[Multiple Alignment(many alignments)] [Alignment Bar(many alignments)] [show plain BLAST file]
BLASTP 2.11.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: unitmol_20240605.fasta
           844,130 sequences; 243,118,326 total letters



Query= sp|O95786|RIGI_HUMAN Antiviral innate immune response receptor RIG-I
OS=Homo sapiens OX=9606 GN=RIGI PE=1 SV=2

Length=925
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

8dvs_A A Antiviral innate immune response receptor RIG-I              1420    0.0   
7to0_A A Antiviral innate immune response receptor RIG-I              1420    0.0   
7tnz_A A Antiviral innate immune response receptor RIG-I              1417    0.0   
5f9f_I I Probable ATP-dependent RNA helicase DDX58                    1402    0.0   
5f9f_A A Probable ATP-dependent RNA helicase DDX58                    1402    0.0   
6kyv_F F Probable ATP-dependent RNA helicase DDX58                    1399    0.0   
6kyv_H H Probable ATP-dependent RNA helicase DDX58                    1399    0.0   
6kyv_B B Probable ATP-dependent RNA helicase DDX58                    1399    0.0   
6kyv_L L Probable ATP-dependent RNA helicase DDX58                    1399    0.0   
6kyv_J J Probable ATP-dependent RNA helicase DDX58                    1399    0.0   
6kyv_D D Probable ATP-dependent RNA helicase DDX58                    1399    0.0   
5f9f_E E Probable ATP-dependent RNA helicase DDX58                    1398    0.0   
5f9f_K K Probable ATP-dependent RNA helicase DDX58                    1397    0.0   
5f9f_G G Probable ATP-dependent RNA helicase DDX58                    1391    0.0   
7to2_A A Antiviral innate immune response receptor RIG-I              1391    0.0   
5f9f_C C Probable ATP-dependent RNA helicase DDX58                    1389    0.0   
8dvu_A A Antiviral innate immune response receptor RIG-I              1389    0.0   
7tny_A A Antiviral innate immune response receptor RIG-I              1382    0.0   
7jl1_A A Antiviral innate immune response receptor RIG-I              1358    0.0   
5f9h_G G Probable ATP-dependent RNA helicase DDX58                    1350    0.0   
5f98_A A Probable ATP-dependent RNA helicase DDX58                    1343    0.0   
7jl3_A A Antiviral innate immune response receptor RIG-I              1343    0.0   
7jl3_C C Antiviral innate immune response receptor RIG-I              1343    0.0   
7jl3_E E Antiviral innate immune response receptor RIG-I              1343    0.0   
6gpg_C A Probable ATP-dependent RNA helicase DDX58                    1341    0.0   
5f98_C C Probable ATP-dependent RNA helicase DDX58                    1340    0.0   
5f98_G G Probable ATP-dependent RNA helicase DDX58                    1337    0.0   
5f98_I I Probable ATP-dependent RNA helicase DDX58                    1337    0.0   
5f9h_C C Probable ATP-dependent RNA helicase DDX58                    1336    0.0   
7tnx_A A Antiviral innate immune response receptor RIG-I              1333    0.0   
8g7v_A A Antiviral innate immune response receptor RIG-I              1333    0.0   
8g7u_A A Antiviral innate immune response receptor RIG-I              1333    0.0   
8g7t_A A Antiviral innate immune response receptor RIG-I              1333    0.0   
5f9h_A A Probable ATP-dependent RNA helicase DDX58                    1333    0.0   
5f9h_I I Probable ATP-dependent RNA helicase DDX58                    1330    0.0   
5f98_K K Probable ATP-dependent RNA helicase DDX58                    1329    0.0   
5e3h_A A Probable ATP-dependent RNA helicase DDX58                    1325    0.0   
5f98_E E Probable ATP-dependent RNA helicase DDX58                    1321    0.0   
5f9h_E E Probable ATP-dependent RNA helicase DDX58                    1313    0.0   
5f9h_K K Probable ATP-dependent RNA helicase DDX58                    1310    0.0   
8sd0_A A Antiviral innate immune response receptor RIG-I              1306    0.0   
8scz_A A Antiviral innate immune response receptor RIG-I              1304    0.0   
8dvr_A A Antiviral innate immune response receptor RIG-I              1304    0.0   
7to1_A A Antiviral innate immune response receptor RIG-I              1304    0.0   
2ykg_A A PROBABLE ATP-DEPENDENT RNA HELICASE DDX58                    1297    0.0   
8g7u_C C Antiviral innate immune response receptor RIG-I              1295    0.0   
3zd6_A A PROBABLE ATP-DEPENDENT RNA HELICASE DDX58                    1290    0.0   
4bpb_A A PROBABLE ATP-DEPENDENT RNA HELICASE DDX58                    1288    0.0   
4ay2_A A PROBABLE ATP-DEPENDENT RNA HELICASE DDX58                    1281    0.0   
3zd7_A A PROBABLE ATP-DEPENDENT RNA HELICASE DDX58                    1263    0.0   
8g7v_C C Antiviral innate immune response receptor RIG-I              1262    0.0   
8g7t_C C Antiviral innate immune response receptor RIG-I              1257    0.0   
4on9_A A Probable ATP-dependent RNA helicase DDX58                    1049    0.0   
4on9_B B Probable ATP-dependent RNA helicase DDX58                    1006    0.0   
3tbk_A A RIG-I Helicase Domain                                        829     0.0   
4a36_A A RETINOIC ACID INDUCIBLE PROTEIN I                            653     0.0   
4a36_B B RETINOIC ACID INDUCIBLE PROTEIN I                            647     0.0   
4a2w_A A RETINOIC ACID INDUCIBLE PROTEIN I                            589     0.0   
4a2q_B B RETINOIC ACID INDUCIBLE PROTEIN I                            583     0.0   
4a2w_B B RETINOIC ACID INDUCIBLE PROTEIN I                            582     0.0   
4a2q_A A RETINOIC ACID INDUCIBLE PROTEIN I                            581     0.0   
4a2q_C D RETINOIC ACID INDUCIBLE PROTEIN I                            577     0.0   
4a2q_D E RETINOIC ACID INDUCIBLE PROTEIN I                            576     0.0   
4a2p_A A RETINOIC ACID INDUCIBLE PROTEIN I                            564     0.0   
4nqk_D D Probable ATP-dependent RNA helicase DDX58                    388     2e-128
4nqk_C C Probable ATP-dependent RNA helicase DDX58                    388     2e-128
4nqk_B B Probable ATP-dependent RNA helicase DDX58                    388     2e-128
4nqk_A A Probable ATP-dependent RNA helicase DDX58                    388     2e-128
4p4h_F F Probable ATP-dependent RNA helicase DDX58                    388     2e-128
4p4h_G G Probable ATP-dependent RNA helicase DDX58                    388     2e-128
4p4h_B B Probable ATP-dependent RNA helicase DDX58                    388     2e-128
4p4h_C C Probable ATP-dependent RNA helicase DDX58                    388     2e-128
4p4h_E E Probable ATP-dependent RNA helicase DDX58                    386     1e-127
4p4h_A A Probable ATP-dependent RNA helicase DDX58                    386     1e-127
4p4h_D D Probable ATP-dependent RNA helicase DDX58                    386     1e-127
4p4h_H H Probable ATP-dependent RNA helicase DDX58                    386     1e-127
6g19_A A Interferon-induced helicase C domain-containing protein 1    369     2e-114
5jc3_A A Melanoma differentiation associated protein-5                369     3e-114
5jc3_D B Melanoma differentiation associated protein-5                365     6e-113
5jch_A A Melanoma differentiation associated protein-5                365     1e-112
5jcf_A A Melanoma differentiation associated protein-5                364     3e-112
5jcf_D B Melanoma differentiation associated protein-5                363     3e-112
6gjz_A A Interferon-induced helicase C domain-containing protein 1    369     3e-111
5jch_D B Melanoma differentiation associated protein-5                361     3e-111
6gkm_A A Interferon-induced helicase C domain-containing protein 1    368     9e-111
5jc7_B B Melanoma differentiation associated protein-5                360     9e-111
5jc7_A A Melanoma differentiation associated protein-5                359     1e-110
6gkh_A A Interferon-induced helicase C domain-containing protein 1    365     9e-110
7bkp_A A Interferon-induced helicase C domain-containing protein 1    358     5e-107
7jl2_E C Interferon-induced helicase C domain-containing protein 1    351     6e-107
7jl2_C A Interferon-induced helicase C domain-containing protein 1    351     6e-107
7jl2_G E Interferon-induced helicase C domain-containing protein 1    351     6e-107
7jl0_C A Interferon-induced helicase C domain-containing protein 1    351     6e-107
6g1s_A A Interferon-induced helicase C domain-containing protein 1    348     1e-106
6g1x_A A Interferon-induced helicase C domain-containing protein 1    347     3e-106
6h66_A A Interferon-induced helicase C domain-containing protein 1    355     3e-106
7nic_A A Interferon-induced helicase C domain-containing protein 1    355     5e-106
4gl2_A A Interferon-induced helicase C domain-containing protein 1    345     4e-105
4gl2_B B Interferon-induced helicase C domain-containing protein 1    343     1e-104
5jb2_A A LGP2                                                         342     3e-104
6h61_A A Interferon-induced helicase C domain-containing protein 1    350     3e-104
7niq_A B Interferon-induced helicase C domain-containing protein 1    348     3e-103
5jbg_A A LGP2                                                         338     5e-103
5jaj_A A LGP2                                                         338     1e-102
6bzh_C C Probable ATP-dependent RNA helicase DDX58                    303     4e-96 
6bzh_B B Probable ATP-dependent RNA helicase DDX58                    303     4e-96 
6bzh_E E Probable ATP-dependent RNA helicase DDX58                    303     6e-96 
6bzh_A A Probable ATP-dependent RNA helicase DDX58                    303     6e-96 
6bzh_D D Probable ATP-dependent RNA helicase DDX58                    303     6e-96 
5jbj_A A LGP2                                                         319     1e-95 
7nga_C A Interferon-induced helicase C domain-containing protein 1    320     5e-93 
7bkq_A A Isoform 2 of Interferon-induced helicase C domain-contai...  310     5e-92 
2rmj_A A Probable ATP-dependent RNA helicase DDX58                    285     3e-90 
3og8_B B Antiviral innate immune response receptor RIG-I              262     2e-81 
7bah_B B Antiviral innate immune response receptor RIG-I              261     2e-81 
3og8_A A Antiviral innate immune response receptor RIG-I              259     1e-80 
7mk1_B B Antiviral innate immune response receptor RIG-I              259     1e-80 
7mk1_A A Antiviral innate immune response receptor RIG-I              259     1e-80 
7bah_A A Antiviral innate immune response receptor RIG-I              259     1e-80 
7bai_B B Antiviral innate immune response receptor RIG-I              259     2e-80 
2qfd_A A Probable ATP-dependent RNA helicase DDX58                    259     3e-80 
2qfb_J J Probable ATP-dependent RNA helicase DDX58                    259     3e-80 
2qfb_I I Probable ATP-dependent RNA helicase DDX58                    259     3e-80 
2qfb_H H Probable ATP-dependent RNA helicase DDX58                    259     3e-80 
2qfb_G G Probable ATP-dependent RNA helicase DDX58                    259     3e-80 
2qfb_F F Probable ATP-dependent RNA helicase DDX58                    259     3e-80 
2qfb_E E Probable ATP-dependent RNA helicase DDX58                    259     3e-80 
2qfb_D D Probable ATP-dependent RNA helicase DDX58                    259     3e-80 
2qfb_C C Probable ATP-dependent RNA helicase DDX58                    259     3e-80 
2qfd_J J Probable ATP-dependent RNA helicase DDX58                    259     3e-80 
2qfd_I I Probable ATP-dependent RNA helicase DDX58                    259     3e-80 
2qfd_H H Probable ATP-dependent RNA helicase DDX58                    259     3e-80 
2qfd_G G Probable ATP-dependent RNA helicase DDX58                    259     3e-80 
2qfd_B B Probable ATP-dependent RNA helicase DDX58                    259     3e-80 
2qfd_F F Probable ATP-dependent RNA helicase DDX58                    259     3e-80 
2qfd_E E Probable ATP-dependent RNA helicase DDX58                    259     3e-80 
2qfd_D D Probable ATP-dependent RNA helicase DDX58                    259     3e-80 
2qfd_C C Probable ATP-dependent RNA helicase DDX58                    259     3e-80 
2qfb_B B Probable ATP-dependent RNA helicase DDX58                    259     3e-80 
2qfb_A A Probable ATP-dependent RNA helicase DDX58                    259     3e-80 
7bai_A A Antiviral innate immune response receptor RIG-I              258     6e-80 
3ncu_B B RIG-I                                                        258     8e-80 
3ncu_A A RIG-I                                                        258     8e-80 
3lrr_B B Probable ATP-dependent RNA helicase DDX58                    256     2e-79 
3lrr_A A Probable ATP-dependent RNA helicase DDX58                    256     2e-79 
3lrn_A A Probable ATP-dependent RNA helicase DDX58                    256     2e-79 
3lrn_B B Probable ATP-dependent RNA helicase DDX58                    256     2e-79 
7bai_E E Antiviral innate immune response receptor RIG-I              255     6e-79 
8t5s_A A Dicer-related helicase                                       256     5e-70 
2lwd_A A Probable ATP-dependent RNA helicase DDX58                    192     2e-56 
2lwe_A A Probable ATP-dependent RNA helicase DDX58                    189     2e-55 
4a2x_C C RETINOIC ACID INDUCIBLE PROTEIN I                            134     3e-35 
4a2x_B B RETINOIC ACID INDUCIBLE PROTEIN I                            134     3e-35 
4a2x_A A RETINOIC ACID INDUCIBLE PROTEIN I                            134     3e-35 
4a2x_D D RETINOIC ACID INDUCIBLE PROTEIN I                            134     3e-35 
4a2v_A A RETINOIC ACID INDUCIBLE PROTEIN I                            133     5e-35 
1wp9_A A ATP-dependent RNA helicase, putative                         129     6e-30 
1wp9_B B ATP-dependent RNA helicase, putative                         128     9e-30 
3b6e_A A Interferon-induced helicase C domain-containing protein 1    119     6e-29 
1wp9_F F ATP-dependent RNA helicase, putative                         125     6e-29 
1wp9_E E ATP-dependent RNA helicase, putative                         125     6e-29 
1wp9_C C ATP-dependent RNA helicase, putative                         125     6e-29 
1wp9_D D ATP-dependent RNA helicase, putative                         125     7e-29 
4i1s_A A Melanoma differentiation associated protein-5                114     9e-27 
7w0e_C A Dicer-2, isoform A                                           95.9    1e-18 
7w0f_A A Dicer-2, isoform A                                           95.9    1e-18 
7w0d_D A Dicer-2, isoform A                                           95.9    1e-18 
7w0d_E F Dicer-2, isoform A                                           95.5    1e-18 
7w0b_A A Dicer-2, isoform A                                           95.5    1e-18 
8hf1_D D Dicer-2, isoform A                                           95.5    1e-18 
8hf1_A A Dicer-2, isoform A                                           95.5    1e-18 
8hf1_G G Dicer-2, isoform A                                           95.5    1e-18 
8hf0_A A Dicer-2, isoform A                                           95.5    1e-18 
8hf0_D D Dicer-2, isoform A                                           95.5    1e-18 
7w0c_A A Dicer-2, isoform A                                           95.5    2e-18 
7w0a_H E Dicer-2, isoform A                                           95.1    2e-18 
7w0a_A A Dicer-2, isoform A                                           95.1    2e-18 
7eld_A A Endoribonuclease Dicer homolog 1                             76.3    1e-12 
7ele_A A Endoribonuclease Dicer homolog 1                             76.3    1e-12 
7xw3_A A Endoribonuclease Dicer                                       75.1    3e-12 
5zam_A A Endoribonuclease Dicer                                       72.0    3e-11 
5zal_A A Endoribonuclease Dicer                                       72.0    3e-11 
5zak_A A Endoribonuclease Dicer                                       72.0    3e-11 
7yym_A A Endoribonuclease Dicer                                       71.2    4e-11 
7yz4_A A Endoribonuclease Dicer                                       71.2    4e-11 
7zpj_A A Endoribonuclease Dicer                                       71.2    4e-11 
7zpk_A A Endoribonuclease Dicer                                       71.2    4e-11 
7v6c_A A Dicer-2, isoform A                                           66.2    1e-09 
7v6b_A A Dicer-2, isoform A                                           66.2    1e-09 
3ga3_A A Interferon-induced helicase C domain-containing protein ...  60.5    2e-09 
2rqb_A A Interferon-induced helicase C domain-containing protein 1    59.7    3e-09 
6bua_A A Dicer-2, isoform A                                           63.2    1e-08 
3ts9_A A Interferon-induced helicase C domain-containing protein 1    55.5    9e-08 
2rqa_A A ATP-dependent RNA helicase DHX58                             53.5    5e-07 
3eqt_A A ATP-dependent RNA helicase DHX58                             53.1    7e-07 
3eqt_B B ATP-dependent RNA helicase DHX58                             53.1    7e-07 
2w4r_A A PROBABLE ATP-DEPENDENT RNA HELICASE DHX58                    52.8    1e-06 
2w4r_D D PROBABLE ATP-DEPENDENT RNA HELICASE DHX58                    50.1    9e-06 
2w4r_C C PROBABLE ATP-DEPENDENT RNA HELICASE DHX58                    50.1    9e-06 
2w4r_B B PROBABLE ATP-DEPENDENT RNA HELICASE DHX58                    50.1    9e-06 
5v9x_A A ATP-dependent DNA helicase                                   51.2    5e-05 
6qws_A A Pre-mRNA splicing helicase-like protein                      50.4    1e-04 
5m59_H G Pre-mRNA splicing helicase-like protein                      50.4    1e-04 
6qv4_A A Pre-mRNA splicing helicase-like protein                      50.4    1e-04 
6qv3_A A Pre-mRNA splicing helicase-like protein                      50.4    1e-04 
5m59_F E Pre-mRNA splicing helicase-like protein                      50.4    1e-04 
5m59_B A Pre-mRNA splicing helicase-like protein                      50.1    1e-04 
5m59_D C Pre-mRNA splicing helicase-like protein                      50.1    1e-04 
8dfv_A A Endoribonuclease Dcr-1                                       48.5    4e-04 
8dg5_A A Endoribonuclease Dcr-1                                       48.5    5e-04 
8dg7_A A Endoribonuclease Dcr-1                                       48.5    5e-04 
8dgi_A A Endoribonuclease Dcr-1                                       48.1    5e-04 
8dgj_A A Endoribonuclease Dcr-1                                       48.1    5e-04 
6bu9_A A Dicer-2, isoform A                                           47.4    8e-04 
8alz_B B Activating signal cointegrator 1 complex subunit 3           46.2    0.002 
8y6o_I I Probable ATP-dependent RNA helicase DDX23                    45.4    0.003 
2zj5_A A Putative ski2-type helicase                                  45.4    0.003 
2zj2_A A Putative ski2-type helicase                                  45.4    0.003 
2zj8_A A Putative ski2-type helicase                                  45.1    0.004 
2zja_A A Putative ski2-type helicase                                  45.1    0.004 
7vpx_L E Probable ATP-dependent RNA helicase DDX46                    43.9    0.009 
7evo_L E RNA helicase                                                 43.9    0.009 
6y5q_F p Probable ATP-dependent RNA helicase DDX46                    43.5    0.012 
8arp_A A ATP-dependent RNA helicase DBP2                              43.1    0.013 
8arp_F F ATP-dependent RNA helicase DBP2                              43.1    0.013 
8arp_C C ATP-dependent RNA helicase DBP2                              43.1    0.013 
8ark_A A ATP-dependent RNA helicase DBP2                              43.1    0.013 
8ark_B B ATP-dependent RNA helicase DBP2                              43.1    0.013 
8arp_E E ATP-dependent RNA helicase DBP2                              43.1    0.013 
8arp_D D ATP-dependent RNA helicase DBP2                              43.1    0.013 
8arp_B B ATP-dependent RNA helicase DBP2                              43.1    0.013 
6y53_D p Probable ATP-dependent RNA helicase DDX46                    42.4    0.029 
8dga_A A Endoribonuclease Dcr-1                                       42.4    0.029 
3jcm_I N Pre-mRNA-splicing helicase BRR2                              42.4    0.031 
5m5p_A A Pre-mRNA-splicing helicase BRR2                              42.4    0.032 
5dca_A A Pre-mRNA-splicing helicase BRR2                              42.4    0.032 
5m5p_C C Pre-mRNA-splicing helicase BRR2                              42.4    0.034 
5a9f_A A DNA POLYMERASE THETA                                         42.0    0.034 
5lqw_C C Pre-mRNA-splicing helicase BRR2                              42.0    0.036 
9bha_A A DNA polymerase theta                                         42.0    0.036 
9bha_B B DNA polymerase theta                                         42.0    0.037 
5m52_A A Pre-mRNA-splicing helicase BRR2                              42.0    0.037 
5gan_I B Pre-mRNA-splicing helicase BRR2                              42.0    0.037 
5m52_C B Pre-mRNA-splicing helicase BRR2                              42.0    0.038 
9bh9_A A DNA polymerase theta                                         42.0    0.038 
9bh9_B B DNA polymerase theta                                         42.0    0.038 
9bh8_A A DNA polymerase theta                                         42.0    0.038 
9bh8_B B DNA polymerase theta                                         42.0    0.038 
5aga_A A DNA POLYMERASE THETA                                         42.0    0.038 
5gm6_B B Pre-mRNA-splicing helicase BRR2                              42.0    0.038 
6uv1_A A Probable ATP-dependent RNA helicase DDX17                    41.6    0.038 
4bgd_A A PRE-MRNA-SPLICING HELICASE BRR2                              42.0    0.039 
5gao_I B Pre-mRNA-splicing helicase BRR2                              42.0    0.039 
5lj5_G B Pre-mRNA-splicing helicase BRR2                              42.0    0.039 
7b9v_E B Pre-mRNA-splicing helicase BRR2                              42.0    0.039 
5a9j_C C DNA POLYMERASE THETA                                         42.0    0.040 
5zwm_AA D Pre-mRNA-splicing helicase BRR2                             42.0    0.041 
5nrl_I B Pre-mRNA-splicing helicase BRR2                              42.0    0.041 
5zwo_AA D Pre-mRNA-splicing helicase BRR2                             42.0    0.041 
9bh7_B B DNA polymerase theta                                         41.6    0.041 
9bh7_A A DNA polymerase theta                                         41.6    0.041 
5a9j_B B DNA POLYMERASE THETA                                         41.6    0.042 
6uv1_B B Probable ATP-dependent RNA helicase DDX17                    41.6    0.042 
6uv2_A A Probable ATP-dependent RNA helicase DDX17                    41.6    0.042 
9bh6_A A DNA polymerase theta                                         41.6    0.043 
9bh6_D D DNA polymerase theta                                         41.6    0.043 
9bh6_B B DNA polymerase theta                                         41.6    0.043 
9bh6_C C DNA polymerase theta                                         41.6    0.043 
5a9j_D D DNA POLYMERASE THETA                                         41.6    0.043 
4kbf_A A Heat resistant RNA dependent ATPase                          41.2    0.044 
4kbf_B B Heat resistant RNA dependent ATPase                          41.2    0.044 
4kbg_B B Heat resistant RNA dependent ATPase                          41.2    0.044 
5a9j_A A DNA POLYMERASE THETA                                         41.6    0.044 
7dco_D D BRR2 isoform 1                                               42.0    0.044 
6uv4_A A Probable ATP-dependent RNA helicase DDX17                    41.2    0.047 
6uv3_A A Probable ATP-dependent RNA helicase DDX17                    41.2    0.048 
2z0m_A A 337aa long hypothetical ATP-dependent RNA helicase deaD      40.8    0.058 
6znq_A A Uncharacterized ATP-dependent helicase YprA                  41.2    0.066 
6znp_A A Uncharacterized ATP-dependent helicase YprA                  41.2    0.066 
6znq_B B Uncharacterized ATP-dependent helicase YprA                  40.8    0.078 
6znp_B B Uncharacterized ATP-dependent helicase YprA                  40.8    0.084 
8ark_C C ATP-dependent RNA helicase DBP2                              40.4    0.10  
8he5_O O DNA repair protein                                           40.0    0.16  
7bdk_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          40.0    0.16  
1fuk_A A EUKARYOTIC INITIATION FACTOR 4A                              37.7    0.22  
4kbg_A A Heat resistant RNA dependent ATPase                          38.5    0.28  
7zuw_BC CA RQC trigger complex helicase SLH1                          39.3    0.29  
7zrs_BC CA RQC trigger complex helicase SLH1                          39.3    0.29  
7zpq_BC CA SLH1 isoform 1                                             39.3    0.29  
6p66_A A DNA repair protein RAD25                                     38.5    0.32  
8vx9_B B HamB                                                         38.9    0.34  
5urk_A A U5 small nuclear ribonucleoprotein 200 kDa helicase          38.9    0.34  
6p66_C C DNA repair protein RAD25                                     38.5    0.35  
2fwr_A A DNA repair protein RAD25                                     38.5    0.36  
8r0a_M B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.9    0.36  
8h6j_M 5D U5 small nuclear ribonucleoprotein 200 kDa helicase         38.9    0.36  
8h6e_M 5D U5 small nuclear ribonucleoprotein 200 kDa helicase         38.9    0.36  
6qx9_RB 5B U5 small nuclear ribonucleoprotein 200 kDa helicase        38.9    0.36  
6qw6_S 5B U5 small nuclear ribonucleoprotein 200 kDa helicase         38.9    0.36  
8qxd_B B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.9    0.36  
8y6o_E E U5 small nuclear ribonucleoprotein 200 kDa helicase          38.9    0.36  
8r08_L B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.9    0.36  
6ah0_B D U5 small nuclear ribonucleoprotein 200 kDa helicase          38.9    0.37  
8vxy_D B HamB                                                         38.9    0.37  
5yzg_D D U5 small nuclear ribonucleoprotein 200 kDa helicase          38.9    0.39  
8vxc_B A HamB                                                         38.5    0.40  
8vxa_C A HamB                                                         38.5    0.40  
3jcr_C C hBrr2                                                        38.5    0.41  
1gm5_A A RECG                                                         38.5    0.42  
7a5p_NA q U5 small nuclear ribonucleoprotein 200 kDa helicase         38.5    0.42  
7bdj_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.44  
7dvq_D D U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.46  
5urm_B B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.47  
4f93_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.48  
4f92_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.48  
6s8q_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.48  
8bcc_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.48  
8bcg_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.48  
7bdl_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.48  
7bdi_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.48  
7px3_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.48  
6s8o_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.49  
7os2_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.49  
4f91_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.49  
8bch_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.49  
8q7x_C B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.50  
8c6j_I B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.50  
8rc0_G B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.50  
8bcb_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.50  
8bce_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.50  
8bc8_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.50  
8bc9_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.50  
6qdv_H B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.51  
5urm_A A U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.51  
4kit_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.51  
8bcd_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.51  
8bcf_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.51  
8bca_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.51  
5o9z_C C U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.51  
8qo9_JA B U5 small nuclear ribonucleoprotein 200 kDa helicase         38.5    0.51  
8qzs_B B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.51  
6icz_YA D U5 small nuclear ribonucleoprotein 200 kDa helicase         38.5    0.51  
6ahd_KB D Brr2, U5 small nuclear ribonucleoprotein 200 kDa helicase   38.5    0.51  
7abi_M s U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.51  
7abg_H s U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.51  
8h6k_E 5D U5 small nuclear ribonucleoprotein 200 kDa helicase         38.5    0.51  
5z58_D D U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.51  
5z57_D D U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.51  
5z56_D D U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.51  
8ch6_JA c U5 small nuclear ribonucleoprotein 200 kDa helicase         38.5    0.51  
7w5b_D D U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.51  
5xjc_D D U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.51  
6ff7_GB r U5 small nuclear ribonucleoprotein 200 kDa helicase         38.5    0.51  
8h6l_E 5D U5 small nuclear ribonucleoprotein 200 kDa helicase         38.5    0.51  
7os1_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.52  
6s9i_A B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.52  
8r0b_B B U5 small nuclear ribonucleoprotein 200 kDa helicase          38.5    0.52  
8r09_JA B U5 small nuclear ribonucleoprotein 200 kDa helicase         38.5    0.52  
8rm5_JA B U5 small nuclear ribonucleoprotein 200 kDa helicase         38.5    0.52  
1fuu_B B YEAST INITIATION FACTOR 4A                                   37.7    0.59  
5urj_A A U5 small nuclear ribonucleoprotein 200 kDa helicase          37.7    0.76  
7ase_A f kDDX60                                                       37.7    0.78  
7ask_A F kDDX60                                                       37.7    0.78  
4d25_A A BMVLG PROTEIN                                                37.4    0.79  
4d26_A A BMVLG PROTEIN                                                37.4    0.79  
4ovy_A A Haloacid dehalogenase domain protein hydrolase               36.6    1.1   
2fzl_A A DNA repair protein RAD25, XPB                                35.8    1.4   
7dni_E A Interferon-induced helicase C domain-containing protein 1    34.7    3.0   
3jcr_F F hPrp28                                                       35.4    3.2   
7dni_F B Interferon-induced helicase C domain-containing protein 1    34.7    3.3   
2va8_B B SKI2-TYPE HELICASE                                           35.4    3.4   
3nej_A A Heat resistant RNA dependent ATPase                          34.7    3.4   
5gju_A A ATP-dependent RNA helicase DeaD                              34.7    3.4   
2va8_A A SKI2-TYPE HELICASE                                           35.4    3.4   
2vsx_B B ATP-DEPENDENT RNA HELICASE EIF4A                             35.0    3.6   
2vso_B B ATP-DEPENDENT RNA HELICASE EIF4A                             35.0    3.6   
2vsx_A A ATP-DEPENDENT RNA HELICASE EIF4A                             35.0    3.6   
2vso_A A ATP-DEPENDENT RNA HELICASE EIF4A                             35.0    3.6   
2gxs_A A heat resistant RNA dependent ATPase                          34.3    3.7   
2gxu_A A heat resistant RNA dependent ATPase                          34.3    3.7   
2gxs_B B heat resistant RNA dependent ATPase                          34.3    3.7   
2gxq_A A heat resistant RNA dependent ATPase                          34.3    3.7   
7dnj_D D Interferon-induced helicase C domain-containing protein 1    34.3    3.9   
7dnj_C C Interferon-induced helicase C domain-containing protein 1    34.3    3.9   
7dnj_B B Interferon-induced helicase C domain-containing protein 1    34.3    3.9   
7dnj_A A Interferon-induced helicase C domain-containing protein 1    34.3    3.9   
7dni_H D Interferon-induced helicase C domain-containing protein 1    34.3    3.9   
7dni_G C Interferon-induced helicase C domain-containing protein 1    34.3    3.9   
3nbf_B B Heat resistant RNA dependent ATPase                          34.3    4.0   
3nbf_C C Heat resistant RNA dependent ATPase                          34.3    4.0   
3mwj_A A Heat resistant RNA dependent ATPase                          34.3    4.0   
3nbf_A A Heat resistant RNA dependent ATPase                          34.3    4.0   
3mwk_B B Heat resistant RNA dependent ATPase                          34.3    4.0   
3mwl_A A Heat resistant RNA dependent ATPase                          34.3    4.0   
3mwk_A A Heat resistant RNA dependent ATPase                          34.3    4.0   
3mwj_B B Heat resistant RNA dependent ATPase                          34.3    4.0   
3mwl_B B Heat resistant RNA dependent ATPase                          34.3    4.0   
8r08_GA G Probable ATP-dependent RNA helicase DDX23                   35.0    4.3   
5tnu_A A DNA-dependent ATPase XPBII                                   35.0    4.4   
6p4o_C C DNA-dependent ATPase XPBII                                   35.0    4.4   
6p4o_A A DNA-dependent ATPase XPBII                                   35.0    4.4   
6p4o_E E DNA-dependent ATPase XPBII                                   35.0    4.6   
6p4f_C C DNA-dependent ATPase XPBII                                   34.7    4.7   
8dpe_A A ATP-dependent RNA helicase DDX42                             34.7    4.7   
6p4w_C C DNA-dependent ATPase XPBII                                   34.7    4.8   
6p4f_A A DNA-dependent ATPase XPBII                                   34.7    4.8   
6p4w_A A DNA-dependent ATPase XPBII                                   34.7    4.8   
8q7w_F E Probable ATP-dependent RNA helicase DDX23                    35.0    5.0   
2iwh_B B ELONGATION FACTOR 3A                                         35.0    5.0   
7b7d_DC EF Elongation factor 3A                                       35.0    5.0   
5tnu_B B DNA-dependent ATPase XPBII                                   34.7    5.0   
2iw3_B B ELONGATION FACTOR 3A                                         35.0    5.1   
2ix3_B B ELONGATION FACTOR 3                                          35.0    5.1   
2ix3_A A ELONGATION FACTOR 3                                          35.0    5.1   
2iwh_A A ELONGATION FACTOR 3A                                         35.0    5.1   
2ix8_A A ELONGATION FACTOR 3A                                         35.0    5.2   
2iw3_A A ELONGATION FACTOR 3A                                         35.0    5.2   
6uv0_A A Probable ATP-dependent RNA helicase DDX17                    34.7    5.9   
8q7x_F E Probable ATP-dependent RNA helicase DDX23                    34.7    6.0   
8h6j_FA 4U Probable ATP-dependent RNA helicase DDX23                  34.7    6.0   
6qw6_X 5X Probable ATP-dependent RNA helicase DDX23                   34.7    6.3   
6qx9_AA 5X Probable ATP-dependent RNA helicase DDX23                  34.7    6.3   
8i9y_G CE RNA helicase                                                34.3    6.8   
8i9x_G CE RNA helicase                                                34.3    6.8   
8rc0_E D Probable ATP-dependent RNA helicase DDX23                    34.7    6.8   
6yvh_H K Eukaryotic initiation factor 4A-III                          33.1    6.9   
8i9z_G CE RNA helicase                                                34.3    7.1   
8i9p_F CE RNA helicase                                                34.3    7.1   
8i9t_G CE RNA helicase                                                34.3    7.1   
8ia0_G CE RNA helicase                                                34.3    7.1   
8i9w_F CE RNA helicase                                                34.3    7.1   
8i9r_F CE RNA helicase                                                34.3    7.1   
8i9v_G CE RNA helicase                                                34.3    7.1   
8qxd_V G Probable ATP-dependent RNA helicase DDX23                    34.3    7.2   
7evn_E E ATP-dependent RNA helicase DDX42                             34.7    7.3   
8bic_A A methyltransferase Plu4891                                    33.9    7.3   
7pru_B B Putative iron-sulfur protein                                 34.3    7.3   
7pru_A A Putative iron-sulfur protein                                 34.3    7.3   
2hjv_A A ATP-dependent RNA helicase dbpA                              33.1    7.7   
2fwr_B B DNA repair protein RAD25                                     34.3    7.7   
7pqx_B B Putative iron-sulfur protein                                 34.3    7.8   
7psd_A B Putative iron-sulfur protein                                 34.3    7.8   
7pro_B B Putative iron-sulfur protein                                 34.3    7.8   
7pro_A A Putative iron-sulfur protein                                 34.3    7.8   
7pqx_A A Putative iron-sulfur protein                                 34.3    7.8   
7psd_B A Putative iron-sulfur protein                                 34.3    7.8   
4nho_A A Probable ATP-dependent RNA helicase DDX23                    34.3    7.8   
8bic_B B methyltransferase Plu4891                                    33.9    7.9   
7pr1_A A Putative iron-sulfur protein                                 34.3    8.0   
7pr1_B B Putative iron-sulfur protein                                 34.3    8.0   
2fwr_D D DNA repair protein RAD25                                     34.3    8.0   
2fwr_C C DNA repair protein RAD25                                     34.3    8.0   
2hjv_B B ATP-dependent RNA helicase dbpA                              33.1    8.0   
3ear_A A Hera                                                         33.1    8.9   
2zu6_D D Eukaryotic initiation factor 4A-I                            33.9    9.5   


>8dvs_A A Antiviral innate immune response receptor RIG-I
Length=925 Score = 1420 bits (3677), Expect = 0.0, Method: Compositional matrix adjust. Identities = 682/682 (100%), Positives = 682/682 (100%), Gaps = 0/682 (0%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI Sbjct 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI Sbjct 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT Sbjct 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR Sbjct 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL Sbjct 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV Sbjct 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI Sbjct 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN Sbjct 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720 Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI Sbjct 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE Sbjct 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG Sbjct 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 Query 901 VQTLYSKWKDFHFEKIPFDPAE 922 VQTLYSKWKDFHFEKIPFDPAE Sbjct 901 VQTLYSKWKDFHFEKIPFDPAE 922
>7to0_A A Antiviral innate immune response receptor RIG-I
