLVRLII 240
Query 371 FDECH 375
DE H
Sbjct 241 IDEIH 245
Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/175 (25%), Positives = 77/175 (44%), Gaps = 21/175 (12%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFER 316
N ++ APTG GKT +C L+ + + G+ V+ A P E F + +R
Sbjct 975 NVLVAAPTGSGKT-----VCAEFALLRHWAKKDAGRAVYIA---PFQELVDLRFQDWQKR 1026
Query 317 HGYRVTG--ISGATAENVPVEQIVENNDIIILTP---QILVNNLKKGTIPSLSIFTLMIF 371
+ G I T E +++E D+I+ TP +L K+ ++ L I
Sbjct 1027 LSHLRGGKEIVKLTGETTTDLKLLEQGDLILATPLQWDVLSRQWKRRK--NVQTVELFIA 1084
Query 372 DECHNTSKQHPYNM-IMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALD 425
D+ H Q Y I+ + + + P+ +++GL SV + +A++ E +D
Sbjct 1085 DDLHMLGGQMGYIYEIVVSRMHFIRTQTELPM-RIVGL--SVSLANARDIGEWID 1136
>8dfv_A A Endoribonuclease Dcr-1
Length=2249
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query 636 TRALVDALKNWIEGNPKLSFLKPGILTGR----GKTNQNTGMTLPAQKCILDAFKASGDH 691
R L + L +P L FL+ T R + + Q+ +L F+ D
Sbjct 505 ARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEVLKRFRMH-DC 563
Query 692 NILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTS 743
N+LI TSV +EGID+ +CNLV+ ++ +Q +GR RA + +L +
Sbjct 564 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVA 615
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/256 (20%), Positives = 115/256 (45%), Gaps = 18/256 (7%)
Query 234 DTNLYSP-FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGK 292
D NL++ F PR++Q+EL A + +NTIIC K F++L + + ++ + G+
Sbjct 7 DNNLHTTVFTPRDFQVELLATAYE-RNTIICLGHRSSKEFIALKLLQELSRR--ARRHGR 63
Query 293 V-VFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL 351
V V+ + ++ + S+++ RV +P + + + IL P+
Sbjct 64 VSVYLSCEVGTSTEPCSIYTMLTHLTDLRV--WQEQPDMQIPFDHCWTDYHVSILRPEGF 121
Query 352 VNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTAS 411
+ L+ + LS L++ ++CH+++ Y I + + + P+++GL
Sbjct 122 LYLLETREL-LLSRVELIVLEDCHDSAV---YQRIRPLFENHIMPAPPADRPRILGL--- 174
Query 412 VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVY--KPQKFFRKVESRISD 469
G + L + + A+L+ SV+ ++ + + + Y +P ++ + D
Sbjct 175 --AGPLHSAGCELQQLSAMLATLEQSVLCQIESASDIVTVLRYCSRPHEYIVQCAPFEMD 232
Query 470 KFKYIIAQLMRDTESL 485
+ ++A ++ +S
Sbjct 233 ELSLVLADVLNTHKSF 248
>8dg5_A A Endoribonuclease Dcr-1
Length=2249
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query 636 TRALVDALKNWIEGNPKLSFLKPGILTGR----GKTNQNTGMTLPAQKCILDAFKASGDH 691
R L + L +P L FL+ T R + + Q+ +L F+ D
Sbjct 505 ARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEVLKRFRMH-DC 563
Query 692 NILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTS 743
N+LI TSV +EGID+ +CNLV+ ++ +Q +GR RA + +L +
Sbjct 564 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVA 615
Score = 42.0 bits (97), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 47/248 (19%), Positives = 110/248 (44%), Gaps = 17/248 (7%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKV-VFFANQ 299
F PR++Q+EL A + +NTIIC K F++L + + ++ + G+V V+ + +
Sbjct 15 FTPRDFQVELLATAYE-RNTIICLGHRSSKEFIALKLLQELSRR--ARRHGRVSVYLSCE 71
Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
+ + S+++ RV +P + + + IL P+ + L+
Sbjct 72 VGTSTEPCSIYTMLTHLTDLRV--WQEQPDMQIPFDHCWTDYHVSILRPEGFLYLLETRE 129
Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
+ LS L++ ++CH+++ Y I + + + P+++GL G +
Sbjct 130 L-LLSRVELIVLEDCHDSAV---YQRIRPLFENHIMPAPPADRPRILGL-----AGPLHS 180
Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVY--KPQKFFRKVESRISDKFKYIIAQ 477
L + + A+L+ SV+ ++ + + + Y +P ++ + D+ ++A
Sbjct 181 AGCELQQLSAMLATLEQSVLCQIESASDIVTVLRYCSRPHEYIVQCAPFEMDELSLVLAD 240
Query 478 LMRDTESL 485
++ +S
Sbjct 241 VLNTHKSF 248
>8dg7_A A Endoribonuclease Dcr-1
Length=2249
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query 636 TRALVDALKNWIEGNPKLSFLKPGILTGR----GKTNQNTGMTLPAQKCILDAFKASGDH 691
R L + L +P L FL+ T R + + Q+ +L F+ D
Sbjct 505 ARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEVLKRFRMH-DC 563
Query 692 NILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTS 743
N+LI TSV +EGID+ +CNLV+ ++ +Q +GR RA + +L +
Sbjct 564 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVA 615
Score = 42.0 bits (97), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 47/248 (19%), Positives = 110/248 (44%), Gaps = 17/248 (7%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKV-VFFANQ 299
F PR++Q+EL A + +NTIIC K F++L + + ++ + G+V V+ + +
Sbjct 15 FTPRDFQVELLATAYE-RNTIICLGHRSSKEFIALKLLQELSRR--ARRHGRVSVYLSCE 71
Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
+ + S+++ RV +P + + + IL P+ + L+
Sbjct 72 VGTSTEPCSIYTMLTHLTDLRV--WQEQPDMQIPFDHCWTDYHVSILRPEGFLYLLETRE 129
Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
+ LS L++ ++CH+++ Y I + + + P+++GL G +
Sbjct 130 L-LLSRVELIVLEDCHDSAV---YQRIRPLFENHIMPAPPADRPRILGL-----AGPLHS 180
Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVY--KPQKFFRKVESRISDKFKYIIAQ 477
L + + A+L+ SV+ ++ + + + Y +P ++ + D+ ++A
Sbjct 181 AGCELQQLSAMLATLEQSVLCQIESASDIVTVLRYCSRPHEYIVQCAPFEMDELSLVLAD 240
Query 478 LMRDTESL 485
++ +S
Sbjct 241 VLNTHKSF 248
>8dgi_A A Endoribonuclease Dcr-1
Length=2249
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query 636 TRALVDALKNWIEGNPKLSFLKPGILTGR----GKTNQNTGMTLPAQKCILDAFKASGDH 691
R L + L +P L FL+ T R + + Q+ +L F+ D
Sbjct 505 ARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEVLKRFRMH-DC 563
Query 692 NILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTS 743
N+LI TSV +EGID+ +CNLV+ ++ +Q +GR RA + +L +
Sbjct 564 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVA 615
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 47/248 (19%), Positives = 110/248 (44%), Gaps = 17/248 (7%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKV-VFFANQ 299
F PR++Q+EL A + +NTIIC K F++L + + ++ + G+V V+ + +
Sbjct 15 FTPRDFQVELLATAYE-RNTIICLGHRSSKEFIALKLLQELSRR--ARRHGRVSVYLSCE 71
Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
+ + S+++ RV +P + + + IL P+ + L+
Sbjct 72 VGTSTEPCSIYTMLTHLTDLRV--WQEQPDMQIPFDHCWTDYHVSILRPEGFLYLLETRE 129
Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
+ LS L++ ++CH+++ Y I + + + P+++GL G +
Sbjct 130 L-LLSRVELIVLEDCHDSAV---YQRIRPLFENHIMPAPPADRPRILGL-----AGPLHS 180
Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVY--KPQKFFRKVESRISDKFKYIIAQ 477
L + + A+L+ SV+ ++ + + + Y +P ++ + D+ ++A
Sbjct 181 AGCELQQLSAMLATLEQSVLCQIESASDIVTVLRYCSRPHEYIVQCAPFEMDELSLVLAD 240
Query 478 LMRDTESL 485
++ +S
Sbjct 241 VLNTHKSF 248
>8dgj_A A Endoribonuclease Dcr-1
Length=2249
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query 636 TRALVDALKNWIEGNPKLSFLKPGILTGR----GKTNQNTGMTLPAQKCILDAFKASGDH 691
R L + L +P L FL+ T R + + Q+ +L F+ D
Sbjct 505 ARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEVLKRFRMH-DC 563
Query 692 NILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTS 743
N+LI TSV +EGID+ +CNLV+ ++ +Q +GR RA + +L +
Sbjct 564 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVA 615
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 47/248 (19%), Positives = 110/248 (44%), Gaps = 17/248 (7%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKV-VFFANQ 299
F PR++Q+EL A + +NTIIC K F++L + + ++ + G+V V+ + +
Sbjct 15 FTPRDFQVELLATAYE-RNTIICLGHRSSKEFIALKLLQELSRR--ARRHGRVSVYLSCE 71
Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
+ + S+++ RV +P + + + IL P+ + L+
Sbjct 72 VGTSTEPCSIYTMLTHLTDLRV--WQEQPDMQIPFDHCWTDYHVSILRPEGFLYLLETRE 129
Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
+ LS L++ ++CH+++ Y I + + + P+++GL G +
Sbjct 130 L-LLSRVELIVLEDCHDSAV---YQRIRPLFENHIMPAPPADRPRILGL-----AGPLHS 180
Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVY--KPQKFFRKVESRISDKFKYIIAQ 477
L + + A+L+ SV+ ++ + + + Y +P ++ + D+ ++A
Sbjct 181 AGCELQQLSAMLATLEQSVLCQIESASDIVTVLRYCSRPHEYIVQCAPFEMDELSLVLAD 240
Query 478 LMRDTESL 485
++ +S
Sbjct 241 VLNTHKSF 248
>6bu9_A A Dicer-2, isoform A
Length=1724
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 6/140 (4%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFA 297
KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F
Sbjct 8 IKPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMC 66
Query 298 NQIPVYEQQKSVFSKYFE-RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356
N + + QQ + + G+ V ++ N +++ T Q
Sbjct 67 NTVELARQQAMAVRRCTNFKVGFYVGXXXXXXWTRGMWSDEIKKNQVLVGTAQXXXXXXX 126
Query 357 KGTIPSLSIFTLMIFDECHN 376
+LS +++I DECH+
Sbjct 127 X-XXXALSSLSVVIIDECHH 145
Score = 42.4 bits (98), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/65 (34%), Positives = 36/65 (55%), Gaps = 1/65 (2%)
Query 678 QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSK 737
QK + F+ G+ N++I +SV +EGID+ CN V + + +Q++GR R +K
Sbjct 445 QKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPXXXFNMYVQSKGRARTTEAK 503
Query 738 CFLLT 742
L T
Sbjct 504 FVLFT 508
>8alz_B B Activating signal cointegrator 1 complex subunit 3
Length=1806
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKK-FPQG----QKGKVVFFANQIPVYEQQKSVFSK 312
+N +ICAPTG GKT +++L H +++ F QG + K+V+ A + + FS+
Sbjct 97 ENMLICAPTGAGKTNIAMLTVLHEIRQHFQQGVIKKNEFKIVYVAPMKALAAEMTDYFSR 156
Query 313 YFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQI--LVNNLKKGTIPSLSIFTLMI 370
E G V ++G + + + +++ TP+ +V G + I L+I
Sbjct 157 RLEPLGIIVKELTGDMQLS---KSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVRLLI 213
Query 371 FDECH 375
DE H
Sbjct 214 LDEVH 218
>8y6o_I I Probable ATP-dependent RNA helicase DDX23
Length=820
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 97/228 (43%), Gaps = 31/228 (14%)
Query 524 QMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIE 583
Q PD DE K L + S KY ++ + A M A++ L + A +
Sbjct 575 QKPDTDEAEDPEKMLANFESGKHKYRQTVMFT--ATMPPAVERLARSYLRRPAVVYIGXA 632
Query 584 QDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDAL 643
+R E+K+ + +E+ K + L IL++ + + I+FV + D L
Sbjct 633 GKPHERVEQKVFLM--------SESEKRKKLLAILEQGF----DPPIIIFVNQKKGCDVL 680
Query 644 KNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEG 703
+E K+ + + G+G+ + ++ KA G +IL+AT VA G
Sbjct 681 AKSLE---KMGYNACTLHGGKGQEQREFALS---------NLKA-GAKDILVATDVAGRG 727
Query 704 IDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKC---FLLTSNAGV 747
IDI ++V+ Y+ N+ I GR GRA S FL ++ V
Sbjct 728 IDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAV 775
>2zj5_A A Putative ski2-type helicase
Length=720
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/162 (25%), Positives = 76/162 (47%), Gaps = 21/162 (13%)
Query 255 MKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYF 314
++GKN +I PT GKT ++ + H + Q GK V+ + E++ F +
Sbjct 37 LEGKNALISIPTASGKTLIAEIAMVHRI----LTQGGKAVYIVPLKALAEEKFQEFQDW- 91
Query 315 ERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDEC 374
E+ G RV + AT + ++ + DIII T + + L+ G+ + +++ DE
Sbjct 92 EKIGLRV---AMATGDYDSKDEWLGKYDIIIATAEKFDSLLRHGS-SWIKDVKILVADEI 147
Query 375 H---NTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVG 413
H + + +I+ + L + Q+IGL+A++G
Sbjct 148 HLIGSRDRGATLEVILAHMLGK---------AQIIGLSATIG 180
>2zj2_A A Putative ski2-type helicase
Length=720
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/162 (25%), Positives = 76/162 (47%), Gaps = 21/162 (13%)
Query 255 MKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYF 314
++GKN +I PT GKT ++ + H + Q GK V+ + E++ F +
Sbjct 37 LEGKNALISIPTASGKTLIAEIAMVHRILT----QGGKAVYIVPLKALAEEKFQEFQDW- 91
Query 315 ERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDEC 374
E+ G RV + AT + ++ + DIII T + + L+ G+ + +++ DE
Sbjct 92 EKIGLRV---AMATGDYDSKDEWLGKYDIIIATAEKFDSLLRHGS-SWIKDVKILVADEI 147
Query 375 H---NTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVG 413
H + + +I+ + L + Q+IGL+A++G
Sbjct 148 HLIGSRDRGATLEVILAHMLGK---------AQIIGLSATIG 180
>2zj8_A A Putative ski2-type helicase
Length=720
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/162 (25%), Positives = 76/162 (47%), Gaps = 21/162 (13%)
Query 255 MKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYF 314
++GKN +I PT GKT ++ + H + Q GK V+ + E++ F +
Sbjct 37 LEGKNALISIPTASGKTLIAEIAMVHRILT----QGGKAVYIVPLKALAEEKFQEFQDW- 91
Query 315 ERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDEC 374
E+ G RV + AT + ++ + DIII T + + L+ G+ + +++ DE
Sbjct 92 EKIGLRV---AMATGDYDSKDEWLGKYDIIIATAEKFDSLLRHGS-SWIKDVKILVADEI 147
Query 375 H---NTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVG 413
H + + +I+ + L + Q+IGL+A++G
Sbjct 148 HLIGSRDRGATLEVILAHMLGK---------AQIIGLSATIG 180
>2zja_A A Putative ski2-type helicase
Length=720
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/162 (25%), Positives = 76/162 (47%), Gaps = 21/162 (13%)
Query 255 MKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYF 314
++GKN +I PT GKT ++ + H + Q GK V+ + E++ F +
Sbjct 37 LEGKNALISIPTASGKTLIAEIAMVHRILT----QGGKAVYIVPLKALAEEKFQEFQDW- 91
Query 315 ERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDEC 374
E+ G RV + AT + ++ + DIII T + + L+ G+ + +++ DE
Sbjct 92 EKIGLRV---AMATGDYDSKDEWLGKYDIIIATAEKFDSLLRHGS-SWIKDVKILVADEI 147
Query 375 H---NTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVG 413
H + + +I+ + L + Q+IGL+A++G
Sbjct 148 HLIGSRDRGATLEVILAHMLGK---------AQIIGLSATIG 180
>7vpx_L E Probable ATP-dependent RNA helicase DDX46
Length=1031
Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/139 (27%), Positives = 62/139 (45%), Gaps = 7/139 (5%)
Query 242 KPRNYQLELALPA-MKGKNTIICAPTGCGKTFVSLLICEHHL---KKFPQGQKGKVVFFA 297
KP Q + A+PA M G++ I A TG GKT LL H+ + +G+ V
Sbjct 394 KPTPIQTQ-AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMT 452
Query 298 NQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL-- 355
+ Q K+ + G RV + G T + + ++ +II+ TP +++ L
Sbjct 453 PTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAA 512
Query 356 KKGTIPSLSIFTLMIFDEC 374
G + +L T ++ DE
Sbjct 513 NSGRVTNLRRVTYVVLDEA 531
>7evo_L E RNA helicase
Length=1052
Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/139 (27%), Positives = 62/139 (45%), Gaps = 7/139 (5%)
Query 242 KPRNYQLELALPA-MKGKNTIICAPTGCGKTFVSLLICEHHL---KKFPQGQKGKVVFFA 297
KP Q + A+PA M G++ I A TG GKT LL H+ + +G+ V
Sbjct 414 KPTPIQTQ-AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMT 472
Query 298 NQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL-- 355
+ Q K+ + G RV + G T + + ++ +II+ TP +++ L
Sbjct 473 PTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAA 532
Query 356 KKGTIPSLSIFTLMIFDEC 374
G + +L T ++ DE
Sbjct 533 NSGRVTNLRRVTYVVLDEA 551
>6y5q_F p Probable ATP-dependent RNA helicase DDX46
Length=1031
Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/139 (27%), Positives = 62/139 (45%), Gaps = 7/139 (5%)
Query 242 KPRNYQLELALPA-MKGKNTIICAPTGCGKTFVSLLICEHHL---KKFPQGQKGKVVFFA 297
KP Q + A+PA M G++ I A TG GKT LL H+ + +G+ V
Sbjct 394 KPTPIQTQ-AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMT 452
Query 298 NQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL-- 355
+ Q K+ + G RV + G T + + ++ +II+ TP +++ L
Sbjct 453 PTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAA 512
Query 356 KKGTIPSLSIFTLMIFDEC 374
G + +L T ++ DE
Sbjct 513 NSGRVTNLRRVTYVVLDEA 531
>8arp_A A ATP-dependent RNA helicase DBP2
Length=546
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 20/138 (14%)
Query 630 TILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687
T++F T+ + D + ++ +G P L+ G +Q + +L F+
Sbjct 363 TLIFASTKRMCDDITKYLREDGWPALAI--------HGDKDQR------ERDWVLQEFR- 407
Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNV---IKMIQTRGRGRARGSKCFLLTSN 744
+G I++AT VA GID+ N VI Y+ GN+ + I GR A G+ T
Sbjct 408 NGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQ 467
Query 745 AGVIEKEQINMYKEKMMN 762
+ + I++ +E N
Sbjct 468 NKGLGAKLISIMREANQN 485
Score = 40.4 bits (93), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 4/136 (3%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFP---QGQKGKVVFFAN 298
KP Q + A+ G++ + A TG GKT L H+ P G V+ A
Sbjct 135 KPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAP 194
Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358
+ Q ++ SK+ R T + G ++ + + ++I+I TP L++ L+ G
Sbjct 195 TRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIG 254
Query 359 TIPSLSIFTLMIFDEC 374
+L T ++ DE
Sbjct 255 KT-NLKRVTYLVLDEA 269
>8arp_F F ATP-dependent RNA helicase DBP2
Length=546
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 20/138 (14%)
Query 630 TILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687
T++F T+ + D + ++ +G P L+ G +Q + +L F+
Sbjct 363 TLIFASTKRMCDDITKYLREDGWPALAI--------HGDKDQR------ERDWVLQEFR- 407
Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNV---IKMIQTRGRGRARGSKCFLLTSN 744
+G I++AT VA GID+ N VI Y+ GN+ + I GR A G+ T
Sbjct 408 NGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQ 467
Query 745 AGVIEKEQINMYKEKMMN 762
+ + I++ +E N
Sbjct 468 NKGLGAKLISIMREANQN 485
Score = 40.4 bits (93), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 4/136 (3%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFP---QGQKGKVVFFAN 298
KP Q + A+ G++ + A TG GKT L H+ P G V+ A
Sbjct 135 KPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAP 194
Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358
+ Q ++ SK+ R T + G ++ + + ++I+I TP L++ L+ G
Sbjct 195 TRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIG 254
Query 359 TIPSLSIFTLMIFDEC 374
+L T ++ DE
Sbjct 255 KT-NLKRVTYLVLDEA 269
>8arp_C C ATP-dependent RNA helicase DBP2
Length=546
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 20/138 (14%)
Query 630 TILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687
T++F T+ + D + ++ +G P L+ G +Q + +L F+
Sbjct 363 TLIFASTKRMCDDITKYLREDGWPALAI--------HGDKDQR------ERDWVLQEFR- 407
Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNV---IKMIQTRGRGRARGSKCFLLTSN 744
+G I++AT VA GID+ N VI Y+ GN+ + I GR A G+ T
Sbjct 408 NGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQ 467
Query 745 AGVIEKEQINMYKEKMMN 762
+ + I++ +E N
Sbjct 468 NKGLGAKLISIMREANQN 485
Score = 40.4 bits (93), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 4/136 (3%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFP---QGQKGKVVFFAN 298