Length=925 Score = 1420 bits (3677), Expect = 0.0, Method: Compositional matrix adjust. Identities = 682/682 (100%), Positives = 682/682 (100%), Gaps = 0/682 (0%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI Sbjct 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI Sbjct 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT Sbjct 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR Sbjct 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL Sbjct 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV Sbjct 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI Sbjct 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN Sbjct 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720 Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI Sbjct 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE Sbjct 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG Sbjct 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 Query 901 VQTLYSKWKDFHFEKIPFDPAE 922 VQTLYSKWKDFHFEKIPFDPAE Sbjct 901 VQTLYSKWKDFHFEKIPFDPAE 922
>7tnz_A A Antiviral innate immune response receptor RIG-I
Length=925 Score = 1417 bits (3669), Expect = 0.0, Method: Compositional matrix adjust. Identities = 680/682 (99%), Positives = 680/682 (99%), Gaps = 0/682 (0%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI Sbjct 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI Sbjct 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT Sbjct 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR Sbjct 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL Sbjct 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV Sbjct 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI Sbjct 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720 LTGRGKTNQNTGMTLPAQKCILDAFK GDHNILIATSVADEGIDIAQCNLVILYEYVGN Sbjct 661 LTGRGKTNQNTGMTLPAQKCILDAFKXXGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720 Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI Sbjct 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE Sbjct 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG Sbjct 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 Query 901 VQTLYSKWKDFHFEKIPFDPAE 922 VQTLYSKWKDFHFEKIPFDPAE Sbjct 901 VQTLYSKWKDFHFEKIPFDPAE 922
>5f9f_I I Probable ATP-dependent RNA helicase DDX58
Length=695 Score = 1402 bits (3630), Expect = 0.0, Method: Compositional matrix adjust. Identities = 674/683 (99%), Positives = 674/683 (99%), Gaps = 0/683 (0%) Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ Sbjct 10 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 69 Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT Sbjct 70 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 129 Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN Sbjct 130 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 189 Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM Sbjct 190 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 249 Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539 RDTESLAKRICKDLE REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF Sbjct 250 RDTESLAKRICKDLEXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 309 Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES Sbjct 310 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 369 Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG Sbjct 370 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 429 Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG Sbjct 430 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 489 Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK Sbjct 490 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 549 Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839 ILHIQTHEKFIRDSQE KPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK Sbjct 550 ILHIQTHEKFIRDSQEXXKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 609 Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT Sbjct 610 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 669 Query 900 GVQTLYSKWKDFHFEKIPFDPAE 922 GVQTLYSKWKDFHFEKIPFDPAE Sbjct 670 GVQTLYSKWKDFHFEKIPFDPAE 692
>5f9f_A A Probable ATP-dependent RNA helicase DDX58
Length=695 Score = 1402 bits (3628), Expect = 0.0, Method: Compositional matrix adjust. Identities = 673/683 (99%), Positives = 673/683 (99%), Gaps = 0/683 (0%) Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ Sbjct 10 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 69 Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT Sbjct 70 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 129 Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN Sbjct 130 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 189 Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM Sbjct 190 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 249 Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539 RDTESLAKRICKDL REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF Sbjct 250 RDTESLAKRICKDLXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 309 Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES Sbjct 310 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 369 Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG Sbjct 370 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 429 Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG Sbjct 430 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 489 Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK Sbjct 490 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 549 Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839 ILHIQTHEKFIRDSQ PKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK Sbjct 550 ILHIQTHEKFIRDSQXXPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 609 Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT Sbjct 610 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 669 Query 900 GVQTLYSKWKDFHFEKIPFDPAE 922 GVQTLYSKWKDFHFEKIPFDPAE Sbjct 670 GVQTLYSKWKDFHFEKIPFDPAE 692
>6kyv_F F Probable ATP-dependent RNA helicase DDX58
Length=684 Score = 1399 bits (3620), Expect = 0.0, Method: Compositional matrix adjust. Identities = 672/677 (99%), Positives = 672/677 (99%), Gaps = 0/677 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP Sbjct 4 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 63 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP Sbjct 64 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 123 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD Sbjct 124 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 183 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD Sbjct 184 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 243 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY Sbjct 244 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 303 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRA DEIEQDLTQRFEEKLQELESVS Sbjct 304 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAXXXDEIEQDLTQRFEEKLQELESVS 363 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL Sbjct 364 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 423 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV Sbjct 424 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 483 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL Sbjct 484 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 543 Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841 HIQTHEKFIRDSQ PKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC Sbjct 544 HIQTHEKFIRDSQXXPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 603 Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV Sbjct 604 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 663 Query 902 QTLYSKWKDFHFEKIPF 918 QTLYSKWKDFHFEKIPF Sbjct 664 QTLYSKWKDFHFEKIPF 680
>6kyv_H H Probable ATP-dependent RNA helicase DDX58
Length=684 Score = 1399 bits (3620), Expect = 0.0, Method: Compositional matrix adjust. Identities = 672/677 (99%), Positives = 672/677 (99%), Gaps = 0/677 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP Sbjct 4 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 63 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP Sbjct 64 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 123 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD Sbjct 124 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 183 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD Sbjct 184 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 243 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY Sbjct 244 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 303 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRA DEIEQDLTQRFEEKLQELESVS Sbjct 304 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAXXXDEIEQDLTQRFEEKLQELESVS 363 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL Sbjct 364 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 423 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV Sbjct 424 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 483 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL Sbjct 484 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 543 Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841 HIQTHEKFIRDSQ PKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC Sbjct 544 HIQTHEKFIRDSQXXPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 603 Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV Sbjct 604 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 663 Query 902 QTLYSKWKDFHFEKIPF 918 QTLYSKWKDFHFEKIPF Sbjct 664 QTLYSKWKDFHFEKIPF 680
>6kyv_B B Probable ATP-dependent RNA helicase DDX58
Length=684 Score = 1399 bits (3620), Expect = 0.0, Method: Compositional matrix adjust. Identities = 672/677 (99%), Positives = 672/677 (99%), Gaps = 0/677 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP Sbjct 4 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 63 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP Sbjct 64 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 123 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD Sbjct 124 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 183 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD Sbjct 184 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 243 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY Sbjct 244 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 303 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRA DEIEQDLTQRFEEKLQELESVS Sbjct 304 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAXXXDEIEQDLTQRFEEKLQELESVS 363 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL Sbjct 364 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 423 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV Sbjct 424 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 483 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL Sbjct 484 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 543 Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841 HIQTHEKFIRDSQ PKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC Sbjct 544 HIQTHEKFIRDSQXXPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 603 Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV Sbjct 604 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 663 Query 902 QTLYSKWKDFHFEKIPF 918 QTLYSKWKDFHFEKIPF Sbjct 664 QTLYSKWKDFHFEKIPF 680
>6kyv_L L Probable ATP-dependent RNA helicase DDX58
Length=684 Score = 1399 bits (3620), Expect = 0.0, Method: Compositional matrix adjust. Identities = 672/677 (99%), Positives = 672/677 (99%), Gaps = 0/677 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP Sbjct 4 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 63 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP Sbjct 64 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 123 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD Sbjct 124 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 183 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD Sbjct 184 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 243 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY Sbjct 244 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 303 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRA DEIEQDLTQRFEEKLQELESVS Sbjct 304 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAXXXDEIEQDLTQRFEEKLQELESVS 363 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL Sbjct 364 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 423 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV Sbjct 424 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 483 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL Sbjct 484 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 543 Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841 HIQTHEKFIRDSQ PKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC Sbjct 544 HIQTHEKFIRDSQXXPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 603 Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV Sbjct 604 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 663 Query 902 QTLYSKWKDFHFEKIPF 918 QTLYSKWKDFHFEKIPF Sbjct 664 QTLYSKWKDFHFEKIPF 680
>6kyv_J J Probable ATP-dependent RNA helicase DDX58
Length=684 Score = 1399 bits (3620), Expect = 0.0, Method: Compositional matrix adjust. Identities = 672/677 (99%), Positives = 672/677 (99%), Gaps = 0/677 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP Sbjct 4 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 63 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP Sbjct 64 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 123 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD Sbjct 124 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 183 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD Sbjct 184 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 243 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY Sbjct 244 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 303 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRA DEIEQDLTQRFEEKLQELESVS Sbjct 304 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAXXXDEIEQDLTQRFEEKLQELESVS 363 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL Sbjct 364 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 423 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV Sbjct 424 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 483 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL Sbjct 484 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 543 Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841 HIQTHEKFIRDSQ PKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC Sbjct 544 HIQTHEKFIRDSQXXPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 603 Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV Sbjct 604 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 663 Query 902 QTLYSKWKDFHFEKIPF 918 QTLYSKWKDFHFEKIPF Sbjct 664 QTLYSKWKDFHFEKIPF 680
>6kyv_D D Probable ATP-dependent RNA helicase DDX58
Length=684 Score = 1399 bits (3620), Expect = 0.0, Method: Compositional matrix adjust. Identities = 672/677 (99%), Positives = 672/677 (99%), Gaps = 0/677 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP Sbjct 4 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 63 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP Sbjct 64 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 123 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD Sbjct 124 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 183 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD Sbjct 184 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 243 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY Sbjct 244 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 303 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRA DEIEQDLTQRFEEKLQELESVS Sbjct 304 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAXXXDEIEQDLTQRFEEKLQELESVS 363 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL Sbjct 364 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 423 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV Sbjct 424 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 483 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL Sbjct 484 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 543 Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841 HIQTHEKFIRDSQ PKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC Sbjct 544 HIQTHEKFIRDSQXXPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 603 Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV Sbjct 604 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 663 Query 902 QTLYSKWKDFHFEKIPF 918 QTLYSKWKDFHFEKIPF Sbjct 664 QTLYSKWKDFHFEKIPF 680
>5f9f_E E Probable ATP-dependent RNA helicase DDX58
Length=695 Score = 1398 bits (3619), Expect = 0.0, Method: Compositional matrix adjust. Identities = 672/681 (99%), Positives = 672/681 (99%), Gaps = 0/681 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP Sbjct 12 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 71 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP Sbjct 72 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 131 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD Sbjct 132 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 191 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD Sbjct 192 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 251 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TESLAKRICKD REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY Sbjct 252 TESLAKRICKDXXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 311 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS Sbjct 312 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 371 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL Sbjct 372 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 431 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV Sbjct 432 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 491 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL Sbjct 492 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 551 Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC Sbjct 552 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 611 Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV Sbjct 612 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 671 Query 902 QTLYSKWKDFHFEKIPFDPAE 922 QTLYSKWKDFHFEKIPFDPAE Sbjct 672 QTLYSKWKDFHFEKIPFDPAE 692
>5f9f_K K Probable ATP-dependent RNA helicase DDX58
Length=695 Score = 1397 bits (3617), Expect = 0.0, Method: Compositional matrix adjust. Identities = 672/682 (99%), Positives = 672/682 (99%), Gaps = 0/682 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP Sbjct 12 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 71 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP Sbjct 72 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 131 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD Sbjct 132 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 191 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD Sbjct 192 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 251 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TESLAKRICKDL REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY Sbjct 252 TESLAKRICKDLXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 311 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS Sbjct 312 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 371 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL Sbjct 372 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 431 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV Sbjct 432 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 491 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL Sbjct 492 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 551 Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841 HIQTHEKFIRDSQEK PVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC Sbjct 552 HIQTHEKFIRDSQEKXXPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 611 Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV Sbjct 612 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 671 Query 902 QTLYSKWKDFHFEKIPFDPAEM 923 QTLYSKWKDFHFEKIPFDPAEM Sbjct 672 QTLYSKWKDFHFEKIPFDPAEM 693
>5f9f_G G Probable ATP-dependent RNA helicase DDX58
Length=695 Score = 1391 bits (3601), Expect = 0.0, Method: Compositional matrix adjust. Identities = 669/683 (98%), Positives = 669/683 (98%), Gaps = 0/683 (0%) Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ Sbjct 10 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 69 Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT Sbjct 70 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 129 Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN Sbjct 130 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 189 Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM Sbjct 190 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 249 Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539 RDTESLAKRICK REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF Sbjct 250 RDTESLAKRICKXXXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 309 Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES Sbjct 310 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 369 Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG Sbjct 370 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 429 Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG Sbjct 430 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 489 Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK Sbjct 490 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 549 Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839 ILHIQTHEKFIRDSQ PVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK Sbjct 550 ILHIQTHEKFIRDSQXXXXPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 609 Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT Sbjct 610 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 669 Query 900 GVQTLYSKWKDFHFEKIPFDPAE 922 GVQTLYSKWKDFHFEKIPFDPAE Sbjct 670 GVQTLYSKWKDFHFEKIPFDPAE 692
>7to2_A A Antiviral innate immune response receptor RIG-I
Length=925 Score = 1391 bits (3601), Expect = 0.0, Method: Compositional matrix adjust. Identities = 670/682 (98%), Positives = 670/682 (98%), Gaps = 0/682 (0%) Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ Sbjct 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299 Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT Sbjct 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN Sbjct 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM Sbjct 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479 Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF Sbjct 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539 Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES Sbjct 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599 Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG Sbjct 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659 Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG Sbjct 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719 Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK Sbjct 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779 Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK Sbjct 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839 Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899 ECFVSR KRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT Sbjct 840 ECFVSRXXXXXXXXXXXXKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899 Query 900 GVQTLYSKWKDFHFEKIPFDPA 921 GVQTLYSKWKDFHFEKIPFDPA Sbjct 900 GVQTLYSKWKDFHFEKIPFDPA 921
>5f9f_C C Probable ATP-dependent RNA helicase DDX58
Length=695 Score = 1389 bits (3596), Expect = 0.0, Method: Compositional matrix adjust. Identities = 668/682 (98%), Positives = 668/682 (98%), Gaps = 0/682 (0%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI Sbjct 11 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 70 Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI Sbjct 71 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 130 Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT Sbjct 131 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 190 Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR Sbjct 191 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 250 Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 DTESLAKRICKD EFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL Sbjct 251 DTESLAKRICKDXXXXXXXXXXEFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 310 Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV Sbjct 311 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 370 Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI Sbjct 371 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 430 Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN Sbjct 431 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 490 Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI Sbjct 491 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 550 Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 LHIQTHEKFIRDSQ PVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE Sbjct 551 LHIQTHEKFIRDSQXXXXPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 610 Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG Sbjct 611 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 670 Query 901 VQTLYSKWKDFHFEKIPFDPAE 922 VQTLYSKWKDFHFEKIPFDPAE Sbjct 671 VQTLYSKWKDFHFEKIPFDPAE 692
>8dvu_A A Antiviral innate immune response receptor RIG-I
Length=925 Score = 1389 bits (3595), Expect = 0.0, Method: Compositional matrix adjust. Identities = 669/682 (98%), Positives = 669/682 (98%), Gaps = 0/682 (0%) Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ Sbjct 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299 Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT Sbjct 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN Sbjct 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM Sbjct 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479 Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF Sbjct 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539 Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES Sbjct 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599 Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG Sbjct 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659 Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG Sbjct 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719 Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK Sbjct 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779 Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK Sbjct 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839 Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899 ECFVSR RAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT Sbjct 840 ECFVSRXXXXXXXXXXXXXRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899 Query 900 GVQTLYSKWKDFHFEKIPFDPA 921 GVQTLYSKWKDFHFEKIPFDPA Sbjct 900 GVQTLYSKWKDFHFEKIPFDPA 921
>7tny_A A Antiviral innate immune response receptor RIG-I
Length=925 Score = 1382 bits (3578), Expect = 0.0, Method: Compositional matrix adjust. Identities = 666/682 (98%), Positives = 666/682 (98%), Gaps = 0/682 (0%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI Sbjct 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI Sbjct 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT Sbjct 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR Sbjct 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL Sbjct 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV Sbjct 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI Sbjct 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720 LTGRG MTLPAQKCILDAFK DHNILIATSV IAQCNLVILYEYVGN Sbjct 661 LTGRGXXXXXXXMTLPAQKCILDAFKXXXDHNILIATSVXXXXXXIAQCNLVILYEYVGN 720 Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI Sbjct 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE Sbjct 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG Sbjct 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 Query 901 VQTLYSKWKDFHFEKIPFDPAE 922 VQTLYSKWKDFHFEKIPFDPAE Sbjct 901 VQTLYSKWKDFHFEKIPFDPAE 922
>7jl1_A A Antiviral innate immune response receptor RIG-I
Length=722 Score = 1358 bits (3515), Expect = 0.0, Method: Compositional matrix adjust. Identities = 656/680 (96%), Positives = 656/680 (96%), Gaps = 0/680 (0%) Query 239 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN 298 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN Sbjct 36 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN 95 Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG Sbjct 96 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 155 Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGG GPLPQVIGLTASVGVGDAK Sbjct 156 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGXXGPLPQVIGLTASVGVGDAK 215 Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 478 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL Sbjct 216 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 275 Query 479 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL 538 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMP KDEESRICKAL Sbjct 276 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPXKDEESRICKAL 335 Query 539 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE 598 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNV EIEQDLTQRFEEKLQELE Sbjct 336 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVXXXXXXEIEQDLTQRFEEKLQELE 395 Query 599 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP 658 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP Sbjct 396 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP 455 Query 659 GILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYV 718 GILTGRGKTNQNTGMTLPAQKCILDAFK GDHNILIATSVADEGIDIAQCNLVILYEYV Sbjct 456 GILTGRGKTNQNTGMTLPAQKCILDAFKXXGDHNILIATSVADEGIDIAQCNLVILYEYV 515 Query 719 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE 778 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE Sbjct 516 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE 575 Query 779 KILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF 838 KILHIQTHEKFIRDSQEK ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF Sbjct 576 KILHIQTHEKFIRDSQEKXXXXXXXENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF 635 Query 839 KECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA 898 KECFVSRPHPKPK KRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA Sbjct 636 KECFVSRPHPKPKXXXXXXKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA 695 Query 899 TGVQTLYSKWKDFHFEKIPF 918 TGVQTLYSKWKDFHFEKIPF Sbjct 696 TGVQTLYSKWKDFHFEKIPF 715
>5f9h_G G Probable ATP-dependent RNA helicase DDX58
Length=695 Score = 1350 bits (3494), Expect = 0.0, Method: Compositional matrix adjust. Identities = 653/683 (96%), Positives = 653/683 (96%), Gaps = 0/683 (0%) Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ Sbjct 10 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 69 Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT Sbjct 70 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 129 Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN Sbjct 130 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 189 Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM Sbjct 190 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 249 Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539 RDTESLAKRICK REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF Sbjct 250 RDTESLAKRICKXXXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 309 Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES Sbjct 310 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 369 Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG Sbjct 370 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 429 Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719 ILTGR ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG Sbjct 430 ILTGRXXXXXXXXXXXXXXXXILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 489 Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK Sbjct 490 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 549 Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839 ILHIQTHEKFIRDS KPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK Sbjct 550 ILHIQTHEKFIRDSXXXXKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 609 Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT Sbjct 610 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 669 Query 900 GVQTLYSKWKDFHFEKIPFDPAE 922 GVQTLYSKWKDFHFEKIPFDPAE Sbjct 670 GVQTLYSKWKDFHFEKIPFDPAE 692
>5f98_A A Probable ATP-dependent RNA helicase DDX58
Length=695 Score = 1343 bits (3477), Expect = 0.0, Method: Compositional matrix adjust. Identities = 650/683 (95%), Positives = 650/683 (95%), Gaps = 0/683 (0%) Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ Sbjct 10 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 69 Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT Sbjct 70 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 129 Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN Sbjct 130 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 189 Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM Sbjct 190 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 249 Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539 RDTESLAKRICKDL REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF Sbjct 250 RDTESLAKRICKDLXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 309 Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES Sbjct 310 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 369 Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG Sbjct 370 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 429 Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719 ILTGR DHNILIATSVADEGIDIAQCNLVILYEYVG Sbjct 430 ILTGRXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVADEGIDIAQCNLVILYEYVG 489 Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK Sbjct 490 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 549 Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK Sbjct 550 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 609 Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT Sbjct 610 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 669 Query 900 GVQTLYSKWKDFHFEKIPFDPAE 922 GVQTLYSKWKDFHFEKIPFDPAE Sbjct 670 GVQTLYSKWKDFHFEKIPFDPAE 692
>7jl3_A A Antiviral innate immune response receptor RIG-I
Length=722 Score = 1343 bits (3476), Expect = 0.0, Method: Compositional matrix adjust. Identities = 650/680 (96%), Positives = 650/680 (96%), Gaps = 0/680 (0%) Query 239 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN 298 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN Sbjct 36 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN 95 Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG Sbjct 96 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 155 Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGG GPLPQVIGLTASVGVGDAK Sbjct 156 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGXXGPLPQVIGLTASVGVGDAK 215 Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 478 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL Sbjct 216 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 275 Query 479 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL 538 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMP KDEESRICKAL Sbjct 276 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPXKDEESRICKAL 335 Query 539 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE 598 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNV EIEQDLTQRFEEKLQELE Sbjct 336 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVXXXXXXEIEQDLTQRFEEKLQELE 395 Query 599 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP 658 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP Sbjct 396 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP 455 Query 659 GILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYV 718 GILTGRG GMTLPAQKCILDAFK GDHNILIATSVADEGIDIAQCNLVILYEYV Sbjct 456 GILTGRGXXXXXXGMTLPAQKCILDAFKXXGDHNILIATSVADEGIDIAQCNLVILYEYV 515 Query 719 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE 778 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE Sbjct 516 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE 575 Query 779 KILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF 838 KILHIQTHEKFIRDSQEK ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF Sbjct 576 KILHIQTHEKFIRDSQEKXXXXXXXENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF 635 Query 839 KECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA 898 KECFVSRPHPKPK KRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA Sbjct 636 KECFVSRPHPKPKXXXXXXKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA 695 Query 899 TGVQTLYSKWKDFHFEKIPF 918 TGVQTLYSKWKDFHFEKIPF Sbjct 696 TGVQTLYSKWKDFHFEKIPF 715
>7jl3_C C Antiviral innate immune response receptor RIG-I
Length=722 Score = 1343 bits (3476), Expect = 0.0, Method: Compositional matrix adjust. Identities = 650/680 (96%), Positives = 650/680 (96%), Gaps = 0/680 (0%) Query 239 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN 298 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN Sbjct 36 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN 95 Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG Sbjct 96 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 155 Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGG GPLPQVIGLTASVGVGDAK Sbjct 156 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGXXGPLPQVIGLTASVGVGDAK 215 Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 478 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL Sbjct 216 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 275 Query 479 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL 538 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMP KDEESRICKAL Sbjct 276 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPXKDEESRICKAL 335 Query 539 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE 598 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNV EIEQDLTQRFEEKLQELE Sbjct 336 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVXXXXXXEIEQDLTQRFEEKLQELE 395 Query 599 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP 658 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP Sbjct 396 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP 455 Query 659 GILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYV 718 GILTGRG GMTLPAQKCILDAFK GDHNILIATSVADEGIDIAQCNLVILYEYV Sbjct 456 GILTGRGXXXXXXGMTLPAQKCILDAFKXXGDHNILIATSVADEGIDIAQCNLVILYEYV 515 Query 719 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE 778 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE Sbjct 516 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE 575 Query 779 KILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF 838 KILHIQTHEKFIRDSQEK ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF Sbjct 576 KILHIQTHEKFIRDSQEKXXXXXXXENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF 635 Query 839 KECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA 898 KECFVSRPHPKPK KRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA Sbjct 636 KECFVSRPHPKPKXXXXXXKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA 695 Query 899 TGVQTLYSKWKDFHFEKIPF 918 TGVQTLYSKWKDFHFEKIPF Sbjct 696 TGVQTLYSKWKDFHFEKIPF 715
>7jl3_E E Antiviral innate immune response receptor RIG-I
Length=722 Score = 1343 bits (3476), Expect = 0.0, Method: Compositional matrix adjust. Identities = 650/680 (96%), Positives = 650/680 (96%), Gaps = 0/680 (0%) Query 239 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN 298 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN Sbjct 36 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN 95 Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG Sbjct 96 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 155 Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGG GPLPQVIGLTASVGVGDAK Sbjct 156 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGXXGPLPQVIGLTASVGVGDAK 215 Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 478 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL Sbjct 216 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 275 Query 479 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL 538 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMP KDEESRICKAL Sbjct 276 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPXKDEESRICKAL 335 Query 539 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE 598 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNV EIEQDLTQRFEEKLQELE Sbjct 336 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVXXXXXXEIEQDLTQRFEEKLQELE 395 Query 599 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP 658 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP Sbjct 396 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP 455 Query 659 GILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYV 718 GILTGRG GMTLPAQKCILDAFK GDHNILIATSVADEGIDIAQCNLVILYEYV Sbjct 456 GILTGRGXXXXXXGMTLPAQKCILDAFKXXGDHNILIATSVADEGIDIAQCNLVILYEYV 515 Query 719 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE 778 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE Sbjct 516 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE 575 Query 779 KILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF 838 KILHIQTHEKFIRDSQEK ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF Sbjct 576 KILHIQTHEKFIRDSQEKXXXXXXXENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF 635 Query 839 KECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA 898 KECFVSRPHPKPK KRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA Sbjct 636 KECFVSRPHPKPKXXXXXXKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA 695 Query 899 TGVQTLYSKWKDFHFEKIPF 918 TGVQTLYSKWKDFHFEKIPF Sbjct 696 TGVQTLYSKWKDFHFEKIPF 715
>6gpg_C A Probable ATP-dependent RNA helicase DDX58
Length=714 Score = 1341 bits (3471), Expect = 0.0, Method: Compositional matrix adjust. Identities = 650/684 (95%), Positives = 650/684 (95%), Gaps = 0/684 (0%) Query 239 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN 298 SPFKPRNYQLELALPAMKGKNTIICAPTG GKTFVSLLICEHHLKKFPQGQKGKVVFFAN Sbjct 28 SPFKPRNYQLELALPAMKGKNTIICAPTGFGKTFVSLLICEHHLKKFPQGQKGKVVFFAN 87 Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG Sbjct 88 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 147 Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK Sbjct 148 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 207 Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 478 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL Sbjct 208 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 267 Query 479 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL 538 MRDTESLAKRICKDL NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL Sbjct 268 MRDTESLAKRICKDLXXXXXXXNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL 327 Query 539 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE 598 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE Sbjct 328 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE 387 Query 599 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP 658 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP Sbjct 388 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP 447 Query 659 GILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYV 718 GILTG DHNILIATSVADEGIDIAQCNLVILYEYV Sbjct 448 GILTGXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVADEGIDIAQCNLVILYEYV 507 Query 719 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE 778 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE Sbjct 508 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE 567 Query 779 KILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF 838 KILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF Sbjct 568 KILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAF 627 Query 839 KECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA 898 KECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA Sbjct 628 KECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIA 687 Query 899 TGVQTLYSKWKDFHFEKIPFDPAE 922 TGVQTLYSKWKDFHFEKIPFDPAE Sbjct 688 TGVQTLYSKWKDFHFEKIPFDPAE 711
>5f98_C C Probable ATP-dependent RNA helicase DDX58
Length=695 Score = 1340 bits (3467), Expect = 0.0, Method: Compositional matrix adjust. Identities = 648/683 (95%), Positives = 648/683 (95%), Gaps = 0/683 (0%) Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ Sbjct 10 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 69 Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT Sbjct 70 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 129 Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN Sbjct 130 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 189 Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRI DKFKYIIAQLM Sbjct 190 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIXDKFKYIIAQLM 249 Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539 RDTESLAKRICKDL REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF Sbjct 250 RDTESLAKRICKDLXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 309 Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES Sbjct 310 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 369 Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG Sbjct 370 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 429 Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719 ILTG DHNILIATSVADEGIDIAQCNLVILYEYVG Sbjct 430 ILTGXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVADEGIDIAQCNLVILYEYVG 489 Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK Sbjct 490 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 549 Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK Sbjct 550 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 609 Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT Sbjct 610 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 669 Query 900 GVQTLYSKWKDFHFEKIPFDPAE 922 GVQTLYSKWKDFHFEKIPFDPAE Sbjct 670 GVQTLYSKWKDFHFEKIPFDPAE 692
>5f98_G G Probable ATP-dependent RNA helicase DDX58
Length=695 Score = 1337 bits (3460), Expect = 0.0, Method: Compositional matrix adjust. Identities = 647/683 (95%), Positives = 647/683 (95%), Gaps = 0/683 (0%) Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ Sbjct 10 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 69 Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT Sbjct 70 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 129 Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN Sbjct 130 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 189 Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM Sbjct 190 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 249 Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539 RDTESLAKRICKDL REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF Sbjct 250 RDTESLAKRICKDLXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 309 Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES Sbjct 310 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 369 Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG Sbjct 370 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 429 Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719 ILTGR DHNILIATSVADEGIDIAQCNLVILYEYVG Sbjct 430 ILTGRXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVADEGIDIAQCNLVILYEYVG 489 Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK Sbjct 490 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 549 Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839 ILHIQTHEKFIRDSQE PVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK Sbjct 550 ILHIQTHEKFIRDSQEXXXPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 609 Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT Sbjct 610 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 669 Query 900 GVQTLYSKWKDFHFEKIPFDPAE 922 GVQTLYSKWKDFHFEKIPFDPAE Sbjct 670 GVQTLYSKWKDFHFEKIPFDPAE 692
>5f98_I I Probable ATP-dependent RNA helicase DDX58
Length=695 Score = 1337 bits (3459), Expect = 0.0, Method: Compositional matrix adjust. Identities = 647/683 (95%), Positives = 647/683 (95%), Gaps = 0/683 (0%) Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ Sbjct 10 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 69 Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT Sbjct 70 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 129 Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN Sbjct 130 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 189 Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM Sbjct 190 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 249 Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539 RDTESLAKRICKDLEN NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF Sbjct 250 RDTESLAKRICKDLENXXXXXNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 309 Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES Sbjct 310 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 369 Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG Sbjct 370 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 429 Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719 ILT DHNILIATSVADEGIDIAQCNLVILYEYVG Sbjct 430 ILTXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVADEGIDIAQCNLVILYEYVG 489 Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK Sbjct 490 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 549 Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839 ILHIQTHEKFIRDSQ PVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK Sbjct 550 ILHIQTHEKFIRDSQXXXXPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 609 Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT Sbjct 610 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 669 Query 900 GVQTLYSKWKDFHFEKIPFDPAE 922 GVQTLYSKWKDFHFEKIPFDPAE Sbjct 670 GVQTLYSKWKDFHFEKIPFDPAE 692
>5f9h_C C Probable ATP-dependent RNA helicase DDX58
Length=695 Score = 1336 bits (3457), Expect = 0.0, Method: Compositional matrix adjust. Identities = 647/682 (95%), Positives = 647/682 (95%), Gaps = 0/682 (0%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI Sbjct 11 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 70 Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI Sbjct 71 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 130 Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT Sbjct 131 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 190 Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR Sbjct 191 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 250 Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 DTESLAKRICKD REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL Sbjct 251 DTESLAKRICKDXXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 310 Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV Sbjct 311 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 370 Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI Sbjct 371 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 430 Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720 LTGRGK ASGDHNILIATSVADEGIDIAQCNLVILYEYVGN Sbjct 431 LTGRGKXXXXXXXXXXXXXXXXXXXXASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 490 Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI Sbjct 491 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 550 Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 LHIQTHEKFIRDS VPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE Sbjct 551 LHIQTHEKFIRDSXXXXXXVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 610 Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG Sbjct 611 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 670 Query 901 VQTLYSKWKDFHFEKIPFDPAE 922 VQTLYSKWKDFHFEKIPFDPAE Sbjct 671 VQTLYSKWKDFHFEKIPFDPAE 692
>7tnx_A A Antiviral innate immune response receptor RIG-I
Length=925 Score = 1333 bits (3451), Expect = 0.0, Method: Compositional matrix adjust. Identities = 647/683 (95%), Positives = 647/683 (95%), Gaps = 0/683 (0%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI Sbjct 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI Sbjct 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT Sbjct 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR Sbjct 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL Sbjct 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV Sbjct 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI Sbjct 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720 LT DHNILIATSV IAQCNLVILYEYV Sbjct 661 LTXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXIAQCNLVILYEYVXX 720 Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI Sbjct 721 XIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE Sbjct 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG Sbjct 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 Query 901 VQTLYSKWKDFHFEKIPFDPAEM 923 VQTLYSKWKDFHFEKIPFDPAEM Sbjct 901 VQTLYSKWKDFHFEKIPFDPAEM 923
>8g7v_A A Antiviral innate immune response receptor RIG-I
Length=925 Score = 1333 bits (3451), Expect = 0.0, Method: Compositional matrix adjust. Identities = 647/683 (95%), Positives = 647/683 (95%), Gaps = 0/683 (0%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI Sbjct 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI Sbjct 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT Sbjct 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR Sbjct 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL Sbjct 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV Sbjct 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI Sbjct 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720 LT DHNILIATSV IAQCNLVILYEYV Sbjct 661 LTXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXIAQCNLVILYEYVXX 720 Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI Sbjct 721 XIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE Sbjct 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG Sbjct 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 Query 901 VQTLYSKWKDFHFEKIPFDPAEM 923 VQTLYSKWKDFHFEKIPFDPAEM Sbjct 901 VQTLYSKWKDFHFEKIPFDPAEM 923
>8g7u_A A Antiviral innate immune response receptor RIG-I
Length=925 Score = 1333 bits (3451), Expect = 0.0, Method: Compositional matrix adjust. Identities = 647/683 (95%), Positives = 647/683 (95%), Gaps = 0/683 (0%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI Sbjct 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI Sbjct 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT Sbjct 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR Sbjct 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL Sbjct 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV Sbjct 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI Sbjct 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720 LT DHNILIATSV IAQCNLVILYEYV Sbjct 661 LTXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXIAQCNLVILYEYVXX 720 Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI Sbjct 721 XIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE Sbjct 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG Sbjct 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 Query 901 VQTLYSKWKDFHFEKIPFDPAEM 923 VQTLYSKWKDFHFEKIPFDPAEM Sbjct 901 VQTLYSKWKDFHFEKIPFDPAEM 923
>8g7t_A A Antiviral innate immune response receptor RIG-I
Length=925 Score = 1333 bits (3451), Expect = 0.0, Method: Compositional matrix adjust. Identities = 647/683 (95%), Positives = 647/683 (95%), Gaps = 0/683 (0%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI Sbjct 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI Sbjct 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT Sbjct 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR Sbjct 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL Sbjct 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV Sbjct 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI Sbjct 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720 LT DHNILIATSV IAQCNLVILYEYV Sbjct 661 LTXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXIAQCNLVILYEYVXX 720 Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI Sbjct 721 XIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE Sbjct 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG Sbjct 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 Query 901 VQTLYSKWKDFHFEKIPFDPAEM 923 VQTLYSKWKDFHFEKIPFDPAEM Sbjct 901 VQTLYSKWKDFHFEKIPFDPAEM 923
>5f9h_A A Probable ATP-dependent RNA helicase DDX58
Length=695 Score = 1333 bits (3450), Expect = 0.0, Method: Compositional matrix adjust. Identities = 646/682 (95%), Positives = 646/682 (95%), Gaps = 0/682 (0%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI Sbjct 11 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 70 Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI Sbjct 71 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 130 Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT Sbjct 131 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 190 Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR Sbjct 191 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 250 Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 DTESLAKRICKDL REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL Sbjct 251 DTESLAKRICKDLXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 310 Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAA FDEIEQDLTQRFEEKLQELESV Sbjct 311 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAXFDEIEQDLTQRFEEKLQELESV 370 Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI Sbjct 371 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 430 Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720 LTGR DHNILIATSVADEGIDIAQCNLVILYEYVGN Sbjct 431 LTGRXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVADEGIDIAQCNLVILYEYVGN 490 Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI Sbjct 491 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 550 Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 LHIQTHEKFIRDSQ PKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE Sbjct 551 LHIQTHEKFIRDSQXXPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 610 Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG Sbjct 611 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 670 Query 901 VQTLYSKWKDFHFEKIPFDPAE 922 VQTLYSKWKDFHFEKIPFDPAE Sbjct 671 VQTLYSKWKDFHFEKIPFDPAE 692
>5f9h_I I Probable ATP-dependent RNA helicase DDX58
Length=695 Score = 1330 bits (3443), Expect = 0.0, Method: Compositional matrix adjust. Identities = 644/684 (94%), Positives = 644/684 (94%), Gaps = 0/684 (0%) Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ Sbjct 10 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 69 Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT Sbjct 70 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 129 Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGG GPLPQVIGLTASVGVGDAKN Sbjct 130 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGXXGPLPQVIGLTASVGVGDAKN 189 Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRI DKFKYIIAQLM Sbjct 190 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIXDKFKYIIAQLM 249 Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539 RDTESLAKRICKD EFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF Sbjct 250 RDTESLAKRICKDXXXXXXXXXXEFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 309 Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAA FDEIEQDLTQRFEEKLQELES Sbjct 310 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAXFDEIEQDLTQRFEEKLQELES 369 Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG Sbjct 370 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 429 Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719 ILTGRG GDHNILIATSVADEGIDIAQCNLVILYEYVG Sbjct 430 ILTGRGXXXXXXXXXXXXXXXXXXXXXXXGDHNILIATSVADEGIDIAQCNLVILYEYVG 489 Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK Sbjct 490 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 549 Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839 ILHIQTHEKFIRDSQ KPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK Sbjct 550 ILHIQTHEKFIRDSQXXXKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 609 Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT Sbjct 610 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 669 Query 900 GVQTLYSKWKDFHFEKIPFDPAEM 923 GVQTLYSKWKDFHFEKIPFDPAEM Sbjct 670 GVQTLYSKWKDFHFEKIPFDPAEM 693
>5f98_K K Probable ATP-dependent RNA helicase DDX58
Length=695 Score = 1329 bits (3439), Expect = 0.0, Method: Compositional matrix adjust. Identities = 644/682 (94%), Positives = 644/682 (94%), Gaps = 0/682 (0%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI Sbjct 11 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 70 Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI Sbjct 71 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 130 Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT Sbjct 131 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 190 Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR Sbjct 191 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 250 Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 DTESLAKRICKDL NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL Sbjct 251 DTESLAKRICKDLXXXXXXXNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 310 Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVR EIEQDLTQRFEEKLQELESV Sbjct 311 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRXXXXXEIEQDLTQRFEEKLQELESV 370 Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI Sbjct 371 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 430 Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720 LTGR DHNILIATSVADEGIDIAQCNLVILYEYVGN Sbjct 431 LTGRXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVADEGIDIAQCNLVILYEYVGN 490 Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI Sbjct 491 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 550 Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 LHIQTHEKFIRDSQEKP PVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE Sbjct 551 LHIQTHEKFIRDSQEKPXPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 610 Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG Sbjct 611 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 670 Query 901 VQTLYSKWKDFHFEKIPFDPAE 922 VQTLYSKWKDFHFEKIPFDPAE Sbjct 671 VQTLYSKWKDFHFEKIPFDPAE 692
>5e3h_A A Probable ATP-dependent RNA helicase DDX58
Length=695 Score = 1325 bits (3428), Expect = 0.0, Method: Compositional matrix adjust. Identities = 642/682 (94%), Positives = 642/682 (94%), Gaps = 0/682 (0%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI Sbjct 11 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 70 Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI Sbjct 71 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 130 Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT Sbjct 131 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 190 Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR Sbjct 191 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 250 Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 DTESLAKRICKDLE FGTQKYEQWIVTVQKACMVF DKDEESRICKALFL Sbjct 251 DTESLAKRICKDLEXXXXXXXXXFGTQKYEQWIVTVQKACMVFXXXDKDEESRICKALFL 310 Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRA EIEQDLTQRFEEKLQELESV Sbjct 311 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAXXXXEIEQDLTQRFEEKLQELESV 370 Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI Sbjct 371 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 430 Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720 LTGRG TGMTLPAQKCILDAFK DHNILIATSVADEGIDIAQCNLVILYEYVGN Sbjct 431 LTGRGXXXXXTGMTLPAQKCILDAFKXXXDHNILIATSVADEGIDIAQCNLVILYEYVGN 490 Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI Sbjct 491 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 550 Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 LHIQTHEKFIRDSQE VPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE Sbjct 551 LHIQTHEKFIRDSQEXXXXVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 610 Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 CFVSRPHPKPKQFSSFEKRAKIFCAR CSHDWGIHVKYKTFEIPVIKIESF Sbjct 611 CFVSRPHPKPKQFSSFEKRAKIFCARXXCSHDWGIHVKYKTFEIPVIKIESFXXXXXXXX 670 Query 901 VQTLYSKWKDFHFEKIPFDPAE 922 TLYSKWKDFHFEKIPFDPAE Sbjct 671 XXTLYSKWKDFHFEKIPFDPAE 692
>5f98_E E Probable ATP-dependent RNA helicase DDX58
Length=695 Score = 1321 bits (3418), Expect = 0.0, Method: Compositional matrix adjust. Identities = 641/681 (94%), Positives = 641/681 (94%), Gaps = 0/681 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP Sbjct 12 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 71 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP Sbjct 72 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 131 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD Sbjct 132 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 191 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRI DKFKYIIAQLMRD Sbjct 192 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIXDKFKYIIAQLMRD 251 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TESLAKRICK REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY Sbjct 252 TESLAKRICKXXXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 311 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRA FDEIEQDLTQRFEEKLQELESVS Sbjct 312 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAXXFDEIEQDLTQRFEEKLQELESVS 371 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL Sbjct 372 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 431 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 T DHNILIATSVADEGIDIAQCNLVILYEYVGNV Sbjct 432 TXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVADEGIDIAQCNLVILYEYVGNV 491 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL Sbjct 492 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 551 Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC Sbjct 552 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 611 Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV Sbjct 612 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 671 Query 902 QTLYSKWKDFHFEKIPFDPAE 922 QTLYSKWKDFHFEKIPFDPAE Sbjct 672 QTLYSKWKDFHFEKIPFDPAE 692
>5f9h_E E Probable ATP-dependent RNA helicase DDX58
Length=695 Score = 1313 bits (3398), Expect = 0.0, Method: Compositional matrix adjust. Identities = 638/681 (94%), Positives = 638/681 (94%), Gaps = 0/681 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP Sbjct 12 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 71 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP Sbjct 72 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 131 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD Sbjct 132 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 191 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRI DKFKYIIAQLMRD Sbjct 192 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIXDKFKYIIAQLMRD 251 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TESLAKRIC REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY Sbjct 252 TESLAKRICXXXXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 311 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 TSHLRKYNDALIISEHARMKDALDYLKDFFSNV FDEIEQDLTQRFEEKLQELESVS Sbjct 312 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVXXXXFDEIEQDLTQRFEEKLQELESVS 371 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL Sbjct 372 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 431 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 TG GDHNILIATSVADEGIDIAQCNLVILYEYVGNV Sbjct 432 TGXXXXXXXXXXXXXXXXXXXXXXXXXGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 491 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL Sbjct 492 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 551 Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841 HIQTHEKFIRDSQE PKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC Sbjct 552 HIQTHEKFIRDSQEXPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 611 Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT V Sbjct 612 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATXV 671 Query 902 QTLYSKWKDFHFEKIPFDPAE 922 QTLYSKWKDFHFEKIPFDPAE Sbjct 672 QTLYSKWKDFHFEKIPFDPAE 692
>5f9h_K K Probable ATP-dependent RNA helicase DDX58
Length=695 Score = 1310 bits (3390), Expect = 0.0, Method: Compositional matrix adjust. Identities = 637/681 (94%), Positives = 637/681 (94%), Gaps = 0/681 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP Sbjct 12 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 71 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP Sbjct 72 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 131 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD Sbjct 132 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 191 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRI DKFKYIIAQLMRD Sbjct 192 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIXDKFKYIIAQLMRD 251 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TESLAKRI REFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY Sbjct 252 TESLAKRIXXXXXXXXXXXXREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 311 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAA DEIEQDLTQRFEEKLQELESVS Sbjct 312 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAXXDEIEQDLTQRFEEKLQELESVS 371 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL Sbjct 372 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 431 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 TG DHNILIATSVADEGIDIAQCNLVILYEYVGNV Sbjct 432 TGXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVADEGIDIAQCNLVILYEYVGNV 491 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL Sbjct 492 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 551 Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841 HIQTHEKFIRDSQ KPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC Sbjct 552 HIQTHEKFIRDSQXXXKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 611 Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV Sbjct 612 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 671 Query 902 QTLYSKWKDFHFEKIPFDPAE 922 QTLYSKWKDFHFEKIPFDPAE Sbjct 672 QTLYSKWKDFHFEKIPFDPAE 692
>8sd0_A A Antiviral innate immune response receptor RIG-I
Length=925 Score = 1306 bits (3380), Expect = 0.0, Method: Compositional matrix adjust. Identities = 636/682 (93%), Positives = 636/682 (93%), Gaps = 0/682 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP Sbjct 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP Sbjct 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD Sbjct 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD Sbjct 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY Sbjct 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS Sbjct 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL Sbjct 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 DHNILIATSV AQCNLVILYEYVGNV Sbjct 662 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXXAQCNLVILYEYVGNV 721 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 IK GSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL Sbjct 722 IKXXXXXXXXXXXGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC Sbjct 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841 Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV Sbjct 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901 Query 902 QTLYSKWKDFHFEKIPFDPAEM 923 QTLYSKWKDFHFEKIPFDPAEM Sbjct 902 QTLYSKWKDFHFEKIPFDPAEM 923
>8scz_A A Antiviral innate immune response receptor RIG-I
Length=887 Score = 1304 bits (3374), Expect = 0.0, Method: Compositional matrix adjust. Identities = 635/682 (93%), Positives = 635/682 (93%), Gaps = 0/682 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP Sbjct 204 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 263 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP Sbjct 264 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 323 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD Sbjct 324 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 383 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD Sbjct 384 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 443 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY Sbjct 444 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 503 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS Sbjct 504 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 563 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL Sbjct 564 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 623 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 DHNILIATSV AQCNLVILYEYV Sbjct 624 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXXAQCNLVILYEYVXXX 683 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 GRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL Sbjct 684 XXXXXXXXXGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 743 Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC Sbjct 744 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 803 Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV Sbjct 804 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 863 Query 902 QTLYSKWKDFHFEKIPFDPAEM 923 QTLYSKWKDFHFEKIPFDPAEM Sbjct 864 QTLYSKWKDFHFEKIPFDPAEM 885
>8dvr_A A Antiviral innate immune response receptor RIG-I
Length=925 Score = 1304 bits (3374), Expect = 0.0, Method: Compositional matrix adjust. Identities = 635/682 (93%), Positives = 635/682 (93%), Gaps = 0/682 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP Sbjct 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP Sbjct 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD Sbjct 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD Sbjct 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY Sbjct 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS Sbjct 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL Sbjct 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 DHNILIATSV AQCNLVILYEYV Sbjct 662 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXXAQCNLVILYEYVXXX 721 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 GRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL Sbjct 722 XXXXXXXXXGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC Sbjct 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841 Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV Sbjct 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901 Query 902 QTLYSKWKDFHFEKIPFDPAEM 923 QTLYSKWKDFHFEKIPFDPAEM Sbjct 902 QTLYSKWKDFHFEKIPFDPAEM 923
>7to1_A A Antiviral innate immune response receptor RIG-I
Length=925 Score = 1304 bits (3374), Expect = 0.0, Method: Compositional matrix adjust. Identities = 635/682 (93%), Positives = 635/682 (93%), Gaps = 0/682 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP Sbjct 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP Sbjct 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD Sbjct 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD Sbjct 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY Sbjct 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS Sbjct 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL Sbjct 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 DHNILIATSV AQCNLVILYEYV Sbjct 662 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXXAQCNLVILYEYVXXX 721 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 GRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL Sbjct 722 XXXXXXXXXGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 Query 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC Sbjct 782 HIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKEC 841 Query 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV Sbjct 842 FVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGV 901 Query 902 QTLYSKWKDFHFEKIPFDPAEM 923 QTLYSKWKDFHFEKIPFDPAEM Sbjct 902 QTLYSKWKDFHFEKIPFDPAEM 923
>2ykg_A A PROBABLE ATP-DEPENDENT RNA HELICASE DDX58
Length=696 Score = 1297 bits (3357), Expect = 0.0, Method: Compositional matrix adjust. Identities = 633/687 (92%), Positives = 634/687 (92%), Gaps = 0/687 (0%) Query 236 NLYSPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVF 295 NLYS KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVF Sbjct 7 NLYSXXKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVF 66 Query 296 FANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL 355 FANQIPVYEQ KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL Sbjct 67 FANQIPVYEQNKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL 126 Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 415 KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG Sbjct 127 KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 186 Query 416 DAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII 475 DAK TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII Sbjct 187 DAKTTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII 246 Query 476 AQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRIC 535 AQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMV DEESRIC Sbjct 247 AQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVXXXXXXDEESRIC 306 Query 536 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 595 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ Sbjct 307 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 366 Query 596 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 655 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF Sbjct 367 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 426 Query 656 LKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILY 715 LKPGI DHNILIATSVADEG AQCNLVILY Sbjct 427 LKPGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVADEGXXXAQCNLVILY 486 Query 716 EYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV 775 EYV VIKM RGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV Sbjct 487 EYVXXVIKMXXXXXXXXXRGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV 546 Query 776 FREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLG 835 FREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIE+CHYTVLG Sbjct 547 FREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEDCHYTVLG 606 Query 836 DAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVE 895 DAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVE Sbjct 607 DAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVE 666 Query 896 DIATGVQTLYSKWKDFHFEKIPFDPAE 922 DIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 667 DIATGVQTLYSKWKDFHFEKIPFDPAE 693
>8g7u_C C Antiviral innate immune response receptor RIG-I
Length=925 Score = 1295 bits (3351), Expect = 0.0, Method: Compositional matrix adjust. Identities = 631/683 (92%), Positives = 631/683 (92%), Gaps = 0/683 (0%) Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ Sbjct 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299 Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT Sbjct 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN Sbjct 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM Sbjct 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479 Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF Sbjct 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539 Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES Sbjct 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599 Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG Sbjct 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659 Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719 IL DHNILIATSV CNLVILYEYV Sbjct 660 ILXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXXXXCNLVILYEYVX 719 Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779 RGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK Sbjct 720 XXXXXXXXXXXXXXRGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779 Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK Sbjct 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839 Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT Sbjct 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899 Query 900 GVQTLYSKWKDFHFEKIPFDPAE 922 GVQTLYSKWKDFHFEKIPFDPAE Sbjct 900 GVQTLYSKWKDFHFEKIPFDPAE 922