KP Q + A+ G++ + A TG GKT L H+ P G V+ A
Sbjct 135 KPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAP 194
Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358
+ Q ++ SK+ R T + G ++ + + ++I+I TP L++ L+ G
Sbjct 195 TRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIG 254
Query 359 TIPSLSIFTLMIFDEC 374
+L T ++ DE
Sbjct 255 KT-NLKRVTYLVLDEA 269
>8ark_A A ATP-dependent RNA helicase DBP2
Length=546
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 20/138 (14%)
Query 630 TILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687
T++F T+ + D + ++ +G P L+ G +Q + +L F+
Sbjct 363 TLIFASTKRMCDDITKYLREDGWPALAI--------HGDKDQR------ERDWVLQEFR- 407
Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNV---IKMIQTRGRGRARGSKCFLLTSN 744
+G I++AT VA GID+ N VI Y+ GN+ + I GR A G+ T
Sbjct 408 NGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQ 467
Query 745 AGVIEKEQINMYKEKMMN 762
+ + I++ +E N
Sbjct 468 NKGLGAKLISIMREANQN 485
Score = 40.4 bits (93), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 4/136 (3%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFP---QGQKGKVVFFAN 298
KP Q + A+ G++ + A TG GKT L H+ P G V+ A
Sbjct 135 KPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAP 194
Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358
+ Q ++ SK+ R T + G ++ + + ++I+I TP L++ L+ G
Sbjct 195 TRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIG 254
Query 359 TIPSLSIFTLMIFDEC 374
+L T ++ DE
Sbjct 255 KT-NLKRVTYLVLDEA 269
>8ark_B B ATP-dependent RNA helicase DBP2
Length=546
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 20/138 (14%)
Query 630 TILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687
T++F T+ + D + ++ +G P L+ G +Q + +L F+
Sbjct 363 TLIFASTKRMCDDITKYLREDGWPALAI--------HGDKDQR------ERDWVLQEFR- 407
Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNV---IKMIQTRGRGRARGSKCFLLTSN 744
+G I++AT VA GID+ N VI Y+ GN+ + I GR A G+ T
Sbjct 408 NGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQ 467
Query 745 AGVIEKEQINMYKEKMMN 762
+ + I++ +E N
Sbjct 468 NKGLGAKLISIMREANQN 485
Score = 40.4 bits (93), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 4/136 (3%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFP---QGQKGKVVFFAN 298
KP Q + A+ G++ + A TG GKT L H+ P G V+ A
Sbjct 135 KPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAP 194
Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358
+ Q ++ SK+ R T + G ++ + + ++I+I TP L++ L+ G
Sbjct 195 TRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIG 254
Query 359 TIPSLSIFTLMIFDEC 374
+L T ++ DE
Sbjct 255 KT-NLKRVTYLVLDEA 269
>8arp_E E ATP-dependent RNA helicase DBP2
Length=546
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 20/138 (14%)
Query 630 TILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687
T++F T+ + D + ++ +G P L+ G +Q + +L F+
Sbjct 363 TLIFASTKRMCDDITKYLREDGWPALAI--------HGDKDQR------ERDWVLQEFR- 407
Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNV---IKMIQTRGRGRARGSKCFLLTSN 744
+G I++AT VA GID+ N VI Y+ GN+ + I GR A G+ T
Sbjct 408 NGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQ 467
Query 745 AGVIEKEQINMYKEKMMN 762
+ + I++ +E N
Sbjct 468 NKGLGAKLISIMREANQN 485
Score = 40.4 bits (93), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 4/136 (3%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFP---QGQKGKVVFFAN 298
KP Q + A+ G++ + A TG GKT L H+ P G V+ A
Sbjct 135 KPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAP 194
Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358
+ Q ++ SK+ R T + G ++ + + ++I+I TP L++ L+ G
Sbjct 195 TRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIG 254
Query 359 TIPSLSIFTLMIFDEC 374
+L T ++ DE
Sbjct 255 KT-NLKRVTYLVLDEA 269
>8arp_D D ATP-dependent RNA helicase DBP2
Length=546
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 20/138 (14%)
Query 630 TILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687
T++F T+ + D + ++ +G P L+ G +Q + +L F+
Sbjct 363 TLIFASTKRMCDDITKYLREDGWPALAI--------HGDKDQR------ERDWVLQEFR- 407
Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNV---IKMIQTRGRGRARGSKCFLLTSN 744
+G I++AT VA GID+ N VI Y+ GN+ + I GR A G+ T
Sbjct 408 NGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQ 467
Query 745 AGVIEKEQINMYKEKMMN 762
+ + I++ +E N
Sbjct 468 NKGLGAKLISIMREANQN 485
Score = 40.4 bits (93), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 4/136 (3%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFP---QGQKGKVVFFAN 298
KP Q + A+ G++ + A TG GKT L H+ P G V+ A
Sbjct 135 KPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAP 194
Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358
+ Q ++ SK+ R T + G ++ + + ++I+I TP L++ L+ G
Sbjct 195 TRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIG 254
Query 359 TIPSLSIFTLMIFDEC 374
+L T ++ DE
Sbjct 255 KT-NLKRVTYLVLDEA 269
>8arp_B B ATP-dependent RNA helicase DBP2
Length=546
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 20/138 (14%)
Query 630 TILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687
T++F T+ + D + ++ +G P L+ G +Q + +L F+
Sbjct 363 TLIFASTKRMCDDITKYLREDGWPALAI--------HGDKDQR------ERDWVLQEFR- 407
Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNV---IKMIQTRGRGRARGSKCFLLTSN 744
+G I++AT VA GID+ N VI Y+ GN+ + I GR A G+ T
Sbjct 408 NGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQ 467
Query 745 AGVIEKEQINMYKEKMMN 762
+ + I++ +E N
Sbjct 468 NKGLGAKLISIMREANQN 485
Score = 40.4 bits (93), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 4/136 (3%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFP---QGQKGKVVFFAN 298
KP Q + A+ G++ + A TG GKT L H+ P G V+ A
Sbjct 135 KPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAP 194
Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358
+ Q ++ SK+ R T + G ++ + + ++I+I TP L++ L+ G
Sbjct 195 TRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIG 254
Query 359 TIPSLSIFTLMIFDEC 374
+L T ++ DE
Sbjct 255 KT-NLKRVTYLVLDEA 269
>6y53_D p Probable ATP-dependent RNA helicase DDX46
Length=1031
Score = 42.4 bits (98), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/138 (27%), Positives = 62/138 (45%), Gaps = 7/138 (5%)
Query 242 KPRNYQLELALPA-MKGKNTIICAPTGCGKTFVSLLICEHHL---KKFPQGQKGKVVFFA 297
KP Q + A+PA M G++ I A TG GKT LL H+ + +G+ V
Sbjct 394 KPTPIQTQ-AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMT 452
Query 298 NQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL-- 355
+ Q K+ + G RV + G T + + ++ +II+ TP +++ L
Sbjct 453 PTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAA 512
Query 356 KKGTIPSLSIFTLMIFDE 373
G + +L T ++ DE
Sbjct 513 NSGRVTNLRRVTYVVLDE 530
>8dga_A A Endoribonuclease Dcr-1
Length=2249
Score = 42.4 bits (98), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/248 (19%), Positives = 110/248 (44%), Gaps = 17/248 (7%)
Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKV-VFFANQ 299
F PR++Q+EL A + +NTIIC K F++L + + ++ + G+V V+ + +
Sbjct 15 FTPRDFQVELLATAYE-RNTIICLGHRSSKEFIALKLLQELSRR--ARRHGRVSVYLSCE 71
Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
+ + S+++ RV +P + + + IL P+ + L+
Sbjct 72 VGTSTEPCSIYTMLTHLTDLRV--WQEQPDMQIPFDHCWTDYHVSILRPEGFLYLLETRE 129
Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419
+ LS L++ ++CH+++ Y I + + + P+++GL G +
Sbjct 130 L-LLSRVELIVLEDCHDSAV---YQRIRPLFENHIMPAPPADRPRILGL-----AGPLHS 180
Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVY--KPQKFFRKVESRISDKFKYIIAQ 477
L + + A+L+ SV+ ++ + + + Y +P ++ + D+ ++A
Sbjct 181 AGCELQQLSAMLATLEQSVLCQIESASDIVTVLRYCSRPHEYIVQCAPFEMDELSLVLAD 240
Query 478 LMRDTESL 485
++ +S
Sbjct 241 VLNTHKSF 248
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 0/50 (0%)
Query 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTS 743
LI TSV +EGID+ +CNLV+ ++ +Q +GR RA + +L +
Sbjct 566 LIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVA 615
>3jcm_I N Pre-mRNA-splicing helicase BRR2
Length=2163
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 49/199 (25%), Positives = 90/199 (45%), Gaps = 30/199 (15%)
Query 228 PPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC----EHHL 282
P SE + N P + + + A +G N +ICAPTG GKT ++LL HH
Sbjct 492 PSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKALSHHY 543
Query 283 KKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQI 337
P+ +K K+V+ A + ++Q F + G +V ++G + + +QI
Sbjct 544 N--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLSRKQI 599
Query 338 VENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFNYLDQ 393
E +++ TP+ + + + + L+I DE H + P +++ +
Sbjct 600 DETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVARTFWAS 658
Query 394 KLGGSSGPLPQVIGLTASV 412
K G P++IGL+A++
Sbjct 659 KYGQE---YPRIIGLSATL 674
>5m5p_A A Pre-mRNA-splicing helicase BRR2
Length=1897
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%)
Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278
+ + P SE + N P + + + A +G N +ICAPTG GKT ++LL
Sbjct 222 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 273
Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333
HH P+ +K K+V+ A + ++Q F + G +V ++G + +
Sbjct 274 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 329
Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389
+QI E +++ TP+ + + + + L+I DE H + P +++
Sbjct 330 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 388
Query 390 YLDQKLGGSSGPLPQVIGLTASV 412
+ K G P++IGL+A++
Sbjct 389 FWASKYGQE---YPRIIGLSATL 408
>5dca_A A Pre-mRNA-splicing helicase BRR2
Length=1948
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%)
Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278
+ + P SE + N P + + + A +G N +ICAPTG GKT ++LL
Sbjct 285 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 336
Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333
HH P+ +K K+V+ A + ++Q F + G +V ++G + +
Sbjct 337 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 392
Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389
+QI E +++ TP+ + + + + L+I DE H + P +++
Sbjct 393 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 451
Query 390 YLDQKLGGSSGPLPQVIGLTASV 412
+ K G P++IGL+A++
Sbjct 452 FWASKYGQE---YPRIIGLSATL 471
>5m5p_C C Pre-mRNA-splicing helicase BRR2
Length=1897
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%)
Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278
+ + P SE + N P + + + A +G N +ICAPTG GKT ++LL
Sbjct 222 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 273
Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333
HH P+ +K K+V+ A + ++Q F + G +V ++G + +
Sbjct 274 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 329
Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389
+QI E +++ TP+ + + + + L+I DE H + P +++
Sbjct 330 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 388
Query 390 YLDQKLGGSSGPLPQVIGLTASV 412
+ K G P++IGL+A++
Sbjct 389 FWASKYGQE---YPRIIGLSATL 408
>5a9f_A A DNA POLYMERASE THETA
Length=830
Score = 42.0 bits (97), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%)
Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313
++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K
Sbjct 41 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 96
Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370
F+ G +V G G+T+ + + DI + T L+N L + + + +++
Sbjct 97 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 150
Query 371 FDECHNTSKQH 381
DE H H
Sbjct 151 VDELHMLGDSH 161
>5lqw_C C Pre-mRNA-splicing helicase BRR2
Length=2163
Score = 42.0 bits (97), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%)
Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278
+ + P SE + N P + + + A +G N +ICAPTG GKT ++LL
Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539
Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333
HH P+ +K K+V+ A + ++Q F + G +V ++G + +
Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595
Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389
+QI E +++ TP+ + + + + L+I DE H + P +++
Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654
Query 390 YLDQKLGGSSGPLPQVIGLTASV 412
+ K G P++IGL+A++
Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>9bha_A A DNA polymerase theta
Length=893
Score = 42.0 bits (97), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%)
Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313
++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K
Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159
Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370
F+ G +V G G+T+ + + DI + T L+N L + + + +++
Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213
Query 371 FDECHNTSKQH 381
DE H H
Sbjct 214 VDELHMLGDSH 224
>9bha_B B DNA polymerase theta
Length=893
Score = 42.0 bits (97), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%)
Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313
++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K
Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159
Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370
F+ G +V G G+T+ + + DI + T L+N L + + + +++
Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213
Query 371 FDECHNTSKQH 381
DE H H
Sbjct 214 VDELHMLGDSH 224
>5m52_A A Pre-mRNA-splicing helicase BRR2
Length=2163
Score = 42.0 bits (97), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%)
Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278
+ + P SE + N P + + + A +G N +ICAPTG GKT ++LL
Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539
Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333
HH P+ +K K+V+ A + ++Q F + G +V ++G + +
Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595
Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389
+QI E +++ TP+ + + + + L+I DE H + P +++
Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654
Query 390 YLDQKLGGSSGPLPQVIGLTASV 412
+ K G P++IGL+A++
Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>5gan_I B Pre-mRNA-splicing helicase BRR2
Length=2163
Score = 42.0 bits (97), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%)
Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278
+ + P SE + N P + + + A +G N +ICAPTG GKT ++LL
Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539
Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333
HH P+ +K K+V+ A + ++Q F + G +V ++G + +
Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595
Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389
+QI E +++ TP+ + + + + L+I DE H + P +++
Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654
Query 390 YLDQKLGGSSGPLPQVIGLTASV 412
+ K G P++IGL+A++
Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>5m52_C B Pre-mRNA-splicing helicase BRR2
Length=2163
Score = 42.0 bits (97), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%)
Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278
+ + P SE + N P + + + A +G N +ICAPTG GKT ++LL
Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539
Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333
HH P+ +K K+V+ A + ++Q F + G +V ++G + +
Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595
Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389
+QI E +++ TP+ + + + + L+I DE H + P +++
Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654
Query 390 YLDQKLGGSSGPLPQVIGLTASV 412
+ K G P++IGL+A++
Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>9bh9_A A DNA polymerase theta
Length=893
Score = 42.0 bits (97), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%)
Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313
++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K
Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159
Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370
F+ G +V G G+T+ + + DI + T L+N L + + + +++
Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213
Query 371 FDECHNTSKQH 381
DE H H
Sbjct 214 VDELHMLGDSH 224
>9bh9_B B DNA polymerase theta
Length=893
Score = 42.0 bits (97), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%)
Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313
++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K
Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159
Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370
F+ G +V G G+T+ + + DI + T L+N L + + + +++
Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213
Query 371 FDECHNTSKQH 381
DE H H
Sbjct 214 VDELHMLGDSH 224
>9bh8_A A DNA polymerase theta
Length=893
Score = 42.0 bits (97), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%)
Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313
++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K
Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159
Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370
F+ G +V G G+T+ + + DI + T L+N L + + + +++
Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213
Query 371 FDECHNTSKQH 381
DE H H
Sbjct 214 VDELHMLGDSH 224
>9bh8_B B DNA polymerase theta
Length=893
Score = 42.0 bits (97), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%)
Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313
++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K
Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159
Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370
F+ G +V G G+T+ + + DI + T L+N L + + + +++
Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213
Query 371 FDECHNTSKQH 381
DE H H
Sbjct 214 VDELHMLGDSH 224
>5aga_A A DNA POLYMERASE THETA
Length=830
Score = 42.0 bits (97), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%)
Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313
++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K
Sbjct 41 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 96
Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370
F+ G +V G G+T+ + + DI + T L+N L + + + +++
Sbjct 97 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 150
Query 371 FDECHNTSKQH 381
DE H H