>3zd6_A A PROBABLE ATP-DEPENDENT RNA HELICASE DDX58
Length=696 Score = 1290 bits (3338), Expect = 0.0, Method: Compositional matrix adjust. Identities = 629/686 (92%), Positives = 629/686 (92%), Gaps = 0/686 (0%) Query 236 NLYSPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVF 295 NLYSPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFP GQKGKVVF Sbjct 7 NLYSPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPNGQKGKVVF 66 Query 296 FANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL 355 FANQIPVYEQ KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL Sbjct 67 FANQIPVYEQNKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL 126 Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 415 KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG Sbjct 127 KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 186 Query 416 DAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII 475 DAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII Sbjct 187 DAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII 246 Query 476 AQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRIC 535 AQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACM SRIC Sbjct 247 AQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMXXXXXXXXXXSRIC 306 Query 536 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 595 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ Sbjct 307 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 366 Query 596 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 655 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF Sbjct 367 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 426 Query 656 LKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILY 715 LKPGIL HNILI TSVAD AQCNLVILY Sbjct 427 LKPGILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNILILTSVADXXXXXAQCNLVILY 486 Query 716 EYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV 775 EYVGNVI ARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV Sbjct 487 EYVGNVIXXXXXXXXXXARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV 546 Query 776 FREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLG 835 FREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLG Sbjct 547 FREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLG 606 Query 836 DAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVE 895 DAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVE Sbjct 607 DAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVE 666 Query 896 DIATGVQTLYSKWKDFHFEKIPFDPA 921 DIATGVQTLYSKWKDFHFEKIPFDPA Sbjct 667 DIATGVQTLYSKWKDFHFEKIPFDPA 692
>4bpb_A A PROBABLE ATP-DEPENDENT RNA HELICASE DDX58
Length=698 Score = 1288 bits (3334), Expect = 0.0, Method: Compositional matrix adjust. Identities = 631/688 (92%), Positives = 632/688 (92%), Gaps = 2/688 (0%) Query 236 NLYSPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVF 295 NLYSPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVF Sbjct 7 NLYSPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVF 66 Query 296 FANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL 355 FANQIPVYEQ KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL Sbjct 67 FANQIPVYEQNKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL 126 Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 415 KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG Sbjct 127 KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 186 Query 416 DAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII 475 DAK TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII Sbjct 187 DAKTTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII 246 Query 476 AQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRIC 535 AQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMV DEESRIC Sbjct 247 AQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVXXXXXXDEESRIC 306 Query 536 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 595 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ Sbjct 307 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 366 Query 596 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 655 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF Sbjct 367 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 426 Query 656 LKPGI--LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVI 713 LKPGI HNILIATSVAD AQCNLVI Sbjct 427 LKPGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNILIATSVADXXXXXAQCNLVI 486 Query 714 LYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDE 773 LYEYV VIKM RGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDE Sbjct 487 LYEYVXXVIKMXXXXXXXXXRGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDE 546 Query 774 AVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTV 833 AVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIE+CHYTV Sbjct 547 AVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEDCHYTV 606 Query 834 LGDAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFV 893 LGDAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFV Sbjct 607 LGDAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFV 666 Query 894 VEDIATGVQTLYSKWKDFHFEKIPFDPA 921 VEDIATGVQTLYSKWKDFHFEKIPFDPA Sbjct 667 VEDIATGVQTLYSKWKDFHFEKIPFDPA 694
>4ay2_A A PROBABLE ATP-DEPENDENT RNA HELICASE DDX58
Length=687 Score = 1281 bits (3316), Expect = 0.0, Method: Compositional matrix adjust. Identities = 626/683 (92%), Positives = 627/683 (92%), Gaps = 0/683 (0%) Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ Sbjct 2 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 61 Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 IPVYEQ KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT Sbjct 62 IPVYEQNKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 121 Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN Sbjct 122 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 181 Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM Sbjct 182 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 241 Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMV EESRICKALF Sbjct 242 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVXXXXXXXEESRICKALF 301 Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES Sbjct 302 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 361 Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG Sbjct 362 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 421 Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719 IL GDHNILIATSVADE AQCNLVILYEYV Sbjct 422 ILXXXXXXXXXXXXXXXXXXXXXXXXXXXGDHNILIATSVADEXXXXAQCNLVILYEYVX 481 Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779 SKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK Sbjct 482 XXXXXXXXXXXXXXXXSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 541 Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIE+CHYTVLGDAFK Sbjct 542 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEDCHYTVLGDAFK 601 Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT Sbjct 602 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 661 Query 900 GVQTLYSKWKDFHFEKIPFDPAE 922 GVQTLYSKWKDFHFEKIPFDPAE Sbjct 662 GVQTLYSKWKDFHFEKIPFDPAE 684
>3zd7_A A PROBABLE ATP-DEPENDENT RNA HELICASE DDX58
Length=696 Score = 1263 bits (3267), Expect = 0.0, Method: Compositional matrix adjust. Identities = 619/687 (90%), Positives = 620/687 (90%), Gaps = 0/687 (0%) Query 236 NLYSPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVF 295 NLYSPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVF Sbjct 7 NLYSPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVF 66 Query 296 FANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL 355 FANQIPVYEQ KSVFSKYFERHGYRVTGISGATA VPVEQIVENNDIIILTPQILVNNL Sbjct 67 FANQIPVYEQNKSVFSKYFERHGYRVTGISGATAXXVPVEQIVENNDIIILTPQILVNNL 126 Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 415 KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG Sbjct 127 KKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 186 Query 416 DAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII 475 DAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII Sbjct 187 DAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYII 246 Query 476 AQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRIC 535 AQLMRDTESLAKRICKDLENLSQ QNREFGTQKYEQWIVTVQKACM SRIC Sbjct 247 AQLMRDTESLAKRICKDLENLSQSQNREFGTQKYEQWIVTVQKACMXXXXXXXXXXSRIC 306 Query 536 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 595 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ Sbjct 307 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 366 Query 596 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 655 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF Sbjct 367 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 426 Query 656 LKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILY 715 LKPGILT NILI TSVADEGIDIAQCNLVILY Sbjct 427 LKPGILTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNILILTSVADEGIDIAQCNLVILY 486 Query 716 EYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV 775 EYVGN ARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV Sbjct 487 EYVGNXXXXXXXXXXXXARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV 546 Query 776 FREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLG 835 FREKILHIQTHEKFIRDS KENKKLLCRKCKALACYTADVRVIE+CHYTVLG Sbjct 547 FREKILHIQTHEKFIRDSXXXXXXXXXKENKKLLCRKCKALACYTADVRVIEDCHYTVLG 606 Query 836 DAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVE 895 DAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVE Sbjct 607 DAFKECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVE 666 Query 896 DIATGVQTLYSKWKDFHFEKIPFDPAE 922 D TGVQTLYSKWKDFHFEKIPFDPAE Sbjct 667 DXXTGVQTLYSKWKDFHFEKIPFDPAE 693
>8g7v_C C Antiviral innate immune response receptor RIG-I
Length=925 Score = 1262 bits (3265), Expect = 0.0, Method: Compositional matrix adjust. Identities = 618/682 (91%), Positives = 618/682 (91%), Gaps = 0/682 (0%) Query 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ Sbjct 240 PFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299 Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT Sbjct 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN Sbjct 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM Sbjct 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLM 479 Query 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF Sbjct 480 RDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF 539 Query 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES Sbjct 540 LYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELES 599 Query 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG Sbjct 600 VSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPG 659 Query 660 ILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVG 719 IL DHNILIATSV CNLVILYEYV Sbjct 660 ILXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNILIATSVXXXXXXXXXCNLVILYEYVX 719 Query 720 NVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779 RGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK Sbjct 720 XXXXXXXXXXXXXXRGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREK 779 Query 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK Sbjct 780 ILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK 839 Query 840 ECFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899 ECFVSR KRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT Sbjct 840 ECFVSRXXXXXXXXXXXXKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIAT 899 Query 900 GVQTLYSKWKDFHFEKIPFDPA 921 GVQTLYSKWKDFHFEKIPFDPA Sbjct 900 GVQTLYSKWKDFHFEKIPFDPA 921
>8g7t_C C Antiviral innate immune response receptor RIG-I
Length=925 Score = 1257 bits (3253), Expect = 0.0, Method: Compositional matrix adjust. Identities = 616/681 (90%), Positives = 616/681 (90%), Gaps = 0/681 (0%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI Sbjct 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI Sbjct 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT Sbjct 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR Sbjct 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL Sbjct 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV Sbjct 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP Sbjct 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPXX 660 Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720 HNILIATSV NLVILYEYV Sbjct 661 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNILIATSVXXXXXXXXXXNLVILYEYVXX 720 Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 SKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI Sbjct 721 XXXXXXXXXXXXXXXSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 Query 781 LHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 LHIQTHEKFIRDS VPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE Sbjct 781 LHIQTHEKFIRDSXXXXXXVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE 840 Query 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG Sbjct 841 CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATG 900 Query 901 VQTLYSKWKDFHFEKIPFDPA 921 VQTLYSKWKDFHFEKIPFDPA Sbjct 901 VQTLYSKWKDFHFEKIPFDPA 921
>4on9_A A Probable ATP-dependent RNA helicase DDX58
Length=580 Score = 1049 bits (2713), Expect = 0.0, Method: Compositional matrix adjust. Identities = 514/552 (93%), Positives = 514/552 (93%), Gaps = 0/552 (0%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI Sbjct 28 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 87 Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 360 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI Sbjct 88 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTI 147 Query 361 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 420 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT Sbjct 148 PSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNT 207 Query 421 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 480 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR Sbjct 208 DEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMR 267 Query 481 DTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL 540 DTESLAKRICKDLE SQIQNREFGTQKYEQWIVTVQKACMV KDEESRICKALFL Sbjct 268 DTESLAKRICKDLEXXSQIQNREFGTQKYEQWIVTVQKACMVXXXXXKDEESRICKALFL 327 Query 541 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 600 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV Sbjct 328 YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESV 387 Query 601 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 660 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI Sbjct 388 SRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI 447 Query 661 LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 720 L FKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN Sbjct 448 LXXXXXXXXXXXXXXXXXXXXXXXFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGN 507 Query 721 VIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 780 VIKMIQ GSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI Sbjct 508 VIKMIQXXXXXXXXGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKI 567 Query 781 LHIQTHEKFIRD 792 LHIQTHEKFIRD Sbjct 568 LHIQTHEKFIRD 579
>4on9_B B Probable ATP-dependent RNA helicase DDX58
Length=580 Score = 1006 bits (2600), Expect = 0.0, Method: Compositional matrix adjust. Identities = 495/552 (90%), Positives = 495/552 (90%), Gaps = 0/552 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFP KGKVVFFANQIP Sbjct 29 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPXXXKGKVVFFANQIP 88 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQKSVFSKYFERHGYRVTGISG NVPVEQIVENNDIIILTPQILVNNLKKGTIP Sbjct 89 VYEQQKSVFSKYFERHGYRVTGISGXXXXNVPVEQIVENNDIIILTPQILVNNLKKGTIP 148 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLG SGPLPQVIGLTASVGVGDAKNTD Sbjct 149 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGXXSGPLPQVIGLTASVGVGDAKNTD 208 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD Sbjct 209 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 268 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY Sbjct 269 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 328 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS Sbjct 329 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 388 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGI Sbjct 389 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIX 448 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 SGDHNILIAT IAQCNLVILYEYVGNV Sbjct 449 XXXXXXXXXXXXXXXXXXXXXXXXXXSGDHNILIATXXXXXXXXIAQCNLVILYEYVGNV 508 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 GSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL Sbjct 509 XXXXXXXXXXXXXGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 568 Query 782 HIQTHEKFIRDS 793 HIQTHEKFIRDS Sbjct 569 HIQTHEKFIRDS 580
>3tbk_A A RIG-I Helicase Domain
Length=599 Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust. Identities = 413/555 (74%), Positives = 457/555 (82%), Gaps = 0/555 (0%) Query 239 SPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAN 298 SP KPRNYQLELALPA KGKNTIICAPTGCGKTFVSLLICEHHLKKFP GQKGKVVFFAN Sbjct 1 SPLKPRNYQLELALPAKKGKNTIICAPTGCGKTFVSLLICEHHLKKFPCGQKGKVVFFAN 60 Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358 QIPVYEQQ +VFS+YFER GY + ISGAT+++V V+ I+E+NDIIILTPQILVNNL G Sbjct 61 QIPVYEQQATVFSRYFERLGYNIASISGATSDSVSVQHIIEDNDIIILTPQILVNNLNNG 120 Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418 IPSLS+FTLMIFDECHNTSK HPYN IMF YLD KLG S PLPQV+GLTASVGVGDAK Sbjct 121 AIPSLSVFTLMIFDECHNTSKNHPYNQIMFRYLDHKLGESRDPLPQVVGLTASVGVGDAK 180 Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 478 +EA+ +ICKLCA+LDASVIATV+ N+ ELEQVVYKPQK RKV SR S+ FK II+QL Sbjct 181 TAEEAMQHICKLCAALDASVIATVRDNVAELEQVVYKPQKISRKVASRTSNTFKCIISQL 240 Query 479 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL 538 M++TE LAK + ++L L QIQNREFGTQKYEQWIV V KAC VFQM DK+EESR+CKAL Sbjct 241 MKETEKLAKDVSEELGKLFQIQNREFGTQKYEQWIVGVHKACSVFQMADKEEESRVCKAL 300 Query 539 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE 598 FLYTSHLRKYNDALIISE A+M DAL+YLK FF +VR E E++LT+RFEEKL+ELE Sbjct 301 FLYTSHLRKYNDALIISEDAQMTDALNYLKAFFHDVRXXXXXETERELTRRFEEKLEELE 360 Query 599 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKP 658 VSRDPSNENPKL DL +LQEEYHL PET TILFVKTRALVDALK WIE NP LSFLKP Sbjct 361 KVSRDPSNENPKLRDLYLVLQEEYHLKPETKTILFVKTRALVDALKKWIEENPALSFLKP 420 Query 659 GILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYV 718 GILTG D+NILIATSVADEGIDIA+CNLVILYEYV Sbjct 421 GILTGXXXXXXXXXXXXXXXXXXXXXXXXXXDNNILIATSVADEGIDIAECNLVILYEYV 480 Query 719 GNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE 778 GNVIKMIQTRGRGRAR SKCFLLTS+A VIEKE+ NM KEK+MN+SILRLQTWDE F + Sbjct 481 GNVIKMIQTRGRGRARDSKCFLLTSSADVIEKEKANMIKEKIMNESILRLQTWDEMKFGK 540 Query 779 KILHIQTHEKFIRDS 793 + IQ +EK +RDS Sbjct 541 TVHRIQVNEKLLRDS 555
>4a36_A A RETINOIC ACID INDUCIBLE PROTEIN I
Length=556 Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/551 (57%), Positives = 404/551 (73%), Gaps = 2/551 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 K R+YQ+ELA PA+ GKN +ICAPTG GKTFVS+LICEHH + P G+K KVVF A ++P Sbjct 7 KARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVP 66 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQK+VF +FER GY V GISG NV VE+++E++DII++TPQILVN+ + GT+ Sbjct 67 VYEQQKNVFKHHFERQGYSVQGISGENFSNVSVEKVIEDSDIIVVTPQILVNSFEDGTLT 126 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNT+ HPYN++M YL+QK +S LPQ++GLTASVGVG+AKN + Sbjct 127 SLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKFNSAS-QLPQILGLTASVGVGNAKNIE 185 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 E +++IC LC+ LD I+TV+ N++EL++ + KP+ R V+ RI + F II+ LM + Sbjct 186 ETIEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSE 245 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TE+L + I FGTQ YE WIV Q+ C +EESRIC+ALF+ Sbjct 246 TEALMRTI-XXXXXXXXXXXXXFGTQNYEHWIVVTQRKCRXXXXXXXEEESRICRALFIC 304 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 T HLRKYNDALIISE AR+ DAL YL +FF+NV+ + E+EQ LT +F+EK EL ++S Sbjct 305 TEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALS 364 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 +D +NENPKLE+L IL + Y NP+T T+LF KTRALV ALK +E NP L+++KPG+L Sbjct 365 KDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVL 424 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 GRG MTLP+QK +LDAFK S D+ +LIATSVADEGIDI QCNLV+LYEY GNV Sbjct 425 MGRGXXXXXXXMTLPSQKGVLDAFKTSKDNRLLIATSVADEGIDIVQCNLVVLYEYSGNV 484 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 KMIQ RGRGRA GSKC L+TS V+E E+ N YKE+MMN ++ ++Q WDE F +KI Sbjct 485 TKMIQVRGRGRAAGSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIH 544 Query 782 HIQTHEKFIRD 792 ++Q E+ +RD Sbjct 545 NLQMKERVLRD 555
>4a36_B B RETINOIC ACID INDUCIBLE PROTEIN I
Length=556 Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust. Identities = 311/551 (56%), Positives = 401/551 (73%), Gaps = 2/551 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 K R+YQ+ELA PA+ GKN +ICAPTG GKTFVS+LICEHH + P G+K KVVF A ++P Sbjct 7 KARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVP 66 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQK+VF +FER GY V GISG NV VE+++E++DII++TPQILVN+ + GT+ Sbjct 67 VYEQQKNVFKHHFERQGYSVQGISGENFSNVSVEKVIEDSDIIVVTPQILVNSFEDGTLT 126 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNT+ HPYN++M YL+QK +S LPQ++GLTASVGVG+AKN + Sbjct 127 SLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKFNSAS-QLPQILGLTASVGVGNAKNIE 185 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 E +++IC LC+ LD I+TV+ N++EL++ + KP+ R V+ RI + F II+ LM + Sbjct 186 ETIEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSE 245 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TE+L + I FGTQ YE WIV Q+ C SRIC+ALF+ Sbjct 246 TEALMRTI-YSXXXXXXXXXXXFGTQNYEHWIVVTQRKCRXXXXXXXXXXSRICRALFIC 304 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 T HLRKYNDALIISE AR+ DAL YL +FF+NV+ + E+EQ LT +F+EK EL ++S Sbjct 305 TEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALS 364 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 +D +NENPKLE+L IL + Y NP+T T+LF KTRALV ALK +E NP L+++KPG+L Sbjct 365 KDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVL 424 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 GRG MTLP+QK +LDAFK S D+ +LIATSVADEGIDI QCNLV+LYEY GNV Sbjct 425 MGRGXXXXXXXMTLPSQKGVLDAFKTSKDNRLLIATSVADEGIDIVQCNLVVLYEYSGNV 484 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 KMIQ RGRGRA GSKC L+TS V+E E+ N YKE+MMN ++ ++Q WDE F +KI Sbjct 485 TKMIQVRGRGRAAGSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIH 544 Query 782 HIQTHEKFIRD 792 ++Q E+ +RD Sbjct 545 NLQMKERVLRD 555
>4a2w_A A RETINOIC ACID INDUCIBLE PROTEIN I
Length=936 Score = 589 bits (1518), Expect = 0.0, Method: Compositional matrix adjust. Identities = 288/552 (52%), Positives = 380/552 (69%), Gaps = 2/552 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 K R+YQ+ELA PA+ GKN +ICAPTG GKTFVS+LICEHH + P G+K KVVF A ++P Sbjct 248 KARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVP 307 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQK+VF +FER GY V GISG VE+++E++DII++TPQILVN+ + GT+ Sbjct 308 VYEQQKNVFKHHFERQGYSVQGISGEXXXXXSVEKVIEDSDIIVVTPQILVNSFEDGTLT 367 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNT+ HPYN++M YL+QK S+ LPQ++GLTASVGVG+AKN + Sbjct 368 SLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKF-NSASQLPQILGLTASVGVGNAKNIE 426 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 E +++IC LC+ LD I+TV+ N++EL++ + KP+ R V+ RI + F II+ LM + Sbjct 427 ETIEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSE 486 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TE+L + I +FGTQ YE WIV Q+ C + Q+ DK+EESRIC+ALF+ Sbjct 487 TEALMRTI-XXXXXXXXXXXXDFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFIC 545 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 T HLRKYNDALIISE AR+ DAL YL +FF+NV+ + E+EQ LT +F+EK EL ++S Sbjct 546 TEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALS 605 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 +D +NENPKLE+L IL + Y NP+T T+LF KTRALV ALK +E NP L+++KPG+L Sbjct 606 KDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVL 665 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 D+ +LIATSV I QCNLV+LYEY GNV Sbjct 666 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDNRLLIATSVXXXXXXIVQCNLVVLYEYSGNV 725 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 KMIQ GSKC L+TS V+E E+ N YKE+MMN ++ ++Q WDE F +KI Sbjct 726 TKMIQVXXXXXXXGSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIH 785 Query 782 HIQTHEKFIRDS 793 ++Q E+ +RDS Sbjct 786 NLQMKERVLRDS 797 Score = 170 bits (431), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 88/186 (47%), Positives = 125/186 (67%), Gaps = 3/186 (2%) Query 2 TTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFL 61 T +++RSLQ ++ YI ++L+P Y+L M W +E++ ++ +G AA LFL + Sbjct 5 TADEKRSLQCYRRYIERSLNPVYVLGNMTDWL-PDELRERIRKEEERGVSGAAALFLDAV 63 Query 62 LELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIPT 121 L+L+ GWFRG LDA+ AGY+GL EAIE+WDF K+EKLE +R LLKR++ + P Sbjct 64 LQLEARGWFRGMLDAMLAAGYTGLAEAIENWDFSKLEKLELHRQLLKRIEATM-LEVDPV 122 Query 122 DIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKE-RN 180 +I +S CLI++ECEEI QI + AG KL+ECL RSDKE+WPK+L+LAL+ Sbjct 123 ALIPYISTCLIDRECEEIQQISENRSKAAGITKLIECLCRSDKEHWPKSLQLALDTTGYY 182 Query 181 KFSELW 186 + SELW Sbjct 183 RASELW 188
>4a2q_B B RETINOIC ACID INDUCIBLE PROTEIN I
Length=797 Score = 583 bits (1504), Expect = 0.0, Method: Compositional matrix adjust. Identities = 285/550 (52%), Positives = 377/550 (69%), Gaps = 2/550 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 K R+YQ+ELA PA+ GKN +ICAPTG GKTFVS+LICEHH + P G+K KVVF A ++P Sbjct 248 KARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVP 307 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQK+VF +FER GY V GISG VE+++E++DII++TPQILVN+ + GT+ Sbjct 308 VYEQQKNVFKHHFERQGYSVQGISGEXXXXXSVEKVIEDSDIIVVTPQILVNSFEDGTLT 367 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNT+ HPYN++M YL+QK S+ LPQ++GLTASVGVG+AKN + Sbjct 368 SLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKF-NSASQLPQILGLTASVGVGNAKNIE 426 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 E +++IC LC+ LD I+TV+ N++EL++ + KP+ R V+ RI + F II+ LM + Sbjct 427 ETIEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSE 486 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TE+L + I +FGTQ YE WIV Q+ C + Q+ DK+EESRIC+ALF+ Sbjct 487 TEALMRTI-XXXXXXXXXXXXDFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFIC 545 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 T HLRKYNDALIISE AR+ DAL YL +FF+NV+ + E+EQ LT +F+EK EL ++S Sbjct 546 TEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALS 605 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 +D +NENPKLE+L IL + Y NP+T T+LF KTRALV ALK +E NP L+++KPG+L Sbjct 606 KDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVL 665 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 D+ +LIATSV QCNLV+LYEY GNV Sbjct 666 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDNRLLIATSVXXXXXXXVQCNLVVLYEYSGNV 725 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 KMIQ GSKC L+TS V+E E+ N YKE+MMN ++ ++Q WDE F +KI Sbjct 726 TKMIQVXXXXXXXGSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIH 785 Query 782 HIQTHEKFIR 791 ++Q E+ +R Sbjct 786 NLQMKERVLR 795 Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 89/187 (48%), Positives = 126/187 (67%), Gaps = 3/187 (2%) Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60 MT +++RSLQ ++ YI ++L+P Y+L M W +E++ ++ +G AA LFL Sbjct 4 MTADEKRSLQCYRRYIERSLNPVYVLGNMTDWL-PDELRERIRKEEERGVSGAAALFLDA 62 Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120 +L+L+ GWFRG LDA+ AGY+GL EAIE+WDF K+EKLE +R LLKR++ + P Sbjct 63 VLQLEARGWFRGMLDAMLAAGYTGLAEAIENWDFSKLEKLELHRQLLKRIEATM-LEVDP 121 Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKE-R 179 +I +S CLI++ECEEI QI + AG KL+ECL RSDKE+WPK+L+LAL+ Sbjct 122 VALIPYISTCLIDRECEEIQQISENRSKAAGITKLIECLCRSDKEHWPKSLQLALDTTGY 181 Query 180 NKFSELW 186 + SELW Sbjct 182 YRASELW 188
>4a2w_B B RETINOIC ACID INDUCIBLE PROTEIN I
Length=936 Score = 582 bits (1501), Expect = 0.0, Method: Compositional matrix adjust. Identities = 285/552 (52%), Positives = 377/552 (68%), Gaps = 2/552 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 K R+YQ+ELA PA+ GKN +ICAPTG GKTFVS+LICEHH + P G+K KVVF A ++P Sbjct 248 KARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVP 307 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQK+VF +FER GY V GISG VE+++E++DII++TPQILVN+ + GT+ Sbjct 308 VYEQQKNVFKHHFERQGYSVQGISGEXXXXXSVEKVIEDSDIIVVTPQILVNSFEDGTLT 367 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNT+ HPYN++M YL+QK S+ LPQ++GLTASVGVG+AKN + Sbjct 368 SLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKF-NSASQLPQILGLTASVGVGNAKNIE 426 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 E +++IC LC+ LD I+TV+ N++EL++ + KP+ R V+ RI + F II+ LM + Sbjct 427 ETIEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSE 486 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TE+L + I +FGTQ YE WIV Q+ C + Q+ DK+EESRIC+ALF+ Sbjct 487 TEALMRTI-XXXXXXXXXXXXDFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFIC 545 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 T HLRKYNDALIISE AR+ DAL YL +FF+NV+ + E+EQ LT +F+EK EL ++S Sbjct 546 TEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALS 605 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 +D +NENPKLE+L IL + Y NP+T T+LF KTRALV ALK +E NP L+++KPG+L Sbjct 606 KDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVL 665 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 D+ +LIAT QCNLV+LYEY GNV Sbjct 666 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDNRLLIATXXXXXXXXXVQCNLVVLYEYSGNV 725 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 KMIQ GSKC L+TS V+E E+ N YKE+MMN ++ ++Q WDE F +KI Sbjct 726 TKMIQXXXXXXXXGSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIH 785 Query 782 HIQTHEKFIRDS 793 ++Q E+ +RDS Sbjct 786 NLQMKERVLRDS 797 Score = 170 bits (431), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 88/186 (47%), Positives = 125/186 (67%), Gaps = 3/186 (2%) Query 2 TTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFL 61 T +++RSLQ ++ YI ++L+P Y+L M W +E++ ++ +G AA LFL + Sbjct 5 TADEKRSLQCYRRYIERSLNPVYVLGNMTDWL-PDELRERIRKEEERGVSGAAALFLDAV 63 Query 62 LELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIPT 121 L+L+ GWFRG LDA+ AGY+GL EAIE+WDF K+EKLE +R LLKR++ + P Sbjct 64 LQLEARGWFRGMLDAMLAAGYTGLAEAIENWDFSKLEKLELHRQLLKRIEATM-LEVDPV 122 Query 122 DIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKE-RN 180 +I +S CLI++ECEEI QI + AG KL+ECL RSDKE+WPK+L+LAL+ Sbjct 123 ALIPYISTCLIDRECEEIQQISENRSKAAGITKLIECLCRSDKEHWPKSLQLALDTTGYY 182 Query 181 KFSELW 186 + SELW Sbjct 183 RASELW 188
>4a2q_A A RETINOIC ACID INDUCIBLE PROTEIN I
Length=797 Score = 581 bits (1497), Expect = 0.0, Method: Compositional matrix adjust. Identities = 284/549 (52%), Positives = 376/549 (68%), Gaps = 2/549 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 K R+YQ+ELA PA+ GKN +ICAPTG GKTFVS+LICEHH + P G+K KVVF A ++P Sbjct 248 KARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVP 307 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQK+VF +FER GY V GISG VE+++E++DII++TPQILVN+ + GT+ Sbjct 308 VYEQQKNVFKHHFERQGYSVQGISGEXXXXXSVEKVIEDSDIIVVTPQILVNSFEDGTLT 367 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNT+ HPYN++M YL+QK S+ LPQ++GLTASVGVG+AKN + Sbjct 368 SLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKF-NSASQLPQILGLTASVGVGNAKNIE 426 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 E +++IC LC+ LD I+TV+ N++EL++ + KP+ R V+ RI + F II+ LM + Sbjct 427 ETIEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSE 486 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TE+L + I +FGTQ YE WIV Q+ C + Q+ DK+EESRIC+ALF+ Sbjct 487 TEALMRTI-XXXXXXXXXXXXDFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFIC 545 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 T HLRKYNDALIISE AR+ DAL YL +FF+NV+ + E+EQ LT +F+EK EL ++S Sbjct 546 TEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALS 605 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 +D +NENPKLE+L IL + Y NP+T T+LF KTRALV ALK +E NP L+++KPG+L Sbjct 606 KDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVL 665 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 D+ +LIATSV QCNLV+LYEY GNV Sbjct 666 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDNRLLIATSVXXXXXXXVQCNLVVLYEYSGNV 725 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 KMIQ GSKC L+TS V+E E+ N YKE+MMN ++ ++Q WDE F +KI Sbjct 726 TKMIQVXXXXXXXGSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIH 785 Query 782 HIQTHEKFI 790 ++Q E+ + Sbjct 786 NLQMKERVL 794 Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 89/187 (48%), Positives = 126/187 (67%), Gaps = 3/187 (2%) Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60 MT +++RSLQ ++ YI ++L+P Y+L M W +E++ ++ +G AA LFL Sbjct 4 MTADEKRSLQCYRRYIERSLNPVYVLGNMTDWL-PDELRERIRKEEERGVSGAAALFLDA 62 Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120 +L+L+ GWFRG LDA+ AGY+GL EAIE+WDF K+EKLE +R LLKR++ + P Sbjct 63 VLQLEARGWFRGMLDAMLAAGYTGLAEAIENWDFSKLEKLELHRQLLKRIEATM-LEVDP 121 Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKE-R 179 +I +S CLI++ECEEI QI + AG KL+ECL RSDKE+WPK+L+LAL+ Sbjct 122 VALIPYISTCLIDRECEEIQQISENRSKAAGITKLIECLCRSDKEHWPKSLQLALDTTGY 181 Query 180 NKFSELW 186 + SELW Sbjct 182 YRASELW 188
>4a2q_C D RETINOIC ACID INDUCIBLE PROTEIN I
Length=797 Score = 577 bits (1486), Expect = 0.0, Method: Compositional matrix adjust. Identities = 282/549 (51%), Positives = 374/549 (68%), Gaps = 2/549 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 K R+YQ+ELA PA+ GKN +ICAPTG GKTFVS+LICEHH + P G+K KVVF A ++P Sbjct 248 KARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVP 307 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQK+VF +FER GY V GISG VE+++E++DII++TPQILVN+ + GT+ Sbjct 308 VYEQQKNVFKHHFERQGYSVQGISGEXXXXXSVEKVIEDSDIIVVTPQILVNSFEDGTLT 367 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNT+ HPYN++M YL+QK S+ LPQ++GLTASVGVG+AKN + Sbjct 368 SLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKF-NSASQLPQILGLTASVGVGNAKNIE 426 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 E +++IC LC+ LD I+TV+ N++EL++ + KP+ R V+ RI + F II+ LM + Sbjct 427 ETIEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSE 486 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TE+L + I +FGTQ YE WIV Q+ C + Q+ DK+EESRIC+ALF+ Sbjct 487 TEALMRTI-XXXXXXXXXXXXDFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFIC 545 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 T HLRKYNDALIISE AR+ DAL YL +FF+NV+ + E+EQ LT +F+EK EL ++S Sbjct 546 TEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALS 605 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 +D +NENPKLE+L IL + Y NP+T T+LF KTRALV ALK +E NP L+++KPG+L Sbjct 606 KDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVL 665 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 D+ +LIAT QCNLV+LYEY GNV Sbjct 666 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDNRLLIATXXXXXXXXXVQCNLVVLYEYSGNV 725 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 KMIQ GSKC L+TS V+E E+ N YKE+MMN ++ ++Q WDE F +KI Sbjct 726 TKMIQVXXXXXXXGSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIH 785 Query 782 HIQTHEKFI 790 ++Q E+ + Sbjct 786 NLQMKERVL 794 Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 88/186 (47%), Positives = 125/186 (67%), Gaps = 3/186 (2%) Query 2 TTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFL 61 T +++RSLQ ++ YI ++L+P Y+L M W +E++ ++ +G AA LFL + Sbjct 5 TADEKRSLQCYRRYIERSLNPVYVLGNMTDWL-PDELRERIRKEEERGVSGAAALFLDAV 63 Query 62 LELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIPT 121 L+L+ GWFRG LDA+ AGY+GL EAIE+WDF K+EKLE +R LLKR++ + P Sbjct 64 LQLEARGWFRGMLDAMLAAGYTGLAEAIENWDFSKLEKLELHRQLLKRIEATM-LEVDPV 122 Query 122 DIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKE-RN 180 +I +S CLI++ECEEI QI + AG KL+ECL RSDKE+WPK+L+LAL+ Sbjct 123 ALIPYISTCLIDRECEEIQQISENRSKAAGITKLIECLCRSDKEHWPKSLQLALDTTGYY 182 Query 181 KFSELW 186 + SELW Sbjct 183 RASELW 188
>4a2q_D E RETINOIC ACID INDUCIBLE PROTEIN I
Length=797 Score = 576 bits (1484), Expect = 0.0, Method: Compositional matrix adjust. Identities = 282/549 (51%), Positives = 373/549 (68%), Gaps = 2/549 (0%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 K R+YQ+ELA PA+ GKN +ICAPTG GKTFVS+LICEHH + P G+K KVVF A ++P Sbjct 248 KARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVP 307 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VYEQQK+VF +FER GY V GISG VE+++E++DII++TPQILVN+ + GT+ Sbjct 308 VYEQQKNVFKHHFERQGYSVQGISGEXXXXXSVEKVIEDSDIIVVTPQILVNSFEDGTLT 367 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTD 421 SLSIFTLMIFDECHNT+ HPYN++M YL+QK S+ LPQ++GLTASVGVG+AKN + Sbjct 368 SLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKF-NSASQLPQILGLTASVGVGNAKNIE 426 Query 422 EALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRD 481 E +++IC LC+ LD I+TV+ N++EL++ + KP+ R V+ RI + F II+ LM + Sbjct 427 ETIEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSE 486 Query 482 TESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY 541 TE+L + I FGTQ YE WIV Q+ C + Q+ DK+EESRIC+ALF+ Sbjct 487 TEALMRTI-XXXXXXXXXXXXXFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFIC 545 Query 542 TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVS 601 T HLRKYNDALIISE AR+ DAL YL +FF+NV+ + E+EQ LT +F+EK EL ++S Sbjct 546 TEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALS 605 Query 602 RDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL 661 +D +NENPKLE+L IL + Y NP+T T+LF KTRALV ALK +E NP L+++KPG+L Sbjct 606 KDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVL 665 Query 662 TGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNV 721 D+ +LIAT QCNLV+LYEY GNV Sbjct 666 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDNRLLIATXXXXXXXXXVQCNLVVLYEYSGNV 725 Query 722 IKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKIL 781 KMIQ GSKC L+TS V+E E+ N YKE+MMN ++ ++Q WDE F +KI Sbjct 726 TKMIQVXXXXXXXGSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIH 785 Query 782 HIQTHEKFI 790 ++Q E+ + Sbjct 786 NLQMKERVL 794 Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 88/186 (47%), Positives = 125/186 (67%), Gaps = 3/186 (2%) Query 2 TTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFL 61 T +++RSLQ ++ YI ++L+P Y+L M W +E++ ++ +G AA LFL + Sbjct 5 TADEKRSLQCYRRYIERSLNPVYVLGNMTDWL-PDELRERIRKEEERGVSGAAALFLDAV 63 Query 62 LELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIPT 121 L+L+ GWFRG LDA+ AGY+GL EAIE+WDF K+EKLE +R LLKR++ + P Sbjct 64 LQLEARGWFRGMLDAMLAAGYTGLAEAIENWDFSKLEKLELHRQLLKRIEATM-LEVDPV 122 Query 122 DIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKE-RN 180 +I +S CLI++ECEEI QI + AG KL+ECL RSDKE+WPK+L+LAL+ Sbjct 123 ALIPYISTCLIDRECEEIQQISENRSKAAGITKLIECLCRSDKEHWPKSLQLALDTTGYY 182 Query 181 KFSELW 186 + SELW Sbjct 183 RASELW 188
>4a2p_A A RETINOIC ACID INDUCIBLE PROTEIN I
Length=556 Score = 564 bits (1453), Expect = 0.0, Method: Compositional matrix adjust. Identities = 278/549 (51%), Positives = 369/549 (67%), Gaps = 2/549 (0%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVY 303 R+YQ+ELA PA+ GKN +ICAPTG GKTFVS+LICEHH + P G+K KVVF A ++PVY Sbjct 9 RSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPVY 68 Query 304 EQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSL 363 EQQK+VF +FER GY V GISG VE+++E++DII++TPQILVN+ + GT+ SL Sbjct 69 EQQKNVFKHHFERQGYSVQGISGEXXXXXSVEKVIEDSDIIVVTPQILVNSFEDGTLTSL 128 Query 364 SIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEA 423 SIFTLMIFDECHNT+ HPYN++M YL+QK S LPQ++GLTASVGVG+AKN +E Sbjct 129 SIFTLMIFDECHNTTGNHPYNVLMTRYLEQKF-NSXXXLPQILGLTASVGVGNAKNIEET 187 Query 424 LDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTE 483 +++IC LC+ LD I+TV+ N++EL++ + KP+ R V+ RI + F II+ LM +TE Sbjct 188 IEHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSETE 247 Query 484 SLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTS 543 +L + I ++FGTQ YE WIV Q+ C + DK+EESRIC+ALF+ T Sbjct 248 ALMRTI-YSXXXXXXXXXKDFGTQNYEHWIVVTQRKCRLLXXXDKEEESRICRALFICTE 306 Query 544 HLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRD 603 HLRKYNDALIISE AR+ DAL YL +FF+NV+ + E+EQ LT +F+EK EL ++S+D Sbjct 307 HLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALSKD 366 Query 604 PSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGILTG 663 +NENPKLE+L IL + Y NP+T T+LF KTRALV ALK +E NP L+++KPG+ Sbjct 367 ETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVXXX 426 Query 664 RGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIK 723 + +LIATS NLV+LYEY GNV K Sbjct 427 XXXXXXXXXXXXXXXXXXXXXXXXXXXNRLLIATSXXXXXXXXXXXNLVVLYEYSGNVTK 486 Query 724 MIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHI 783 MIQ SKC L+TS V+E E+ N YKE+MMN ++ ++Q WDE F +KI ++ Sbjct 487 MIQVXXXXXXXXSKCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIHNL 546 Query 784 QTHEKFIRD 792 Q E+ +RD Sbjct 547 QMKERVLRD 555
>4nqk_D D Probable ATP-dependent RNA helicase DDX58
Length=203 Score = 388 bits (997), Expect = 2e-128, Method: Compositional matrix adjust. Identities = 188/188 (100%), Positives = 188/188 (100%), Gaps = 0/188 (0%) Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF Sbjct 4 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 63 Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP Sbjct 64 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 123 Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN Sbjct 124 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 183 Query 181 KFSELWIV 188 KFSELWIV Sbjct 184 KFSELWIV 191
>4nqk_C C Probable ATP-dependent RNA helicase DDX58
Length=203 Score = 388 bits (997), Expect = 2e-128, Method: Compositional matrix adjust. Identities = 188/188 (100%), Positives = 188/188 (100%), Gaps = 0/188 (0%) Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF Sbjct 4 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 63 Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP Sbjct 64 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 123 Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN Sbjct 124 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 183 Query 181 KFSELWIV 188 KFSELWIV Sbjct 184 KFSELWIV 191
>4nqk_B B Probable ATP-dependent RNA helicase DDX58
Length=203 Score = 388 bits (997), Expect = 2e-128, Method: Compositional matrix adjust. Identities = 188/188 (100%), Positives = 188/188 (100%), Gaps = 0/188 (0%) Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF Sbjct 4 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 63 Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP Sbjct 64 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 123 Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN Sbjct 124 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 183 Query 181 KFSELWIV 188 KFSELWIV Sbjct 184 KFSELWIV 191
>4nqk_A A Probable ATP-dependent RNA helicase DDX58
Length=203 Score = 388 bits (997), Expect = 2e-128, Method: Compositional matrix adjust. Identities = 188/188 (100%), Positives = 188/188 (100%), Gaps = 0/188 (0%) Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF Sbjct 4 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 63 Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP Sbjct 64 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 123 Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN Sbjct 124 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 183 Query 181 KFSELWIV 188 KFSELWIV Sbjct 184 KFSELWIV 191
>4p4h_F F Probable ATP-dependent RNA helicase DDX58
Length=205 Score = 388 bits (997), Expect = 2e-128, Method: Compositional matrix adjust. Identities = 188/189 (99%), Positives = 188/189 (99%), Gaps = 0/189 (0%) Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPM AATLFLKF Sbjct 5 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMAAATLFLKF 64 Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP Sbjct 65 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 124 Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN Sbjct 125 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 184 Query 181 KFSELWIVE 189 KFSELWIVE Sbjct 185 KFSELWIVE 193
>4p4h_G G Probable ATP-dependent RNA helicase DDX58
Length=205 Score = 388 bits (997), Expect = 2e-128, Method: Compositional matrix adjust. Identities = 188/189 (99%), Positives = 188/189 (99%), Gaps = 0/189 (0%) Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPM AATLFLKF Sbjct 5 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMAAATLFLKF 64 Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP Sbjct 65 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 124 Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN Sbjct 125 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 184 Query 181 KFSELWIVE 189 KFSELWIVE Sbjct 185 KFSELWIVE 193
>4p4h_B B Probable ATP-dependent RNA helicase DDX58
Length=205 Score = 388 bits (997), Expect = 2e-128, Method: Compositional matrix adjust. Identities = 188/189 (99%), Positives = 188/189 (99%), Gaps = 0/189 (0%) Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPM AATLFLKF Sbjct 5 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMAAATLFLKF 64 Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP Sbjct 65 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 124 Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN Sbjct 125 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 184 Query 181 KFSELWIVE 189 KFSELWIVE Sbjct 185 KFSELWIVE 193
>4p4h_C C Probable ATP-dependent RNA helicase DDX58
Length=205 Score = 388 bits (997), Expect = 2e-128, Method: Compositional matrix adjust. Identities = 188/189 (99%), Positives = 188/189 (99%), Gaps = 0/189 (0%) Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPM AATLFLKF Sbjct 5 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMAAATLFLKF 64 Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP Sbjct 65 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 124 Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN Sbjct 125 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 184 Query 181 KFSELWIVE 189 KFSELWIVE Sbjct 185 KFSELWIVE 193
>4p4h_E E Probable ATP-dependent RNA helicase DDX58
Length=205 Score = 386 bits (992), Expect = 1e-127, Method: Compositional matrix adjust. Identities = 187/188 (99%), Positives = 187/188 (99%), Gaps = 0/188 (0%) Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPM AATLFLKF Sbjct 5 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMAAATLFLKF 64 Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP Sbjct 65 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 124 Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN Sbjct 125 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 184 Query 181 KFSELWIV 188 KFSELWIV Sbjct 185 KFSELWIV 192
>4p4h_A A Probable ATP-dependent RNA helicase DDX58
Length=205 Score = 386 bits (992), Expect = 1e-127, Method: Compositional matrix adjust. Identities = 187/188 (99%), Positives = 187/188 (99%), Gaps = 0/188 (0%) Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPM AATLFLKF Sbjct 5 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMAAATLFLKF 64 Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP Sbjct 65 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 124 Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN Sbjct 125 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 184 Query 181 KFSELWIV 188 KFSELWIV Sbjct 185 KFSELWIV 192
>4p4h_D D Probable ATP-dependent RNA helicase DDX58
Length=205 Score = 386 bits (992), Expect = 1e-127, Method: Compositional matrix adjust. Identities = 187/188 (99%), Positives = 187/188 (99%), Gaps = 0/188 (0%) Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPM AATLFLKF Sbjct 5 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMAAATLFLKF 64 Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP Sbjct 65 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 124 Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN Sbjct 125 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 184 Query 181 KFSELWIV 188 KFSELWIV Sbjct 185 KFSELWIV 192
>4p4h_H H Probable ATP-dependent RNA helicase DDX58
Length=205 Score = 386 bits (992), Expect = 1e-127, Method: Compositional matrix adjust. Identities = 187/188 (99%), Positives = 187/188 (99%), Gaps = 0/188 (0%) Query 1 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKF 60 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPM AATLFLKF Sbjct 5 MTTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMAAATLFLKF 64 Query 61 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 120 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP Sbjct 65 LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIP 124 Query 121 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 180 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN Sbjct 125 TDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERN 184 Query 181 KFSELWIV 188 KFSELWIV Sbjct 185 KFSELWIV 192
>6g19_A A Interferon-induced helicase C domain-containing protein
1 Length=696 Score = 369 bits (948), Expect = 2e-114, Method: Compositional matrix adjust. Identities = 247/701 (35%), Positives = 377/701 (54%), Gaps = 61/701 (9%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302 R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ + Sbjct 4 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 63 Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358 EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G Sbjct 64 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 122 Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408 LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL Sbjct 123 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKXXXXAIPLPQILGL 182 Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468 TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F + Sbjct 183 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIADDTRE 242 Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528 + FK + ++M ++ ++ +FGTQ YEQW + ++K D Sbjct 243 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 288 Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579 + + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F Sbjct 289 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNXXXXX 342 Query 580 ---DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETIT-ILFVK 635 DE ++ L F + + L+ ++ +P EN KL L + E++ + E+ I+F K Sbjct 343 XKLDETDEFLMNLFFDNKKMLKKLAENPKYENEKLIKLRNTILEQFTRSEESSRGIIFTK 402 Query 636 TRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 693 TR AL WI N K + +K L G G +++ MT QK ++ F+ +G+ N+ Sbjct 403 TRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TGEINL 461 Query 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN-AGVIEKEQ 752 LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+TS+ +GV E+E Sbjct 462 LIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSGSGVTEREI 521 Query 753 INMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KL 808 +N ++EKMM +I R+Q + KIL +Q EK ++ + K D + L Sbjct 522 VNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMKVKRSIAKQYNDNPSLITL 581 Query 809 LCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPK-PKQFSSFEKRAKIFCARQ 867 LC+ C L C ++ VIE+ H+ + FK ++ R + K ++ +I C Sbjct 582 LCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKALQKXXXXYQTNGEIIC--- 638 Query 868 NCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908 C WG + +K ++P +KI +FVV + Y KW Sbjct 639 KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKW 679
>5jc3_A A Melanoma differentiation associated protein-5
Length=701 Score = 369 bits (947), Expect = 3e-114, Method: Compositional matrix adjust. Identities = 239/707 (34%), Positives = 372/707 (53%), Gaps = 65/707 (9%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302 R+YQ+E+A PA+ G+N IIC PTG GKT V++ I + HL KK ++GKV+ N++P+ Sbjct 9 RDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKRKASEQGKVIVLVNKVPL 68 Query 303 YEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT--- 359 EQ F +H Y+V G+SG + + ++V+ D+II T QIL N+L T Sbjct 69 VEQHLRKEFNPFLKHWYQVIGLSGDSELKISFPEVVKRYDVIICTAQILENSLLNATEXX 128 Query 360 -IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVIGLTA 410 LS F+L+I D+CH+T K+ YN IM YL +K+ P PQ++GLTA Sbjct 129 ESVRLSDFSLIIIDQCHHTQKEGVYNNIMRRYLKEKIKNRKQAKEXXXLIPQPQILGLTA 188 Query 411 SVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDK 470 S GVG A++ +A ++I K+CA+LDA I TVK + +L+ V +P K + + D Sbjct 189 SPGVGGARSNSKAEEHILKICANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDP 248 Query 471 FKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDE 530 F+ I ++M+D + + K EFG+Q YEQW++ ++ ++ Sbjct 249 FRERIIEIMQDIQKYCQLYPKS----------EFGSQPYEQWVIREERRA----AKEEKR 294 Query 531 ESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVR--------------A 576 + R+C HL+KYNDAL I++ RM DA ++L +F+ ++ Sbjct 295 KERVC------AEHLKKYNDALQINDTIRMVDAYNHLNNFYKELKRRKTAESDDDXXXXX 348 Query 577 AGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKT 636 + DE ++ L + F K ++L+ ++R P +N KL L L EE+ E I+F KT Sbjct 349 SKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLMKLRNTLMEEFTKTEEPRGIIFTKT 408 Query 637 RALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNIL 694 R AL +WI NPK +K L G G ++ MT Q+ ++D F+ G N+L Sbjct 409 RQSALALYHWIMDNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRG-GSINLL 467 Query 695 IATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL-TSNAGVIEKEQI 753 IAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+ +S +G +E+E + Sbjct 468 IATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDV 527 Query 754 NMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKK------ 807 N+++E MM +I R+Q + KI Q I + Q K K K K Sbjct 528 NIFRENMMYKAIRRVQEMPPEEYLNKIQDFQLQS--IVEKQMKAKRDQRKTXXKNPSLIT 585 Query 808 LLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH-PKPKQFSSFEKRAKIFCAR 866 LC+ C L C D++VIE H+ + F+ + R + ++ +I C Sbjct 586 FLCKNCHKLICSGEDIQVIENMHHVSVKKDFQHLYHKRENXXXXXXXXXYQTNVEIIC-- 643 Query 867 QNCSHDWGIHVKYKTFEIPVIKIESFVV--EDIATGVQTLYSKWKDF 911 ++C WG + Y+ ++P +KI +FVV ED + ++ KW + Sbjct 644 KDCGQVWGNMMVYRGLDLPCLKIRNFVVAFEDXXX-TKEIFKKWGEL 689
>5jc3_D B Melanoma differentiation associated protein-5
Length=701 Score = 365 bits (938), Expect = 6e-113, Method: Compositional matrix adjust. Identities = 235/705 (33%), Positives = 372/705 (53%), Gaps = 61/705 (9%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302 R+YQ+E+A PA+ G+N IIC PTG GKT V++ I + HL KK ++GKV+ N++P+ Sbjct 9 RDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKRKASEQGKVIVLVNKVPL 68 Query 303 YEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT--- 359 EQ F +H Y+V G+SG + + ++V+ D+II T QIL N+L T Sbjct 69 VEQHLRKEFNPFLKHWYQVIGLSGDSELKISFPEVVKRYDVIICTAQILENSLLNATEXX 128 Query 360 -IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVIGLTA 410 LS F+L+I D+CH+T K+ YN IM YL +K+ P PQ++GLTA Sbjct 129 ESVRLSDFSLIIIDQCHHTQKEGVYNNIMRRYLKEKIKNRKQAKEXXXLIPQPQILGLTA 188 Query 411 SVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDK 470 S GVG A++ +A ++I K+CA+LDA I TVK + +L+ V +P K + + D Sbjct 189 SPGVGGARSNSKAEEHILKICANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDP 248 Query 471 FKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDE 530 F+ I ++M+D + + K EFG+Q YEQW++ ++ ++ Sbjct 249 FRERIIEIMQDIQKYCQLYPKS----------EFGSQPYEQWVIREERRA----AKEEKR 294 Query 531 ESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVR--------------A 576 + R+C HL+KYNDAL I++ RM DA ++L +F+ ++ Sbjct 295 KERVC------AEHLKKYNDALQINDTIRMVDAYNHLNNFYKELKRRKTAESDDDXXXXX 348 Query 577 AGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKT 636 + DE ++ L + F K ++L+ ++R P +N KL L L EE+ E I+F KT Sbjct 349 SKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLMKLRNTLMEEFTKTEEPRGIIFTKT 408 Query 637 RALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNIL 694 R AL +WI NPK +K L G G ++ MT Q+ ++D F+ G N+L Sbjct 409 RQSALALYHWIMDNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRG-GSINLL 467 Query 695 IATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL-TSNAGVIEKEQI 753 IAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+ +S +G +E+E + Sbjct 468 IATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDV 527 Query 754 NMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KLL 809 N+++E MM +I R+Q + KI Q EK ++ +++ L Sbjct 528 NIFRENMMYKAIRRVQEMPPEEYLNKIQDFQLQSIVEKQMKAKRDQRXXXXXXXXXITFL 587 Query 810 CRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH-PKPKQFSSFEKRAKIFCARQN 868 C+ C L C D++VIE H+ + F+ + R + ++ +I C ++ Sbjct 588 CKNCHKLICSGEDIQVIENMHHVSVKKDFQHLYHKRENXXXXXXXXXYQTNVEIIC--KD 645 Query 869 CSHDWGIHVKYKTFEIPVIKIESFVV--EDIATGVQTLYSKWKDF 911 C WG + Y+ ++P +KI +FVV ED + ++ KW + Sbjct 646 CGQVWGNMMVYRGLDLPCLKIRNFVVAFEDXXX-TKEIFKKWGEL 689
>5jch_A A Melanoma differentiation associated protein-5
Length=701 Score = 365 bits (936), Expect = 1e-112, Method: Compositional matrix adjust. Identities = 238/707 (34%), Positives = 370/707 (52%), Gaps = 65/707 (9%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302 R+YQ+E+A PA+ G+N IIC PTG GKT V++ I + HL KK ++GKV+ N++P+ Sbjct 9 RDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKRKASEQGKVIVLVNKVPL 68 Query 303 YEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPS 362 EQ F +H Y+V G+SG + + ++V+ D+II T QIL N+L Sbjct 69 VEQHLRKEFNPFLKHWYQVIGLSGDSELKISFPEVVKRYDVIICTAQILENSLLNXXXXX 128 Query 363 ----LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVIGLTA 410 LS F+L+I D+CH+T K+ YN IM YL +K+ P PQ++GLTA Sbjct 129 ESVRLSDFSLIIIDQCHHTQKEGVYNNIMRRYLKEKIKNRKQAKEXXXLIPQPQILGLTA 188 Query 411 SVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDK 470 S GVG A++ +A ++I K+CA+LDA I TVK + +L+ V +P K + + D Sbjct 189 SPGVGGARSNSKAEEHILKICANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDP 248 Query 471 FKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDE 530 F+ I ++M+D + + K EFG+Q YEQW++ ++ ++ Sbjct 249 FRERIIEIMQDIQKYCQLYPKS----------EFGSQPYEQWVIREERRA----AKEEKR 294 Query 531 ESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVR--------------A 576 + R+C HL+KYNDAL I++ RM DA ++L +F+ ++ Sbjct 295 KERVC------AEHLKKYNDALQINDTIRMVDAYNHLNNFYKELKRRKTAESDDXXXXXX 348 Query 577 AGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKT 636 + DE ++ L + F K ++L+ ++R P +N KL L L EE+ E I+F KT Sbjct 349 SKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLMKLRNTLMEEFTKTEEPRGIIFTKT 408 Query 637 RALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNIL 694 R AL +WI NPK +K L G G ++ MT Q+ ++D F+ G N+L Sbjct 409 RQSALALYHWIMDNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRG-GSINLL 467 Query 695 IATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL-TSNAGVIEKEQI 753 IAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+ +S +G +E+E + Sbjct 468 IATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDV 527 Query 754 NMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKK------ 807 N+++E MM +I R+Q + KI Q I + Q K K KK Sbjct 528 NIFRENMMYKAIRRVQEMPPEEYLNKIQDFQLQS--IVEKQMKAKRDQRXXXKKNPSLIT 585 Query 808 LLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH-PKPKQFSSFEKRAKIFCAR 866 LC+ C L C D++VIE H+ + F+ + R + + +I C Sbjct 586 FLCKNCHKLICSGEDIQVIENMHHVSVKKDFQHLYHKRENXXXXXXXXXXQTNVEIIC-- 643 Query 867 QNCSHDWGIHVKYKTFEIPVIKIESFVV--EDIATGVQTLYSKWKDF 911 ++C WG + Y+ ++P +KI +FVV ED + ++ KW + Sbjct 644 KDCGQVWGNMMVYRGLDLPCLKIRNFVVAFEDXXX-TKEIFKKWGEL 689
>5jcf_A A Melanoma differentiation associated protein-5
Length=701 Score = 364 bits (934), Expect = 3e-112, Method: Compositional matrix adjust. Identities = 235/705 (33%), Positives = 371/705 (53%), Gaps = 61/705 (9%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302 R+YQ+E+A PA+ G+N IIC PTG GKT V++ I + HL KK ++GKV+ N++P+ Sbjct 9 RDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKRKASEQGKVIVLVNKVPL 68 Query 303 YEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT--- 359 EQ F +H Y+V G+SG + + ++V+ D+II T QIL N+L T Sbjct 69 VEQHLRKEFNPFLKHWYQVIGLSGDSELKISFPEVVKRYDVIICTAQILENSLLNATEXX 128 Query 360 -IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVIGLTA 410 LS F+L+I D+CH+T K+ YN IM YL +K+ P PQ++GLTA Sbjct 129 ESVRLSDFSLIIIDQCHHTQKEGVYNNIMRRYLKEKIKNRKQAKEXXXLIPQPQILGLTA 188 Query 411 SVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDK 470 S GVG A++ +A ++I K+CA+LDA I TVK + +L+ V +P K + + D Sbjct 189 SPGVGGARSNSKAEEHILKICANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDP 248 Query 471 FKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDE 530 F+ I ++M+D + + K EFG+Q YEQW++ ++ ++ Sbjct 249 FRERIIEIMQDIQKYCQLYPKS----------EFGSQPYEQWVIREERRA----AKEEKR 294 Query 531 ESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVR--------------A 576 + R+C HL+KYNDAL I++ RM DA ++L +F+ ++ Sbjct 295 KERVC------AEHLKKYNDALQINDTIRMVDAYNHLNNFYKELKRRKTAESDDDXXXXX 348 Query 577 AGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKT 636 + DE ++ L + F K ++L+ ++R P +N KL L L EE+ E I+F KT Sbjct 349 SKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLMKLRNTLMEEFTKTEEPRGIIFTKT 408 Query 637 RALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNIL 694 R AL +WI NPK +K L G G ++ MT Q+ ++D F+ G N+L Sbjct 409 RQSALALYHWIMDNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRG-GSINLL 467 Query 695 IATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL-TSNAGVIEKEQI 753 IAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+ +S +G +E+E + Sbjct 468 IATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDV 527 Query 754 NMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KLL 809 N+++E MM +I R+Q + KI Q EK ++ +++ L Sbjct 528 NIFRENMMYKAIRRVQEMPPEEYLNKIQDFQLQSIVEKQMKAKRDQRXXXXXXXXXITFL 587 Query 810 CRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH-PKPKQFSSFEKRAKIFCARQN 868 C+ C L C D++VIE H+ + F+ + R + + +I C ++ Sbjct 588 CKNCHKLICSGEDIQVIENMHHVSVKKDFQHLYHKRENXXXXXXXXXXQTNVEIIC--KD 645 Query 869 CSHDWGIHVKYKTFEIPVIKIESFVV--EDIATGVQTLYSKWKDF 911 C WG + Y+ ++P +KI +FVV ED + ++ KW + Sbjct 646 CGQVWGNMMVYRGLDLPCLKIRNFVVAFEDXXX-TKEIFKKWGEL 689
>5jcf_D B Melanoma differentiation associated protein-5
Length=701 Score = 363 bits (933), Expect = 3e-112, Method: Compositional matrix adjust. Identities = 235/705 (33%), Positives = 371/705 (53%), Gaps = 61/705 (9%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302 R+YQ+E+A PA+ G+N IIC PTG GKT V++ I + HL KK ++GKV+ N++P+ Sbjct 9 RDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKRKASEQGKVIVLVNKVPL 68 Query 303 YEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT--- 359 EQ F +H Y+V G+SG + + ++V+ D+II T QIL N+L T Sbjct 69 VEQHLRKEFNPFLKHWYQVIGLSGDSELKISFPEVVKRYDVIICTAQILENSLLNATEXD 128 Query 360 -IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVIGLTA 410 LS F+L+I D+CH+T K+ YN IM YL +K+ P PQ++GLTA Sbjct 129 ESVRLSDFSLIIIDQCHHTQKEGVYNNIMRRYLKEKIKNRKQAKXXXXLIPQPQILGLTA 188 Query 411 SVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDK 470 S GVG A++ +A ++I K+CA+LDA I TVK + +L+ V +P K + + D Sbjct 189 SPGVGGARSNSKAEEHILKICANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDP 248 Query 471 FKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDE 530 F+ I ++M+D + + K EFG+Q YEQW++ ++ ++ Sbjct 249 FRERIIEIMQDIQKYCQLYPKS----------EFGSQPYEQWVIREERRA----AKEEKR 294 Query 531 ESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVR--------------A 576 + R+C HL+KYNDAL I++ RM DA ++L +F+ ++ Sbjct 295 KERVC------AEHLKKYNDALQINDTIRMVDAYNHLNNFYKELKRRKTAESDDDXXXXX 348 Query 577 AGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKT 636 + DE ++ L + F K ++L+ ++R P +N KL L L EE+ E I+F KT Sbjct 349 SKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLMKLRNTLMEEFTKTEEPRGIIFTKT 408 Query 637 RALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNIL 694 R AL +WI NPK +K L G G ++ MT Q+ ++D F+ G N+L Sbjct 409 RQSALALYHWIMDNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRG-GSINLL 467 Query 695 IATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL-TSNAGVIEKEQI 753 IAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+ +S +G +E+E + Sbjct 468 IATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDV 527 Query 754 NMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KLL 809 N+++E MM +I R+Q + KI Q EK ++ +++ L Sbjct 528 NIFRENMMYKAIRRVQEMPPEEYLNKIQDFQLQSIVEKQMKAKRDQRXXXXXXXXXITFL 587 Query 810 CRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH-PKPKQFSSFEKRAKIFCARQN 868 C+ C L C D++VIE H+ + F+ + R + + +I C ++ Sbjct 588 CKNCHKLICSGEDIQVIENMHHVSVKKDFQHLYHKRENXXXXXXXXXXQTNVEIIC--KD 645 Query 869 CSHDWGIHVKYKTFEIPVIKIESFVV--EDIATGVQTLYSKWKDF 911 C WG + Y+ ++P +KI +FVV ED + ++ KW + Sbjct 646 CGQVWGNMMVYRGLDLPCLKIRNFVVAFEDXXX-TKEIFKKWGEL 689
>6gjz_A A Interferon-induced helicase C domain-containing protein
1 Length=1007 Score = 369 bits (948), Expect = 3e-111, Method: Compositional matrix adjust. Identities = 247/701 (35%), Positives = 377/701 (54%), Gaps = 61/701 (9%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302 R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ + Sbjct 310 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 369 Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358 EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G Sbjct 370 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 428 Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408 LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL Sbjct 429 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKXXXXAIPLPQILGL 488 Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468 TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F + Sbjct 489 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIADDTRE 548 Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528 + FK + ++M ++ ++ +FGTQ YEQW + ++K D Sbjct 549 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 594 Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579 + + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F Sbjct 595 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNXXXXX 648 Query 580 ---DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETIT-ILFVK 635 DE ++ L F + + L+ ++ +P EN KL L + E++ + E+ I+F K Sbjct 649 XKLDETDEFLMNLFFDNKKMLKKLAENPKYENEKLIKLRNTILEQFTRSEESSRGIIFTK 708 Query 636 TRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 693 TR AL WI N K + +K L G G +++ MT QK ++ F+ +G+ N+ Sbjct 709 TRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TGEINL 767 Query 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN-AGVIEKEQ 752 LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+TS+ +GV E+E Sbjct 768 LIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSGSGVTEREI 827 Query 753 INMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KL 808 +N ++EKMM +I R+Q + KIL +Q EK ++ + K D + L Sbjct 828 VNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMKVKRSIAKQYNDNPSLITL 887 Query 809 LCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPK-PKQFSSFEKRAKIFCARQ 867 LC+ C L C ++ VIE+ H+ + FK ++ R + K ++ +I C Sbjct 888 LCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKALQKXXXXYQTNGEIIC--- 944 Query 868 NCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908 C WG + +K ++P +KI +FVV + Y KW Sbjct 945 KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKW 985
>5jch_D B Melanoma differentiation associated protein-5
Length=701 Score = 361 bits (926), Expect = 3e-111, Method: Compositional matrix adjust. Identities = 234/705 (33%), Positives = 370/705 (52%), Gaps = 61/705 (9%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302 R+YQ+E+A PA+ G+N IIC PTG GKT V++ I + HL KK ++GKV+ N++P+ Sbjct 9 RDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKRKASEQGKVIVLVNKVPL 68 Query 303 YEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPS 362 EQ F +H Y+V G+SG + + ++V+ D+II T QIL N+L Sbjct 69 VEQHLRKEFNPFLKHWYQVIGLSGDSELKISFPEVVKRYDVIICTAQILENSLLNXXXXX 128 Query 363 ----LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVIGLTA 410 LS F+L+I D+CH+T K+ YN IM YL +K+ P PQ++GLTA Sbjct 129 ESVRLSDFSLIIIDQCHHTQKEGVYNNIMRRYLKEKIKNRKQAKEXXXLIPQPQILGLTA 188 Query 411 SVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDK 470 S GVG A++ +A ++I K+CA+LDA I TVK + +L+ V +P K + + D Sbjct 189 SPGVGGARSNSKAEEHILKICANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDP 248 Query 471 FKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDE 530 F+ I ++M+D + + K EFG+Q YEQW++ ++ ++ Sbjct 249 FRERIIEIMQDIQKYCQLYPKS----------EFGSQPYEQWVIREERRA----AKEEKR 294 Query 531 ESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVR--------------A 576 + R+C HL+KYNDAL I++ RM DA ++L +F+ ++ Sbjct 295 KERVC------AEHLKKYNDALQINDTIRMVDAYNHLNNFYKELKRRKTAESDDXXXXXX 348 Query 577 AGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKT 636 + DE ++ L + F K ++L+ ++R P +N KL L L EE+ E I+F KT Sbjct 349 SKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLMKLRNTLMEEFTKTEEPRGIIFTKT 408 Query 637 RALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNIL 694 R AL +WI NPK +K L G G ++ MT Q+ ++D F+ G N+L Sbjct 409 RQSALALYHWIMDNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRG-GSINLL 467 Query 695 IATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL-TSNAGVIEKEQI 753 IAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+ +S +G +E+E + Sbjct 468 IATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDV 527 Query 754 NMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KLL 809 N+++E MM +I R+Q + KI Q EK ++ +++ L Sbjct 528 NIFRENMMYKAIRRVQEMPPEEYLNKIQDFQLQSIVEKQMKAKRDQRXXXXXXXXXITFL 587 Query 810 CRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH-PKPKQFSSFEKRAKIFCARQN 868 C+ C L C D++VIE H+ + F+ + R + + +I C ++ Sbjct 588 CKNCHKLICSGEDIQVIENMHHVSVKKDFQHLYHKRENXXXXXXXXXXQTNVEIIC--KD 645 Query 869 CSHDWGIHVKYKTFEIPVIKIESFVV--EDIATGVQTLYSKWKDF 911 C WG + Y+ ++P +KI +FVV ED + ++ KW + Sbjct 646 CGQVWGNMMVYRGLDLPCLKIRNFVVAFEDXXX-TKEIFKKWGEL 689
>6gkm_A A Interferon-induced helicase C domain-containing protein
1 Length=1007 Score = 368 bits (944), Expect = 9e-111, Method: Compositional matrix adjust. Identities = 244/702 (35%), Positives = 375/702 (53%), Gaps = 63/702 (9%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302 R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ + Sbjct 310 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 369 Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358 EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G Sbjct 370 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 428 Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408 LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL Sbjct 429 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGL 488 Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468 TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F + Sbjct 489 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIADDTRE 548 Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528 + FK + ++M ++ ++ +FGTQ YEQW + ++K D Sbjct 549 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 594 Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579 + + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F Sbjct 595 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNDSXXS 648 Query 580 ---DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETIT-ILFVK 635 DE ++ L F + + L+ ++ +P EN KL L + E++ + E+ I+F K Sbjct 649 LKLDETDEFLMNLFFDNKKMLKKLAENPKYENEKLIKLRNTILEQFTRSEESSRGIIFTK 708 Query 636 TRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 693 TR AL WI N K + +K L G G +++ MT QK ++ F+ +G+ N+ Sbjct 709 TRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TGEINL 767 Query 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN-AGVIEKEQ 752 LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+TS+ +GV E+E Sbjct 768 LIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSGSGVTEREI 827 Query 753 INMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKK----- 807 +N ++EKMM +I R+Q + KIL +Q + + + + + N Sbjct 828 VNDFREKMMYKAINRVQNMKPEEYAHKILELQV-QSILEKKMKVKRSIAXXYNDNPSLIT 886 Query 808 LLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPK-PKQFSSFEKRAKIFCAR 866 LLC+ C L C ++ VIE+ H+ + FK ++ R + K ++ +I C Sbjct 887 LLCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKALQKXXXDYQTNGEIIC-- 944 Query 867 QNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908 C WG + +K ++P +KI +FVV + Y KW Sbjct 945 -KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKW 985
>5jc7_B B Melanoma differentiation associated protein-5
Length=701 Score = 360 bits (923), Expect = 9e-111, Method: Compositional matrix adjust. Identities = 232/704 (33%), Positives = 367/704 (52%), Gaps = 59/704 (8%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302 R+YQ+E+A PA+ G+N IIC PTG GKT V++ I + HL KK ++GKV+ N++P+ Sbjct 9 RDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKRKASEQGKVIVLVNKVPL 68 Query 303 YEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPS 362 EQ F +H Y+V G+SG + + ++V+ D+II T QIL N+L Sbjct 69 VEQHLRKEFNPFLKHWYQVIGLSGDSELKISFPEVVKRYDVIICTAQILENSLLNXXXXX 128 Query 363 ----LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVIGLTA 410 LS F+L+I D+CH+T K+ YN IM YL +K+ P PQ++GLTA Sbjct 129 ESVRLSDFSLIIIDQCHHTQKEGVYNNIMRRYLKEKIKNRXXXXXXXXXXPQPQILGLTA 188 Query 411 SVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDK 470 S GVG A++ +A ++I K+CA+LDA I TVK + +L+ V +P K + + D Sbjct 189 SPGVGGARSNSKAEEHILKICANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDP 248 Query 471 FKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDE 530 F+ I ++M+D + + K EFG+Q YEQW++ ++ ++ Sbjct 249 FRERIIEIMQDIQKYCQLYPKS----------EFGSQPYEQWVIREERRA----AKEEKR 294 Query 531 ESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVR--------------A 576 + R+C HL+KYNDAL I++ RM DA ++L +F+ ++ Sbjct 295 KERVC------AEHLKKYNDALQINDTIRMVDAYNHLNNFYKELKRRKTAESXXXXXPLV 348 Query 577 AGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKT 636 + DE ++ L + F K ++L+ ++R P +N KL L L EE+ E I+F KT Sbjct 349 SKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLMKLRNTLMEEFTKTEEPRGIIFTKT 408 Query 637 RALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNIL 694 R AL +WI NPK +K L G G ++ MT Q+ ++D F+ G N+L Sbjct 409 RQSALALYHWIMDNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRG-GSINLL 467 Query 695 IATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL-TSNAGVIEKEQI 753 IAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+ +S +G +E+E + Sbjct 468 IATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDV 527 Query 754 NMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KLL 809 N+++E MM +I R+Q + KI Q EK ++ +++ L Sbjct 528 NIFRENMMYKAIRRVQEMPPEEYLNKIQDFQLQSIVEKQMKAKRDQRXXXXXXXXXITFL 587 Query 810 CRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRP-HPKPKQFSSFEKRAKIFCARQN 868 C+ C L C D++VIE H+ + F+ + R +I C ++ Sbjct 588 CKNCHKLICSGEDIQVIENMHHVSVKKDFQHLYHKREXXXXXXXXXXXXXXXEIIC--KD 645 Query 869 CSHDWGIHVKYKTFEIPVIKIESFVVE-DIATGVQTLYSKWKDF 911 C WG + Y+ ++P +KI +FVV + + ++ KW + Sbjct 646 CGQVWGNMMVYRGLDLPCLKIRNFVVAFEXXXTTKEIFKKWGEL 689
>5jc7_A A Melanoma differentiation associated protein-5
Length=701 Score = 359 bits (922), Expect = 1e-110, Method: Compositional matrix adjust. Identities = 232/704 (33%), Positives = 367/704 (52%), Gaps = 59/704 (8%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302 R+YQ+E+A PA+ G+N IIC PTG GKT V++ I + HL KK ++GKV+ N++P+ Sbjct 9 RDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKRKASEQGKVIVLVNKVPL 68 Query 303 YEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPS 362 EQ F +H Y+V G+SG + + ++V+ D+II T QIL N+L Sbjct 69 VEQHLRKEFNPFLKHWYQVIGLSGDSELKISFPEVVKRYDVIICTAQILENSLLNXXXXX 128 Query 363 ----LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVIGLTA 410 LS F+L+I D+CH+T K+ YN IM YL +K+ P PQ++GLTA Sbjct 129 ESVRLSDFSLIIIDQCHHTQKEGVYNNIMRRYLKEKIKNRXXXXXXXXXXPQPQILGLTA 188 Query 411 SVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDK 470 S GVG A++ +A ++I K+CA+LDA I TVK + +L+ V +P K + + D Sbjct 189 SPGVGGARSNSKAEEHILKICANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDP 248 Query 471 FKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDE 530 F+ I ++M+D + + K EFG+Q YEQW++ ++ ++ Sbjct 249 FRERIIEIMQDIQKYCQLYPKS----------EFGSQPYEQWVIREERRA----AKEEKR 294 Query 531 ESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVR--------------A 576 + R+C HL+KYNDAL I++ RM DA ++L +F+ ++ Sbjct 295 KERVC------AEHLKKYNDALQINDTIRMVDAYNHLNNFYKELKRRKTAESXXXXXXXX 348 Query 577 AGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKT 636 + DE ++ L + F K ++L+ ++R P +N KL L L EE+ E I+F KT Sbjct 349 SKQDETDEFLMRLFHAKKKQLKELARKPEYDNEKLMKLRNTLMEEFTKTEEPRGIIFTKT 408 Query 637 RALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNIL 694 R AL +WI NPK +K L G G ++ MT Q+ ++D F+ G N+L Sbjct 409 RQSALALYHWIMDNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRG-GSINLL 467 Query 695 IATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL-TSNAGVIEKEQI 753 IAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+ +S +G +E+E + Sbjct 468 IATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDV 527 Query 754 NMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KLL 809 N+++E MM +I R+Q + KI Q EK ++ +++ L Sbjct 528 NIFRENMMYKAIRRVQEMPPEEYLNKIQDFQLQSIVEKQMKAKRDQRXXXXXXXXXITFL 587 Query 810 CRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRP-HPKPKQFSSFEKRAKIFCARQN 868 C+ C L C D++VIE H+ + F+ + R +I C ++ Sbjct 588 CKNCHKLICSGEDIQVIENMHHVSVKKDFQHLYHKREXXXXXXXXXXXXXXXEIIC--KD 645 Query 869 CSHDWGIHVKYKTFEIPVIKIESFVVE-DIATGVQTLYSKWKDF 911 C WG + Y+ ++P +KI +FVV + + ++ KW + Sbjct 646 CGQVWGNMMVYRGLDLPCLKIRNFVVAFEXXXXTKEIFKKWGEL 689
>6gkh_A A Interferon-induced helicase C domain-containing protein
1 Length=1007 Score = 365 bits (937), Expect = 9e-110, Method: Compositional matrix adjust. Identities = 246/701 (35%), Positives = 375/701 (53%), Gaps = 61/701 (9%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302 R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ + Sbjct 310 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 369 Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358 EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G Sbjct 370 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 428 Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408 LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL Sbjct 429 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGL 488 Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468 TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F + Sbjct 489 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIADDTRE 548 Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528 + FK + ++M ++ ++ +FGTQ YEQW + ++K D Sbjct 549 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 594 Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579 + + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F Sbjct 595 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNDXXKS 648 Query 580 ---DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETIT-ILFVK 635 DE ++ L F + + L+ ++ +P EN KL L + E++ + E+ I+F K Sbjct 649 LKLDETDEFLMNLFFDNKKMLKKLAENPKYENEKLIKLRNTILEQFTRSEESSRGIIFTK 708 Query 636 TRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 693 TR AL WI N K + +K L G G +++ MT QK ++ F+ +G+ N+ Sbjct 709 TRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TGEINL 767 Query 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN-AGVIEKEQ 752 LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+TS+ +GV E+E Sbjct 768 LIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSGSGVTEREI 827 Query 753 INMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KL 808 +N ++EKMM +I R+Q + KIL +Q EK ++ + K D + L Sbjct 828 VNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMKVKRSIAKQYNDNPSLITL 887 Query 809 LCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH-PKPKQFSSFEKRAKIFCARQ 867 LC+ C L C ++ VIE+ H+ + FK ++ R + + +I C Sbjct 888 LCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENXXXXXXXXXXQTNGEIIC--- 944 Query 868 NCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908 C WG + +K ++P +KI +FVV + Y KW Sbjct 945 KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKW 985