Sbjct 151 VDELHMLGDSH 161
>5gm6_B B Pre-mRNA-splicing helicase BRR2
Length=2163
Score = 42.0 bits (97), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%)
Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278
+ + P SE + N P + + + A +G N +ICAPTG GKT ++LL
Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539
Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333
HH P+ +K K+V+ A + ++Q F + G +V ++G + +
Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595
Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389
+QI E +++ TP+ + + + + L+I DE H + P +++
Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654
Query 390 YLDQKLGGSSGPLPQVIGLTASV 412
+ K G P++IGL+A++
Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>6uv1_A A Probable ATP-dependent RNA helicase DDX17
Length=448
Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 17/115 (15%)
Query 618 LQEEYHLNPETITILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTL 675
L EE E TI+FV+T+ D L + +G P + G +Q
Sbjct 301 LMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCI--------HGDKSQ------ 346
Query 676 PAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
P + +L+ F+ SG ILIAT VA G+D+ VI Y+Y + + GR
Sbjct 347 PERDWVLNEFR-SGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGR 400
>4bgd_A A PRE-MRNA-SPLICING HELICASE BRR2
Length=1722
Score = 42.0 bits (97), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%)
Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278
+ + P SE + N P + + + A +G N +ICAPTG GKT ++LL
Sbjct 47 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 98
Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333
HH P+ +K K+V+ A + ++Q F + G +V ++G + +
Sbjct 99 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 154
Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389
+QI E +++ TP+ + + + + L+I DE H + P +++
Sbjct 155 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 213
Query 390 YLDQKLGGSSGPLPQVIGLTASV 412
+ K G P++IGL+A++
Sbjct 214 FWASKYGQE---YPRIIGLSATL 233
>5gao_I B Pre-mRNA-splicing helicase BRR2
Length=2163
Score = 42.0 bits (97), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%)
Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278
+ + P SE + N P + + + A +G N +ICAPTG GKT ++LL
Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539
Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333
HH P+ +K K+V+ A + ++Q F + G +V ++G + +
Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595
Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389
+QI E +++ TP+ + + + + L+I DE H + P +++
Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654
Query 390 YLDQKLGGSSGPLPQVIGLTASV 412
+ K G P++IGL+A++
Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>5lj5_G B Pre-mRNA-splicing helicase BRR2
Length=2163
Score = 42.0 bits (97), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%)
Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278
+ + P SE + N P + + + A +G N +ICAPTG GKT ++LL
Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539
Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333
HH P+ +K K+V+ A + ++Q F + G +V ++G + +
Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595
Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389
+QI E +++ TP+ + + + + L+I DE H + P +++
Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654
Query 390 YLDQKLGGSSGPLPQVIGLTASV 412
+ K G P++IGL+A++
Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>7b9v_E B Pre-mRNA-splicing helicase BRR2
Length=2163
Score = 42.0 bits (97), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%)
Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278
+ + P SE + N P + + + A +G N +ICAPTG GKT ++LL
Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539
Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333
HH P+ +K K+V+ A + ++Q F + G +V ++G + +
Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595
Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389
+QI E +++ TP+ + + + + L+I DE H + P +++
Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654
Query 390 YLDQKLGGSSGPLPQVIGLTASV 412
+ K G P++IGL+A++
Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>5a9j_C C DNA POLYMERASE THETA
Length=896
Score = 42.0 bits (97), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%)
Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313
++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K
Sbjct 107 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 162
Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370
F+ G +V G G+T+ + + DI + T L+N L + + + +++
Sbjct 163 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 216
Query 371 FDECHNTSKQH 381
DE H H
Sbjct 217 VDELHMLGDSH 227
>5zwm_AA D Pre-mRNA-splicing helicase BRR2
Length=2163
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%)
Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278
+ + P SE + N P + + + A +G N +ICAPTG GKT ++LL
Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539
Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333
HH P+ +K K+V+ A + ++Q F + G +V ++G + +
Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595
Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389
+QI E +++ TP+ + + + + L+I DE H + P +++
Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654
Query 390 YLDQKLGGSSGPLPQVIGLTASV 412
+ K G P++IGL+A++
Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>5nrl_I B Pre-mRNA-splicing helicase BRR2
Length=2163
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%)
Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278
+ + P SE + N P + + + A +G N +ICAPTG GKT ++LL
Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539
Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333
HH P+ +K K+V+ A + ++Q F + G +V ++G + +
Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595
Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389
+QI E +++ TP+ + + + + L+I DE H + P +++
Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654
Query 390 YLDQKLGGSSGPLPQVIGLTASV 412
+ K G P++IGL+A++
Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>5zwo_AA D Pre-mRNA-splicing helicase BRR2
Length=2163
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%)
Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278
+ + P SE + N P + + + A +G N +ICAPTG GKT ++LL
Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539
Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333
HH P+ +K K+V+ A + ++Q F + G +V ++G + +
Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595
Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389
+QI E +++ TP+ + + + + L+I DE H + P +++
Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654
Query 390 YLDQKLGGSSGPLPQVIGLTASV 412
+ K G P++IGL+A++
Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>9bh7_B B DNA polymerase theta
Length=893
Score = 41.6 bits (96), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%)
Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313
++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K
Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159
Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370
F+ G +V G G+T+ + + DI + T L+N L + + + +++
Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213
Query 371 FDECHNTSKQH 381
DE H H
Sbjct 214 VDELHMLGDSH 224
>9bh7_A A DNA polymerase theta
Length=893
Score = 41.6 bits (96), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%)
Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313
++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K
Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159
Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370
F+ G +V G G+T+ + + DI + T L+N L + + + +++
Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213
Query 371 FDECHNTSKQH 381
DE H H
Sbjct 214 VDELHMLGDSH 224
>5a9j_B B DNA POLYMERASE THETA
Length=896
Score = 41.6 bits (96), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%)
Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313
++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K
Sbjct 107 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 162
Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370
F+ G +V G G+T+ + + DI + T L+N L + + + +++
Sbjct 163 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 216
Query 371 FDECHNTSKQH 381
DE H H
Sbjct 217 VDELHMLGDSH 227
>6uv1_B B Probable ATP-dependent RNA helicase DDX17
Length=448
Score = 41.6 bits (96), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 17/115 (15%)
Query 618 LQEEYHLNPETITILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTL 675
L EE E TI+FV+T+ D L + +G P + G +Q
Sbjct 301 LMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCI--------HGDKSQ------ 346
Query 676 PAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
P + +L+ F+ SG ILIAT VA G+D+ VI Y+Y + + GR
Sbjct 347 PERDWVLNEFR-SGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGR 400
>6uv2_A A Probable ATP-dependent RNA helicase DDX17
Length=448
Score = 41.6 bits (96), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 17/115 (15%)
Query 618 LQEEYHLNPETITILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTL 675
L EE E TI+FV+T+ D L + +G P + G +Q
Sbjct 301 LMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCI--------HGDKSQ------ 346
Query 676 PAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
P + +L+ F+ SG ILIAT VA G+D+ VI Y+Y + + GR
Sbjct 347 PERDWVLNEFR-SGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGR 400
>9bh6_A A DNA polymerase theta
Length=893
Score = 41.6 bits (96), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%)
Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313
++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K
Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159
Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370
F+ G +V G G+T+ + + DI + T L+N L + + + +++
Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213
Query 371 FDECHNTSKQH 381
DE H H
Sbjct 214 VDELHMLGDSH 224
>9bh6_D D DNA polymerase theta
Length=893
Score = 41.6 bits (96), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%)
Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313
++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K
Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159
Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370
F+ G +V G G+T+ + + DI + T L+N L + + + +++
Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213
Query 371 FDECHNTSKQH 381
DE H H
Sbjct 214 VDELHMLGDSH 224
>9bh6_B B DNA polymerase theta
Length=893
Score = 41.6 bits (96), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%)
Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313
++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K
Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159
Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370
F+ G +V G G+T+ + + DI + T L+N L + + + +++
Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213
Query 371 FDECHNTSKQH 381
DE H H
Sbjct 214 VDELHMLGDSH 224
>9bh6_C C DNA polymerase theta
Length=893
Score = 41.6 bits (96), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%)
Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313
++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K
Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159
Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370
F+ G +V G G+T+ + + DI + T L+N L + + + +++
Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213
Query 371 FDECHNTSKQH 381
DE H H
Sbjct 214 VDELHMLGDSH 224
>5a9j_D D DNA POLYMERASE THETA
Length=896
Score = 41.6 bits (96), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%)
Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313
++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K
Sbjct 107 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 162
Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370
F+ G +V G G+T+ + + DI + T L+N L + + + +++
Sbjct 163 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 216
Query 371 FDECHNTSKQH 381
DE H H
Sbjct 217 VDELHMLGDSH 227
>4kbf_A A Heat resistant RNA dependent ATPase
Length=365
Score = 41.2 bits (95), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 79/185 (43%), Gaps = 34/185 (18%)
Query 563 ALDYLKDF---FSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNE----NPKLEDLC 615
ALDYL+ S V A DE ++ L+ FEE+++ L S + PS + + L
Sbjct 131 ALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSAT-PPSRQTLLFSATLPSWA 189
Query 616 FILQEEYHLNPETITIL-----FVKTRALVDALKNWIEGNPKLSFL----KPGILTGRGK 666
L E Y NP I ++ + A+ ++ +E L ++ + + T
Sbjct 190 KRLAERYMKNPVLINVIKDEPVTYEEEAVPAPVRGRLEVLSDLLYVASPDRAMVFTRTKA 249
Query 667 TNQNTGMTL-----PAQKC-----------ILDAFKASGDHNILIATSVADEGIDIAQCN 710
+ L PAQ +L AF+ G+ +L+AT VA G+DI Q +
Sbjct 250 ETEEIAQGLLRLGHPAQALHGDLSQGERERVLGAFR-QGEVRVLVATDVAARGLDIPQVD 308
Query 711 LVILY 715
LV+ Y
Sbjct 309 LVVHY 313
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/127 (28%), Positives = 58/127 (46%), Gaps = 7/127 (6%)
Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308
ALP A++GK+ I A TG GKT +L I E +G+K + + P E
Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVL---TPTRELALQ 87
Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367
V S+ + +V + G T E ++ D ++ TP ++ L++G + LS
Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146
Query 368 LMIFDEC 374
+ + DE
Sbjct 147 VAVLDEA 153
>4kbf_B B Heat resistant RNA dependent ATPase
Length=365
Score = 41.2 bits (95), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 79/185 (43%), Gaps = 34/185 (18%)
Query 563 ALDYLKDF---FSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNE----NPKLEDLC 615
ALDYL+ S V A DE ++ L+ FEE+++ L S + PS + + L
Sbjct 131 ALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSAT-PPSRQTLLFSATLPSWA 189
Query 616 FILQEEYHLNPETITIL-----FVKTRALVDALKNWIEGNPKLSFL----KPGILTGRGK 666
L E Y NP I ++ + A+ ++ +E L ++ + + T
Sbjct 190 KRLAERYMKNPVLINVIKDEPVTYEEEAVPAPVRGRLEVLSDLLYVASPDRAMVFTRTKA 249
Query 667 TNQNTGMTL-----PAQKC-----------ILDAFKASGDHNILIATSVADEGIDIAQCN 710
+ L PAQ +L AF+ G+ +L+AT VA G+DI Q +
Sbjct 250 ETEEIAQGLLRLGHPAQALHGDLSQGERERVLGAFR-QGEVRVLVATDVAARGLDIPQVD 308
Query 711 LVILY 715
LV+ Y
Sbjct 309 LVVHY 313
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/127 (28%), Positives = 58/127 (46%), Gaps = 7/127 (6%)
Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308
ALP A++GK+ I A TG GKT +L I E +G+K + + P E
Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVL---TPTRELALQ 87
Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367
V S+ + +V + G T E ++ D ++ TP ++ L++G + LS
Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146
Query 368 LMIFDEC 374
+ + DE
Sbjct 147 VAVLDEA 153
>4kbg_B B Heat resistant RNA dependent ATPase
Length=365
Score = 41.2 bits (95), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 79/185 (43%), Gaps = 34/185 (18%)
Query 563 ALDYLKDF---FSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNE----NPKLEDLC 615
ALDYL+ S V A DE ++ L+ FEE+++ L S + PS + + L
Sbjct 131 ALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSAT-PPSRQTLLFSATLPSWA 189
Query 616 FILQEEYHLNPETITIL-----FVKTRALVDALKNWIEGNPKLSFL----KPGILTGRGK 666
L E Y NP I ++ + A+ ++ +E L ++ + + T
Sbjct 190 KRLAERYMKNPVLINVIKDEPVTYEEEAVPAPVRGRLEVLSDLLYVASPDRAMVFTRTKA 249
Query 667 TNQNTGMTL-----PAQKC-----------ILDAFKASGDHNILIATSVADEGIDIAQCN 710
+ L PAQ +L AF+ G+ +L+AT VA G+DI Q +
Sbjct 250 ETEEIAQGLLRLGHPAQALHGDLSQGERERVLGAFR-QGEVRVLVATDVAARGLDIPQVD 308
Query 711 LVILY 715
LV+ Y
Sbjct 309 LVVHY 313
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/127 (28%), Positives = 58/127 (46%), Gaps = 7/127 (6%)
Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308
ALP A++GK+ I A TG GKT +L I E +G+K + + P E
Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVL---TPTRELALQ 87
Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367
V S+ + +V + G T E ++ D ++ TP ++ L++G + LS
Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146
Query 368 LMIFDEC 374
+ + DE
Sbjct 147 VAVLDEA 153
>5a9j_A A DNA POLYMERASE THETA
Length=896
Score = 41.6 bits (96), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%)
Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313
++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K
Sbjct 107 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 162
Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370
F+ G +V G G+T+ + + DI + T L+N L + + + +++
Sbjct 163 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 216
Query 371 FDECHNTSKQH 381
DE H H
Sbjct 217 VDELHMLGDSH 227
>7dco_D D BRR2 isoform 1
Length=2163
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%)
Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278
+ + P SE + N P + + + A +G N +ICAPTG GKT ++LL
Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539
Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333
HH P+ +K K+V+ A + ++Q F + G +V ++G + +
Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595
Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389
+QI E +++ TP+ + + + + L+I DE H + P +++
Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654
Query 390 YLDQKLGGSSGPLPQVIGLTASV 412
+ K G P++IGL+A++
Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>6uv4_A A Probable ATP-dependent RNA helicase DDX17
Length=448
Score = 41.2 bits (95), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 17/115 (15%)
Query 618 LQEEYHLNPETITILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTL 675
L EE E TI+FV+T+ D L + +G P + G +Q
Sbjct 301 LMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCI--------HGDKSQ------ 346
Query 676 PAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
P + +L+ F+ SG ILIAT VA G+D+ VI Y+Y + + GR
Sbjct 347 PERDWVLNEFR-SGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGR 400
>6uv3_A A Probable ATP-dependent RNA helicase DDX17
Length=448
Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 17/115 (15%)
Query 618 LQEEYHLNPETITILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTL 675
L EE E TI+FV+T+ D L + +G P + G +Q
Sbjct 301 LMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCI--------HGDKSQ------ 346
Query 676 PAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
P + +L+ F+ SG ILIAT VA G+D+ VI Y+Y + + GR
Sbjct 347 PERDWVLNEFR-SGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGR 400
>2z0m_A A 337aa long hypothetical ATP-dependent RNA helicase deaD
Length=337
Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/127 (30%), Positives = 56/127 (44%), Gaps = 17/127 (13%)
Query 252 LPAM-KGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVF 310
+P M +GKN ++ A TG GKT + + G K VV P E + V
Sbjct 25 IPLMLQGKNVVVRAKTGSGKT------AAYAIPILELGMKSLVV-----TPTRELTRQVA 73
Query 311 SKYFERHGY---RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367
S + Y +V + G + + V N DI++ TP L++ KG I LS F
Sbjct 74 SHIRDIGRYMDTKVAEVYGGMPYKAQINR-VRNADIVVATPGRLLDLWSKGVI-DLSSFE 131
Query 368 LMIFDEC 374
++I DE
Sbjct 132 IVIIDEA 138
>6znq_A A Uncharacterized ATP-dependent helicase YprA
Length=751
Score = 41.2 bits (95), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 8/122 (7%)
Query 630 TILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASG 689
TI+F ++R V+ + + I+ +L + G + RG G LP ++ ++ G
Sbjct 293 TIVFARSRVRVEIILSHIQ---ELVKKEIGTKSIRGYR----GGYLPKERREIERGLREG 345
Query 690 DHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVI 748
D +++T+ + G+DI Q + ++ Y G+V Q GR GR G ++ +N+ I
Sbjct 346 DILGVVSTNALELGVDIGQLQVCVMTGYPGSVASAWQQAGRAGRRHGESLIIMVANSTPI 405
Query 749 EK 750
++
Sbjct 406 DQ 407
>6znp_A A Uncharacterized ATP-dependent helicase YprA
Length=751
Score = 41.2 bits (95), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 8/122 (7%)
Query 630 TILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASG 689
TI+F ++R V+ + + I+ +L + G + RG G LP ++ ++ G
Sbjct 293 TIVFARSRVRVEIILSHIQ---ELVKKEIGTKSIRGYR----GGYLPKERREIERGLREG 345
Query 690 DHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVI 748
D +++T+ + G+DI Q + ++ Y G+V Q GR GR G ++ +N+ I
Sbjct 346 DILGVVSTNALELGVDIGQLQVCVMTGYPGSVASAWQQAGRAGRRHGESLIIMVANSTPI 405
Query 749 EK 750
++
Sbjct 406 DQ 407
>6znq_B B Uncharacterized ATP-dependent helicase YprA
Length=751
Score = 40.8 bits (94), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 8/122 (7%)
Query 630 TILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASG 689
TI+F ++R V+ + + I+ +L + G + RG G LP ++ ++ G
Sbjct 293 TIVFARSRVRVEIILSHIQ---ELVKKEIGTKSIRGYR----GGYLPKERREIERGLREG 345
Query 690 DHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVI 748
D +++T+ + G+DI Q + ++ Y G+V Q GR GR G ++ +N+ I
Sbjct 346 DILGVVSTNALELGVDIGQLQVCVMTGYPGSVASAWQQAGRAGRRHGESLIIMVANSTPI 405
Query 749 EK 750
++
Sbjct 406 DQ 407
>6znp_B B Uncharacterized ATP-dependent helicase YprA
Length=751
Score = 40.8 bits (94), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 8/122 (7%)
Query 630 TILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASG 689
TI+F ++R V+ + + I+ +L + G + RG G LP ++ ++ G
Sbjct 293 TIVFARSRVRVEIILSHIQ---ELVKKEIGTKSIRGYR----GGYLPKERREIERGLREG 345
Query 690 DHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVI 748
D +++T+ + G+DI Q + ++ Y G+V Q GR GR G ++ +N+ I
Sbjct 346 DILGVVSTNALELGVDIGQLQVCVMTGYPGSVASAWQQAGRAGRRHGESLIIMVANSTPI 405
Query 749 EK 750
++
Sbjct 406 DQ 407
>8ark_C C ATP-dependent RNA helicase DBP2
Length=546
Score = 40.4 bits (93), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 4/136 (3%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFP---QGQKGKVVFFAN 298
KP Q + A+ G++ + A TG GKT L H+ P G V+ A
Sbjct 135 KPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAP 194
Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358
+ Q ++ SK+ R T + G ++ + + ++I+I TP L++ L+ G
Sbjct 195 TRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIG 254
Query 359 TIPSLSIFTLMIFDEC 374
+L T ++ DE
Sbjct 255 KT-NLKRVTYLVLDEA 269
>8he5_O O DNA repair protein
Length=1094
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 12/114 (11%)
Query 630 TILFVKTRALVDALKNWIE-----GNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDA 684
T+LF +TR ++D L++++E G + F+ L G T ++ ++ ++D
Sbjct 677 TLLFTQTRQMLDILESFLERLNAKGAEEEDFVPFKFLRMDGTT------SIGVRQSLVDV 730
Query 685 FKASGDHNI-LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSK 737
F +N+ L+ T V G+++ N VI+Y+ N +Q R R G K
Sbjct 731 FNNDPSYNVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDVQARERAWRLGQK 784
>7bdk_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLS-IFTLMI 370
K +G V ++G ++ + II+ TP+ +KG + + + L+I
Sbjct 168 KRLATYGITVAELTGXXXXX---KEEISATQIIVCTPEKWDIITRKGXXXTYTQLVRLII 224
Query 371 FDECH 375
DE H
Sbjct 225 LDEIH 229
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>1fuk_A A EUKARYOTIC INITIATION FACTOR 4A
Length=165
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/59 (41%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query 675 LPAQK--CILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRG 731
LP Q+ I+ F+ SG ILI+T + GID+ Q +LVI Y+ N I GRG
Sbjct 64 LPQQERDTIMKEFR-SGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRG 121
>4kbg_A A Heat resistant RNA dependent ATPase
Length=365
Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/127 (28%), Positives = 58/127 (46%), Gaps = 7/127 (6%)
Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308
ALP A++GK+ I A TG GKT +L I E +G+K + + P E
Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVL---TPTRELALQ 87
Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367
V S+ + +V + G T E ++ D ++ TP ++ L++G + LS
Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146
Query 368 LMIFDEC 374
+ + DE
Sbjct 147 VAVLDEA 153
>7zuw_BC CA RQC trigger complex helicase SLH1
Length=1967
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 46/178 (26%), Positives = 78/178 (44%), Gaps = 32/178 (18%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERH 317
+N + +PTG GKT V+ L H K FP K+V+ A + ++ + K
Sbjct 1156 ENAFVGSPTGSGKTIVAELAIWHAFKTFP---GKKIVYIAPMKALVRERVDDWRK----- 1207
Query 318 GYRVTGISG-----ATAENVPVEQIVENNDIIILTPQ----ILVNNLKKGTIPSLSIFTL 368
++T ++G T +++P + V + I+I TP+ I N + + +S L
Sbjct 1208 --KITPVTGDKVVELTGDSLPDPKDVHDATIVITTPEKFDGISRNWQTRKFVQDVS---L 1262
Query 369 MIFDECH-NTSKQHP-YNMIM--FNYLDQ------KLGGSSGPLPQVIGLTASVGVGD 416
+I DE H S + P MI+ NY+ +L G S + + +GV D
Sbjct 1263 IIMDEIHLLASDRGPILEMIVSRMNYISSQTKQPVRLLGMSTAVSNAYDMAGWLGVKD 1320
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 27/192 (14%)
Query 240 PFKPRNYQLELALPAM--KGKNTIICAPTGCGKTFVSLLICEHHLKKFP----------Q 287
P++ N L P +N +ICAPTG GKT ++LL + +K+F Q
Sbjct 284 PYETLNQIQSLVYPVAYKTNENMLICAPTGAGKTDIALLTIINTIKQFXXXXXXXXIDIQ 343
Query 288 GQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISG---ATAENVPVEQIVENNDII 344
KV++ A + + FSK +V ++G T + Q +I
Sbjct 344 YDDFKVIYVAPLKALAAEIVDKFSKKLAPFNIQVRELTGDMQLTKAEILATQ------VI 397
Query 345 ILTPQI--LVNNLKKGTIPSLSIFTLMIFDECH--NTSKQHPYNMIMFNYLDQKLGGSSG 400
+ TP+ +V G +S L+I DE H + + ++ L Q SS
Sbjct 398 VTTPEKWDVVTRKANGDNDLVSKVKLLIIDEVHLLHEDRGSVIETLVARTLRQV--ESSQ 455
Query 401 PLPQVIGLTASV 412
+ ++IGL+A++
Sbjct 456 SMIRIIGLSATL 467
>7zrs_BC CA RQC trigger complex helicase SLH1
Length=1967
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 46/178 (26%), Positives = 78/178 (44%), Gaps = 32/178 (18%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERH 317
+N + +PTG GKT V+ L H K FP K+V+ A + ++ + K
Sbjct 1156 ENAFVGSPTGSGKTIVAELAIWHAFKTFP---GKKIVYIAPMKALVRERVDDWRK----- 1207
Query 318 GYRVTGISG-----ATAENVPVEQIVENNDIIILTPQ----ILVNNLKKGTIPSLSIFTL 368
++T ++G T +++P + V + I+I TP+ I N + + +S L
Sbjct 1208 --KITPVTGDKVVELTGDSLPDPKDVHDATIVITTPEKFDGISRNWQTRKFVQDVS---L 1262
Query 369 MIFDECH-NTSKQHP-YNMIM--FNYLDQ------KLGGSSGPLPQVIGLTASVGVGD 416
+I DE H S + P MI+ NY+ +L G S + + +GV D
Sbjct 1263 IIMDEIHLLASDRGPILEMIVSRMNYISSQTKQPVRLLGMSTAVSNAYDMAGWLGVKD 1320
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 27/192 (14%)
Query 240 PFKPRNYQLELALPAM--KGKNTIICAPTGCGKTFVSLLICEHHLKKFP----------Q 287
P++ N L P +N +ICAPTG GKT ++LL + +K+F Q
Sbjct 284 PYETLNQIQSLVYPVAYKTNENMLICAPTGAGKTDIALLTIINTIKQFXXXXXXXXIDIQ 343
Query 288 GQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISG---ATAENVPVEQIVENNDII 344
KV++ A + + FSK +V ++G T + Q +I
Sbjct 344 YDDFKVIYVAPLKALAAEIVDKFSKKLAPFNIQVRELTGDMQLTKAEILATQ------VI 397
Query 345 ILTPQI--LVNNLKKGTIPSLSIFTLMIFDECH--NTSKQHPYNMIMFNYLDQKLGGSSG 400
+ TP+ +V G +S L+I DE H + + ++ L Q SS
Sbjct 398 VTTPEKWDVVTRKANGDNDLVSKVKLLIIDEVHLLHEDRGSVIETLVARTLRQV--ESSQ 455
Query 401 PLPQVIGLTASV 412
+ ++IGL+A++
Sbjct 456 SMIRIIGLSATL 467
>7zpq_BC CA SLH1 isoform 1
Length=1967
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 46/178 (26%), Positives = 78/178 (44%), Gaps = 32/178 (18%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERH 317
+N + +PTG GKT V+ L H K FP K+V+ A + ++ + K
Sbjct 1156 ENAFVGSPTGSGKTIVAELAIWHAFKTFP---GKKIVYIAPMKALVRERVDDWRK----- 1207
Query 318 GYRVTGISG-----ATAENVPVEQIVENNDIIILTPQ----ILVNNLKKGTIPSLSIFTL 368
++T ++G T +++P + V + I+I TP+ I N + + +S L
Sbjct 1208 --KITPVTGDKVVELTGDSLPDPKDVHDATIVITTPEKFDGISRNWQTRKFVQDVS---L 1262
Query 369 MIFDECH-NTSKQHP-YNMIM--FNYLDQ------KLGGSSGPLPQVIGLTASVGVGD 416
+I DE H S + P MI+ NY+ +L G S + + +GV D
Sbjct 1263 IIMDEIHLLASDRGPILEMIVSRMNYISSQTKQPVRLLGMSTAVSNAYDMAGWLGVKD 1320
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 27/192 (14%)
Query 240 PFKPRNYQLELALPAM--KGKNTIICAPTGCGKTFVSLLICEHHLKKFP----------Q 287
P++ N L P +N +ICAPTG GKT ++LL + +K+F Q
Sbjct 284 PYETLNQIQSLVYPVAYKTNENMLICAPTGAGKTDIALLTIINTIKQFXXXXXXXXIDIQ 343
Query 288 GQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISG---ATAENVPVEQIVENNDII 344
KV++ A + + FSK +V ++G T + Q +I
Sbjct 344 YDDFKVIYVAPLKALAAEIVDKFSKKLAPFNIQVRELTGDMQLTKAEILATQ------VI 397
Query 345 ILTPQI--LVNNLKKGTIPSLSIFTLMIFDECH--NTSKQHPYNMIMFNYLDQKLGGSSG 400
+ TP+ +V G +S L+I DE H + + ++ L Q SS
Sbjct 398 VTTPEKWDVVTRKANGDNDLVSKVKLLIIDEVHLLHEDRGSVIETLVARTLRQV--ESSQ 455
Query 401 PLPQVIGLTASV 412
+ ++IGL+A++
Sbjct 456 SMIRIIGLSATL 467
>6p66_A A DNA repair protein RAD25
Length=471
Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/163 (28%), Positives = 70/163 (43%), Gaps = 29/163 (18%)
Query 568 KDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE 627
+DF V A+G+DE R E L+ E R N K+ L IL E H +
Sbjct 300 EDFNKIVMASGYDE-------RAYEALRAWEEARRIAFNSKNKIRKLREIL--ERHRKDK 350
Query 628 TITILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687
I +F + LV + FL P I T R + ++ IL+ F+
Sbjct 351 II--IFTRHNELVYRISK--------VFLIPAI-THRTSREE--------REEILEGFR- 390
Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
+G ++++ V DEGID+ N+ ++ G+ + IQ GR
Sbjct 391 TGRFRAIVSSQVLDEGIDVPDANVGVIMSGSGSAREYIQRLGR 433
>8vx9_B B HamB
Length=1174
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (47%), Gaps = 8/118 (7%)
Query 259 NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHG 318
+ ++ PT GKT ++ L L+ G++ VVF + Q ++ S+ F G
Sbjct 324 DLVVSLPTSAGKTRIAELCI---LRCLAGGKR--VVFITPLRALSAQTEATLSRTFGPLG 378
Query 319 YRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPS-LSIFTLMIFDECH 375
++ + G+ + E + DI++ TP+ L L+ PS ++ L IFDE H
Sbjct 379 KTISMLYGSIGVSGMDEDAIRQRDIVVATPEKLDFALRND--PSIINDVGLFIFDEGH 434
>5urk_A A U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1738
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 106 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 165
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ + II+ TP+ + K G + L+I
Sbjct 166 KRLATYGITVAELTGXXXXX---KEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 222
Query 371 FDECH 375
DE H
Sbjct 223 LDEIH 227
Score = 37.4 bits (85), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 954 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1008
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1009 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1062
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1063 DEVH------------------LIGGENGPVLEVI 1079
>6p66_C C DNA repair protein RAD25
Length=471
Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 45/163 (28%), Positives = 70/163 (43%), Gaps = 29/163 (18%)
Query 568 KDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE 627
+DF V A+G+DE R E L+ E R N K+ L IL E H +
Sbjct 300 EDFNKIVMASGYDE-------RAYEALRAWEEARRIAFNSKNKIRKLREIL--ERHRKDK 350
Query 628 TITILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687
I +F + LV + FL P I T R + ++ IL+ F+
Sbjct 351 II--IFTRHNELVYRISK--------VFLIPAI-THRTSREE--------REEILEGFR- 390
Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
+G ++++ V DEGID+ N+ ++ G+ + IQ GR
Sbjct 391 TGRFRAIVSSQVLDEGIDVPDANVGVIMSGSGSAREYIQRLGR 433
>2fwr_A A DNA repair protein RAD25
Length=472
Score = 38.5 bits (88), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (43%), Gaps = 29/163 (18%)
Query 568 KDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE 627
+DF V A+G+DE R E L+ E R N K+ L IL+ + +
Sbjct 301 EDFNKIVMASGYDE-------RAYEALRAWEEARRIAFNSKNKIRKLREILER----HRK 349
Query 628 TITILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687
I+F + LV + FL P I T R + ++ IL+ F+
Sbjct 350 DKIIIFTRHNELVYRISK--------VFLIPAI-THRTSREE--------REEILEGFR- 391
Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
+G ++++ V DEGID+ N+ ++ G+ + IQ GR
Sbjct 392 TGRFRAIVSSQVLDEGIDVPDANVGVIMSGSGSAREYIQRLGR 434
>8r0a_M B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 38.1 bits (87), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8h6j_M 5D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8h6e_M 5D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>6qx9_RB 5B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>6qw6_S 5B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8qxd_B B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8y6o_E E U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8r08_L B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>6ah0_B D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 38.1 bits (87), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8vxy_D B HamB
Length=1174
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (47%), Gaps = 8/118 (7%)
Query 259 NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHG 318
+ ++ PT GKT ++ L L+ G++ VVF + Q ++ S+ F G
Sbjct 324 DLVVSLPTSAGKTRIAELCI---LRCLAGGKR--VVFITPLRALSAQTEATLSRTFGPLG 378
Query 319 YRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPS-LSIFTLMIFDECH 375
++ + G+ + E + DI++ TP+ L L+ PS ++ L IFDE H
Sbjct 379 KTISMLYGSIGVSGMDEDAIRQRDIVVATPEKLDFALRND--PSIINDVGLFIFDEGH 434
>5yzg_D D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8vxc_B A HamB
Length=1174
Score = 38.5 bits (88), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (47%), Gaps = 8/118 (7%)
Query 259 NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHG 318
+ ++ PT GKT ++ L L+ G++ VVF + Q ++ S+ F G
Sbjct 324 DLVVSLPTSAGKTRIAELCI---LRCLAGGKR--VVFITPLRALSAQTEATLSRTFGPLG 378
Query 319 YRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPS-LSIFTLMIFDECH 375
++ + G+ + E + DI++ TP+ L L+ PS ++ L IFDE H
Sbjct 379 KTISMLYGSIGVSGMDEDAIRQRDIVVATPEKLDFALRND--PSIINDVGLFIFDEGH 434
>8vxa_C A HamB
Length=1174
Score = 38.5 bits (88), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (47%), Gaps = 8/118 (7%)
Query 259 NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHG 318
+ ++ PT GKT ++ L L+ G++ VVF + Q ++ S+ F G
Sbjct 324 DLVVSLPTSAGKTRIAELCI---LRCLAGGKR--VVFITPLRALSAQTEATLSRTFGPLG 378
Query 319 YRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPS-LSIFTLMIFDECH 375
++ + G+ + E + DI++ TP+ L L+ PS ++ L IFDE H
Sbjct 379 KTISMLYGSIGVSGMDEDAIRQRDIVVATPEKLDFALRND--PSIINDVGLFIFDEGH 434
>3jcr_C C hBrr2
Length=2136
Score = 38.5 bits (88), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>1gm5_A A RECG
Length=780
Score = 38.5 bits (88), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 45/74 (61%), Gaps = 5/74 (7%)
Query 687 ASGDHNILIATSVADEGIDIAQCNLVILY--EYVGNVIKMIQTRGR-GR-ARGSKCFLLT 742
A G ++IL++T+V + GID+ + N++++ E G + ++ Q RGR GR + + CFL+
Sbjct 636 AEGRYDILVSTTVIEVGIDVPRANVMVIENPERFG-LAQLHQLRGRVGRGGQEAYCFLVV 694
Query 743 SNAGVIEKEQINMY 756
+ G E++ +
Sbjct 695 GDVGEEAMERLRFF 708
>7a5p_NA q U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>7bdj_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747
Score = 38.5 bits (88), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ + + II+ TP+ + K G + L+I
Sbjct 168 KRLATYGITVAELTG---DHQXXXEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224
Query 371 FDECH 375
DE H
Sbjct 225 LDEIH 229
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>7dvq_D D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>5urm_B B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1738
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 106 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 165
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 166 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 222
Query 371 FDECH 375
DE H
Sbjct 223 LDEIH 227
Score = 37.7 bits (86), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 954 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1008
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1009 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1062
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1063 DEVH------------------LIGGENGPVLEVI 1079
>4f93_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1724
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 96 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 155
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 156 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 212
Query 371 FDECH 375
DE H
Sbjct 213 LDEIH 217