>7bkp_A A Interferon-induced helicase C domain-containing protein
1 Length=1025 Score = 358 bits (919), Expect = 5e-107, Method: Compositional matrix adjust. Identities = 243/720 (34%), Positives = 374/720 (52%), Gaps = 81/720 (11%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302 R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ + Sbjct 310 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 369 Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358 EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G Sbjct 370 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 428 Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408 LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL Sbjct 429 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGL 488 Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468 TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F + Sbjct 489 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIADDTRE 548 Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528 + FK + ++M ++ ++ +FGTQ YEQW + ++K D Sbjct 549 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 594 Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579 + + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F Sbjct 595 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNDSXXX 648 Query 580 ---------------------DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFIL 618 DE ++ L F + + L+ ++ +P EN KL L + Sbjct 649 XXXXXXXXXXXXXXXXXSLKLDETDEFLMNLFFDNKKMLKKLAENPKYENEKLIKLRNTI 708 Query 619 QEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTL 675 E++ + E+ I+F KTR AL WI N K + +K L G G +++ MT Sbjct 709 LEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQ 768 Query 676 PAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARG 735 QK ++ F+ +G+ N+LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA Sbjct 769 TEQKEVISKFR-TGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 827 Query 736 SKCFLLTSN-AGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQ 794 S L+TS+ +GV E+E +N ++EKM +I R+Q + KIL +Q + + Sbjct 828 STYVLVTSSGSGVTEREIVNDFREKMKYKAINRVQNMKPEEYAHKILELQV-QSILEKKM 886 Query 795 EKPKPVPDKENKK-----LLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPK 849 + + + N LLC+ C L C ++ VIE+ H+ + FK ++ R + Sbjct 887 KVKRSIAXXYNDNPSLITLLCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKA 946 Query 850 -PKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908 K ++ +I C C WG + +K ++P +KI +FVV + Y KW Sbjct 947 LQKXXXDYQTNGEIIC---KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKW 1003
>7jl2_E C Interferon-induced helicase C domain-containing protein
1 Length=739 Score = 351 bits (900), Expect = 6e-107, Method: Compositional matrix adjust. Identities = 249/722 (34%), Positives = 367/722 (51%), Gaps = 84/722 (12%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302 R YQ+E+A PA++GKN IIC PTG GKT V++ I + HL KK + GKV+ N++ + Sbjct 23 RPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLL 82 Query 303 YEQQKSVFSKYFE---RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 EQ +F K F+ + YRV G+SG T + ++V++ DIII T QIL N+L Sbjct 83 VEQ---LFRKEFQPFLKKWYRVIGLSGDTQLKISFPEVVKSCDIIISTAQILENSLLNLX 139 Query 360 IP-----SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVI 406 LS F+L+I DECH+T+K+ YN IM +YL QKL + PLPQ++ Sbjct 140 XXXXAGVQLSDFSLIIIDECHHTNKEAVYNNIMRHYLMQKLKNNRLKKXXXXVIPLPQIL 199 Query 407 GLTASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESR 466 GLTAS GVG A +A ++I KLCA+LDA I TVK NL++L+ + +P K F + Sbjct 200 GLTASPGVGGATKQAKAEEHILKLCANLDAFTIKTVKENLDQLKNQIQEPCKKFAIADXX 259 Query 467 ISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMP 526 D FK + ++M ++ + + +S +FGTQ YEQW + ++K Sbjct 260 REDPFKEKLLEIMTRIQTYCQ-----MSPMS-----DFGTQPYEQWAIQMEKKA----AK 305 Query 527 DKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQD- 585 + + + R+C HLRKYN+AL I++ RM DA +L+ F++ + F IE Sbjct 306 EGNRKERVC------AEHLRKYNEALQINDTIRMIDAYTHLETFYNEEKDKKFAVIEXXX 359 Query 586 ------------------------------LTQRFEEKLQELESVSRDPSNENPKLEDLC 615 L F E + L+ ++ +P EN KL L Sbjct 360 XXXXXXXXXXXXXXXXXXXXXXXXXETDRFLMTLFFENNKMLKRLAENPEYENEKLTKLR 419 Query 616 FILQEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTG 672 + E+Y E+ I+F KTR AL WI N K + +K L G G +++ Sbjct 420 NTIMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGXSSEFKP 479 Query 673 MTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGR 732 MT QK ++ F+ +G N+LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR R Sbjct 480 MTQNEQKEVISKFR-TGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRAR 538 Query 733 ARGSKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIR 791 A S L+ S +GVIE+E +N ++EKMM +I +Q + KIL +Q + Sbjct 539 ADESTYVLVAHSGSGVIERETVNDFREKMMYKAIHCVQNMKPEEYAHKILELQMQSIMEK 598 Query 792 DSQEKPKPVPDKENK----KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH 847 + K N LC+ C LAC D+ VIE+ H+ + FKE ++ R Sbjct 599 KMKTKRNIAKHYXNNPSLITFLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKELYIVREK 658 Query 848 PKPKQFSSFEK-RAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYS 906 + +I C C WG + +K ++P +KI +FVV + Y Sbjct 659 XXXXXXXXXXQINGEIIC---KCGQAWGTMMVHKGLDLPCLKIRNFVVVFKNNSTKKQYK 715 Query 907 KW 908 KW Sbjct 716 KW 717
>7jl2_C A Interferon-induced helicase C domain-containing protein
1 Length=739 Score = 351 bits (900), Expect = 6e-107, Method: Compositional matrix adjust. Identities = 249/722 (34%), Positives = 367/722 (51%), Gaps = 84/722 (12%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302 R YQ+E+A PA++GKN IIC PTG GKT V++ I + HL KK + GKV+ N++ + Sbjct 23 RPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLL 82 Query 303 YEQQKSVFSKYFE---RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 EQ +F K F+ + YRV G+SG T + ++V++ DIII T QIL N+L Sbjct 83 VEQ---LFRKEFQPFLKKWYRVIGLSGDTQLKISFPEVVKSCDIIISTAQILENSLLNLX 139 Query 360 IP-----SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVI 406 LS F+L+I DECH+T+K+ YN IM +YL QKL + PLPQ++ Sbjct 140 XXXXAGVQLSDFSLIIIDECHHTNKEAVYNNIMRHYLMQKLKNNRLKKXXXXVIPLPQIL 199 Query 407 GLTASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESR 466 GLTAS GVG A +A ++I KLCA+LDA I TVK NL++L+ + +P K F + Sbjct 200 GLTASPGVGGATKQAKAEEHILKLCANLDAFTIKTVKENLDQLKNQIQEPCKKFAIADXX 259 Query 467 ISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMP 526 D FK + ++M ++ + + +S +FGTQ YEQW + ++K Sbjct 260 REDPFKEKLLEIMTRIQTYCQ-----MSPMS-----DFGTQPYEQWAIQMEKKA----AK 305 Query 527 DKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQD- 585 + + + R+C HLRKYN+AL I++ RM DA +L+ F++ + F IE Sbjct 306 EGNRKERVC------AEHLRKYNEALQINDTIRMIDAYTHLETFYNEEKDKKFAVIEXXX 359 Query 586 ------------------------------LTQRFEEKLQELESVSRDPSNENPKLEDLC 615 L F E + L+ ++ +P EN KL L Sbjct 360 XXXXXXXXXXXXXXXXXXXXXXXXXETDRFLMTLFFENNKMLKRLAENPEYENEKLTKLR 419 Query 616 FILQEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTG 672 + E+Y E+ I+F KTR AL WI N K + +K L G G +++ Sbjct 420 NTIMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGXSSEFKP 479 Query 673 MTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGR 732 MT QK ++ F+ +G N+LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR R Sbjct 480 MTQNEQKEVISKFR-TGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRAR 538 Query 733 ARGSKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIR 791 A S L+ S +GVIE+E +N ++EKMM +I +Q + KIL +Q + Sbjct 539 ADESTYVLVAHSGSGVIERETVNDFREKMMYKAIHCVQNMKPEEYAHKILELQMQSIMEK 598 Query 792 DSQEKPKPVPDKENK----KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH 847 + K N LC+ C LAC D+ VIE+ H+ + FKE ++ R Sbjct 599 KMKTKRNIAKHYXNNPSLITFLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKELYIVREK 658 Query 848 PKPKQFSSFEK-RAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYS 906 + +I C C WG + +K ++P +KI +FVV + Y Sbjct 659 XXXXXXXXXXQINGEIIC---KCGQAWGTMMVHKGLDLPCLKIRNFVVVFKNNSTKKQYK 715 Query 907 KW 908 KW Sbjct 716 KW 717
>7jl2_G E Interferon-induced helicase C domain-containing protein
1 Length=739 Score = 351 bits (900), Expect = 6e-107, Method: Compositional matrix adjust. Identities = 249/722 (34%), Positives = 367/722 (51%), Gaps = 84/722 (12%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302 R YQ+E+A PA++GKN IIC PTG GKT V++ I + HL KK + GKV+ N++ + Sbjct 23 RPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLL 82 Query 303 YEQQKSVFSKYFE---RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 EQ +F K F+ + YRV G+SG T + ++V++ DIII T QIL N+L Sbjct 83 VEQ---LFRKEFQPFLKKWYRVIGLSGDTQLKISFPEVVKSCDIIISTAQILENSLLNLX 139 Query 360 IP-----SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVI 406 LS F+L+I DECH+T+K+ YN IM +YL QKL + PLPQ++ Sbjct 140 XXXXAGVQLSDFSLIIIDECHHTNKEAVYNNIMRHYLMQKLKNNRLKKXXXXVIPLPQIL 199 Query 407 GLTASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESR 466 GLTAS GVG A +A ++I KLCA+LDA I TVK NL++L+ + +P K F + Sbjct 200 GLTASPGVGGATKQAKAEEHILKLCANLDAFTIKTVKENLDQLKNQIQEPCKKFAIADXX 259 Query 467 ISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMP 526 D FK + ++M ++ + + +S +FGTQ YEQW + ++K Sbjct 260 REDPFKEKLLEIMTRIQTYCQ-----MSPMS-----DFGTQPYEQWAIQMEKKA----AK 305 Query 527 DKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQD- 585 + + + R+C HLRKYN+AL I++ RM DA +L+ F++ + F IE Sbjct 306 EGNRKERVC------AEHLRKYNEALQINDTIRMIDAYTHLETFYNEEKDKKFAVIEXXX 359 Query 586 ------------------------------LTQRFEEKLQELESVSRDPSNENPKLEDLC 615 L F E + L+ ++ +P EN KL L Sbjct 360 XXXXXXXXXXXXXXXXXXXXXXXXXETDRFLMTLFFENNKMLKRLAENPEYENEKLTKLR 419 Query 616 FILQEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTG 672 + E+Y E+ I+F KTR AL WI N K + +K L G G +++ Sbjct 420 NTIMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGXSSEFKP 479 Query 673 MTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGR 732 MT QK ++ F+ +G N+LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR R Sbjct 480 MTQNEQKEVISKFR-TGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRAR 538 Query 733 ARGSKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIR 791 A S L+ S +GVIE+E +N ++EKMM +I +Q + KIL +Q + Sbjct 539 ADESTYVLVAHSGSGVIERETVNDFREKMMYKAIHCVQNMKPEEYAHKILELQMQSIMEK 598 Query 792 DSQEKPKPVPDKENK----KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH 847 + K N LC+ C LAC D+ VIE+ H+ + FKE ++ R Sbjct 599 KMKTKRNIAKHYXNNPSLITFLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKELYIVREK 658 Query 848 PKPKQFSSFEK-RAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYS 906 + +I C C WG + +K ++P +KI +FVV + Y Sbjct 659 XXXXXXXXXXQINGEIIC---KCGQAWGTMMVHKGLDLPCLKIRNFVVVFKNNSTKKQYK 715 Query 907 KW 908 KW Sbjct 716 KW 717
>7jl0_C A Interferon-induced helicase C domain-containing protein
1 Length=739 Score = 351 bits (900), Expect = 6e-107, Method: Compositional matrix adjust. Identities = 249/722 (34%), Positives = 367/722 (51%), Gaps = 84/722 (12%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302 R YQ+E+A PA++GKN IIC PTG GKT V++ I + HL KK + GKV+ N++ + Sbjct 23 RPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLL 82 Query 303 YEQQKSVFSKYFE---RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 EQ +F K F+ + YRV G+SG T + ++V++ DIII T QIL N+L Sbjct 83 VEQ---LFRKEFQPFLKKWYRVIGLSGDTQLKISFPEVVKSCDIIISTAQILENSLLNLX 139 Query 360 IP-----SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVI 406 LS F+L+I DECH+T+K+ YN IM +YL QKL + PLPQ++ Sbjct 140 XXXXAGVQLSDFSLIIIDECHHTNKEAVYNNIMRHYLMQKLKNNRLKKXXXXVIPLPQIL 199 Query 407 GLTASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESR 466 GLTAS GVG A +A ++I KLCA+LDA I TVK NL++L+ + +P K F + Sbjct 200 GLTASPGVGGATKQAKAEEHILKLCANLDAFTIKTVKENLDQLKNQIQEPCKKFAIADXX 259 Query 467 ISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMP 526 D FK + ++M ++ + + +S +FGTQ YEQW + ++K Sbjct 260 REDPFKEKLLEIMTRIQTYCQ-----MSPMS-----DFGTQPYEQWAIQMEKKA----AK 305 Query 527 DKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQD- 585 + + + R+C HLRKYN+AL I++ RM DA +L+ F++ + F IE Sbjct 306 EGNRKERVC------AEHLRKYNEALQINDTIRMIDAYTHLETFYNEEKDKKFAVIEXXX 359 Query 586 ------------------------------LTQRFEEKLQELESVSRDPSNENPKLEDLC 615 L F E + L+ ++ +P EN KL L Sbjct 360 XXXXXXXXXXXXXXXXXXXXXXXXXETDRFLMTLFFENNKMLKRLAENPEYENEKLTKLR 419 Query 616 FILQEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTG 672 + E+Y E+ I+F KTR AL WI N K + +K L G G +++ Sbjct 420 NTIMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGXSSEFKP 479 Query 673 MTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGR 732 MT QK ++ F+ +G N+LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR R Sbjct 480 MTQNEQKEVISKFR-TGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRAR 538 Query 733 ARGSKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIR 791 A S L+ S +GVIE+E +N ++EKMM +I +Q + KIL +Q + Sbjct 539 ADESTYVLVAHSGSGVIERETVNDFREKMMYKAIHCVQNMKPEEYAHKILELQMQSIMEK 598 Query 792 DSQEKPKPVPDKENK----KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH 847 + K N LC+ C LAC D+ VIE+ H+ + FKE ++ R Sbjct 599 KMKTKRNIAKHYXNNPSLITFLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKELYIVREK 658 Query 848 PKPKQFSSFEK-RAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYS 906 + +I C C WG + +K ++P +KI +FVV + Y Sbjct 659 XXXXXXXXXXQINGEIIC---KCGQAWGTMMVHKGLDLPCLKIRNFVVVFKNNSTKKQYK 715 Query 907 KW 908 KW Sbjct 716 KW 717
>6g1s_A A Interferon-induced helicase C domain-containing protein
1 Length=693 Score = 348 bits (894), Expect = 1e-106, Method: Compositional matrix adjust. Identities = 241/701 (34%), Positives = 364/701 (52%), Gaps = 61/701 (9%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302 R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ + Sbjct 1 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 60 Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358 EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G Sbjct 61 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 119 Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408 LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL Sbjct 120 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKXXXXXAIPLPQILGL 179 Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468 TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F Sbjct 180 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIAXXXXX 239 Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528 + FK + ++M ++ ++ +FGTQ YEQW + ++K D Sbjct 240 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 285 Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579 + + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F Sbjct 286 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNXXXXX 339 Query 580 ---DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLN-PETITILFVK 635 DE ++ L F + + L+ ++ +P KL L + E++ + + I+F K Sbjct 340 XXXDETDEFLMNLFFDNKKMLKKLAENPKXXXEKLIKLRNTILEQFTRSXXXSRGIIFTK 399 Query 636 TRALVDALKNWIEGNPK--LSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 693 TR AL WI N K +K L G G +++ MT QK ++ F+ + N+ Sbjct 400 TRQSTYALSQWIMENAKXXXXXVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TXXINL 458 Query 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN-AGVIEKEQ 752 LIAT+VA G+DI +CN+VI Y V N I M+Q RGR RA S L+TS+ GV E+E Sbjct 459 LIATTVAXXGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSXXGVTEREI 518 Query 753 INMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KL 808 +N ++EKMM +I R+Q + KIL +Q EK ++ + K D + L Sbjct 519 VNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMKVKRSIAKQYNDNPSLITL 578 Query 809 LCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEK-RAKIFCARQ 867 LC+ C L C ++ VIE+ H+ + FK ++ R + +I C Sbjct 579 LCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKXXXXXXXXXXTNGEIIC--- 635 Query 868 NCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908 C WG + +K ++P +KI +FVV + Y KW Sbjct 636 KCGQAWGTMMVHKGLDLPCLKIRNFVVNFXXXSPKKQYKKW 676
>6g1x_A A Interferon-induced helicase C domain-containing protein
1 Length=696 Score = 347 bits (891), Expect = 3e-106, Method: Compositional matrix adjust. Identities = 240/701 (34%), Positives = 364/701 (52%), Gaps = 61/701 (9%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302 R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ + Sbjct 4 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 63 Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358 EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G Sbjct 64 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 122 Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408 LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL Sbjct 123 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKXXXXAIPLPQILGL 182 Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468 TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F + Sbjct 183 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIADXXXX 242 Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528 + FK + ++M ++ ++ +FGTQ YEQW + ++K D Sbjct 243 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 288 Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579 + + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F Sbjct 289 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNXXXXX 342 Query 580 ---DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETI-TILFVK 635 DE ++ L F + + L+ ++ +P KL L + E++ + + I+F K Sbjct 343 XXLDETDEFLMNLFFDNKKMLKKLAENPXXXXEKLIKLRNTILEQFTRSXXSSRGIIFTK 402 Query 636 TRALVDALKNWIEGNP--KLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 693 TR AL WI N +K L G G +++ MT QK ++ F+ + N+ Sbjct 403 TRQSTYALSQWIMENAXXXXXXVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TXXINL 461 Query 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNA-GVIEKEQ 752 LIAT+VA G+DI +CN+VI Y V N I M+Q RGR RA S L+TS+ GV E+E Sbjct 462 LIATTVAXXGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSGXGVTEREI 521 Query 753 INMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KL 808 +N ++EKMM +I R+Q + KIL +Q EK ++ + K D + L Sbjct 522 VNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMKVKRSIAKQYNDNPSLITL 581 Query 809 LCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHP-KPKQFSSFEKRAKIFCARQ 867 LC+ C L C ++ VIE+ H+ + FK ++ R + +I C Sbjct 582 LCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKXXXXXXXXXXXXGEIIC--- 638 Query 868 NCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908 C WG + +K ++P +KI +FVV + Y KW Sbjct 639 KCGQAWGTMMVHKGLDLPCLKIRNFVVNFXXXXPKKQYKKW 679
>6h66_A A Interferon-induced helicase C domain-containing protein
1 Length=1007 Score = 355 bits (912), Expect = 3e-106, Method: Compositional matrix adjust. Identities = 243/701 (35%), Positives = 368/701 (52%), Gaps = 61/701 (9%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302 R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ + Sbjct 310 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 369 Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358 EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G Sbjct 370 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 428 Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408 LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL Sbjct 429 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGL 488 Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468 TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F Sbjct 489 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIAXXXXX 548 Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528 + FK + ++M ++ ++ +FGTQ YEQW + ++K D Sbjct 549 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 594 Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579 + + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F Sbjct 595 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNDSXXX 648 Query 580 ---DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETIT-ILFVK 635 DE ++ L F + + L+ ++ +P KL L + E++ + E+ I+F K Sbjct 649 XKLDETDEFLMNLFFDNKKMLKKLAENPKXXXEKLIKLRNTILEQFTRSEESSRGIIFTK 708 Query 636 TRALVDALKNWIEGNPKLSF--LKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 693 TR AL WI N K +K L G G +++ MT QK ++ F+ +G+ N+ Sbjct 709 TRQSTYALSQWIMENAKXXXVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TGEINL 767 Query 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN-AGVIEKEQ 752 LIAT+VA+EG+DI +CN+VI Y N I M+Q RGR RA S L+TS+ GV E+E Sbjct 768 LIATTVAEEGLDIKECNIVIRYGLXXNEIAMVQARGRARADESTYVLVTSSXXGVTEREI 827 Query 753 INMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KL 808 +N ++EKMM +I R+Q + KIL +Q EK ++ + K D + L Sbjct 828 VNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMKVKRSIAKQYNDNPSLITL 887 Query 809 LCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEK-RAKIFCARQ 867 LC+ C L C ++ VIE+ H+ + FK ++ R + +I C Sbjct 888 LCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKXXXXXXXXXXTNGEIIC--- 944 Query 868 NCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908 C WG + +K ++P +KI +FVV + Y KW Sbjct 945 KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKW 985
>7nic_A A Interferon-induced helicase C domain-containing protein
1 Length=1025 Score = 355 bits (912), Expect = 5e-106, Method: Compositional matrix adjust. Identities = 245/719 (34%), Positives = 374/719 (52%), Gaps = 79/719 (11%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302 R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ + Sbjct 310 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 369 Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358 EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G Sbjct 370 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 428 Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408 LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL Sbjct 429 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGL 488 Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468 TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F + Sbjct 489 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIADDTRE 548 Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528 + FK + ++M ++ ++ +FGTQ YEQW + ++K D Sbjct 549 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 594 Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579 + + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F Sbjct 595 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNXXXXX 648 Query 580 ---------------------DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFIL 618 DE ++ L F + + L+ ++ +P EN KL L + Sbjct 649 XXXXXXXXXXXXXXXXXSLKLDETDEFLMNLFFDNKKMLKKLAENPKYENEKLIKLRNTI 708 Query 619 QEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTL 675 E++ + E+ I+F KTR AL WI N K + +K L G G +++ MT Sbjct 709 LEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQ 768 Query 676 PAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARG 735 QK ++ F+ +G+ N+LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA Sbjct 769 TEQKEVISKFR-TGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 827 Query 736 SKCFLLTSN-AGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIR 791 S L+TS+ +GV E+E +N ++EKM +I R+Q + KIL +Q EK ++ Sbjct 828 STYVLVTSSGSGVTEREIVNDFREKMKYKAINRVQNMKPEEYAHKILELQVQSILEKKMK 887 Query 792 DSQEKPKPVPDKENK-KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPH-PK 849 + K D + LLC+ C L C ++ VIE+ H+ + FK ++ R + Sbjct 888 VKRSIAKQYNDNPSLITLLCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENXXX 947 Query 850 PKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908 + +I C C WG + +K ++P +KI +FVV + Y KW Sbjct 948 XXXXXXXQTNGEIIC---KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKW 1003
>4gl2_A A Interferon-induced helicase C domain-containing protein
1 Length=699 Score = 345 bits (884), Expect = 4e-105, Method: Compositional matrix adjust. Identities = 242/704 (34%), Positives = 359/704 (51%), Gaps = 66/704 (9%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302 R YQ+E+A PA++GKN IIC PTGCGKT V++ I + HL KK + GKV+ N++ + Sbjct 9 RPYQMEVAQPALEGKNIIICLPTGCGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLL 68 Query 303 YEQQKSVFSKYFE---RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 EQ +F K F+ + YRV G+S + ++V++ DIII T QIL N+L Sbjct 69 VEQ---LFRKEFQPFLKKWYRVIGLSXXXXLKISFPEVVKSCDIIISTAQILENSLLXXX 125 Query 360 IP-----SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVI 406 LS F+L+I DECH+T+K+ YN IM +YL QKL + PLPQ++ Sbjct 126 XXXXXGVQLSDFSLIIIDECHHTNKEAVYNNIMRHYLMQKLKNNRLKKXXXXVIPLPQIL 185 Query 407 GLTASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESR 466 GLTAS GVG A +A ++I KLCA+LDA I TVK NL++L+ + +P K F + Sbjct 186 GLTASPGVGGATKQAKAEEHILKLCANLDAFTIKTVKENLDQLKNQIQEPCKKFAIADXX 245 Query 467 ISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMP 526 FK + ++M ++ + + +S +FGTQ YEQW + ++K Sbjct 246 XXXPFKEKLLEIMTRIQTYCQ-----MSPMS-----DFGTQPYEQWAIQMEKKA----AK 291 Query 527 DKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF------- 579 + + + R+C HLRKYN+AL I++ RM DA +L+ F++ + F Sbjct 292 EGNRKERVC------AEHLRKYNEALQINDTIRMIDAYTHLETFYNEEKDKKFXXXXXXX 345 Query 580 ------DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETIT-IL 632 DE ++ L F E + L+ ++ +P KL L + E+Y E+ I+ Sbjct 346 XXXXXLDETDRFLMTLFFENNKMLKRLAENPXXXXEKLTKLRNTIMEQYTRTEESARGII 405 Query 633 FVKTRALVDALKNWIEGNPKLSFLKPGI--LTGRGKTNQNTGMTLPAQKCILDAFKASGD 690 F KTR AL WI N K + L G G +++ MT QK ++ F+ + Sbjct 406 FTKTRQSAYALSQWITENEKFAXXXXXAHHLIGAGHSSEFKPMTQNEQKEVISKFR-TXX 464 Query 691 HNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLT-SNAGVIE 749 N+LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA S L+ S +GVIE Sbjct 465 XNLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAHSGSGVIE 524 Query 750 KEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENK--- 806 +E +N ++EKMM +I +Q + KIL +Q + + K Sbjct 525 RETVNDFREKMMYKAIHCVQNMKPEEYAHKILELQMQSIMEKKMKTKXXXXXXXXXXPSL 584 Query 807 -KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSR-PHPKPKQFSSFEKRAKIFC 864 LC+ C LAC D+ VIE+ H+ + FKE ++ R +I C Sbjct 585 ITFLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKELYIVRXXXXXXXXXXXXXXXGEIIC 644 Query 865 ARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908 C WG + +K +P +KI +FVV + Y KW Sbjct 645 ---KCGQAWGTMMVHKXXXLPCLKIRNFVVVFKNNSTKKQYKKW 685
>4gl2_B B Interferon-induced helicase C domain-containing protein
1 Length=699 Score = 343 bits (881), Expect = 1e-104, Method: Compositional matrix adjust. Identities = 242/704 (34%), Positives = 359/704 (51%), Gaps = 66/704 (9%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302 R YQ+E+A PA++GKN IIC PTGCGKT V++ I + HL KK + GKV+ N++ + Sbjct 9 RPYQMEVAQPALEGKNIIICLPTGCGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLL 68 Query 303 YEQQKSVFSKYFE---RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 EQ +F K F+ + YRV G+SG + ++V++ DIII T QIL N+L Sbjct 69 VEQ---LFRKEFQPFLKKWYRVIGLSGXXXLKISFPEVVKSCDIIISTAQILENSLLNXX 125 Query 360 IP-----SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVI 406 LS F+L+I DECH+T+K+ YN IM +YL QKL + PLPQ++ Sbjct 126 XXXXXGVQLSDFSLIIIDECHHTNKEAVYNNIMRHYLMQKLKNNRLKKXXXXVIPLPQIL 185 Query 407 GLTASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESR 466 GLTAS GVG A +A ++I KLCA+LDA I TVK NL++L+ + +P K F Sbjct 186 GLTASPGVGGATKQAKAEEHILKLCANLDAFTIKTVKENLDQLKNQIQEPCKKFAIXXXX 245 Query 467 ISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMP 526 FK + ++M ++ + + +S +FGTQ YEQW + ++K Sbjct 246 XXXPFKEKLLEIMTRIQTYCQ-----MSPMS-----DFGTQPYEQWAIQMEKKA----AK 291 Query 527 DKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF------- 579 + + + R+C HLRKYN+AL I++ RM DA +L+ F++ + F Sbjct 292 EGNRKERVC------AEHLRKYNEALQINDTIRMIDAYTHLETFYNEEKDKKFXXXXXXX 345 Query 580 ------DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETIT-IL 632 DE ++ L F E + L+ ++ +P N KL L + E+Y E+ I+ Sbjct 346 XXXXXLDETDRFLMTLFFENNKMLKRLAENPXXXNEKLTKLRNTIMEQYTRTEESARGII 405 Query 633 FVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGD 690 F KTR AL WI N K + K L G G +++ MT QK ++ F+ +G Sbjct 406 FTKTRQSAYALSQWITENEKFAEVXXKAHHLIGAGHSSEFKPMTQNEQKEVISKFR-TGK 464 Query 691 HNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLT-SNAGVIE 749 +LIAT+VA+EG+DI +CN+VI Y V N I M+Q RG S L+ S +GVIE Sbjct 465 XXLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGXXXXDESTYVLVAHSGSGVIE 524 Query 750 KEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK 806 +E +N ++EKMM +I +Q + KIL +Q EK ++ + Sbjct 525 RETVNDFREKMMYKAIHCVQNMKPEEYAHKILELQMQSIMEKKMKXXXXXXXXXXXXPSL 584 Query 807 -KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSR-PHPKPKQFSSFEKRAKIFC 864 LC+ C LAC D+ VIE+ H+ + FKE ++ R +I C Sbjct 585 ITFLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKELYIVRXXXXXXXXXXXXXXXGEIIC 644 Query 865 ARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908 C WG + + +P +KI +FVV + Y KW Sbjct 645 ---KCGQAWGTMMVHXXXXLPCLKIRNFVVVFKNNSTKKQYKKW 685
>5jb2_A A LGP2
Length=680 Score = 342 bits (877), Expect = 3e-104, Method: Compositional matrix adjust. Identities = 219/687 (32%), Positives = 364/687 (53%), Gaps = 54/687 (8%) Query 245 NYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-KVVFFANQIPVY 303 YQLE PA++G+N+I+ PTG GKT ++ +C HL +G++G +V N++ + Sbjct 11 GYQLEAVAPALRGRNSIVWLPTGAGKTRAAVHVCRRHL----EGRRGGRVAVLVNKVHLV 66 Query 304 EQQKSVFSKYFE--RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 +Q K F R ++VT +SG ++ Q+ + +D++I T QIL N L G Sbjct 67 QQH---LEKEFHVLRDAFKVTAVSGDSSHKCFFGQLAKGSDVVICTAQILQNALLSGEEE 123 Query 362 S---LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418 + L+ F+L++ DECH+T K+ YN IM +YL +KL G LPQ++GLTAS G G Sbjct 124 ARVELTDFSLLVIDECHHTQKEAVYNKIMLSYLQKKLSGQR-DLPQILGLTASPGTGGET 182 Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 478 + + A+++I ++CA+LD VIA+ + + + L+ V +P K + + R D F + ++ Sbjct 183 SFEGAVEHILQICANLDTEVIASAQEHAQHLQSHVPQPTKQYDLCQEREQDPFGQRLKKI 242 Query 479 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL 538 M +I + +E QN FGTQ YEQ IV ++ R C+ Sbjct 243 M-------AQIQEHMEMPELPQN--FGTQVYEQRIVELENRAA----------ERFCRKT 283 Query 539 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE 598 + HLR+YNDAL+I++ RM DA L+ F+++ + D E+ L FEE L+ Sbjct 284 RVCALHLRRYNDALLINDTVRMMDAFQCLQQFYAD-KXXXKDPTERFLATTFEENRATLQ 342 Query 599 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKL--SFL 656 +++ D ENP+L L ILQE + + I+F KTR +L +W++ L + Sbjct 343 ALAGDQRYENPRLSKLEEILQEHFQPPGSSRGIVFTKTRQSAHSLLSWLQDTAGLCGQHI 402 Query 657 KPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYE 716 + +LTG G +NQ GMT Q+ ++ F+ G+ N+L +TSVA+EG+DI +CN+V+ Y Sbjct 403 RAAVLTGSGHSNQAKGMTQNEQQDVITLFR-YGELNLLFSTSVAEEGLDIPECNIVVRYG 461 Query 717 YVGNVIKMIQTRGRGRARGSKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV 775 + N I M+Q +GR RA+ S +L +N+ + +EQ+N +M +I +Q E Sbjct 462 LMTNEIAMVQAQGRARAQNSMYSVLAKANSREVYREQLNESLVGLMERAIRAVQAMPERK 521 Query 776 FREKILHIQTHE------KFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEEC 829 +R KI+ +Q + K R S+ + PD + C C C +D+R +E Sbjct 522 YRLKIVELQRNAVLSWQVKEARSSERRQLHDPD--DVYFHCVNCNVAVCRGSDIRTVEAM 579 Query 830 HYTVLGDAFKECFV---SRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPV 886 H+ + F+ + + H + + F +E +I C+ C +WG+ + Y+ +P+ Sbjct 580 HHVNINPNFRFYYTVSSGKIHFE-RTFRDWEPGCRIVCS--ECRQEWGMEMIYRNVTLPI 636 Query 887 IKIESFVVEDIATGVQTLYSKWKDFHF 913 + I++FVV + + Y KW F Sbjct 637 LSIKNFVV--VTPDEKKKYKKWSTVTF 661
>6h61_A A Interferon-induced helicase C domain-containing protein
1 Length=1007 Score = 350 bits (898), Expect = 3e-104, Method: Compositional matrix adjust. Identities = 241/701 (34%), Positives = 366/701 (52%), Gaps = 61/701 (9%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302 R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ + Sbjct 310 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 369 Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358 EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G Sbjct 370 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 428 Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408 LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL Sbjct 429 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNXXAIPLPQILGL 488 Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468 TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F Sbjct 489 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIAXXXXX 548 Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528 + FK + ++M ++ ++ +FGTQ YEQW + ++K D Sbjct 549 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 594 Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579 + + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F Sbjct 595 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNXXXXX 648 Query 580 ---DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETIT-ILFVK 635 DE ++ L F + + L+ ++ +P KL L + E++ + + I+F K Sbjct 649 XXLDETDEFLMNLFFDNKKMLKKLAENPKXXXEKLIKLRNTILEQFTRSEXSSRGIIFTK 708 Query 636 TRALVDALKNWIEGNPKLSF--LKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNI 693 TR AL WI N K +K L G G +++ MT QK ++ F+ +G+ N+ Sbjct 709 TRQSTYALSQWIMENAKXXXVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFR-TGEINL 767 Query 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN-AGVIEKEQ 752 LIAT+VA+ +DI +CN+VI Y V N I M+Q RGR RA S L+TS+ GV E+E Sbjct 768 LIATTVAEXXLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSXXGVTEREI 827 Query 753 INMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIRDSQEKPKPVPDKENK-KL 808 +N ++EKMM +I R+Q + KIL +Q EK ++ + K D + L Sbjct 828 VNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMKVKRSIAKQYNDNPSLITL 887 Query 809 LCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEK-RAKIFCARQ 867 LC+ C L C ++ VIE+ H+ + FK ++ R + +I C Sbjct 888 LCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKXXXXXXXXXXTNGEIIC--- 944 Query 868 NCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908 C WG + +K ++P +KI +FVV + Y KW Sbjct 945 KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKW 985
>7niq_A B Interferon-induced helicase C domain-containing protein
1 Length=1025 Score = 348 bits (892), Expect = 3e-103, Method: Compositional matrix adjust. Identities = 242/719 (34%), Positives = 369/719 (51%), Gaps = 79/719 (11%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302 R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ + Sbjct 310 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 369 Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358 EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G Sbjct 370 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 428 Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408 LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL Sbjct 429 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGL 488 Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468 TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F + Sbjct 489 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIADDTRE 548 Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528 + FK + ++M ++ ++ +FGTQ YEQW + ++K D Sbjct 549 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 594 Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579 + + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F Sbjct 595 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNXXXXX 648 Query 580 ---------------------DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFIL 618 DE ++ L F + + L+ ++ +P KL L + Sbjct 649 XXXXXXXXXXXXXXXXXXXXXDETDEFLMNLFFDNKKMLKKLAENPKXXXEKLIKLRNTI 708 Query 619 QEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTL 675 E++ + I+F KTR AL WI N K + +K L G G +++ MT Sbjct 709 LEQFTRSEXXXRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQ 768 Query 676 PAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARG 735 QK ++ F+ +G+ N+LIAT+VA+EG+DI +CN+VI Y V N I M+Q RGR RA Sbjct 769 TEQKEVISKFR-TGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 827 Query 736 SKCFLLTSN-AGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIR 791 S L+TS+ +GV E+E +N ++EKM +I R+Q + KIL +Q EK ++ Sbjct 828 STYVLVTSSGSGVTEREIVNDFREKMKYKAINRVQNMKPEEYAHKILELQVQSILEKKMK 887 Query 792 DSQEKPKPVPDKENK-KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKP 850 + K D + LLC+ C L C ++ VIE+ H+ + FK ++ R + Sbjct 888 VKRSIAKQYNDNPSLITLLCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKXX 947 Query 851 KQFSSFEK-RAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908 +I C C WG + +K ++P +KI +FVV + Y KW Sbjct 948 XXXXXXXXTNGEIIC---KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKW 1003
>5jbg_A A LGP2
Length=680 Score = 338 bits (868), Expect = 5e-103, Method: Compositional matrix adjust. Identities = 218/687 (32%), Positives = 360/687 (52%), Gaps = 54/687 (8%) Query 245 NYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-KVVFFANQIPVY 303 YQLE PA++G+N+I+ PTG GKT ++ +C HL +G++G +V N++ + Sbjct 11 GYQLEAVAPALRGRNSIVWLPTGAGKTRAAVHVCRRHL----EGRRGGRVAVLVNKVHLV 66 Query 304 EQQKSVFSKYFE--RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 +Q K F R ++VT +SG ++ Q+ + +D++I T QIL N L G Sbjct 67 QQH---LEKEFHVLRDAFKVTAVSGDSSHKCFFGQLAKGSDVVICTAQILQNALLSGEEE 123 Query 362 S---LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418 + L+ F+L++ DECH+T K+ YN IM +YL +KL G LPQ++GLTAS G G Sbjct 124 ARVELTDFSLLVIDECHHTQKEAVYNKIMLSYLQKKLSGQR-DLPQILGLTASPGTGGET 182 Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 478 + + A+++I ++CA+LD VIA+ + V +P K + + R D F + ++ Sbjct 183 SFEGAVEHILQICANLDTEVIASAQEXXXXXXXXVPQPTKQYDLCQEREQDPFGQRLKKI 242 Query 479 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL 538 M +I + +E QN FGTQ YEQ IV ++ R C+ Sbjct 243 M-------AQIQEHMEMPELPQN--FGTQVYEQRIVELENRAA----------ERFCRKT 283 Query 539 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE 598 + HLR+YNDAL+I++ RM DA L+ F+++ + D E+ L FEE L+ Sbjct 284 RVCALHLRRYNDALLINDTVRMMDAFQCLQQFYAD-KXXXKDPTERFLATTFEENRATLQ 342 Query 599 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKL--SFL 656 +++ D ENP+L L ILQE + + I+F KTR +L +W++ L + Sbjct 343 ALAGDQRYENPRLSKLEEILQEHFQPXGSSRGIVFTKTRQSAHSLLSWLQDTAGLCGQHI 402 Query 657 KPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYE 716 + +LTG G +NQ GMT Q+ ++ F+ G+ N+L +TSVA+EG+DI +CN+V+ Y Sbjct 403 RAAVLTGSGHSNQAKGMTQNEQQDVITLFR-YGELNLLFSTSVAEEGLDIPECNIVVRYG 461 Query 717 YVGNVIKMIQTRGRGRARGSKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV 775 + N I M+Q +GR RA+ S +L +N+ + +EQ+N +M +I +Q E Sbjct 462 LMTNEIAMVQAQGRARAQNSMYSVLAKANSREVYREQLNESLVGLMERAIRAVQAMPERK 521 Query 776 FREKILHIQTHE------KFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEEC 829 +R KI+ +Q + K R S+ + PD + C C C +D+R +E Sbjct 522 YRLKIVELQRNAVLSWQVKEARSSERRQLHDPD--DVYFHCVNCNVAVCRGSDIRTVEAM 579 Query 830 HYTVLGDAFKECFV---SRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPV 886 H+ + F+ + + H + + F +E +I C+ C +WG+ + Y+ +P+ Sbjct 580 HHVNINPNFRFYYTVSSGKIHFE-RTFRDWEPGCRIVCS--ECRQEWGMEMIYRNVTLPI 636 Query 887 IKIESFVVEDIATGVQTLYSKWKDFHF 913 + I++FVV + + Y KW F Sbjct 637 LSIKNFVV--VTPDEKKKYKKWSTVTF 661
>5jaj_A A LGP2
Length=681 Score = 338 bits (866), Expect = 1e-102, Method: Compositional matrix adjust. Identities = 218/687 (32%), Positives = 361/687 (53%), Gaps = 54/687 (8%) Query 245 NYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-KVVFFANQIPVY 303 YQLE PA++G+N+I+ PTG GKT ++ +C HL +G++G +V N++ + Sbjct 12 GYQLEAVAPALRGRNSIVWLPTGAGKTRAAVHVCRRHL----EGRRGGRVAVLVNKVHLV 67 Query 304 EQQKSVFSKYFE--RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 +Q K F R ++VT +SG ++ Q+ + +D++I T QIL N L G Sbjct 68 QQH---LEKEFHVLRDAFKVTAVSGDSSHKCFFGQLAKGSDVVICTAQILQNALLSGEEE 124 Query 362 S---LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418 + L+ F+L++ DECH+T K+ YN IM +YL +KL G LPQ++GLTAS G G Sbjct 125 ARVELTDFSLLVIDECHHTQKEAVYNKIMLSYLQKKLSGQR-DLPQILGLTASPGTGGET 183 Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 478 + + A+++I ++CA+LD VIA+ + +P K + + R D F + ++ Sbjct 184 SFEGAVEHILQICANLDTEVIASAQXXXXXXXXXXXQPTKQYDLCQEREQDPFGQRLKKI 243 Query 479 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL 538 M +I + +E QN FGTQ YEQ IV ++ ++ E R C+ Sbjct 244 M-------AQIQEHMEMPELPQN--FGTQVYEQRIV---------ELENRAAE-RFCRKT 284 Query 539 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE 598 + HLR+YNDAL+I++ RM DA L+ F+++ D E+ L FEE L+ Sbjct 285 RVCALHLRRYNDALLINDTVRMMDAFQCLQQFYADXXXXK-DPTERFLATTFEENRATLQ 343 Query 599 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKL--SFL 656 +++ D ENP+L L ILQE + + I+F KTR +L +W++ L + Sbjct 344 ALAGDQRYENPRLSKLEEILQEHFQXXGSSRGIVFTKTRQSAHSLLSWLQDTAGLCGQHI 403 Query 657 KPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYE 716 + +LTG G +NQ GMT Q+ ++ F+ G+ N+L +TSVA+EG+DI +CN+V+ Y Sbjct 404 RAAVLTGSGHSNQAKGMTQNEQQDVITLFR-YGELNLLFSTSVAEEGLDIPECNIVVRYG 462 Query 717 YVGNVIKMIQTRGRGRARGSKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV 775 + N I M+Q +GR RA+ S +L +N+ + +EQ+N +M +I +Q E Sbjct 463 LMTNEIAMVQAQGRARAQNSMYSVLAKANSREVYREQLNESLVGLMERAIRAVQAMPERK 522 Query 776 FREKILHIQTHE------KFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEEC 829 +R KI+ +Q + K R S+ + PD + C C C +D+R +E Sbjct 523 YRLKIVELQRNAVLSWQVKEARSSERRQLHDPD--DVYFHCVNCNVAVCRGSDIRTVEAM 580 Query 830 HYTVLGDAFKECFV---SRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPV 886 H+ + F+ + + H + + F +E +I C+ C +WG+ + Y+ +P+ Sbjct 581 HHVNINPNFRFYYTVSSGKIHFE-RTFRDWEPGCRIVCS--ECRQEWGMEMIYRNVTLPI 637 Query 887 IKIESFVVEDIATGVQTLYSKWKDFHF 913 + I++FVV + + Y KW F Sbjct 638 LSIKNFVV--VTPDEKKKYKKWSTVTF 662
>6bzh_C C Probable ATP-dependent RNA helicase DDX58
Length=194 Score = 303 bits (776), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 143/188 (76%), Positives = 167/188 (89%), Gaps = 0/188 (0%) Query 2 TTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFL 61 T EQR++LQAF+DYI+K LDPTYILSYM+ W +EEVQYIQAEKNNKGPMEAA+LFL++L Sbjct 7 TAEQRQNLQAFRDYIKKILDPTYILSYMSSWLEDEEVQYIQAEKNNKGPMEAASLFLQYL 66 Query 62 LELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIPT 121 L+LQ EGWF+ FLDAL HAGY GL EAIESWDF+KIEKLEE+RLLL+RL+PEFK + P Sbjct 67 LKLQSEGWFQAFLDALYHAGYCGLCEAIESWDFQKIEKLEEHRLLLRRLEPEFKATVDPN 126 Query 122 DIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERNK 181 DI+S+LSECLINQECEEI QI TKG MAGAEK+ ECL+RSDKENWPK L+LALEK+ +K Sbjct 127 DILSELSECLINQECEEIRQIRDTKGRMAGAEKMAECLIRSDKENWPKVLQLALEKDNSK 186 Query 182 FSELWIVE 189 FSELWIV+ Sbjct 187 FSELWIVD 194
>6bzh_B B Probable ATP-dependent RNA helicase DDX58
Length=194 Score = 303 bits (776), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 143/187 (76%), Positives = 166/187 (89%), Gaps = 0/187 (0%) Query 2 TTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFL 61 T EQR++LQAF+DYI+K LDPTYILSYM+ W +EEVQYIQAEKNNKGPMEAA+LFL++L Sbjct 7 TAEQRQNLQAFRDYIKKILDPTYILSYMSSWLEDEEVQYIQAEKNNKGPMEAASLFLQYL 66 Query 62 LELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIPT 121 L+LQ EGWF+ FLDAL HAGY GL EAIESWDF+KIEKLEE+RLLL+RL+PEFK + P Sbjct 67 LKLQSEGWFQAFLDALYHAGYCGLCEAIESWDFQKIEKLEEHRLLLRRLEPEFKATVDPN 126 Query 122 DIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERNK 181 DI+S+LSECLINQECEEI QI TKG MAGAEK+ ECL+RSDKENWPK L+LALEK+ +K Sbjct 127 DILSELSECLINQECEEIRQIRDTKGRMAGAEKMAECLIRSDKENWPKVLQLALEKDNSK 186 Query 182 FSELWIV 188 FSELWIV Sbjct 187 FSELWIV 193
>6bzh_E E Probable ATP-dependent RNA helicase DDX58
Length=194 Score = 303 bits (775), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 143/187 (76%), Positives = 166/187 (89%), Gaps = 0/187 (0%) Query 2 TTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFL 61 T EQR++LQAF+DYI+K LDPTYILSYM+ W +EEVQYIQAEKNNKGPMEAA+LFL++L Sbjct 7 TAEQRQNLQAFRDYIKKILDPTYILSYMSSWLEDEEVQYIQAEKNNKGPMEAASLFLQYL 66 Query 62 LELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIPT 121 L+LQ EGWF+ FLDAL HAGY GL EAIESWDF+KIEKLEE+RLLL+RL+PEFK + P Sbjct 67 LKLQSEGWFQAFLDALYHAGYCGLCEAIESWDFQKIEKLEEHRLLLRRLEPEFKATVDPN 126 Query 122 DIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERNK 181 DI+S+LSECLINQECEEI QI TKG MAGAEK+ ECL+RSDKENWPK L+LALEK+ +K Sbjct 127 DILSELSECLINQECEEIRQIRDTKGRMAGAEKMAECLIRSDKENWPKVLQLALEKDNSK 186 Query 182 FSELWIV 188 FSELWIV Sbjct 187 FSELWIV 193
>6bzh_A A Probable ATP-dependent RNA helicase DDX58
Length=194 Score = 303 bits (775), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 143/187 (76%), Positives = 166/187 (89%), Gaps = 0/187 (0%) Query 2 TTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFL 61 T EQR++LQAF+DYI+K LDPTYILSYM+ W +EEVQYIQAEKNNKGPMEAA+LFL++L Sbjct 7 TAEQRQNLQAFRDYIKKILDPTYILSYMSSWLEDEEVQYIQAEKNNKGPMEAASLFLQYL 66 Query 62 LELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIPT 121 L+LQ EGWF+ FLDAL HAGY GL EAIESWDF+KIEKLEE+RLLL+RL+PEFK + P Sbjct 67 LKLQSEGWFQAFLDALYHAGYCGLCEAIESWDFQKIEKLEEHRLLLRRLEPEFKATVDPN 126 Query 122 DIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERNK 181 DI+S+LSECLINQECEEI QI TKG MAGAEK+ ECL+RSDKENWPK L+LALEK+ +K Sbjct 127 DILSELSECLINQECEEIRQIRDTKGRMAGAEKMAECLIRSDKENWPKVLQLALEKDNSK 186 Query 182 FSELWIV 188 FSELWIV Sbjct 187 FSELWIV 193
>6bzh_D D Probable ATP-dependent RNA helicase DDX58
Length=194 Score = 303 bits (775), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 143/187 (76%), Positives = 166/187 (89%), Gaps = 0/187 (0%) Query 2 TTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFL 61 T EQR++LQAF+DYI+K LDPTYILSYM+ W +EEVQYIQAEKNNKGPMEAA+LFL++L Sbjct 7 TAEQRQNLQAFRDYIKKILDPTYILSYMSSWLEDEEVQYIQAEKNNKGPMEAASLFLQYL 66 Query 62 LELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLEEYRLLLKRLQPEFKTRIIPT 121 L+LQ EGWF+ FLDAL HAGY GL EAIESWDF+KIEKLEE+RLLL+RL+PEFK + P Sbjct 67 LKLQSEGWFQAFLDALYHAGYCGLCEAIESWDFQKIEKLEEHRLLLRRLEPEFKATVDPN 126 Query 122 DIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKERNK 181 DI+S+LSECLINQECEEI QI TKG MAGAEK+ ECL+RSDKENWPK L+LALEK+ +K Sbjct 127 DILSELSECLINQECEEIRQIRDTKGRMAGAEKMAECLIRSDKENWPKVLQLALEKDNSK 186 Query 182 FSELWIV 188 FSELWIV Sbjct 187 FSELWIV 193
>5jbj_A A LGP2
Length=680 Score = 319 bits (817), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 212/687 (31%), Positives = 348/687 (51%), Gaps = 54/687 (8%) Query 245 NYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-KVVFFANQIPVY 303 YQLE PA++G+N+I+ PTG GKT ++ +C HL +G++G +V N++ + Sbjct 11 GYQLEAVAPALRGRNSIVWLPTGAGKTRAAVHVCRRHL----EGRRGGRVAVLVNKVHLV 66 Query 304 EQQKSVFSKYFE--RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 +Q K F R ++VT +SG ++ Q+ + +D++I T QIL N L G Sbjct 67 QQH---LEKEFHVLRDAFKVTAVSGDSSHKCFFGQLAKGSDVVICTAQILQNALLSGEEE 123 Query 362 S---LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418 + L+ F+L++ DECH+T K+ YN IM +YL +KL G LPQ++GLTAS G G Sbjct 124 ARVELTDFSLLVIDECHHTQKEAVYNKIMLSYLQKKLSGQR-DLPQILGLTASPGTGGET 182 Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQL 478 + + A+++I ++CA+LD VIA+ R D F + ++ Sbjct 183 SFEGAVEHILQICANLDTEVIASAXXXXXXXXXXXXXXXXXXXXXXXREQDPFGQRLKKI 242 Query 479 MRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKAL 538 M +I + +E QN FGTQ YEQ IV ++ ++ E R C+ Sbjct 243 M-------AQIQEHMEMPELPQN--FGTQVYEQRIV---------ELENRAAE-RFCRKT 283 Query 539 FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELE 598 + HLR+YNDAL+I++ RM DA L+ F+++ + D E+ L FEE L+ Sbjct 284 RVCALHLRRYNDALLINDTVRMMDAFQCLQQFYAD-KXXXXDPTERFLATTFEENRATLQ 342 Query 599 SVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKL--SFL 656 +++ D NP+L L ILQE + + I+F KTR +L +W++ L + Sbjct 343 ALAGDQRYXNPRLSKLEEILQEHFQPPGSSRGIVFTKTRQSAHSLLSWLQDTAGLCGQHI 402 Query 657 KPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYE 716 + +LTG G +NQ GMT Q+ ++ F+ G+ N+L +TSVA+EG+DI +CN+V+ Y Sbjct 403 RAAVLTGSGHSNQAKGMTQNEQQDVITLFR-YGELNLLFSTSVAEEGLDIPECNIVVRYG 461 Query 717 YVGNVIKMIQTRGRGRARGSKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAV 775 + N I M+Q +GR RA+ S +L +N +M +I +Q E Sbjct 462 LMTNEIAMVQAQGRARAQNSMYSVLAKANXXXXXXXXXXXXXXXLMERAIRAVQAMPERK 521 Query 776 FREKILHIQTHE------KFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEEC 829 +R KI+ +Q + K R S+ + PD + C C C +D+R +E Sbjct 522 YRLKIVELQRNAVLSWQVKEARSSERRQLHDPD--DVYFHCVNCNVAVCRGSDIRTVEAM 579 Query 830 HYTVLGDAFKECFV---SRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPV 886 H+ + F+ + + H + + F +E +I C+ C +WG+ + Y+ +P+ Sbjct 580 HHVNINPNFRFYYTVSSGKIHFE-RTFRDWEPGCRIVCS--ECRQEWGMEMIYRNVTLPI 636 Query 887 IKIESFVVEDIATGVQTLYSKWKDFHF 913 + I++FVV + + Y KW F Sbjct 637 LSIKNFVV--VTPDEKKKYKKWSTVTF 661
>7nga_C A Interferon-induced helicase C domain-containing protein
1 Length=1025 Score = 320 bits (820), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 232/719 (32%), Positives = 356/719 (50%), Gaps = 79/719 (11%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302 R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ + Sbjct 310 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 369 Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358 EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G Sbjct 370 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 428 Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408 LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL Sbjct 429 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGL 488 Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468 TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + +P K F Sbjct 489 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIAXXXXX 548 Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528 + FK + ++M ++ ++ +FGTQ YEQW + ++K D Sbjct 549 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 594 Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579 + + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F Sbjct 595 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNXXXXX 648 Query 580 ---------------------DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFIL 618 DE ++ L F + + L+ ++ +P KL L + Sbjct 649 XXXXXXXXXXXXXXXXXXXXLDETDEFLMNLFFDNKKMLKKLAENPKXXXEKLIKLRNTI 708 Query 619 QEEYHLNP-ETITILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTL 675 E++ + + I+F KTR AL WI N K + +K L G G +++ MT Sbjct 709 LEQFTRSEXXSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQ 768 Query 676 PAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARG 735 QK ++ F+ +G+ N+LIAT+VA+EG+DI +CN+VI Y V RA Sbjct 769 TEQKEVISKFR-TGEINLLIATTVAEEGLDIKECNIVIRYGLVTXXXXXXXXXXXARADE 827 Query 736 SKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIR 791 S L+T +E +N ++EKMM +I R+Q + KIL +Q EK ++ Sbjct 828 STYVLVTXXXXXXXXREIVNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMK 887 Query 792 DSQEKPKPVPDKENK-KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHP-K 849 + K D + LLC+ C L C ++ VIE+ H+ + FK ++ R + Sbjct 888 VKRSIAKQYNDNPSLITLLCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKXX 947 Query 850 PKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908 +I C C WG + +K ++P +KI +FVV + Y KW Sbjct 948 XXXXXXXXXNGEIIC---KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKW 1003
>7bkq_A A Isoform 2 of Interferon-induced helicase C domain-containing
protein 1 Length=714 Score = 310 bits (794), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 228/719 (32%), Positives = 351/719 (49%), Gaps = 79/719 (11%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-QKGKVVFFANQIPV 302 R YQ+E+A PA+ GKN IIC PTG GKT V++ I + HL K Q + GKV+ N++ + Sbjct 4 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 63 Query 303 YEQQ-KSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN---NLKKG 358 EQ + F+ Y ++ YR+ G+SG T + ++V++ D+II T QIL N NL+ G Sbjct 64 AEQLFRKEFNPYLKK-WYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLNLESG 122 Query 359 TIPS--LSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGS--------SGPLPQVIGL 408 LS F+L+I DECH+T+K+ YN IM YL QKL + + PLPQ++GL Sbjct 123 DDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQILGL 182 Query 409 TASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRIS 468 TAS GVG AK EA +I +CA+LDA I TVK NL +L+ + F Sbjct 183 TASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKXXXXKFVIAXXXXX 242 Query 469 DKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDK 528 + FK + ++M ++ ++ +FGTQ YEQW + ++K D Sbjct 243 NPFKEKLLEIMASIQTYCQKSPMS----------DFGTQHYEQWAIQMEKKA----AKDG 288 Query 529 DEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGF--------- 579 + + R+C HLRKYN+AL I++ RM DA +L+ F+++ + F Sbjct 289 NRKDRVC------AEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNDXXXX 342 Query 580 ---------------------DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFIL 618 DE ++ L F + + L+ ++ +P KL L + Sbjct 343 XXXXXXXXXXXXXXXXXXXKLDETDEFLMNLFFDNKKMLKKLAENPXXXXEKLIKLRNTI 402 Query 619 QEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQNTGMTL 675 E++ + + I+F KTR AL WI N K + +K L G G +++ MT Sbjct 403 LEQFTRSXXSSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQ 462 Query 676 PAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARG 735 QK ++ F+ +G+ N+LIAT+VA+EG+DI +CN+VI Y Sbjct 463 TEQKEVISKFR-TGEINLLIATTVAEEGLDIKECNIVIRYGLXXXXXXXXXXXXXXXXXX 521 Query 736 SKCFLLT-SNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTH---EKFIR 791 S L+T E+E +N ++EKMM +I R+Q + KIL +Q EK ++ Sbjct 522 STYVLVTXXXXXXXEREIVNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMK 581 Query 792 DSQEKPKPVPDKENK-KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHP-K 849 + K D + LLC+ C L C ++ VIE+ H+ + FK ++ R + Sbjct 582 VKRSIAKQYNDNPSLITLLCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKXX 641 Query 850 PKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908 +I C C WG + +K ++P +KI +FVV + Y KW Sbjct 642 XXXXXXXXXNGEIIC---KCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKW 697
>2rmj_A A Probable ATP-dependent RNA helicase DDX58
Length=134 Score = 285 bits (730), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 134/134 (100%), Positives = 134/134 (100%), Gaps = 0/134 (0%) Query 792 DSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPK 851 DSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPK Sbjct 1 DSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPK 60 Query 852 QFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDF 911 QFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDF Sbjct 61 QFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDF 120 Query 912 HFEKIPFDPAEMSK 925 HFEKIPFDPAEMSK Sbjct 121 HFEKIPFDPAEMSK 134
>3og8_B B Antiviral innate immune response receptor RIG-I
Length=128 Score = 262 bits (669), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 123/124 (99%), Positives = 123/124 (99%), Gaps = 0/124 (0%) Query 802 DKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAK 861 DKENKKLLCRKCKALACYTADVRVIEE HYTVLGDAFKECFVSRPHPKPKQFSSFEKRAK Sbjct 2 DKENKKLLCRKCKALACYTADVRVIEESHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAK 61 Query 862 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA 921 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA Sbjct 62 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA 121 Query 922 EMSK 925 EMSK Sbjct 122 EMSK 125
>7bah_B B Antiviral innate immune response receptor RIG-I
Length=127 Score = 261 bits (667), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 122/122 (100%), Positives = 122/122 (100%), Gaps = 0/122 (0%) Query 802 DKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAK 861 DKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAK Sbjct 4 DKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAK 63 Query 862 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA 921 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA Sbjct 64 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA 123 Query 922 EM 923 EM Sbjct 124 EM 125
>3og8_A A Antiviral innate immune response receptor RIG-I
Length=128 Score = 259 bits (663), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 122/123 (99%), Positives = 122/123 (99%), Gaps = 0/123 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEE HYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 3 KENKKLLCRKCKALACYTADVRVIEESHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 62 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 63 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 122 Query 923 MSK 925 MSK Sbjct 123 MSK 125
>7mk1_B B Antiviral innate immune response receptor RIG-I
Length=125 Score = 259 bits (662), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 3 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 62 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 63 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 122 Query 923 M 923 M Sbjct 123 M 123
>7mk1_A A Antiviral innate immune response receptor RIG-I
Length=125 Score = 259 bits (662), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 3 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 62 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 63 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 122 Query 923 M 923 M Sbjct 123 M 123
>7bah_A A Antiviral innate immune response receptor RIG-I
Length=127 Score = 259 bits (662), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 5 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 64 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 65 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 124 Query 923 M 923 M Sbjct 125 M 125
>7bai_B B Antiviral innate immune response receptor RIG-I
Length=127 Score = 259 bits (661), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 802 DKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAK 861 DKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAK Sbjct 4 DKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAK 63 Query 862 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA 921 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA Sbjct 64 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA 123 Query 922 E 922 E Sbjct 124 E 124
>2qfd_A A Probable ATP-dependent RNA helicase DDX58
Length=145 Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142 Query 923 M 923 M Sbjct 143 M 143
>2qfb_J J Probable ATP-dependent RNA helicase DDX58
Length=145 Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142 Query 923 M 923 M Sbjct 143 M 143
>2qfb_I I Probable ATP-dependent RNA helicase DDX58
Length=145 Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142 Query 923 M 923 M Sbjct 143 M 143
>2qfb_H H Probable ATP-dependent RNA helicase DDX58
Length=145 Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142 Query 923 M 923 M Sbjct 143 M 143
>2qfb_G G Probable ATP-dependent RNA helicase DDX58
Length=145 Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142 Query 923 M 923 M Sbjct 143 M 143
>2qfb_F F Probable ATP-dependent RNA helicase DDX58
Length=145 Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142 Query 923 M 923 M Sbjct 143 M 143
>2qfb_E E Probable ATP-dependent RNA helicase DDX58
Length=145 Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142 Query 923 M 923 M Sbjct 143 M 143
>2qfb_D D Probable ATP-dependent RNA helicase DDX58
Length=145 Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142 Query 923 M 923 M Sbjct 143 M 143
>2qfb_C C Probable ATP-dependent RNA helicase DDX58
Length=145 Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142 Query 923 M 923 M Sbjct 143 M 143
>2qfd_J J Probable ATP-dependent RNA helicase DDX58
Length=145 Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142 Query 923 M 923 M Sbjct 143 M 143
>2qfd_I I Probable ATP-dependent RNA helicase DDX58
Length=145 Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142 Query 923 M 923 M Sbjct 143 M 143
>2qfd_H H Probable ATP-dependent RNA helicase DDX58
Length=145 Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142 Query 923 M 923 M Sbjct 143 M 143
>2qfd_G G Probable ATP-dependent RNA helicase DDX58
Length=145 Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142 Query 923 M 923 M Sbjct 143 M 143
>2qfd_B B Probable ATP-dependent RNA helicase DDX58
Length=145 Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142 Query 923 M 923 M Sbjct 143 M 143
>2qfd_F F Probable ATP-dependent RNA helicase DDX58
Length=145 Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142 Query 923 M 923 M Sbjct 143 M 143
>2qfd_E E Probable ATP-dependent RNA helicase DDX58
Length=145 Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142 Query 923 M 923 M Sbjct 143 M 143
>2qfd_D D Probable ATP-dependent RNA helicase DDX58
Length=145 Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142 Query 923 M 923 M Sbjct 143 M 143
>2qfd_C C Probable ATP-dependent RNA helicase DDX58
Length=145 Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142 Query 923 M 923 M Sbjct 143 M 143
>2qfb_B B Probable ATP-dependent RNA helicase DDX58
Length=145 Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142 Query 923 M 923 M Sbjct 143 M 143
>2qfb_A A Probable ATP-dependent RNA helicase DDX58
Length=145 Score = 259 bits (662), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 23 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 82 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 83 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 142 Query 923 M 923 M Sbjct 143 M 143
>7bai_A A Antiviral innate immune response receptor RIG-I
Length=127 Score = 258 bits (658), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 120/120 (100%), Positives = 120/120 (100%), Gaps = 0/120 (0%) Query 804 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIF 863 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIF Sbjct 6 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIF 65 Query 864 CARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM 923 CARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM Sbjct 66 CARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM 125
>3ncu_B B RIG-I
Length=134 Score = 258 bits (658), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 120/120 (100%), Positives = 120/120 (100%), Gaps = 0/120 (0%) Query 804 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIF 863 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIF Sbjct 13 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIF 72 Query 864 CARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM 923 CARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM Sbjct 73 CARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM 132
>3ncu_A A RIG-I
Length=134 Score = 258 bits (658), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 120/120 (100%), Positives = 120/120 (100%), Gaps = 0/120 (0%) Query 804 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIF 863 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIF Sbjct 13 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIF 72 Query 864 CARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM 923 CARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM Sbjct 73 CARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEM 132
>3lrr_B B Probable ATP-dependent RNA helicase DDX58
Length=121 Score = 256 bits (653), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 120/121 (99%), Positives = 120/121 (99%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEE HYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 1 KENKKLLCRKCKALACYTADVRVIEESHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 60 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 61 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 120 Query 923 M 923 M Sbjct 121 M 121
>3lrr_A A Probable ATP-dependent RNA helicase DDX58
Length=121 Score = 256 bits (653), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 120/121 (99%), Positives = 120/121 (99%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEE HYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 1 KENKKLLCRKCKALACYTADVRVIEESHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 60 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 61 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 120 Query 923 M 923 M Sbjct 121 M 121
>3lrn_A A Probable ATP-dependent RNA helicase DDX58
Length=121 Score = 256 bits (653), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 120/121 (99%), Positives = 120/121 (99%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEE HYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 1 KENKKLLCRKCKALACYTADVRVIEESHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 60 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 61 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 120 Query 923 M 923 M Sbjct 121 M 121
>3lrn_B B Probable ATP-dependent RNA helicase DDX58
Length=121 Score = 256 bits (653), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 120/121 (99%), Positives = 120/121 (99%), Gaps = 0/121 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEE HYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 1 KENKKLLCRKCKALACYTADVRVIEESHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 60 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 922 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE Sbjct 61 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE 120 Query 923 M 923 M Sbjct 121 M 121
>7bai_E E Antiviral innate immune response receptor RIG-I
Length=127 Score = 255 bits (651), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 119/119 (100%), Positives = 119/119 (100%), Gaps = 0/119 (0%) Query 803 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 862 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI Sbjct 5 KENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKI 64 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA 921 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA Sbjct 65 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPA 123
>8t5s_A A Dicer-related helicase
Length=1091 Score = 256 bits (653), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 212/734 (29%), Positives = 350/734 (48%), Gaps = 79/734 (11%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSL-LICEHHLKKFPQGQKGKVVFFANQIPV 302 RNYQ EL A++GKNTI+ APTG GKT ++ +I EH + +G++ K +F + Sbjct 348 RNYQEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSMI 407 Query 303 YEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVN--NLKKGTI 360 QQ + S Y + H Y I G+ +NVP ++++ D+I+ TPQ++VN N + ++ Sbjct 408 LNQQAASISSYLD-HVYHTQIIQGS--DNVPTRNVIQSKDLIVATPQMIVNLCNEHRNSL 464 Query 361 PS--------LSIFTLMIFDECHNTSKQHPYNMIM--FNYLDQKLGGSSG-PLPQVIGLT 409 LS FT++ FDECHNT K PY+ IM ++YL G LPQ+IGLT Sbjct 465 DXXSRLDQFFLSTFTIIFFDECHNTVKNSPYSNIMREYHYLKNMGNMPEGHSLPQIIGLT 524 Query 410 ASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVV-YKPQKFF---RKVES 465 AS+G GD + + +YI LCAS+D ++ VK NLEEL P K R + Sbjct 525 ASLGTGDKNDCLQVRNYIAGLCASMDVKDLSIVKDNLEELRGYSPIVPDKVLLCERSTDG 584 Query 466 RISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMV--F 523 I F + +M++ E L + + ++N G F Sbjct 585 PIG-MFTNRLTLMMQEVEGLIR---------TALRNEHIGXXXXXXXXXXXXXXXXXXSF 634 Query 524 QMPDKDEE-----SRICKALFLYT-SHLRKYNDALIISEHARM----------------K 561 P D+E + +C + L + + R+ II+E + + Sbjct 635 LDPPADKEHAGYQNWVCNQMNLVSGTSFRETGTRTIINEALDVLKECFCTLSYNINFHPE 694 Query 562 DALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEE 621 AL+YLKD R F + +R+ +L S ENP + + E+ Sbjct 695 VALNYLKDEME-YRTPNFTVNMIRIWERYHNQLVGTGSA------ENPMISKTVQYIVEQ 747 Query 622 YHLNPETITILFVKTRALVDALKNWIEGNPKLSFL--KPGILTGRGKTNQNTGMTLPAQK 679 ++ TI+FV+TR L + N +L L K ++G K+ ++ +++ Sbjct 748 NLQRADSRTIIFVRTRYEATILNKVLNSNEELLMLGIKSEWMSGLNKSTASSADISASKQ 807 Query 680 CILDAFK--ASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSK 737 ++ K A G+ IL++TSVA+EG+D+ +C+LVI Y Y N I +Q RGRGRA S+ Sbjct 808 KQMEKLKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYATNEIAHVQRRGRGRALNSE 867 Query 738 CFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHE---KFIRDSQ 794 C L+T++ + ++E N KE +M+++I +Q A FR K + ++++ + +R+ Sbjct 868 CVLITNSIALRDQESNNRDKESLMSETISLIQN-SPAEFR-KCVDEESNKIWPRILREDT 925 Query 795 EKPKPVPDKENK----KLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFV-SRPHPK 849 +K + + ++ N+ K++C+KC+A+ C + D+R Y V F +R Sbjct 926 DKAQKIEEQINRNIVYKIICKKCEAILCTSKDIRS-RNTQYLVCDPGFWSLVRKTRXXXX 984 Query 850 PKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWK 909 I C R+NC G ++ T ++P + S V+ T + + KWK Sbjct 985 XXXXXXXXXTGSINCRRENCGLKLGQLIEVNTVDLPCLSALSIVLLVEGTDKRIIVKKWK 1044 Query 910 DFHFEKIPFDPAEM 923 + +K F P E+ Sbjct 1045 NI-LDKY-FTPTEI 1056
>2lwd_A A Probable ATP-dependent RNA helicase DDX58
Length=100 Score = 192 bits (488), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 96/96 (100%), Positives = 96/96 (100%), Gaps = 0/96 (0%) Query 95 KKIEKLEEYRLLLKRLQPEFKTRIIPTDIISDLSECLINQECEEILQICSTKGMMAGAEK 154 KKIEKLEEYRLLLKRLQPEFKTRIIPTDIISDLSECLINQECEEILQICSTKGMMAGAEK Sbjct 5 KKIEKLEEYRLLLKRLQPEFKTRIIPTDIISDLSECLINQECEEILQICSTKGMMAGAEK 64 Query 155 LVECLLRSDKENWPKTLKLALEKERNKFSELWIVEK 190 LVECLLRSDKENWPKTLKLALEKERNKFSELWIVEK Sbjct 65 LVECLLRSDKENWPKTLKLALEKERNKFSELWIVEK 100
>2lwe_A A Probable ATP-dependent RNA helicase DDX58
Length=100 Score = 189 bits (481), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 95/96 (99%), Positives = 95/96 (99%), Gaps = 0/96 (0%) Query 95 KKIEKLEEYRLLLKRLQPEFKTRIIPTDIISDLSECLINQECEEILQICSTKGMMAGAEK 154 KKIEKLEEYRLLLKRLQPEFKTRIIPTDIISDLSECLINQECEEILQICSTKGMMAGAEK Sbjct 5 KKIEKLEEYRLLLKRLQPEFKTRIIPTDIISDLSECLINQECEEILQICSTKGMMAGAEK 64 Query 155 LVECLLRSDKENWPKTLKLALEKERNKFSELWIVEK 190 LVECLLRSDKENWPK LKLALEKERNKFSELWIVEK Sbjct 65 LVECLLRSDKENWPKELKLALEKERNKFSELWIVEK 100
>4a2x_C C RETINOIC ACID INDUCIBLE PROTEIN I
Length=131 Score = 134 bits (336), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 63/120 (53%), Positives = 82/120 (68%), Gaps = 1/120 (1%) Query 806 KKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIFCA 865 K LLC KCKA AC T D+R+I++ H+ VLG+AFKE + ++PH KP QF FEK++K++C Sbjct 6 KNLLCGKCKAYACSTDDIRIIKDSHHIVLGEAFKERYTTKPHKKPMQFDGFEKKSKMYCR 65 Query 866 RQNCSHDWGIHVKYKTFE-IPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEMS 924 NC HDWGI VKY TF+ +PVIKI+SFV+E Q + KWK + FD EMS Sbjct 66 NNNCQHDWGITVKYLTFDNLPVIKIKSFVMESXXXXXQMDFQKWKSINSSLKNFDVEEMS 125
>4a2x_B B RETINOIC ACID INDUCIBLE PROTEIN I
Length=131 Score = 134 bits (336), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 63/120 (53%), Positives = 82/120 (68%), Gaps = 1/120 (1%) Query 806 KKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIFCA 865 K LLC KCKA AC T D+R+I++ H+ VLG+AFKE + ++PH KP QF FEK++K++C Sbjct 6 KNLLCGKCKAYACSTDDIRIIKDSHHIVLGEAFKERYTTKPHKKPMQFDGFEKKSKMYCR 65 Query 866 RQNCSHDWGIHVKYKTFE-IPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEMS 924 NC HDWGI VKY TF+ +PVIKI+SFV+E Q + KWK + FD EMS Sbjct 66 NNNCQHDWGITVKYLTFDNLPVIKIKSFVMESXXXXXQMDFQKWKSINSSLKNFDVEEMS 125
>4a2x_A A RETINOIC ACID INDUCIBLE PROTEIN I
Length=131 Score = 134 bits (336), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 63/120 (53%), Positives = 82/120 (68%), Gaps = 1/120 (1%) Query 806 KKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIFCA 865 K LLC KCKA AC T D+R+I++ H+ VLG+AFKE + ++PH KP QF FEK++K++C Sbjct 6 KNLLCGKCKAYACSTDDIRIIKDSHHIVLGEAFKERYTTKPHKKPMQFDGFEKKSKMYCR 65 Query 866 RQNCSHDWGIHVKYKTFE-IPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEMS 924 NC HDWGI VKY TF+ +PVIKI+SFV+E Q + KWK + FD EMS Sbjct 66 NNNCQHDWGITVKYLTFDNLPVIKIKSFVMESXXXXXQMDFQKWKSINSSLKNFDVEEMS 125
>4a2x_D D RETINOIC ACID INDUCIBLE PROTEIN I
Length=131 Score = 134 bits (336), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 63/120 (53%), Positives = 82/120 (68%), Gaps = 1/120 (1%) Query 806 KKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIFCA 865 K LLC KCKA AC T D+R+I++ H+ VLG+AFKE + ++PH KP QF FEK++K++C Sbjct 6 KNLLCGKCKAYACSTDDIRIIKDSHHIVLGEAFKERYTTKPHKKPMQFDGFEKKSKMYCR 65 Query 866 RQNCSHDWGIHVKYKTFE-IPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEMS 924 NC HDWGI VKY TF+ +PVIKI+SFV+E Q + KWK + FD EMS Sbjct 66 NNNCQHDWGITVKYLTFDNLPVIKIKSFVMESXXXXXQMDFQKWKSINSSLKNFDVEEMS 125
>4a2v_A A RETINOIC ACID INDUCIBLE PROTEIN I
Length=131 Score = 133 bits (334), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 63/120 (53%), Positives = 82/120 (68%), Gaps = 1/120 (1%) Query 806 KKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKPKQFSSFEKRAKIFCA 865 K LLC KCKA AC T D+R+I++ H+ VLG+AFKE + ++PH KP QF FEK++K++C Sbjct 6 KNLLCGKCKAYACSTDDIRIIKDSHHIVLGEAFKERYTTKPHKKPMQFDGFEKKSKMYCR 65 Query 866 RQNCSHDWGIHVKYKTFE-IPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAEMS 924 NC HDWGI VKY TF+ +PVIKI+SFV+E Q + KWK + FD EMS Sbjct 66 NNNCQHDWGITVKYLTFDNLPVIKIKSFVMESXXXXXQMDFQKWKSINSSLKNFDVEEMS 125
>1wp9_A A ATP-dependent RNA helicase, putative
Length=494 Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 132/515 (26%), Positives = 224/515 (43%), Gaps = 57/515 (11%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 +PR YQ E+ K N +I PTG GKT ++++I E+ L K+ GKV+ A Sbjct 8 IQPRIYQ-EVIYAKCKETNCLIVLPTGLGKTLIAMMIAEYRLTKY----GGKVLMLAPTK 62 Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQ--IVENNDIIILTPQILVNNLKKG 358 P+ Q F + F ++ ++G E P E+ +I+ TPQ + N+L G Sbjct 63 PLVLQHAESFRRLFNLPPEKIVALTG---EKSPEERSKAWARAKVIVATPQTIENDLLAG 119 Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418 I SL +L++FDE H + Y I Y Q + PL VIGLTAS G K Sbjct 120 RI-SLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQ----AKNPL--VIGLTASPGSTPEK 172 Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVE-SRISDKFKYIIAQ 477 I ++ +L I N ++ V + + +V+ I + + ++ + Sbjct 173 --------IMEVINNLGIEHIEYRSENSPDVRPYVKGIRFEWVRVDLPEIYKEVRKLLRE 224 Query 478 LMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVF--QMPDKDEESRIC 535 ++RD K L +++ K E V +A + +M + + R Sbjct 225 MLRDA-------LKPLAETGLLESSSPDIPKKE-----VLRAGQIINEEMAKGNHDLR-- 270 Query 536 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 595 L LY + K + A+ + E + Y+K + +A ++ + + +K Sbjct 271 -GLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAGSTKASKEIFSDKRMKKAI 329 Query 596 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 655 L +++ ++PK++ L I++E+ + I+F R + N Sbjct 330 SLLVQAKEIGLDHPKMDKLKEIIREQLQRKQNSKIIVFTNYRETAKKIVN--------EL 381 Query 656 LKPGI----LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNL 711 +K GI G+ QK ILD F A G+ N+L+ATSV +EG+D+ + +L Sbjct 382 VKDGIKAKRFVGQASKXXXXXXXQREQKLILDEF-ARGEFNVLVATSVGEEGLDVPEVDL 440 Query 712 VILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNA 745 V+ YE V + I+ IQ RGR GR + +L + Sbjct 441 VVFYEPVPSAIRSIQRRGRTGRHMPGRVIILMAKG 475
>1wp9_B B ATP-dependent RNA helicase, putative
Length=494 Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 132/515 (26%), Positives = 224/515 (43%), Gaps = 57/515 (11%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 +PR YQ E+ K N +I PTG GKT ++++I E+ L K+ GKV+ A Sbjct 8 IQPRIYQ-EVIYAKCKETNCLIVLPTGLGKTLIAMMIAEYRLTKY----GGKVLMLAPTK 62 Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQ--IVENNDIIILTPQILVNNLKKG 358 P+ Q F + F ++ ++G E P E+ +I+ TPQ + N+L G Sbjct 63 PLVLQHAESFRRLFNLPPEKIVALTG---EKSPEERSKAWARAKVIVATPQTIENDLLAG 119 Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418 I SL +L++FDE H + Y I Y Q + PL VIGLTAS G K Sbjct 120 RI-SLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQ----AKNPL--VIGLTASPGSTPEK 172 Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVE-SRISDKFKYIIAQ 477 I ++ +L I N ++ V + + +V+ I + + ++ + Sbjct 173 --------IMEVINNLGIEHIEYRSENSPDVRPYVKGIRFEWVRVDLPEIYKEVRKLLRE 224 Query 478 LMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVF--QMPDKDEESRIC 535 ++RD K L +++ K E V +A + +M + + R Sbjct 225 MLRDA-------LKPLAETGLLESSSPDIPKKE-----VLRAGQIINEEMAKGNHDLR-- 270 Query 536 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 595 L LY + K + A+ + E + Y+K + +A ++ + + +K Sbjct 271 -GLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAGSTKASKEIFSDKRMKKAI 329 Query 596 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 655 L +++ ++PK++ L I++E+ + I+F R + N Sbjct 330 SLLVQAKEIGLDHPKMDKLKEIIREQLQRKQNSKIIVFTNYRETAKKIVN--------EL 381 Query 656 LKPGI----LTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNL 711 +K GI G + QK ILD F A G+ N+L+ATSV +EG+D+ + +L Sbjct 382 VKDGIKAKRFVGXXXXXXXXXXSQREQKLILDEF-ARGEFNVLVATSVGEEGLDVPEVDL 440 Query 712 VILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNA 745 V+ YE V + I+ IQ RGR GR + +L + Sbjct 441 VVFYEPVPSAIRSIQRRGRTGRHMPGRVIILMAKG 475
>3b6e_A A Interferon-induced helicase C domain-containing protein
1 Length=216 Score = 119 bits (297), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 77/185 (42%), Positives = 105/185 (57%), Gaps = 20/185 (11%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHL-KKFPQGQKGKVVFFANQIPV 302 R YQ+E+A PA++GKN IIC PTG GKT V++ I + HL KK + GKV+ N++ + Sbjct 35 RPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLL 94 Query 303 YEQQKSVFSKYFE---RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 EQ +F K F+ + YRV G+SG + ++V++ DIII T QIL N+L Sbjct 95 VEQ---LFRKEFQPFLKKWYRVIGLSGXXXLKISFPEVVKSCDIIISTAQILENSLLNXX 151 Query 360 IP-----SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSG--------PLPQVI 406 LS F+L+I DEC YN IM +YL QKL + PLPQ++ Sbjct 152 XXXXXGVQLSDFSLIIIDECXXXXXXXVYNNIMRHYLMQKLKNNRLKKENKPVIPLPQIL 211 Query 407 GLTAS 411 GLTAS Sbjct 212 GLTAS 216
>1wp9_F F ATP-dependent RNA helicase, putative
Length=494 Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 132/515 (26%), Positives = 223/515 (43%), Gaps = 57/515 (11%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 +PR YQ E+ K N +I PTG GKT ++++I E+ L K+ GKV+ A Sbjct 8 IQPRIYQ-EVIYAKCKETNCLIVLPTGLGKTLIAMMIAEYRLTKY----GGKVLMLAPTK 62 Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQ--IVENNDIIILTPQILVNNLKKG 358 P+ Q F + F ++ ++G E P E+ +I+ TPQ + N+L G Sbjct 63 PLVLQHAESFRRLFNLPPEKIVALTG---EKSPEERSKAWARAKVIVATPQTIENDLLAG 119 Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418 I SL +L++FDE H + Y I Y Q + PL VIGLTAS G K Sbjct 120 RI-SLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQ----AKNPL--VIGLTASPGSTPEK 172 Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVE-SRISDKFKYIIAQ 477 I ++ +L I N ++ V + + +V+ I + + ++ + Sbjct 173 --------IMEVINNLGIEHIEYRSENSPDVRPYVKGIRFEWVRVDLPEIYKEVRKLLRE 224 Query 478 LMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVF--QMPDKDEESRIC 535 ++RD K L +++ K E V +A + +M + + R Sbjct 225 MLRDA-------LKPLAETGLLESSSPDIPKKE-----VLRAGQIINEEMAKGNHDLR-- 270 Query 536 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 595 L LY + K + A+ + E + Y+K + +A ++ + + +K Sbjct 271 -GLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAGSTKASKEIFSDKRMKKAI 329 Query 596 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 655 L +++ ++PK++ L I++E+ + I+F R + N Sbjct 330 SLLVQAKEIGLDHPKMDKLKEIIREQLQRKQNSKIIVFTNYRETAKKIVN--------EL 381 Query 656 LKPGILTGR----GKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNL 711 +K GI R QK ILD F A G+ N+L+ATSV +EG+D+ + +L Sbjct 382 VKDGIKAKRFVXXXXXXXXXXXXQREQKLILDEF-ARGEFNVLVATSVGEEGLDVPEVDL 440 Query 712 VILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNA 745 V+ YE V + I+ IQ RGR GR + +L + Sbjct 441 VVFYEPVPSAIRSIQRRGRTGRHMPGRVIILMAKG 475
>1wp9_E E ATP-dependent RNA helicase, putative
Length=494 Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 132/515 (26%), Positives = 223/515 (43%), Gaps = 57/515 (11%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 +PR YQ E+ K N +I PTG GKT ++++I E+ L K+ GKV+ A Sbjct 8 IQPRIYQ-EVIYAKCKETNCLIVLPTGLGKTLIAMMIAEYRLTKY----GGKVLMLAPTK 62 Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQ--IVENNDIIILTPQILVNNLKKG 358 P+ Q F + F ++ ++G E P E+ +I+ TPQ + N+L G Sbjct 63 PLVLQHAESFRRLFNLPPEKIVALTG---EKSPEERSKAWARAKVIVATPQTIENDLLAG 119 Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418 I SL +L++FDE H + Y I Y Q + PL VIGLTAS G K Sbjct 120 RI-SLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQ----AKNPL--VIGLTASPGSTPEK 172 Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVE-SRISDKFKYIIAQ 477 I ++ +L I N ++ V + + +V+ I + + ++ + Sbjct 173 --------IMEVINNLGIEHIEYRSENSPDVRPYVKGIRFEWVRVDLPEIYKEVRKLLRE 224 Query 478 LMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVF--QMPDKDEESRIC 535 ++RD K L +++ K E V +A + +M + + R Sbjct 225 MLRDA-------LKPLAETGLLESSSPDIPKKE-----VLRAGQIINEEMAKGNHDLR-- 270 Query 536 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 595 L LY + K + A+ + E + Y+K + +A ++ + + +K Sbjct 271 -GLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAGSTKASKEIFSDKRMKKAI 329 Query 596 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 655 L +++ ++PK++ L I++E+ + I+F R + N Sbjct 330 SLLVQAKEIGLDHPKMDKLKEIIREQLQRKQNSKIIVFTNYRETAKKIVN--------EL 381 Query 656 LKPGILTGR----GKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNL 711 +K GI R QK ILD F A G+ N+L+ATSV +EG+D+ + +L Sbjct 382 VKDGIKAKRFVXXXXXXXXXXXXQREQKLILDEF-ARGEFNVLVATSVGEEGLDVPEVDL 440 Query 712 VILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNA 745 V+ YE V + I+ IQ RGR GR + +L + Sbjct 441 VVFYEPVPSAIRSIQRRGRTGRHMPGRVIILMAKG 475