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 944 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 998
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 999 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1052
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1053 DEVH------------------LIGGENGPVLEVI 1069
>4f92_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1724
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 96 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 155
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 156 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 212
Query 371 FDECH 375
DE H
Sbjct 213 LDEIH 217
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 944 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 998
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 999 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1052
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1053 DEVH------------------LIGGENGPVLEVI 1069
>6s8q_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224
Query 371 FDECH 375
DE H
Sbjct 225 LDEIH 229
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>8bcc_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224
Query 371 FDECH 375
DE H
Sbjct 225 LDEIH 229
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>8bcg_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224
Query 371 FDECH 375
DE H
Sbjct 225 LDEIH 229
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>7bdl_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224
Query 371 FDECH 375
DE H
Sbjct 225 LDEIH 229
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>7bdi_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224
Query 371 FDECH 375
DE H
Sbjct 225 LDEIH 229
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>7px3_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224
Query 371 FDECH 375
DE H
Sbjct 225 LDEIH 229
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>6s8o_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224
Query 371 FDECH 375
DE H
Sbjct 225 LDEIH 229
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>7os2_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1739
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 107 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 166
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 167 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 223
Query 371 FDECH 375
DE H
Sbjct 224 LDEIH 228
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 955 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1009
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1010 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1063
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1064 DEVH------------------LIGGENGPVLEVI 1080
>4f91_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1724
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 96 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 155
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 156 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 212
Query 371 FDECH 375
DE H
Sbjct 213 LDEIH 217
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 944 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 998
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 999 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1052
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1053 DEVH------------------LIGGENGPVLEVI 1069
>8bch_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224
Query 371 FDECH 375
DE H
Sbjct 225 LDEIH 229
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>8q7x_C B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.4 bits (85), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8c6j_I B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8rc0_G B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.4 bits (85), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8bcb_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224
Query 371 FDECH 375
DE H
Sbjct 225 LDEIH 229
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>8bce_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224
Query 371 FDECH 375
DE H
Sbjct 225 LDEIH 229
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>8bc8_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224
Query 371 FDECH 375
DE H
Sbjct 225 LDEIH 229
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>8bc9_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224
Query 371 FDECH 375
DE H
Sbjct 225 LDEIH 229
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>6qdv_H B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1722
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 94 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 153
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 154 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 210
Query 371 FDECH 375
DE H
Sbjct 211 LDEIH 215
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 942 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 996
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 997 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1050
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1051 DEVH------------------LIGGENGPVLEVI 1067
>5urm_A A U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1738
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 106 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 165
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 166 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 222
Query 371 FDECH 375
DE H
Sbjct 223 LDEIH 227
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 954 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1008
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1009 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1062
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1063 DEVH------------------LIGGENGPVLEVI 1079
>4kit_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1739
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 107 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 166
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 167 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 223
Query 371 FDECH 375
DE H
Sbjct 224 LDEIH 228
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 955 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1009
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1010 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1063
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1064 DEVH------------------LIGGENGPVLEVI 1080
>8bcd_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224
Query 371 FDECH 375
DE H
Sbjct 225 LDEIH 229
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>8bcf_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224
Query 371 FDECH 375
DE H
Sbjct 225 LDEIH 229
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>8bca_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224
Query 371 FDECH 375
DE H
Sbjct 225 LDEIH 229
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>5o9z_C C U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8qo9_JA B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8qzs_B B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>6icz_YA D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>6ahd_KB D Brr2, U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>7abi_M s U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>7abg_H s U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8h6k_E 5D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>5z58_D D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>5z57_D D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>5z56_D D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8ch6_JA c U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>7w5b_D D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>5xjc_D D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>6ff7_GB r U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8h6l_E 5D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>7os1_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1739
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 107 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 166
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 167 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 223
Query 371 FDECH 375
DE H
Sbjct 224 LDEIH 228
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 955 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1009
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1010 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1063
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1064 DEVH------------------LIGGENGPVLEVI 1080
>6s9i_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVCDFKIIYIAPMRSLVQEMVGSFG 167
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224
Query 371 FDECH 375
DE H
Sbjct 225 LDEIH 229
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>8r0b_B B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.4 bits (85), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8r09_JA B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.4 bits (85), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8rm5_JA B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G ++ ++ + II+ TP+ + K G + L+I
Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613
Query 371 FDECH 375
DE H
Sbjct 614 LDEIH 618
Score = 37.4 bits (85), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>1fuu_B B YEAST INITIATION FACTOR 4A
Length=438
Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/59 (41%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query 675 LPAQK--CILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRG 731
LP Q+ I+ F+ SG ILI+T + GID+ Q +LVI Y+ N I GRG
Sbjct 293 LPQQERDTIMKEFR-SGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRG 350
>5urj_A A U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1738
Score = 37.7 bits (86), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 51/125 (41%), Gaps = 10/125 (8%)
Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311
+N ++CAPTG GKT V+L+ + K K+++ A + ++ F
Sbjct 106 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 165
Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370
K +G V ++G + II+ TP+ + K G + L+I
Sbjct 166 KRLATYGITVAELTGXXXXX---XXEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 222
Query 371 FDECH 375
DE H
Sbjct 223 LDEIH 227
Score = 37.4 bits (85), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315
N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ +
Sbjct 954 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1008
Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371
R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F +
Sbjct 1009 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1062
Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406
DE H +GG +GP+ +VI
Sbjct 1063 DEVH------------------LIGGENGPVLEVI 1079
>7ase_A f kDDX60
Length=2174
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 36/140 (26%), Positives = 60/140 (43%), Gaps = 9/140 (6%)
Query 241 FKPRNYQLELALPAMKGKNT-IICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299
F P N+Q EL L + G+ + ++CAPT GKTF+S C + K + K VV+ A
Sbjct 1023 FNPDNWQREL-LDIVDGRGSAVVCAPTSAGKTFIS-YYCMY--KALRRTNKKVVVYLAPA 1078
Query 300 IPVYEQQKSVFSKYFERHGYRVTG--ISGATAENVPVEQIVENNDIIILTPQILVNNLKK 357
+ Q + + Y+ G I GA Q ++ +++ P+ L
Sbjct 1079 RALINQAVADVCARYGSKKYKNPGRYIYGALG-GADYHQFHDSCQVLLTVPETFETMLLS 1137
Query 358 GTIPS-LSIFTLMIFDECHN 376
+ + +I DE H+
Sbjct 1138 PKYTDWVELIDYVILDEIHS 1157
>7ask_A F kDDX60
Length=2174
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 36/140 (26%), Positives = 60/140 (43%), Gaps = 9/140 (6%)
Query 241 FKPRNYQLELALPAMKGKNT-IICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299
F P N+Q EL L + G+ + ++CAPT GKTF+S C + K + K VV+ A
Sbjct 1023 FNPDNWQREL-LDIVDGRGSAVVCAPTSAGKTFIS-YYCMY--KALRRTNKKVVVYLAPA 1078
Query 300 IPVYEQQKSVFSKYFERHGYRVTG--ISGATAENVPVEQIVENNDIIILTPQILVNNLKK 357
+ Q + + Y+ G I GA Q ++ +++ P+ L
Sbjct 1079 RALINQAVADVCARYGSKKYKNPGRYIYGALG-GADYHQFHDSCQVLLTVPETFETMLLS 1137
Query 358 GTIPS-LSIFTLMIFDECHN 376
+ + +I DE H+
Sbjct 1138 PKYTDWVELIDYVILDEIHS 1157
>4d25_A A BMVLG PROTEIN
Length=434
Score = 37.4 bits (85), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/59 (39%), Positives = 33/59 (56%), Gaps = 8/59 (14%)
Query 682 LDAFKASGDHNILIATSVADEGIDIAQCNLVILY-------EYVGNVIKMIQTRGRGRA 733
L FK SG H IL+AT+VA G+DI ++V+ Y EYV + + + RG+A
Sbjct 344 LQNFK-SGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKA 401
>4d26_A A BMVLG PROTEIN
Length=434
Score = 37.4 bits (85), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/59 (39%), Positives = 33/59 (56%), Gaps = 8/59 (14%)
Query 682 LDAFKASGDHNILIATSVADEGIDIAQCNLVILY-------EYVGNVIKMIQTRGRGRA 733
L FK SG H IL+AT+VA G+DI ++V+ Y EYV + + + RG+A
Sbjct 344 LQNFK-SGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKA 401
>4ovy_A A Haloacid dehalogenase domain protein hydrolase
Length=342
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/96 (24%), Positives = 47/96 (49%), Gaps = 7/96 (7%)
Query 388 FNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLE 447
N++D + G G + QVIG + VG++ E L+Y+ S A+ + + H+ +
Sbjct 207 LNFIDDQAGKPVG-IRQVIGRRPVMAVGNSDGDYEMLEYVT----SGPANGLGLIVHHTD 261
Query 448 ELEQVVYKPQKFFRKVESRISDKFK--YIIAQLMRD 481
+ + Y Q F +++ ++D +I+ + RD
Sbjct 262 AVREFAYDRQSPFGRLDRALTDATSKGWIVIDMQRD 297
>2fzl_A A DNA repair protein RAD25, XPB
Length=219
Score = 35.8 bits (81), Expect = 1.4, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 70/163 (43%), Gaps = 29/163 (18%)
Query 568 KDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE 627
+DF V A+G+DE R E L+ E R N K+ L IL+ + +
Sbjct 66 EDFNKIVMASGYDE-------RAYEALRAWEEARRIAFNSKNKIRKLREILER----HRK 114
Query 628 TITILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687
I+F + LV + FL P I T R + ++ IL+ F+
Sbjct 115 DKIIIFTRHNELVYRISK--------VFLIPAI-THRTSREE--------REEILEGFR- 156
Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
+G ++++ V DEGID+ N+ ++ G+ + IQ GR
Sbjct 157 TGRFRAIVSSQVLDEGIDVPDANVGVIMSGSGSAREYIQRLGR 199
>7dni_E A Interferon-induced helicase C domain-containing protein
1
Length=208
Score = 34.7 bits (78), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (43%), Gaps = 12/170 (7%)
Query 6 RRSLQAFQDYIRKTLDPTYILSYMAPWFREEEV-QYIQAEKNNKGPMEAATLFLKFLLE- 63
R + F+ ++ + +L Y+ F EV + IQ G M+A L L L +
Sbjct 12 RYLISCFRARVKMYIQVEPVLDYLT--FLPAEVKEQIQRTVATSGNMQAVELLLSTLEKG 69
Query 64 LQEEGWFRGFLDALDHAG--YSGLYEAIESWDFKKIE---KLEEYRLLLKRLQPEFKTRI 118
+ GW R F++AL G + Y E D +EY LL LQP ++
Sbjct 70 VWHLGWTREFVEALRRTGSPLAARYMNPELTDLPSPSFENAHDEYLQLLNLLQPTLVDKL 129
Query 119 IPTDIISD-LSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENW 167
+ D++ + E L+ E + G +G +L++ +++ KENW
Sbjct 130 LVRDVLDKCMEEELLTIEDRNRIAAAENNGNESGVRELLKRIVQ--KENW 177
>3jcr_F F hPrp28
Length=820
Score = 35.4 bits (80), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 88/228 (39%), Gaps = 31/228 (14%)
Query 524 QMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIE 583
Q PD DE K L + S KY ++ + A M A++ L + A +
Sbjct 575 QKPDTDEAEDPEKMLANFESGKHKYRQTVMFT--ATMPPAVERLARSYLRRPAVVYIGXX 632
Query 584 QDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDAL 643
+R E+K+ + +E+ K + L IL++ + + I+FV + D L
Sbjct 633 XXXXERVEQKVFLM--------SESEKRKKLLAILEQGF----DPPIIIFVNQKKGCDVL 680
Query 644 KNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEG 703
+E G ++ L KA G +IL+AT V
Sbjct 681 AKSLEK------------MGYNACTLXXXXXXXXREFALSNLKA-GAKDILVATDVXXXX 727
Query 704 IDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKC---FLLTSNAGV 747
IDI ++V+ Y+ N+ I GR GRA S FL ++ V
Sbjct 728 IDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAV 775
>7dni_F B Interferon-induced helicase C domain-containing protein
1
Length=208
Score = 34.7 bits (78), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (43%), Gaps = 12/170 (7%)
Query 6 RRSLQAFQDYIRKTLDPTYILSYMAPWFREEEV-QYIQAEKNNKGPMEAATLFLKFLLE- 63
R + F+ ++ + +L Y+ F EV + IQ G M+A L L L +
Sbjct 12 RYLISCFRARVKMYIQVEPVLDYLT--FLPAEVKEQIQRTVATSGNMQAVELLLSTLEKG 69
Query 64 LQEEGWFRGFLDALDHAG--YSGLYEAIESWDFKKIE---KLEEYRLLLKRLQPEFKTRI 118
+ GW R F++AL G + Y E D +EY LL LQP ++
Sbjct 70 VWHLGWTREFVEALRRTGSPLAARYMNPELTDLPSPSFENAHDEYLQLLNLLQPTLVDKL 129
Query 119 IPTDIISD-LSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENW 167
+ D++ + E L+ E + G +G +L++ +++ KENW
Sbjct 130 LVRDVLDKCMEEELLTIEDRNRIAAAENNGNESGVRELLKRIVQ--KENW 177
>2va8_B B SKI2-TYPE HELICASE
Length=715
Score = 35.4 bits (80), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query 255 MKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYF 314
++G ++ +PTG GKT LI E + F GK + + + +K + K +
Sbjct 44 LEGNRLLLTSPTGSGKT----LIAEMGIISFLLKNGGKAI-YVTPLRALTNEKYLTFKDW 98
Query 315 ERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDEC 374
E G++V SG + + ++N DIII T + L ++L + L+ + DE
Sbjct 99 ELIGFKVAMTSGDYDTD---DAWLKNYDIIITTYEKL-DSLWRHRPEWLNEVNYFVLDEL 154
Query 375 H 375
H
Sbjct 155 H 155
>3nej_A A Heat resistant RNA dependent ATPase
Length=207
Score = 34.7 bits (78), Expect = 3.4, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308
ALP A++GK+ I A TG GKT +L I E +G+K + + Q S
Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLTPXXXXXXQVAS 90
Query 309 VFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFTL 368
+ +V + G T E ++ D ++ TP ++ L++G + LS +
Sbjct 91 ELTAVAPH--LKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVEV 147
Query 369 MIFDE 373
+ DE
Sbjct 148 AVLDE 152
>5gju_A A ATP-dependent RNA helicase DeaD
Length=205
Score = 34.7 bits (78), Expect = 3.4, Method: Composition-based stats.
Identities = 33/134 (25%), Positives = 60/134 (45%), Gaps = 6/134 (4%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301
KP Q E + G++ + A TG GKT L +L P+ + +++ A
Sbjct 23 KPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLD--PELKAPQILVLAPTRE 80
Query 302 VYEQQKSVFSKYFERH--GYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359
+ Q + F +H G V + V + + + I++ TP L+++LK+GT
Sbjct 81 LAVQVAEAMTD-FSKHMRGVNVVALYXXXXXXVQLRALRQGPQIVVGTPGRLLDHLKRGT 139
Query 360 IPSLSIFTLMIFDE 373
+ LS + ++ DE
Sbjct 140 L-DLSKLSGLVLDE 152
>2va8_A A SKI2-TYPE HELICASE
Length=715
Score = 35.4 bits (80), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query 255 MKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYF 314
++G ++ +PTG GKT LI E + F GK + + + +K + K +
Sbjct 44 LEGNRLLLTSPTGSGKT----LIAEMGIISFLLKNGGKAI-YVTPLRALTNEKYLTFKDW 98
Query 315 ERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDEC 374
E G++V SG + + ++N DIII T + L ++L + L+ + DE
Sbjct 99 ELIGFKVAMTSGDYDTD---DAWLKNYDIIITTYEKL-DSLWRHRPEWLNEVNYFVLDEL 154
Query 375 H 375
H
Sbjct 155 H 155
>2vsx_B B ATP-DEPENDENT RNA HELICASE EIF4A
Length=395
Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/58 (40%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query 675 LPAQK--CILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
LP Q+ I+ F+ SG ILI+T + GID+ Q +LVI Y+ N I GR
Sbjct 294 LPQQERDTIMKEFR-SGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGR 350
>2vso_B B ATP-DEPENDENT RNA HELICASE EIF4A
Length=395
Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/58 (40%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query 675 LPAQK--CILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
LP Q+ I+ F+ SG ILI+T + GID+ Q +LVI Y+ N I GR
Sbjct 294 LPQQERDTIMKEFR-SGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGR 350
>2vsx_A A ATP-DEPENDENT RNA HELICASE EIF4A
Length=395
Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/58 (40%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query 675 LPAQK--CILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
LP Q+ I+ F+ SG ILI+T + GID+ Q +LVI Y+ N I GR
Sbjct 294 LPQQERDTIMKEFR-SGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGR 350
>2vso_A A ATP-DEPENDENT RNA HELICASE EIF4A
Length=395
Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/58 (40%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query 675 LPAQK--CILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
LP Q+ I+ F+ SG ILI+T + GID+ Q +LVI Y+ N I GR
Sbjct 294 LPQQERDTIMKEFR-SGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGR 350
>2gxs_A A heat resistant RNA dependent ATPase
Length=207
Score = 34.3 bits (77), Expect = 3.7, Method: Composition-based stats.
Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%)
Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308
ALP A++GK+ I A TG GKT +L I E +G+K + + P E
Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87
Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367
V S+ + +V + G T E ++ D ++ TP ++ L++G + LS
Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146
Query 368 LMIFDE 373
+ + DE
Sbjct 147 VAVLDE 152
>2gxu_A A heat resistant RNA dependent ATPase
Length=207
Score = 34.3 bits (77), Expect = 3.7, Method: Composition-based stats.
Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%)
Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308
ALP A++GK+ I A TG GKT +L I E +G+K + + P E
Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87
Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367
V S+ + +V + G T E ++ D ++ TP ++ L++G + LS
Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146
Query 368 LMIFDE 373
+ + DE
Sbjct 147 VAVLDE 152
>2gxs_B B heat resistant RNA dependent ATPase
Length=207
Score = 34.3 bits (77), Expect = 3.7, Method: Composition-based stats.
Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%)
Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308
ALP A++GK+ I A TG GKT +L I E +G+K + + P E
Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87
Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367
V S+ + +V + G T E ++ D ++ TP ++ L++G + LS
Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146
Query 368 LMIFDE 373
+ + DE
Sbjct 147 VAVLDE 152
>2gxq_A A heat resistant RNA dependent ATPase
Length=207
Score = 34.3 bits (77), Expect = 3.7, Method: Composition-based stats.
Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%)
Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308
ALP A++GK+ I A TG GKT +L I E +G+K + + P E
Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87
Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367
V S+ + +V + G T E ++ D ++ TP ++ L++G + LS
Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146
Query 368 LMIFDE 373
+ + DE
Sbjct 147 VAVLDE 152
>7dnj_D D Interferon-induced helicase C domain-containing protein
1
Length=208
Score = 34.3 bits (77), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (43%), Gaps = 12/170 (7%)
Query 6 RRSLQAFQDYIRKTLDPTYILSYMAPWFREEEV-QYIQAEKNNKGPMEAATLFLKFLLE- 63
R + F+ ++ + +L Y+ F EV + IQ G M+A L L L +
Sbjct 12 RYLISCFRARVKMYIQVEPVLDYLT--FLPAEVKEQIQRTVATSGNMQAVELLLSTLEKG 69
Query 64 LQEEGWFRGFLDALDHAG--YSGLYEAIESWDFKKIE---KLEEYRLLLKRLQPEFKTRI 118
+ GW R F++AL G + Y E D +EY LL LQP ++
Sbjct 70 VWHLGWTREFVEALRRTGSPLAARYMNPELTDLPSPSFENAHDEYLQLLNLLQPTLVDKL 129
Query 119 IPTDIISD-LSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENW 167
+ D++ + E L+ E + G +G +L++ +++ KENW
Sbjct 130 LVRDVLDKCMEEELLTIEDRNRIAAAENNGNESGVRELLKRIVQ--KENW 177
>7dnj_C C Interferon-induced helicase C domain-containing protein
1
Length=208
Score = 34.3 bits (77), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (43%), Gaps = 12/170 (7%)
Query 6 RRSLQAFQDYIRKTLDPTYILSYMAPWFREEEV-QYIQAEKNNKGPMEAATLFLKFLLE- 63
R + F+ ++ + +L Y+ F EV + IQ G M+A L L L +
Sbjct 12 RYLISCFRARVKMYIQVEPVLDYLT--FLPAEVKEQIQRTVATSGNMQAVELLLSTLEKG 69
Query 64 LQEEGWFRGFLDALDHAG--YSGLYEAIESWDFKKIE---KLEEYRLLLKRLQPEFKTRI 118
+ GW R F++AL G + Y E D +EY LL LQP ++
Sbjct 70 VWHLGWTREFVEALRRTGSPLAARYMNPELTDLPSPSFENAHDEYLQLLNLLQPTLVDKL 129
Query 119 IPTDIISD-LSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENW 167
+ D++ + E L+ E + G +G +L++ +++ KENW
Sbjct 130 LVRDVLDKCMEEELLTIEDRNRIAAAENNGNESGVRELLKRIVQ--KENW 177
>7dnj_B B Interferon-induced helicase C domain-containing protein
1
Length=208
Score = 34.3 bits (77), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (43%), Gaps = 12/170 (7%)
Query 6 RRSLQAFQDYIRKTLDPTYILSYMAPWFREEEV-QYIQAEKNNKGPMEAATLFLKFLLE- 63
R + F+ ++ + +L Y+ F EV + IQ G M+A L L L +
Sbjct 12 RYLISCFRARVKMYIQVEPVLDYLT--FLPAEVKEQIQRTVATSGNMQAVELLLSTLEKG 69
Query 64 LQEEGWFRGFLDALDHAG--YSGLYEAIESWDFKKIE---KLEEYRLLLKRLQPEFKTRI 118
+ GW R F++AL G + Y E D +EY LL LQP ++
Sbjct 70 VWHLGWTREFVEALRRTGSPLAARYMNPELTDLPSPSFENAHDEYLQLLNLLQPTLVDKL 129
Query 119 IPTDIISD-LSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENW 167
+ D++ + E L+ E + G +G +L++ +++ KENW
Sbjct 130 LVRDVLDKCMEEELLTIEDRNRIAAAENNGNESGVRELLKRIVQ--KENW 177
>7dnj_A A Interferon-induced helicase C domain-containing protein
1
Length=208
Score = 34.3 bits (77), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (43%), Gaps = 12/170 (7%)
Query 6 RRSLQAFQDYIRKTLDPTYILSYMAPWFREEEV-QYIQAEKNNKGPMEAATLFLKFLLE- 63
R + F+ ++ + +L Y+ F EV + IQ G M+A L L L +
Sbjct 12 RYLISCFRARVKMYIQVEPVLDYLT--FLPAEVKEQIQRTVATSGNMQAVELLLSTLEKG 69
Query 64 LQEEGWFRGFLDALDHAG--YSGLYEAIESWDFKKIE---KLEEYRLLLKRLQPEFKTRI 118
+ GW R F++AL G + Y E D +EY LL LQP ++
Sbjct 70 VWHLGWTREFVEALRRTGSPLAARYMNPELTDLPSPSFENAHDEYLQLLNLLQPTLVDKL 129
Query 119 IPTDIISD-LSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENW 167
+ D++ + E L+ E + G +G +L++ +++ KENW
Sbjct 130 LVRDVLDKCMEEELLTIEDRNRIAAAENNGNESGVRELLKRIVQ--KENW 177
>7dni_H D Interferon-induced helicase C domain-containing protein
1
Length=208
Score = 34.3 bits (77), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (43%), Gaps = 12/170 (7%)
Query 6 RRSLQAFQDYIRKTLDPTYILSYMAPWFREEEV-QYIQAEKNNKGPMEAATLFLKFLLE- 63
R + F+ ++ + +L Y+ F EV + IQ G M+A L L L +
Sbjct 12 RYLISCFRARVKMYIQVEPVLDYLT--FLPAEVKEQIQRTVATSGNMQAVELLLSTLEKG 69
Query 64 LQEEGWFRGFLDALDHAG--YSGLYEAIESWDFKKIE---KLEEYRLLLKRLQPEFKTRI 118
+ GW R F++AL G + Y E D +EY LL LQP ++
Sbjct 70 VWHLGWTREFVEALRRTGSPLAARYMNPELTDLPSPSFENAHDEYLQLLNLLQPTLVDKL 129
Query 119 IPTDIISD-LSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENW 167
+ D++ + E L+ E + G +G +L++ +++ KENW
Sbjct 130 LVRDVLDKCMEEELLTIEDRNRIAAAENNGNESGVRELLKRIVQ--KENW 177
>7dni_G C Interferon-induced helicase C domain-containing protein
1
Length=208
Score = 34.3 bits (77), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (43%), Gaps = 12/170 (7%)
Query 6 RRSLQAFQDYIRKTLDPTYILSYMAPWFREEEV-QYIQAEKNNKGPMEAATLFLKFLLE- 63
R + F+ ++ + +L Y+ F EV + IQ G M+A L L L +
Sbjct 12 RYLISCFRARVKMYIQVEPVLDYLT--FLPAEVKEQIQRTVATSGNMQAVELLLSTLEKG 69
Query 64 LQEEGWFRGFLDALDHAG--YSGLYEAIESWDFKKIE---KLEEYRLLLKRLQPEFKTRI 118
+ GW R F++AL G + Y E D +EY LL LQP ++
Sbjct 70 VWHLGWTREFVEALRRTGSPLAARYMNPELTDLPSPSFENAHDEYLQLLNLLQPTLVDKL 129
Query 119 IPTDIISD-LSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENW 167
+ D++ + E L+ E + G +G +L++ +++ KENW
Sbjct 130 LVRDVLDKCMEEELLTIEDRNRIAAAENNGNESGVRELLKRIVQ--KENW 177
>3nbf_B B Heat resistant RNA dependent ATPase
Length=207
Score = 34.3 bits (77), Expect = 4.0, Method: Composition-based stats.
Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%)
Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308
ALP A++GK+ I A TG GKT +L I E +G+K + + P E
Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87
Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367
V S+ + +V + G T E ++ D ++ TP ++ L++G + LS
Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146
Query 368 LMIFDE 373
+ + DE
Sbjct 147 VAVLDE 152
>3nbf_C C Heat resistant RNA dependent ATPase
Length=207
Score = 34.3 bits (77), Expect = 4.0, Method: Composition-based stats.
Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%)
Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308
ALP A++GK+ I A TG GKT +L I E +G+K + + P E
Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87
Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367
V S+ + +V + G T E ++ D ++ TP ++ L++G + LS
Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146
Query 368 LMIFDE 373
+ + DE
Sbjct 147 VAVLDE 152
>3mwj_A A Heat resistant RNA dependent ATPase
Length=207
Score = 34.3 bits (77), Expect = 4.0, Method: Composition-based stats.
Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%)
Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308
ALP A++GK+ I A TG GKT +L I E +G+K + + P E
Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87
Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367
V S+ + +V + G T E ++ D ++ TP ++ L++G + LS
Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146
Query 368 LMIFDE 373
+ + DE
Sbjct 147 VAVLDE 152
>3nbf_A A Heat resistant RNA dependent ATPase
Length=207
Score = 34.3 bits (77), Expect = 4.0, Method: Composition-based stats.
Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%)
Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308
ALP A++GK+ I A TG GKT +L I E +G+K + + P E
Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87
Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367
V S+ + +V + G T E ++ D ++ TP ++ L++G + LS
Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146
Query 368 LMIFDE 373
+ + DE
Sbjct 147 VAVLDE 152
>3mwk_B B Heat resistant RNA dependent ATPase
Length=207
Score = 34.3 bits (77), Expect = 4.0, Method: Composition-based stats.
Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%)
Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308
ALP A++GK+ I A TG GKT +L I E +G+K + + P E
Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87
Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367
V S+ + +V + G T E ++ D ++ TP ++ L++G + LS
Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146
Query 368 LMIFDE 373
+ + DE
Sbjct 147 VAVLDE 152
>3mwl_A A Heat resistant RNA dependent ATPase
Length=207
Score = 34.3 bits (77), Expect = 4.0, Method: Composition-based stats.
Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%)
Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308
ALP A++GK+ I A TG GKT +L I E +G+K + + P E
Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87
Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367
V S+ + +V + G T E ++ D ++ TP ++ L++G + LS
Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146
Query 368 LMIFDE 373
+ + DE
Sbjct 147 VAVLDE 152
>3mwk_A A Heat resistant RNA dependent ATPase
Length=207
Score = 34.3 bits (77), Expect = 4.0, Method: Composition-based stats.
Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%)
Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308
ALP A++GK+ I A TG GKT +L I E +G+K + + P E
Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87
Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367
V S+ + +V + G T E ++ D ++ TP ++ L++G + LS
Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146
Query 368 LMIFDE 373
+ + DE
Sbjct 147 VAVLDE 152
>3mwj_B B Heat resistant RNA dependent ATPase
Length=207
Score = 34.3 bits (77), Expect = 4.0, Method: Composition-based stats.
Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%)
Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308
ALP A++GK+ I A TG GKT +L I E +G+K + + P E
Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87
Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367
V S+ + +V + G T E ++ D ++ TP ++ L++G + LS
Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146
Query 368 LMIFDE 373
+ + DE
Sbjct 147 VAVLDE 152
>3mwl_B B Heat resistant RNA dependent ATPase
Length=207
Score = 34.3 bits (77), Expect = 4.0, Method: Composition-based stats.
Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%)
Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308
ALP A++GK+ I A TG GKT +L I E +G+K + + P E
Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87
Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367
V S+ + +V + G T E ++ D ++ TP ++ L++G + LS
Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146
Query 368 LMIFDE 373
+ + DE
Sbjct 147 VAVLDE 152
>8r08_GA G Probable ATP-dependent RNA helicase DDX23
Length=820
Score = 35.0 bits (79), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 88/228 (39%), Gaps = 31/228 (14%)
Query 524 QMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIE 583
Q PD DE K L + S KY ++ + A M A++ L + A +
Sbjct 575 QKPDTDEAEXPEKMLANFESGKHKYRQTVMFT--ATMPPAVERLARSYLRRPAVVYIXXX 632
Query 584 QDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDAL 643
+R E+K+ + +E+ K + L IL++ + + I+FV + D L
Sbjct 633 GKPHERVEQKVFLM--------SESEKRKKLLAILEQGF----DPPIIIFVNQKKGCDVL 680
Query 644 KNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEG 703
+E G ++ L KA G +IL+AT V
Sbjct 681 AKSLEK------------MGYNACTLXXXXXXXXREFALSNLKA-GAKDILVATDVXXXX 727
Query 704 IDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKC---FLLTSNAGV 747
IDI ++V+ Y+ N+ I GR GRA S FL ++ V
Sbjct 728 IDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAV 775
>5tnu_A A DNA-dependent ATPase XPBII
Length=459
Score = 35.0 bits (79), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
IL F+ G++ +++A++V DEG+D+ L I+ G + +Q GR
Sbjct 381 ILQKFR-DGEYRVIVASTVFDEGVDVPDATLAIVMGGYGTKRQFLQRLGR 429
Score = 35.0 bits (79), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 24/158 (15%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVY 303
R+YQ E +K K II PTG GKT V+L I K + I +
Sbjct 90 RDYQAEAVKAWLKEKRGIIVLPTGAGKTQVALKIVSI--------MKVATLIVVPTIDLI 141
Query 304 EQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSL 363
Q K +KY + GI G +++ ++ D + L N
Sbjct 142 TQWKERINKYLDFD----PGIIGGGEDSLKGITVI-TYDSAYTRAEELGNK--------- 187
Query 364 SIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGP 401
F L+IFDE H+ + M +LG ++ P
Sbjct 188 --FPLLIFDEVHHLPSEGYSIMAQLFASPYRLGLTATP 223
>6p4o_C C DNA-dependent ATPase XPBII
Length=459
Score = 35.0 bits (79), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
IL F+ G++ +++A++V DEG+D+ L I+ G + +Q GR
Sbjct 381 ILQKFR-DGEYRVIVASTVFDEGVDVPDATLAIVMGGYGTKRQFLQRLGR 429
Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 24/158 (15%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVY 303
R+YQ E +K K II PTG GKT V+L I K + I +
Sbjct 90 RDYQAEAVKAWLKEKRGIIVLPTGAGKTQVALKIVSI--------MKVATLIVVPTIDLI 141
Query 304 EQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSL 363
Q K +KY + GI G +++ ++ D + L N
Sbjct 142 TQWKERINKYLDFD----PGIIGGGEDSLKGITVI-TYDSAYTRAEELGNK--------- 187
Query 364 SIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGP 401
F L+IFDE H+ + M +LG ++ P
Sbjct 188 --FPLLIFDEVHHLPSEGYSIMAQLFASPYRLGLTATP 223
>6p4o_A A DNA-dependent ATPase XPBII
Length=459
Score = 35.0 bits (79), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
IL F+ G++ +++A++V DEG+D+ L I+ G + +Q GR
Sbjct 381 ILQKFR-DGEYRVIVASTVFDEGVDVPDATLAIVMGGYGTKRQFLQRLGR 429
Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 24/158 (15%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVY 303
R+YQ E +K K II PTG GKT V+L I K + I +
Sbjct 90 RDYQAEAVKAWLKEKRGIIVLPTGAGKTQVALKIVSI--------MKVATLIVVPTIDLI 141
Query 304 EQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSL 363
Q K +KY + GI G +++ ++ D + L N
Sbjct 142 TQWKERINKYLDFD----PGIIGGGEDSLKGITVI-TYDSAYTRAEELGNK--------- 187
Query 364 SIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGP 401
F L+IFDE H+ + M +LG ++ P
Sbjct 188 --FPLLIFDEVHHLPSEGYSIMAQLFASPYRLGLTATP 223
>6p4o_E E DNA-dependent ATPase XPBII
Length=459
Score = 35.0 bits (79), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
IL F+ G++ +++A++V DEG+D+ L I+ G + +Q GR
Sbjct 381 ILQKFR-DGEYRVIVASTVFDEGVDVPDATLAIVMGGYGTKRQFLQRLGR 429
Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 24/158 (15%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVY 303
R+YQ E +K K II PTG GKT V+L I K + I +
Sbjct 90 RDYQAEAVKAWLKEKRGIIVLPTGAGKTQVALKIVSI--------MKVATLIVVPTIDLI 141
Query 304 EQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSL 363
Q K +KY + GI G +++ ++ D + L N
Sbjct 142 TQWKERINKYLDFD----PGIIGGGEDSLKGITVI-TYDSAYTRAEELGNK--------- 187
Query 364 SIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGP 401
F L+IFDE H+ + M +LG ++ P
Sbjct 188 --FPLLIFDEVHHLPSEGYSIMAQLFASPYRLGLTATP 223
>6p4f_C C DNA-dependent ATPase XPBII
Length=440
Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
IL F+ G++ +++A++V DEG+D+ L I+ G + +Q GR
Sbjct 362 ILQKFR-DGEYRVIVASTVFDEGVDVPDATLAIVMGGYGTKRQFLQRLGR 410
Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 24/158 (15%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVY 303
R+YQ E +K K II PTG GKT V+L I K + I +
Sbjct 71 RDYQAEAVKAWLKEKRGIIVLPTGAGKTQVALKIVSI--------MKVATLIVVPTIDLI 122
Query 304 EQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSL 363
Q K +KY + GI G +++ ++ D + L N
Sbjct 123 TQWKERINKYLDFD----PGIIGGGEDSLKGITVI-TYDSAYTRAEELGNK--------- 168
Query 364 SIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGP 401
F L+IFDE H+ + M +LG ++ P
Sbjct 169 --FPLLIFDEVHHLPSEGYSIMAQLFASPYRLGLTATP 204
>8dpe_A A ATP-dependent RNA helicase DDX42
Length=444
Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 85/222 (38%), Gaps = 33/222 (15%)
Query 529 DEESRICKALFLY-----TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIE 583
DE R+ F Y SH+R L+ S R K ++ ++ ++
Sbjct 205 DEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKK-----IEKLARDILIDPIRVVQ 259
Query 584 QDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDAL 643
D+ + E+ Q +E + PS N ++ + +LFV +A + L
Sbjct 260 GDIGEAXEDVTQIVEILHSGPSKWN-------WLTRRLVEFTSSGSVLLFVTKKANAEEL 312
Query 644 KNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEG 703
N N K G+L G M + ++ FK D +L+AT VA G
Sbjct 313 AN----NLKQEGHNLGLLHG--------DMDQSERNKVISDFKKK-DIPVLVATDVAARG 359
Query 704 IDIAQCNLVILYEYVGNVIKMIQTRGR-GRA--RGSKCFLLT 742
+DI VI Y+ ++ GR GRA +G LLT
Sbjct 360 LDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLT 401
Score = 33.9 bits (76), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 31/136 (23%), Positives = 61/136 (45%), Gaps = 4/136 (3%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKT--FV-SLLICEHHLKKFPQGQKGKVVFFAN 298
+P Q + A+ G++ I A TG GKT F+ +LI K+ G V
Sbjct 73 QPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCP 132
Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358
+ +Q + ++ + + R + G + + + E +I++ TP L++++KK
Sbjct 133 TRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKK 192
Query 359 TIPSLSIFTLMIFDEC 374
+L + ++FDE
Sbjct 193 AT-NLQRVSYLVFDEA 207
>6p4w_C C DNA-dependent ATPase XPBII
Length=440
Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
IL F+ G++ +++A++V DEG+D+ L I+ G + +Q GR
Sbjct 362 ILQKFR-DGEYRVIVASTVFDEGVDVPDATLAIVMGGYGTKRQFLQRLGR 410
Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 24/158 (15%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVY 303
R+YQ E +K K II PTG GKT V+L I K + I +
Sbjct 71 RDYQAEAVKAWLKEKRGIIVLPTGAGKTQVALKIVSI--------MKVATLIVVPTIDLI 122
Query 304 EQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSL 363
Q K +KY + GI G +++ ++ D + L N
Sbjct 123 TQWKERINKYLDFD----PGIIGGGEDSLKGITVI-TYDSAYTRAEELGNK--------- 168
Query 364 SIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGP 401
F L+IFDE H+ + M +LG ++ P
Sbjct 169 --FPLLIFDEVHHLPSEGYSIMAQLFASPYRLGLTATP 204
>6p4f_A A DNA-dependent ATPase XPBII
Length=440
Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
IL F+ G++ +++A++V DEG+D+ L I+ G + +Q GR
Sbjct 362 ILQKFR-DGEYRVIVASTVFDEGVDVPDATLAIVMGGYGTKRQFLQRLGR 410
Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 24/158 (15%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVY 303
R+YQ E +K K II PTG GKT V+L I K + I +
Sbjct 71 RDYQAEAVKAWLKEKRGIIVLPTGAGKTQVALKIVSI--------MKVATLIVVPTIDLI 122
Query 304 EQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSL 363
Q K +KY + GI G +++ ++ D + L N
Sbjct 123 TQWKERINKYLDFD----PGIIGGGEDSLKGITVI-TYDSAYTRAEELGNK--------- 168
Query 364 SIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGP 401
F L+IFDE H+ + M +LG ++ P
Sbjct 169 --FPLLIFDEVHHLPSEGYSIMAQLFASPYRLGLTATP 204
>6p4w_A A DNA-dependent ATPase XPBII
Length=440
Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
IL F+ G++ +++A++V DEG+D+ L I+ G + +Q GR
Sbjct 362 ILQKFR-DGEYRVIVASTVFDEGVDVPDATLAIVMGGYGTKRQFLQRLGR 410
Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 24/158 (15%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVY 303
R+YQ E +K K II PTG GKT V+L I K + I +
Sbjct 71 RDYQAEAVKAWLKEKRGIIVLPTGAGKTQVALKIVSI--------MKVATLIVVPTIDLI 122
Query 304 EQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSL 363
Q K +KY + GI G +++ ++ D + L N
Sbjct 123 TQWKERINKYLDFD----PGIIGGGEDSLKGITVI-TYDSAYTRAEELGNK--------- 168
Query 364 SIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGP 401
F L+IFDE H+ + M +LG ++ P
Sbjct 169 --FPLLIFDEVHHLPSEGYSIMAQLFASPYRLGLTATP 204
>8q7w_F E Probable ATP-dependent RNA helicase DDX23
Length=820
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 88/228 (39%), Gaps = 31/228 (14%)
Query 524 QMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIE 583
Q PD DE K L + S KY ++ + A M A++ L + A +
Sbjct 575 QKPDTDEAEDPEKMLANFESGKHKYRQTVMFT--ATMPPAVERLARSYLRRPAVVYIGXX 632
Query 584 QDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDAL 643
+R E+K+ + +E+ K + L IL++ + + I+FV + D L
Sbjct 633 XXPHERVEQKVFLM--------SESEKRKKLLAILEQGF----DPPIIIFVNQKKGCDVL 680
Query 644 KNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEG 703
+E G ++ L KA G +IL+AT V
Sbjct 681 AKSLEK------------MGYNACTLXXXXXXXXREFALSNLKA-GAKDILVATDVXXXX 727
Query 704 IDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKC---FLLTSNAGV 747
IDI ++V+ Y+ N+ I GR GRA S FL ++ V
Sbjct 728 IDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAV 775
>2iwh_B B ELONGATION FACTOR 3A
Length=986
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/54 (30%), Positives = 24/54 (44%), Gaps = 0/54 (0%)
Query 262 ICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFE 315
IC P GCGK+ + I + FP ++ + V+ + I SV FE
Sbjct 466 ICGPNGCGKSTLMRAIANGQVDGFPTQEECRTVYVEHDIDGTHSDTSVLDFVFE 519
>7b7d_DC EF Elongation factor 3A
Length=1064
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/54 (30%), Positives = 24/54 (44%), Gaps = 0/54 (0%)
Query 262 ICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFE 315
IC P GCGK+ + I + FP ++ + V+ + I SV FE
Sbjct 461 ICGPNGCGKSTLMRAIANGQVDGFPTQEECRTVYVEHDIDGTHSDTSVLDFVFE 514
>5tnu_B B DNA-dependent ATPase XPBII
Length=459
Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
IL F+ G++ +++A++V DEG+D+ L I+ G + +Q GR
Sbjct 381 ILQKFR-DGEYRVIVASTVFDEGVDVPDATLAIVMGGYGTKRQFLQRLGR 429
Score = 34.7 bits (78), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 24/158 (15%)
Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVY 303
R+YQ E +K K II PTG GKT V+L I K + I +
Sbjct 90 RDYQAEAVKAWLKEKRGIIVLPTGAGKTQVALKIVSI--------MKVATLIVVPTIDLI 141
Query 304 EQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSL 363
Q K +KY + GI G +++ ++ D + L N
Sbjct 142 TQWKERINKYLDFD----PGIIGGGEDSLKGITVI-TYDSAYTRAEELGNK--------- 187
Query 364 SIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGP 401
F L+IFDE H+ + M +LG ++ P
Sbjct 188 --FPLLIFDEVHHLPSEGYSIMAQLFASPYRLGLTATP 223
>2iw3_B B ELONGATION FACTOR 3A
Length=1074
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/54 (30%), Positives = 24/54 (44%), Gaps = 0/54 (0%)
Query 262 ICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFE 315
IC P GCGK+ + I + FP ++ + V+ + I SV FE
Sbjct 466 ICGPNGCGKSTLMRAIANGQVDGFPTQEECRTVYVEHDIDGTHSDTSVLDFVFE 519
>2ix3_B B ELONGATION FACTOR 3
Length=986
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/54 (30%), Positives = 24/54 (44%), Gaps = 0/54 (0%)
Query 262 ICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFE 315
IC P GCGK+ + I + FP ++ + V+ + I SV FE
Sbjct 466 ICGPNGCGKSTLMRAIANGQVDGFPTQEECRTVYVEHDIDGTHSDTSVLDFVFE 519
>2ix3_A A ELONGATION FACTOR 3
Length=986
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/54 (30%), Positives = 24/54 (44%), Gaps = 0/54 (0%)
Query 262 ICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFE 315
IC P GCGK+ + I + FP ++ + V+ + I SV FE
Sbjct 466 ICGPNGCGKSTLMRAIANGQVDGFPTQEECRTVYVEHDIDGTHSDTSVLDFVFE 519
>2iwh_A A ELONGATION FACTOR 3A
Length=986
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/54 (30%), Positives = 24/54 (44%), Gaps = 0/54 (0%)
Query 262 ICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFE 315
IC P GCGK+ + I + FP ++ + V+ + I SV FE
Sbjct 466 ICGPNGCGKSTLMRAIANGQVDGFPTQEECRTVYVEHDIDGTHSDTSVLDFVFE 519
>2ix8_A A ELONGATION FACTOR 3A
Length=1064
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/54 (30%), Positives = 24/54 (44%), Gaps = 0/54 (0%)
Query 262 ICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFE 315
IC P GCGK+ + I + FP ++ + V+ + I SV FE
Sbjct 460 ICGPNGCGKSTLMRAIANGQVDGFPTQEECRTVYVEHDIDGTHSDTSVLDFVFE 513
>2iw3_A A ELONGATION FACTOR 3A
Length=1074
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/54 (30%), Positives = 24/54 (44%), Gaps = 0/54 (0%)
Query 262 ICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFE 315
IC P GCGK+ + I + FP ++ + V+ + I SV FE
Sbjct 466 ICGPNGCGKSTLMRAIANGQVDGFPTQEECRTVYVEHDIDGTHSDTSVLDFVFE 519
>6uv0_A A Probable ATP-dependent RNA helicase DDX17
Length=448
Score = 34.7 bits (78), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/115 (28%), Positives = 48/115 (42%), Gaps = 17/115 (15%)
Query 618 LQEEYHLNPETITILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTL 675
L EE TI+FV+T+ D L + +G P + G +Q
Sbjct 301 LMEEIMXXXXXKTIIFVETKRRCDDLTRRMRRDGWPAMCI--------HGDKSQ------ 346
Query 676 PAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
P + +L+ F+ SG ILIAT G+D+ VI Y+Y + + GR
Sbjct 347 PERDWVLNEFR-SGKAPILIATDXXXXGLDVEDVKFVINYDYPNSSEDYVHRIGR 400
>8q7x_F E Probable ATP-dependent RNA helicase DDX23
Length=820
Score = 34.7 bits (78), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 88/228 (39%), Gaps = 31/228 (14%)
Query 524 QMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIE 583
Q PD DE K L + S KY ++ + A M A++ L + A +
Sbjct 575 QKPDTDEAEDPEKMLANFESGKHKYRQTVMFT--ATMPPAVERLARSYLRRPAVVYIGXX 632
Query 584 QDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDAL 643
+R E+K+ + +E+ K + L IL++ + + I+FV + D L
Sbjct 633 XXPHERVEQKVFLM--------SESEKRKKLLAILEQGF----DPPIIIFVNQKKGCDVL 680
Query 644 KNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEG 703
+E G ++ L KA G +IL+AT V
Sbjct 681 AKSLEK------------MGYNACTLXXXXXXXXREFALSNLKA-GAKDILVATDVXXXX 727
Query 704 IDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKC---FLLTSNAGV 747
IDI ++V+ Y+ N+ I GR GRA S FL ++ V
Sbjct 728 IDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAV 775
>8h6j_FA 4U Probable ATP-dependent RNA helicase DDX23
Length=820
Score = 34.7 bits (78), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKC---FLLTS 743
+G +IL+AT V IDI ++V+ Y+ N+ I GR GRA S FL
Sbjct 712 AGAKDILVATDVXXXXIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKE 771
Query 744 NAGV 747
++ V
Sbjct 772 DSAV 775
>6qw6_X 5X Probable ATP-dependent RNA helicase DDX23
Length=820
Score = 34.7 bits (78), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKC---FLLTS 743
+G +IL+AT V IDI ++V+ Y+ N+ I GR GRA S FL
Sbjct 712 AGAKDILVATDVXXXXIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKE 771
Query 744 NAGV 747
++ V
Sbjct 772 DSAV 775
>6qx9_AA 5X Probable ATP-dependent RNA helicase DDX23
Length=820
Score = 34.7 bits (78), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKC---FLLTS 743
+G +IL+AT V IDI ++V+ Y+ N+ I GR GRA S FL
Sbjct 712 AGAKDILVATDVXXXXIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKE 771
Query 744 NAGV 747
++ V
Sbjct 772 DSAV 775
>8i9y_G CE RNA helicase
Length=598
Score = 34.3 bits (77), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/110 (24%), Positives = 46/110 (42%), Gaps = 10/110 (9%)
Query 253 PAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF---PQGQKGKVVFFANQIPVYEQQKSV 309
PA+ GK+ + A TG GKT L+ L P+ G +V P E +
Sbjct 144 PALAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLRFKPRNGTGAIVV----TPTRELALQI 199
Query 310 FS---KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356
F + + H + G E++ + +++I TP L+++L+
Sbjct 200 FGVARELMKYHSQTYGVVIGGANRRAEAEKLGKGVNLLIATPGRLLDHLQ 249
>8i9x_G CE RNA helicase
Length=598
Score = 34.3 bits (77), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/110 (24%), Positives = 46/110 (42%), Gaps = 10/110 (9%)
Query 253 PAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF---PQGQKGKVVFFANQIPVYEQQKSV 309
PA+ GK+ + A TG GKT L+ L P+ G +V P E +
Sbjct 144 PALAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLRFKPRNGTGAIVV----TPTRELALQI 199
Query 310 FS---KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356
F + + H + G E++ + +++I TP L+++L+
Sbjct 200 FGVARELMKYHSQTYGVVIGGANRRAEAEKLGKGVNLLIATPGRLLDHLQ 249
>8rc0_E D Probable ATP-dependent RNA helicase DDX23
Length=820
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKC---FLLTS 743
+G +IL+AT V IDI ++V+ Y+ N+ I GR GRA S FL
Sbjct 712 AGAKDILVATDVXXXXIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKE 771
Query 744 NAGV 747
++ V
Sbjct 772 DSAV 775
>6yvh_H K Eukaryotic initiation factor 4A-III
Length=166
Score = 33.1 bits (74), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (52%), Gaps = 1/60 (2%)
Query 678 QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSK 737
++ I+ F+ SG +LI+T V G+D+ Q +L+I Y+ N I GR G K
Sbjct 71 RESIMKEFR-SGASRVLISTDVWXXGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRK 129
>8i9z_G CE RNA helicase
Length=598
Score = 34.3 bits (77), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/110 (24%), Positives = 46/110 (42%), Gaps = 10/110 (9%)
Query 253 PAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF---PQGQKGKVVFFANQIPVYEQQKSV 309
PA+ GK+ + A TG GKT L+ L P+ G +V P E +
Sbjct 144 PALAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLRFKPRNGTGAIVV----TPTRELALQI 199
Query 310 FS---KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356
F + + H + G E++ + +++I TP L+++L+
Sbjct 200 FGVARELMKYHSQTYGVVIGGANRRAEAEKLGKGVNLLIATPGRLLDHLQ 249
>8i9p_F CE RNA helicase
Length=598
Score = 34.3 bits (77), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/110 (24%), Positives = 46/110 (42%), Gaps = 10/110 (9%)
Query 253 PAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF---PQGQKGKVVFFANQIPVYEQQKSV 309
PA+ GK+ + A TG GKT L+ L P+ G +V P E +
Sbjct 144 PALAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLRFKPRNGTGAIVV----TPTRELALQI 199
Query 310 FS---KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356
F + + H + G E++ + +++I TP L+++L+
Sbjct 200 FGVARELMKYHSQTYGVVIGGANRRAEAEKLGKGVNLLIATPGRLLDHLQ 249
>8i9t_G CE RNA helicase
Length=598
Score = 34.3 bits (77), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/110 (24%), Positives = 46/110 (42%), Gaps = 10/110 (9%)
Query 253 PAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF---PQGQKGKVVFFANQIPVYEQQKSV 309
PA+ GK+ + A TG GKT L+ L P+ G +V P E +
Sbjct 144 PALAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLRFKPRNGTGAIVV----TPTRELALQI 199
Query 310 FS---KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356
F + + H + G E++ + +++I TP L+++L+
Sbjct 200 FGVARELMKYHSQTYGVVIGGANRRAEAEKLGKGVNLLIATPGRLLDHLQ 249
>8ia0_G CE RNA helicase
Length=598
Score = 34.3 bits (77), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/110 (24%), Positives = 46/110 (42%), Gaps = 10/110 (9%)
Query 253 PAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF---PQGQKGKVVFFANQIPVYEQQKSV 309
PA+ GK+ + A TG GKT L+ L P+ G +V P E +
Sbjct 144 PALAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLRFKPRNGTGAIVV----TPTRELALQI 199
Query 310 FS---KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356
F + + H + G E++ + +++I TP L+++L+
Sbjct 200 FGVARELMKYHSQTYGVVIGGANRRAEAEKLGKGVNLLIATPGRLLDHLQ 249
>8i9w_F CE RNA helicase
Length=598
Score = 34.3 bits (77), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/110 (24%), Positives = 46/110 (42%), Gaps = 10/110 (9%)
Query 253 PAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF---PQGQKGKVVFFANQIPVYEQQKSV 309
PA+ GK+ + A TG GKT L+ L P+ G +V P E +
Sbjct 144 PALAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLRFKPRNGTGAIVV----TPTRELALQI 199
Query 310 FS---KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356
F + + H + G E++ + +++I TP L+++L+
Sbjct 200 FGVARELMKYHSQTYGVVIGGANRRAEAEKLGKGVNLLIATPGRLLDHLQ 249
>8i9r_F CE RNA helicase
Length=598
Score = 34.3 bits (77), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/110 (24%), Positives = 46/110 (42%), Gaps = 10/110 (9%)
Query 253 PAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF---PQGQKGKVVFFANQIPVYEQQKSV 309
PA+ GK+ + A TG GKT L+ L P+ G +V P E +
Sbjct 144 PALAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLRFKPRNGTGAIVV----TPTRELALQI 199
Query 310 FS---KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356
F + + H + G E++ + +++I TP L+++L+
Sbjct 200 FGVARELMKYHSQTYGVVIGGANRRAEAEKLGKGVNLLIATPGRLLDHLQ 249
>8i9v_G CE RNA helicase
Length=598
Score = 34.3 bits (77), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/110 (24%), Positives = 46/110 (42%), Gaps = 10/110 (9%)
Query 253 PAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF---PQGQKGKVVFFANQIPVYEQQKSV 309
PA+ GK+ + A TG GKT L+ L P+ G +V P E +
Sbjct 144 PALAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLRFKPRNGTGAIVV----TPTRELALQI 199
Query 310 FS---KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356
F + + H + G E++ + +++I TP L+++L+
Sbjct 200 FGVARELMKYHSQTYGVVIGGANRRAEAEKLGKGVNLLIATPGRLLDHLQ 249
>8qxd_V G Probable ATP-dependent RNA helicase DDX23
Length=820
Score = 34.3 bits (77), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKC---FLLTS 743
+G +IL+AT V IDI ++V+ Y+ N+ I GR GRA S FL
Sbjct 712 AGAKDILVATDVXXXXIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKE 771
Query 744 NAGV 747
++ V
Sbjct 772 DSAV 775
>7evn_E E ATP-dependent RNA helicase DDX42
Length=958
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 31/136 (23%), Positives = 61/136 (45%), Gaps = 4/136 (3%)
Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKT--FV-SLLICEHHLKKFPQGQKGKVVFFAN 298
+P Q + A+ G++ I A TG GKT F+ +LI K+ G V
Sbjct 295 QPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCP 354
Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358
+ +Q + ++ + + R + G + + + E +I++ TP L++++KK
Sbjct 355 TRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKK 414
Query 359 TIPSLSIFTLMIFDEC 374
+L + ++FDE
Sbjct 415 AT-NLQRVSYLVFDEA 429
>8bic_A A methyltransferase Plu4891
Length=335
Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 31/121 (26%), Positives = 49/121 (40%), Gaps = 8/121 (7%)
Query 536 KALFLYTSH---LRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEE 592
K F Y H R D+ + ++ + L + DF + R E +L R E
Sbjct 141 KPFFEYLDHHELFRSNFDSFMSKNSDKIIEKLLDIYDFSQHNRILDVGGGEGNLLIRINE 200
Query 593 KLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPK 652
K++ D NE P LED+ FI + + L P + +K + + NW + N
Sbjct 201 KIKGKHYAVLDRYNETPVLEDIEFINGDFFKLVPSGYDLYILK-----NVIHNWSDSNAI 255
Query 653 L 653
L
Sbjct 256 L 256
>7pru_B B Putative iron-sulfur protein
Length=700
Score = 34.3 bits (77), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/80 (28%), Positives = 35/80 (44%), Gaps = 4/80 (5%)
Query 199 DLEDKMETSDIQIFYQEDPECQNLSENSCPPSEVSDTNL-YSPFKPRNYQLELALPAMKG 257
D+E + + + +E P + L+ + Y P +P L L +PA G
Sbjct 410 DMETLFDLQKVNVTIREAPNAKPLALPKGGEIRFENVTFGYYPDRPILRNLSLTIPA--G 467
Query 258 KNTIICAPTGCGK-TFVSLL 276
K + P+GCGK T + LL
Sbjct 468 KKVAVVGPSGCGKSTLLRLL 487
>7pru_A A Putative iron-sulfur protein
Length=700
Score = 34.3 bits (77), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/80 (28%), Positives = 35/80 (44%), Gaps = 4/80 (5%)
Query 199 DLEDKMETSDIQIFYQEDPECQNLSENSCPPSEVSDTNL-YSPFKPRNYQLELALPAMKG 257
D+E + + + +E P + L+ + Y P +P L L +PA G
Sbjct 410 DMETLFDLQKVNVTIREAPNAKPLALPKGGEIRFENVTFGYYPDRPILRNLSLTIPA--G 467
Query 258 KNTIICAPTGCGK-TFVSLL 276
K + P+GCGK T + LL
Sbjct 468 KKVAVVGPSGCGKSTLLRLL 487
>2hjv_A A ATP-dependent RNA helicase dbpA
Length=163
Score = 33.1 bits (74), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (2%)
Query 672 GMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRG 731
GM + +++ FK G++ L+AT VA GIDI +LVI Y+ + GR
Sbjct 68 GMIQEDRFDVMNEFK-RGEYRYLVATDVAARGIDIENISLVINYDLPLEKESYVHRTGRT 126
Query 732 RARGSK 737
G+K
Sbjct 127 GRAGNK 132
>2fwr_B B DNA repair protein RAD25
Length=472
Score = 34.3 bits (77), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
IL+ F+ +G ++++ V DEGID+ N+ ++ G+ + IQ GR
Sbjct 386 ILEGFR-TGRFRAIVSSQVLDEGIDVPDANVGVIMSGSGSAREYIQRLGR 434
>7pqx_B B Putative iron-sulfur protein
Length=700
Score = 34.3 bits (77), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (47%), Gaps = 10/83 (12%)
Query 199 DLEDKMETSDIQIFYQEDPECQNLSENSCP-PSEVSDTNL---YSPFKPRNYQLELALPA 254
D+E + + + +E P + L+ P E+ N+ Y P +P L L +PA
Sbjct 410 DMETLFDLQKVNVTIREAPNAKPLA---LPKGGEIRFENVTFGYYPDRPILRNLSLTIPA 466
Query 255 MKGKNTIICAPTGCGK-TFVSLL 276
GK + P+GCGK T + LL
Sbjct 467 --GKKVAVVGPSGCGKSTLLRLL 487
>7psd_A B Putative iron-sulfur protein
Length=700
Score = 34.3 bits (77), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (47%), Gaps = 10/83 (12%)
Query 199 DLEDKMETSDIQIFYQEDPECQNLSENSCP-PSEVSDTNL---YSPFKPRNYQLELALPA 254
D+E + + + +E P + L+ P E+ N+ Y P +P L L +PA
Sbjct 410 DMETLFDLQKVNVTIREAPNAKPLA---LPKGGEIRFENVTFGYYPDRPILRNLSLTIPA 466
Query 255 MKGKNTIICAPTGCGK-TFVSLL 276
GK + P+GCGK T + LL
Sbjct 467 --GKKVAVVGPSGCGKSTLLRLL 487
>7pro_B B Putative iron-sulfur protein
Length=700
Score = 34.3 bits (77), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (47%), Gaps = 10/83 (12%)
Query 199 DLEDKMETSDIQIFYQEDPECQNLSENSCP-PSEVSDTNL---YSPFKPRNYQLELALPA 254
D+E + + + +E P + L+ P E+ N+ Y P +P L L +PA
Sbjct 410 DMETLFDLQKVNVTIREAPNAKPLA---LPKGGEIRFENVTFGYYPDRPILRNLSLTIPA 466
Query 255 MKGKNTIICAPTGCGK-TFVSLL 276
GK + P+GCGK T + LL
Sbjct 467 --GKKVAVVGPSGCGKSTLLRLL 487
>7pro_A A Putative iron-sulfur protein
Length=700
Score = 34.3 bits (77), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (47%), Gaps = 10/83 (12%)
Query 199 DLEDKMETSDIQIFYQEDPECQNLSENSCP-PSEVSDTNL---YSPFKPRNYQLELALPA 254
D+E + + + +E P + L+ P E+ N+ Y P +P L L +PA
Sbjct 410 DMETLFDLQKVNVTIREAPNAKPLA---LPKGGEIRFENVTFGYYPDRPILRNLSLTIPA 466
Query 255 MKGKNTIICAPTGCGK-TFVSLL 276
GK + P+GCGK T + LL
Sbjct 467 --GKKVAVVGPSGCGKSTLLRLL 487
>7pqx_A A Putative iron-sulfur protein
Length=700
Score = 34.3 bits (77), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (47%), Gaps = 10/83 (12%)
Query 199 DLEDKMETSDIQIFYQEDPECQNLSENSCP-PSEVSDTNL---YSPFKPRNYQLELALPA 254
D+E + + + +E P + L+ P E+ N+ Y P +P L L +PA
Sbjct 410 DMETLFDLQKVNVTIREAPNAKPLA---LPKGGEIRFENVTFGYYPDRPILRNLSLTIPA 466
Query 255 MKGKNTIICAPTGCGK-TFVSLL 276
GK + P+GCGK T + LL
Sbjct 467 --GKKVAVVGPSGCGKSTLLRLL 487
>7psd_B A Putative iron-sulfur protein
Length=700
Score = 34.3 bits (77), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (47%), Gaps = 10/83 (12%)
Query 199 DLEDKMETSDIQIFYQEDPECQNLSENSCP-PSEVSDTNL---YSPFKPRNYQLELALPA 254
D+E + + + +E P + L+ P E+ N+ Y P +P L L +PA
Sbjct 410 DMETLFDLQKVNVTIREAPNAKPLA---LPKGGEIRFENVTFGYYPDRPILRNLSLTIPA 466
Query 255 MKGKNTIICAPTGCGK-TFVSLL 276
GK + P+GCGK T + LL
Sbjct 467 --GKKVAVVGPSGCGKSTLLRLL 487
>4nho_A A Probable ATP-dependent RNA helicase DDX23
Length=496
Score = 34.3 bits (77), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 88/228 (39%), Gaps = 31/228 (14%)
Query 524 QMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIE 583
Q PD DE K L + S KY ++ + A M A++ L + A +
Sbjct 243 QKPDTDEAEDPEKMLANFESGKHKYRQTVMFT--ATMPPAVERLARSYLRRPAVVYIGSA 300
Query 584 QDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDAL 643
+R E+K+ + +E+ K + L IL++ + + I+FV + D L
Sbjct 301 GKPHERVEQKVFLM--------SESEKRKKLLAILEQGF----DPPIIIFVNQKKGCDVL 348
Query 644 KNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEG 703
+E G ++ L KA G +IL+AT V
Sbjct 349 AKSLEK------------MGYNACTLXXXXXXXXREFALSNLKA-GAKDILVATDVXXXX 395
Query 704 IDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKC---FLLTSNAGV 747
IDI ++V+ Y+ N+ I GR GRA S FL ++ V
Sbjct 396 IDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAV 443
>8bic_B B methyltransferase Plu4891
Length=335
Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 31/121 (26%), Positives = 49/121 (40%), Gaps = 8/121 (7%)
Query 536 KALFLYTSH---LRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEE 592
K F Y H R D+ + ++ + L + DF + R E +L R E
Sbjct 141 KPFFEYLDHHELFRSNFDSFMSKNSDKIIEKLLDIYDFSQHNRILDVGGGEGNLLIRINE 200
Query 593 KLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPK 652
K++ D NE P LED+ FI + + L P + +K + + NW + N
Sbjct 201 KIKGKHYAVLDRYNETPVLEDIEFINGDFFKLVPSGYDLYILK-----NVIHNWSDSNAI 255
Query 653 L 653
L
Sbjct 256 L 256
>7pr1_A A Putative iron-sulfur protein
Length=700
Score = 34.3 bits (77), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/80 (28%), Positives = 35/80 (44%), Gaps = 4/80 (5%)
Query 199 DLEDKMETSDIQIFYQEDPECQNLSENSCPPSEVSDTNL-YSPFKPRNYQLELALPAMKG 257
D+E + + + +E P + L+ + Y P +P L L +PA G
Sbjct 410 DMETLFDLQKVNVTIREAPNAKPLALPKGGEIRFENVTFGYYPDRPILRNLSLTIPA--G 467
Query 258 KNTIICAPTGCGK-TFVSLL 276
K + P+GCGK T + LL
Sbjct 468 KKVAVVGPSGCGKSTLLRLL 487
>7pr1_B B Putative iron-sulfur protein
Length=700
Score = 34.3 bits (77), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/80 (28%), Positives = 35/80 (44%), Gaps = 4/80 (5%)
Query 199 DLEDKMETSDIQIFYQEDPECQNLSENSCPPSEVSDTNL-YSPFKPRNYQLELALPAMKG 257
D+E + + + +E P + L+ + Y P +P L L +PA G
Sbjct 410 DMETLFDLQKVNVTIREAPNAKPLALPKGGEIRFENVTFGYYPDRPILRNLSLTIPA--G 467
Query 258 KNTIICAPTGCGK-TFVSLL 276
K + P+GCGK T + LL
Sbjct 468 KKVAVVGPSGCGKSTLLRLL 487
>2fwr_D D DNA repair protein RAD25
Length=472
Score = 34.3 bits (77), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
IL+ F+ +G ++++ V DEGID+ N+ ++ G+ + IQ GR
Sbjct 386 ILEGFR-TGRFRAIVSSQVLDEGIDVPDANVGVIMSGSGSAREYIQRLGR 434
>2fwr_C C DNA repair protein RAD25
Length=472
Score = 34.3 bits (77), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730
IL+ F+ +G ++++ V DEGID+ N+ ++ G+ + IQ GR
Sbjct 386 ILEGFR-TGRFRAIVSSQVLDEGIDVPDANVGVIMSGSGSAREYIQRLGR 434
>2hjv_B B ATP-dependent RNA helicase dbpA
Length=163
Score = 33.1 bits (74), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (2%)
Query 672 GMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRG 731
GM + +++ FK G++ L+AT VA GIDI +LVI Y+ + GR
Sbjct 68 GMIQEDRFDVMNEFK-RGEYRYLVATDVAARGIDIENISLVINYDLPLEKESYVHRTGRT 126
Query 732 RARGSK 737
G+K
Sbjct 127 GRAGNK 132
>3ear_A A Hera
Length=212
Score = 33.1 bits (74), Expect = 8.9, Method: Composition-based stats.
Identities = 16/35 (46%), Positives = 24/35 (69%), Gaps = 1/35 (3%)
Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILY 715
+L AF+ G+ +L+AT VA G+DI Q +LV+ Y
Sbjct 73 VLGAFR-QGEVRVLVATDVAARGLDIPQVDLVVHY 106
>2zu6_D D Eukaryotic initiation factor 4A-I
Length=388
Score = 33.9 bits (76), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (52%), Gaps = 1/52 (2%)
Query 680 CILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRG 731
I+ F+ SG +LI T + GID+ Q +LVI Y+ N I GRG
Sbjct 295 VIMREFR-SGSSXVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 345
Lambda K H a alpha
0.319 0.136 0.401 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 107650539742
Database: unitmol_20240605.fasta
Posted date: Jun 7, 2024 10:55 AM
Number of letters in database: 243,118,326
Number of sequences in database: 844,130
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40