>1wp9_C C ATP-dependent RNA helicase, putative
Length=494 Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 132/515 (26%), Positives = 223/515 (43%), Gaps = 57/515 (11%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 +PR YQ E+ K N +I PTG GKT ++++I E+ L K+ GKV+ A Sbjct 8 IQPRIYQ-EVIYAKCKETNCLIVLPTGLGKTLIAMMIAEYRLTKY----GGKVLMLAPTK 62 Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQ--IVENNDIIILTPQILVNNLKKG 358 P+ Q F + F ++ ++G E P E+ +I+ TPQ + N+L G Sbjct 63 PLVLQHAESFRRLFNLPPEKIVALTG---EKSPEERSKAWARAKVIVATPQTIENDLLAG 119 Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418 I SL +L++FDE H + Y I Y Q + PL VIGLTAS G K Sbjct 120 RI-SLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQ----AKNPL--VIGLTASPGSTPEK 172 Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVE-SRISDKFKYIIAQ 477 I ++ +L I N ++ V + + +V+ I + + ++ + Sbjct 173 --------IMEVINNLGIEHIEYRSENSPDVRPYVKGIRFEWVRVDLPEIYKEVRKLLRE 224 Query 478 LMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVF--QMPDKDEESRIC 535 ++RD K L +++ K E V +A + +M + + R Sbjct 225 MLRDA-------LKPLAETGLLESSSPDIPKKE-----VLRAGQIINEEMAKGNHDLR-- 270 Query 536 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 595 L LY + K + A+ + E + Y+K + +A ++ + + +K Sbjct 271 -GLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAGSTKASKEIFSDKRMKKAI 329 Query 596 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 655 L +++ ++PK++ L I++E+ + I+F R + N Sbjct 330 SLLVQAKEIGLDHPKMDKLKEIIREQLQRKQNSKIIVFTNYRETAKKIVN--------EL 381 Query 656 LKPGILTGR----GKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNL 711 +K GI R QK ILD F A G+ N+L+ATSV +EG+D+ + +L Sbjct 382 VKDGIKAKRFVXXXXXXXXXXXXQREQKLILDEF-ARGEFNVLVATSVGEEGLDVPEVDL 440 Query 712 VILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNA 745 V+ YE V + I+ IQ RGR GR + +L + Sbjct 441 VVFYEPVPSAIRSIQRRGRTGRHMPGRVIILMAKG 475
>1wp9_D D ATP-dependent RNA helicase, putative
Length=494 Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 132/515 (26%), Positives = 223/515 (43%), Gaps = 57/515 (11%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQI 300 +PR YQ E+ K N +I PTG GKT ++++I E+ L K+ GKV+ A Sbjct 8 IQPRIYQ-EVIYAKCKETNCLIVLPTGLGKTLIAMMIAEYRLTKY----GGKVLMLAPTK 62 Query 301 PVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQ--IVENNDIIILTPQILVNNLKKG 358 P+ Q F + F ++ ++G E P E+ +I+ TPQ + N+L G Sbjct 63 PLVLQHAESFRRLFNLPPEKIVALTG---EKSPEERSKAWARAKVIVATPQTIENDLLAG 119 Query 359 TIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAK 418 I SL +L++FDE H + Y I Y Q + PL VIGLTAS G K Sbjct 120 RI-SLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQ----AKNPL--VIGLTASPGSTPEK 172 Query 419 NTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVE-SRISDKFKYIIAQ 477 I ++ +L I N ++ V + + +V+ I + + ++ + Sbjct 173 --------IMEVINNLGIEHIEYRSENSPDVRPYVKGIRFEWVRVDLPEIYKEVRKLLRE 224 Query 478 LMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVF--QMPDKDEESRIC 535 ++RD K L +++ K E V +A + +M + + R Sbjct 225 MLRDA-------LKPLAETGLLESSSPDIPKKE-----VLRAGQIINEEMAKGNHDLR-- 270 Query 536 KALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQ 595 L LY + K + A+ + E + Y+K + +A ++ + + +K Sbjct 271 -GLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAXXXKASKEIFSDKRMKKAI 329 Query 596 ELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSF 655 L +++ ++PK++ L I++E+ + I+F R + N Sbjct 330 SLLVQAKEIGLDHPKMDKLKEIIREQLQRKQNSKIIVFTNYRETAKKIVN--------EL 381 Query 656 LKPGILTGR----GKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNL 711 +K GI R QK ILD F A G+ N+L+ATSV +EG+D+ + +L Sbjct 382 VKDGIKAKRFXXXXXXXXXXXXXXREQKLILDEF-ARGEFNVLVATSVGEEGLDVPEVDL 440 Query 712 VILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNA 745 V+ YE V + I+ IQ RGR GR + +L + Sbjct 441 VVFYEPVPSAIRSIQRRGRTGRHMPGRVIILMAKG 475
>4i1s_A A Melanoma differentiation associated protein-5
Length=267 Score = 114 bits (285), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 77/228 (34%), Positives = 121/228 (53%), Gaps = 23/228 (10%) Query 503 EFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKD 562 +FGTQ YEQW++ ++K D + + R+C HL+KYN+AL I++ R D Sbjct 26 DFGTQPYEQWLIQMEKKAA----RDGNRKDRVC------AEHLKKYNEALQINDTIRRID 75 Query 563 ALDYLKDFFSNVRAAGF---------DEIEQDLTQRFEEKLQELESVSRDPSNENPKLED 613 A ++LK F+++ + F DE + L F + L+ ++ +P EN KL Sbjct 76 AYNHLKTFYNDEKEKKFEXXXXXGSLDESDIFLMTLFLRNKKILKKLAENPEYENEKLTK 135 Query 614 LCFILQEEYHLNPETIT-ILFVKTRALVDALKNWIEGNPKLS--FLKPGILTGRGKTNQN 670 L + E + E+ I+F KTR AL WI N K + +K L G G +++ Sbjct 136 LRNTIMEHFTRTEESARGIIFTKTRQSAYALSQWITDNKKFAEVGVKAHHLIGAGHSSEF 195 Query 671 TGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYV 718 MT Q+ ++ F+ +G N+LIAT+VA+EG+DI +CN+VI Y V Sbjct 196 KPMTQNEQREVISKFR-TGKINLLIATTVAEEGLDIKECNIVIRYGLV 242
>7w0e_C A Dicer-2, isoform A
Length=1722 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298 KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N Sbjct 7 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 65 Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355 + + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ + Sbjct 66 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 123 Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411 + T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT Sbjct 124 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 176 Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448 + V D K + + Y A+ V+ + H Sbjct 177 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 228 Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500 EQV+ + ++E +S I Q +R ++SL K K L N Q Sbjct 229 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 287 Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560 +E+G I+++ + F + + E+ K + + AL + E R Sbjct 288 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 335 Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614 + L+D + + +E+ + + QRF L S+ ++++PK D+ Sbjct 336 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 386 Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669 C ++FV+ R + L N+I+ P+L + L P + GR + Sbjct 387 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 432 Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727 + L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+ Sbjct 433 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 491 Query 728 RGRGRARGSKCFLLTSN 744 +GR R +K L T++ Sbjct 492 KGRARTTEAKFVLFTAD 508
>7w0f_A A Dicer-2, isoform A
Length=1722 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298 KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N Sbjct 7 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 65 Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355 + + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ + Sbjct 66 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 123 Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411 + T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT Sbjct 124 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 176 Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448 + V D K + + Y A+ V+ + H Sbjct 177 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 228 Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500 EQV+ + ++E +S I Q +R ++SL K K L N Q Sbjct 229 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 287 Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560 +E+G I+++ + F + + E+ K + + AL + E R Sbjct 288 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 335 Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614 + L+D + + +E+ + + QRF L S+ ++++PK D+ Sbjct 336 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 386 Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669 C ++FV+ R + L N+I+ P+L + L P + GR + Sbjct 387 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 432 Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727 + L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+ Sbjct 433 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 491 Query 728 RGRGRARGSKCFLLTSN 744 +GR R +K L T++ Sbjct 492 KGRARTTEAKFVLFTAD 508
>7w0d_D A Dicer-2, isoform A
Length=1722 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298 KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N Sbjct 7 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 65 Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355 + + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ + Sbjct 66 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 123 Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411 + T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT Sbjct 124 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 176 Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448 + V D K + + Y A+ V+ + H Sbjct 177 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 228 Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500 EQV+ + ++E +S I Q +R ++SL K K L N Q Sbjct 229 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 287 Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560 +E+G I+++ + F + + E+ K + + AL + E R Sbjct 288 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 335 Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614 + L+D + + +E+ + + QRF L S+ ++++PK D+ Sbjct 336 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 386 Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669 C ++FV+ R + L N+I+ P+L + L P + GR + Sbjct 387 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 432 Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727 + L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+ Sbjct 433 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 491 Query 728 RGRGRARGSKCFLLTSN 744 +GR R +K L T++ Sbjct 492 KGRARTTEAKFVLFTAD 508
>7w0d_E F Dicer-2, isoform A
Length=1722 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298 KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N Sbjct 7 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 65 Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355 + + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ + Sbjct 66 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 123 Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411 + T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT Sbjct 124 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 176 Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448 + V D K + + Y A+ V+ + H Sbjct 177 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 228 Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500 EQV+ + ++E +S I Q +R ++SL K K L N Q Sbjct 229 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 287 Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560 +E+G I+++ + F + + E+ K + + AL + E R Sbjct 288 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIR- 334 Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614 + L+D + + +E+ + + QRF L S+ ++++PK D+ Sbjct 335 HLLVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 386 Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669 C ++FV+ R + L N+I+ P+L + L P + GR + Sbjct 387 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 432 Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727 + L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+ Sbjct 433 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 491 Query 728 RGRGRARGSKCFLLTSN 744 +GR R +K L T++ Sbjct 492 KGRARTTEAKFVLFTAD 508
>7w0b_A A Dicer-2, isoform A
Length=1722 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298 KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N Sbjct 7 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 65 Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355 + + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ + Sbjct 66 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 123 Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411 + T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT Sbjct 124 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 176 Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448 + V D K + + Y A+ V+ + H Sbjct 177 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 228 Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500 EQV+ + ++E +S I Q +R ++SL K K L N Q Sbjct 229 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 287 Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560 +E+G I+++ + F + + E+ K + + AL + E R Sbjct 288 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 335 Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614 + L+D + + +E+ + + QRF L S+ ++++PK D+ Sbjct 336 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 386 Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669 C ++FV+ R + L N+I+ P+L + L P + GR + Sbjct 387 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 432 Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727 + L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+ Sbjct 433 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 491 Query 728 RGRGRARGSKCFLLTSN 744 +GR R +K L T++ Sbjct 492 KGRARTTEAKFVLFTAD 508
>8hf1_D D Dicer-2, isoform A
Length=1721 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298 KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N Sbjct 6 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 64 Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355 + + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ + Sbjct 65 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 122 Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411 + T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT Sbjct 123 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 175 Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448 + V D K + + Y A+ V+ + H Sbjct 176 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 227 Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500 EQV+ + ++E +S I Q +R ++SL K K L N Q Sbjct 228 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 286 Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560 +E+G I+++ + F + + E+ K + + AL + E R Sbjct 287 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 334 Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614 + L+D + + +E+ + + QRF L S+ ++++PK D+ Sbjct 335 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 385 Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669 C ++FV+ R + L N+I+ P+L + L P + GR + Sbjct 386 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 431 Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727 + L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+ Sbjct 432 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 490 Query 728 RGRGRARGSKCFLLTSN 744 +GR R +K L T++ Sbjct 491 KGRARTTEAKFVLFTAD 507
>8hf1_A A Dicer-2, isoform A
Length=1721 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298 KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N Sbjct 6 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 64 Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355 + + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ + Sbjct 65 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 122 Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411 + T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT Sbjct 123 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 175 Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448 + V D K + + Y A+ V+ + H Sbjct 176 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 227 Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500 EQV+ + ++E +S I Q +R ++SL K K L N Q Sbjct 228 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 286 Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560 +E+G I+++ + F + + E+ K + + AL + E R Sbjct 287 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 334 Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614 + L+D + + +E+ + + QRF L S+ ++++PK D+ Sbjct 335 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 385 Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669 C ++FV+ R + L N+I+ P+L + L P + GR + Sbjct 386 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 431 Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727 + L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+ Sbjct 432 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 490 Query 728 RGRGRARGSKCFLLTSN 744 +GR R +K L T++ Sbjct 491 KGRARTTEAKFVLFTAD 507
>8hf1_G G Dicer-2, isoform A
Length=1721 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298 KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N Sbjct 6 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 64 Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355 + + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ + Sbjct 65 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 122 Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411 + T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT Sbjct 123 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 175 Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448 + V D K + + Y A+ V+ + H Sbjct 176 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 227 Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500 EQV+ + ++E +S I Q +R ++SL K K L N Q Sbjct 228 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 286 Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560 +E+G I+++ + F + + E+ K + + AL + E R Sbjct 287 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 334 Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614 + L+D + + +E+ + + QRF L S+ ++++PK D+ Sbjct 335 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 385 Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669 C ++FV+ R + L N+I+ P+L + L P + GR + Sbjct 386 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 431 Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727 + L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+ Sbjct 432 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 490 Query 728 RGRGRARGSKCFLLTSN 744 +GR R +K L T++ Sbjct 491 KGRARTTEAKFVLFTAD 507
>8hf0_A A Dicer-2, isoform A
Length=1722 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298 KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N Sbjct 7 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 65 Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355 + + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ + Sbjct 66 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 123 Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411 + T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT Sbjct 124 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 176 Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448 + V D K + + Y A+ V+ + H Sbjct 177 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 228 Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500 EQV+ + ++E +S I Q +R ++SL K K L N Q Sbjct 229 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 287 Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560 +E+G I+++ + F + + E+ K + + AL + E R Sbjct 288 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 335 Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614 + L+D + + +E+ + + QRF L S+ ++++PK D+ Sbjct 336 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 386 Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669 C ++FV+ R + L N+I+ P+L + L P + GR + Sbjct 387 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 432 Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727 + L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+ Sbjct 433 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 491 Query 728 RGRGRARGSKCFLLTSN 744 +GR R +K L T++ Sbjct 492 KGRARTTEAKFVLFTAD 508
>8hf0_D D Dicer-2, isoform A
Length=1722 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298 KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N Sbjct 7 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 65 Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355 + + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ + Sbjct 66 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 123 Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411 + T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT Sbjct 124 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 176 Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448 + V D K + + Y A+ V+ + H Sbjct 177 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 228 Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500 EQV+ + ++E +S I Q +R ++SL K K L N Q Sbjct 229 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 287 Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560 +E+G I+++ + F + + E+ K + + AL + E R Sbjct 288 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 335 Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614 + L+D + + +E+ + + QRF L S+ ++++PK D+ Sbjct 336 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 386 Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669 C ++FV+ R + L N+I+ P+L + L P + GR + Sbjct 387 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 432 Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727 + L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+ Sbjct 433 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 491 Query 728 RGRGRARGSKCFLLTSN 744 +GR R +K L T++ Sbjct 492 KGRARTTEAKFVLFTAD 508
>7w0c_A A Dicer-2, isoform A
Length=1722 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298 KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N Sbjct 7 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 65 Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355 + + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ + Sbjct 66 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 123 Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411 + T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT Sbjct 124 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 176 Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448 + V D K + + Y A+ V+ + H Sbjct 177 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 228 Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500 EQV+ + ++E +S I Q +R ++SL K K L N Q Sbjct 229 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 287 Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560 +E+G I+++ + F + + E+ K + + AL + E R Sbjct 288 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 335 Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614 + L+D + + +E+ + + QRF L S+ ++++PK D+ Sbjct 336 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 386 Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669 C ++FV+ R + L N+I+ P+L + L P + GR + Sbjct 387 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 432 Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727 + L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+ Sbjct 433 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 491 Query 728 RGRGRARGSKCFLLTSN 744 +GR R +K L T++ Sbjct 492 KGRARTTEAKFVLFTAD 508
>7w0a_H E Dicer-2, isoform A
Length=1722 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298 KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N Sbjct 7 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 65 Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355 + + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ + Sbjct 66 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 123 Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411 + T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT Sbjct 124 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 176 Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448 + V D K + + Y A+ V+ + H Sbjct 177 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 228 Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500 EQV+ + ++E +S I Q +R ++SL K K L N Q Sbjct 229 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 287 Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560 +E+G I+++ + F + + E+ K + + AL + E R Sbjct 288 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 335 Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614 + L+D + + +E+ + + QRF L S+ ++++PK D+ Sbjct 336 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 386 Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669 C ++FV+ R + L N+I+ P+L + L P + GR + Sbjct 387 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 432 Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727 + L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+ Sbjct 433 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 491 Query 728 RGRGRARGSKCFLLTSN 744 +GR R +K L T++ Sbjct 492 KGRARTTEAKFVLFTAD 508
>7w0a_A A Dicer-2, isoform A
Length=1722 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 133/557 (24%), Positives = 236/557 (42%), Gaps = 109/557 (20%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFAN 298 KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N Sbjct 7 KPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCN 65 Query 299 QIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNL 355 + + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ + Sbjct 66 TVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMV 123 Query 356 KKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS-- 411 + T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT Sbjct 124 TQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLI 176 Query 412 -----------------------VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEE 448 + V D K + + Y A+ V+ + H Sbjct 177 KGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLY-----ATKPTEVMVSFPHQ--- 228 Query 449 LEQVVYKPQKFFRKVES-RISDKFKYIIAQLMRDTESL-------AKRICKDLENLSQIQ 500 EQV+ + ++E +S I Q +R ++SL K K L N Q Sbjct 229 -EQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQ 287 Query 501 NREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARM 560 +E+G I+++ + F + + E+ K + + AL + E R Sbjct 288 MKEYGIYAASIAIISL---IVEFDIKRRQAETLSVKLM---------HRTALTLCEKIRH 335 Query 561 KDALDYLKD--FFSNVRAAGFDEIEQDLT----QRFEEKLQELESVSRDPSNENPKLEDL 614 + L+D + + +E+ + + QRF L S+ ++++PK D+ Sbjct 336 L-LVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRF------LMSLKVSFADKDPK--DI 386 Query 615 CFILQEEYHLNPETITILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQ 669 C ++FV+ R + L N+I+ P+L + L P + GR + Sbjct 387 C--------------CLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISP 432 Query 670 NTGMTLPA--QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 727 + L QK + F+ G+ N++I +SV +EGID+ CN V + + V +Q+ Sbjct 433 DFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQS 491 Query 728 RGRGRARGSKCFLLTSN 744 +GR R +K L T++ Sbjct 492 KGRARTTEAKFVLFTAD 508
>7eld_A A Endoribonuclease Dicer homolog 1
Length=1909 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/220 (30%), Positives = 114/220 (52%), Gaps = 12/220 (5%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEH-HLKKFPQGQKGKVVFFANQIP- 301 R YQL++ L K KNTI TG GKT +++L+ + H Q +K VF ++P Sbjct 250 RRYQLDV-LEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPL 308 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VY+Q + + ++ + G+ + ++ ++ E+ ++++T QIL+N L+ I Sbjct 309 VYQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVMTAQILLNILRHSII- 367 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTAS-VGV-GDAKN 419 + L+I DECH+ K+HPY+++M + P + G+TAS V + G + Sbjct 368 RMETIDLLILDECHHAVKKHPYSLVMSEFYHTT---PKDKRPAIFGMTASPVNLKGVSSQ 424 Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKF 459 D A+ I L LD S + T+K + +ELE+ V P + Sbjct 425 VDCAIK-IRNLETKLD-STVCTIK-DRKELEKHVPMPSEI 461 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 4/118 (3%) Query 630 TILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASG 689 I+FV+ L P LSF++ + G N + M + + F+ G Sbjct 667 AIVFVERVVAALVLPKVFAELPSLSFIRCASMIGH---NNSQEMKSSQMQDTISKFR-DG 722 Query 690 DHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGV 747 +L+ATSVA+EG+DI QCN+V+ ++ V+ IQ+RGR R GS L+ V Sbjct 723 HVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNV 780
>7ele_A A Endoribonuclease Dicer homolog 1
Length=1909 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/220 (30%), Positives = 114/220 (52%), Gaps = 12/220 (5%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEH-HLKKFPQGQKGKVVFFANQIP- 301 R YQL++ L K KNTI TG GKT +++L+ + H Q +K VF ++P Sbjct 250 RRYQLDV-LEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPL 308 Query 302 VYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 VY+Q + + ++ + G+ + ++ ++ E+ ++++T QIL+N L+ I Sbjct 309 VYQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVMTAQILLNILRHSII- 367 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTAS-VGV-GDAKN 419 + L+I DECH+ K+HPY+++M + P + G+TAS V + G + Sbjct 368 RMETIDLLILDECHHAVKKHPYSLVMSEFYHTT---PKDKRPAIFGMTASPVNLKGVSSQ 424 Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKF 459 D A+ I L LD S + T+K + +ELE+ V P + Sbjct 425 VDCAIK-IRNLETKLD-STVCTIK-DRKELEKHVPMPSEI 461 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 4/118 (3%) Query 630 TILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASG 689 I+FV+ L P LSF++ + G N + M + + F+ G Sbjct 667 AIVFVERVVAALVLPKVFAELPSLSFIRCASMIGH---NNSQEMKSSQMQDTISKFR-DG 722 Query 690 DHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGV 747 +L+ATSVA+EG+DI QCN+V+ ++ V+ IQ+RGR R GS L+ V Sbjct 723 HVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNV 780
>7xw3_A A Endoribonuclease Dicer
Length=1922 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 14/199 (7%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICE---HHLKKFPQGQKGKVVFFA 297 + PR YQ+EL L A NTI+C TG GKTF+++L+ + + ++ + VF Sbjct 42 YTPRKYQVEL-LEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLV 100 Query 298 NQIPVYEQQKSVFSKYFERHGYRVTGIS-GATAENVPVEQIVENNDIIILTPQILVNNLK 356 N QQ S + + + + A+ Q + ++I+T + +N LK Sbjct 101 NSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLK 160 Query 357 KGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASV--GV 414 G + SLS L++FDECH HPY IM KL + P+++GLTAS+ G Sbjct 161 NGYL-SLSDINLLVFDECHLAILDHPYREIM------KLCENCPSCPRILGLTASILNGK 213 Query 415 GDAKNTDEALDYICKLCAS 433 D + +E + + K+ S Sbjct 214 CDPEELEEKIQKLEKILKS 232 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 13/145 (9%) Query 631 ILFVKTRALVDALKNWIE----GNPKLSFLKPGILTGRG-KTNQNTGMTLPA----QKCI 681 I+FV+ R L I+ +P+L+++ +TG G NQ + A Q+ + Sbjct 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQMEAEFRKQEEV 504 Query 682 LDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL 741 L F+A + N+LIATS+ +EG+DI +CNLV+ ++ +Q++GR RA S +L Sbjct 505 LRKFRAH-ETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563 Query 742 TSNAGVIE-KEQINMYK--EKMMND 763 + +E + YK EK++ + Sbjct 564 ADTDKIKSFEEDLKTYKAIEKILRN 588
>5zam_A A Endoribonuclease Dicer
Length=1922 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 94/196 (48%), Gaps = 14/196 (7%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICE---HHLKKFPQGQKGKVVFFANQI 300 R YQ+EL L A NTI+C TG GKTF+++L+ + + ++ + VF N Sbjct 45 RKYQVEL-LEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSA 103 Query 301 PVYEQQKSVFSKYFERHGYRVTGIS-GATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 QQ S + + + + A+ Q + ++I+T + +N LK G Sbjct 104 NQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNGY 163 Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASV--GVGDA 417 + SLS L++FDECH HPY IM KL + P+++GLTAS+ G D Sbjct 164 L-SLSDINLLVFDECHLAILDHPYREIM------KLCENCPSCPRILGLTASILNGKCDP 216 Query 418 KNTDEALDYICKLCAS 433 + +E + + K+ S Sbjct 217 EELEEKIQKLEKILKS 232 Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 13/145 (9%) Query 631 ILFVKTRALVDALKNWIE----GNPKLSFLKPGILTGRG-KTNQNTGMTLPA----QKCI 681 I+FV+ R L I+ +P+L+++ +TG G NQ + A Q+ + Sbjct 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQMEAEFRKQEEV 504 Query 682 LDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL 741 L F+A + N+LIATS+ +EG+DI +CNLV+ ++ +Q++GR RA S +L Sbjct 505 LRKFRAH-ETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563 Query 742 TSNAGVIE-KEQINMYK--EKMMND 763 + +E + YK EK++ + Sbjct 564 ADTDKIKSFEEDLKTYKAIEKILRN 588
>5zal_A A Endoribonuclease Dicer
Length=1922 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 94/196 (48%), Gaps = 14/196 (7%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICE---HHLKKFPQGQKGKVVFFANQI 300 R YQ+EL L A NTI+C TG GKTF+++L+ + + ++ + VF N Sbjct 45 RKYQVEL-LEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSA 103 Query 301 PVYEQQKSVFSKYFERHGYRVTGIS-GATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 QQ S + + + + A+ Q + ++I+T + +N LK G Sbjct 104 NQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNGY 163 Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASV--GVGDA 417 + SLS L++FDECH HPY IM KL + P+++GLTAS+ G D Sbjct 164 L-SLSDINLLVFDECHLAILDHPYREIM------KLCENCPSCPRILGLTASILNGKCDP 216 Query 418 KNTDEALDYICKLCAS 433 + +E + + K+ S Sbjct 217 EELEEKIQKLEKILKS 232 Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 13/145 (9%) Query 631 ILFVKTRALVDALKNWIE----GNPKLSFLKPGILTGRG-KTNQNTGMTLPA----QKCI 681 I+FV+ R L I+ +P+L+++ +TG G NQ + A Q+ + Sbjct 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQMEAEFRKQEEV 504 Query 682 LDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL 741 L F+A + N+LIATS+ +EG+DI +CNLV+ ++ +Q++GR RA S +L Sbjct 505 LRKFRAH-ETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563 Query 742 TSNAGVIE-KEQINMYK--EKMMND 763 + +E + YK EK++ + Sbjct 564 ADTDKIKSFEEDLKTYKAIEKILRN 588
>5zak_A A Endoribonuclease Dicer
Length=1922 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 94/196 (48%), Gaps = 14/196 (7%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICE---HHLKKFPQGQKGKVVFFANQI 300 R YQ+EL L A NTI+C TG GKTF+++L+ + + ++ + VF N Sbjct 45 RKYQVEL-LEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSA 103 Query 301 PVYEQQKSVFSKYFERHGYRVTGIS-GATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 QQ S + + + + A+ Q + ++I+T + +N LK G Sbjct 104 NQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNGY 163 Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASV--GVGDA 417 + SLS L++FDECH HPY IM KL + P+++GLTAS+ G D Sbjct 164 L-SLSDINLLVFDECHLAILDHPYREIM------KLCENCPSCPRILGLTASILNGKCDP 216 Query 418 KNTDEALDYICKLCAS 433 + +E + + K+ S Sbjct 217 EELEEKIQKLEKILKS 232 Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 13/145 (9%) Query 631 ILFVKTRALVDALKNWIE----GNPKLSFLKPGILTGRG-KTNQNTGMTLPA----QKCI 681 I+FV+ R L I+ +P+L+++ +TG G NQ + A Q+ + Sbjct 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQMEAEFRKQEEV 504 Query 682 LDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL 741 L F+A + N+LIATS+ +EG+DI +CNLV+ ++ +Q++GR RA S +L Sbjct 505 LRKFRAH-ETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563 Query 742 TSNAGVIE-KEQINMYK--EKMMND 763 + +E + YK EK++ + Sbjct 564 ADTDKIKSFEEDLKTYKAIEKILRN 588
>7yym_A A Endoribonuclease Dicer
Length=2004 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 55/174 (32%), Positives = 83/174 (48%), Gaps = 12/174 (7%) Query 246 YQLELALPAMKGKNTIICAPTGCGKTFVSLLICE---HHLKKFPQGQKGKVVFFANQIPV 302 YQ+EL L A NTI+C TG GKTF+++L+ + H ++ + VF N Sbjct 100 YQVEL-LEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKRTVFLVNSANQ 158 Query 303 YEQQKSVFSKYFERHGYRVTGIS-GATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 QQ S + + + + A+ Q + ++I+T + + LK G + Sbjct 159 VAQQVSAVRTHSDLKVGEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLKNGYL- 217 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 415 SLS L++FDECH HPY IM KL S P+++GLTAS+ G Sbjct 218 SLSDINLLVFDECHLAILDHPYREIM------KLCESCPSCPRILGLTASILNG 265 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 40/145 (28%), Positives = 70/145 (48%), Gaps = 13/145 (9%) Query 631 ILFVKTRALVDALKNWIE----GNPKLSFLKPGILTGRGKTNQNTGMT-----LPAQKCI 681 I+FV+ R L I+ +P+L+++ +T Q+ + Sbjct 498 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITXXXXXXXXXXXXXXXXEFRKQEEV 557 Query 682 LDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL 741 L F+A + N+LIATSV +EG+DI +CNLV+ ++ +Q++GR RA S +L Sbjct 558 LRKFRAH-ETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVML 616 Query 742 TSNAGVIE-KEQINMYK--EKMMND 763 + +E + YK EK++ + Sbjct 617 ADTDKIKSFEEDLKTYKAIEKILRN 641
>7yz4_A A Endoribonuclease Dicer
Length=2004 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 55/174 (32%), Positives = 83/174 (48%), Gaps = 12/174 (7%) Query 246 YQLELALPAMKGKNTIICAPTGCGKTFVSLLICE---HHLKKFPQGQKGKVVFFANQIPV 302 YQ+EL L A NTI+C TG GKTF+++L+ + H ++ + VF N Sbjct 100 YQVEL-LEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKRTVFLVNSANQ 158 Query 303 YEQQKSVFSKYFERHGYRVTGIS-GATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 QQ S + + + + A+ Q + ++I+T + + LK G + Sbjct 159 VAQQVSAVRTHSDLKVGEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLKNGYL- 217 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 415 SLS L++FDECH HPY IM KL S P+++GLTAS+ G Sbjct 218 SLSDINLLVFDECHLAILDHPYREIM------KLCESCPSCPRILGLTASILNG 265 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 40/145 (28%), Positives = 70/145 (48%), Gaps = 13/145 (9%) Query 631 ILFVKTRALVDALKNWIE----GNPKLSFLKPGILTGRGKTNQNTGMT-----LPAQKCI 681 I+FV+ R L I+ +P+L+++ +T Q+ + Sbjct 498 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITXXXXXXXXXXXXXXXXEFRKQEEV 557 Query 682 LDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL 741 L F+A + N+LIATSV +EG+DI +CNLV+ ++ +Q++GR RA S +L Sbjct 558 LRKFRAH-ETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVML 616 Query 742 TSNAGVIE-KEQINMYK--EKMMND 763 + +E + YK EK++ + Sbjct 617 ADTDKIKSFEEDLKTYKAIEKILRN 641
>7zpj_A A Endoribonuclease Dicer
Length=2004 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 55/174 (32%), Positives = 83/174 (48%), Gaps = 12/174 (7%) Query 246 YQLELALPAMKGKNTIICAPTGCGKTFVSLLICE---HHLKKFPQGQKGKVVFFANQIPV 302 YQ+EL L A NTI+C TG GKTF+++L+ + H ++ + VF N Sbjct 100 YQVEL-LEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKRTVFLVNSANQ 158 Query 303 YEQQKSVFSKYFERHGYRVTGIS-GATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 QQ S + + + + A+ Q + ++I+T + + LK G + Sbjct 159 VAQQVSAVRTHSDLKVGEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLKNGYL- 217 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 415 SLS L++FDECH HPY IM KL S P+++GLTAS+ G Sbjct 218 SLSDINLLVFDECHLAILDHPYREIM------KLCESCPSCPRILGLTASILNG 265 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 40/145 (28%), Positives = 70/145 (48%), Gaps = 13/145 (9%) Query 631 ILFVKTRALVDALKNWIE----GNPKLSFLKPGILTGRGKTNQNTGMT-----LPAQKCI 681 I+FV+ R L I+ +P+L+++ +T Q+ + Sbjct 498 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITXXXXXXXXXXXXXXXXEFRKQEEV 557 Query 682 LDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL 741 L F+A + N+LIATSV +EG+DI +CNLV+ ++ +Q++GR RA S +L Sbjct 558 LRKFRAH-ETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVML 616 Query 742 TSNAGVIE-KEQINMYK--EKMMND 763 + +E + YK EK++ + Sbjct 617 ADTDKIKSFEEDLKTYKAIEKILRN 641
>7zpk_A A Endoribonuclease Dicer
Length=2004 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 55/174 (32%), Positives = 83/174 (48%), Gaps = 12/174 (7%) Query 246 YQLELALPAMKGKNTIICAPTGCGKTFVSLLICE---HHLKKFPQGQKGKVVFFANQIPV 302 YQ+EL L A NTI+C TG GKTF+++L+ + H ++ + VF N Sbjct 100 YQVEL-LEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKRTVFLVNSANQ 158 Query 303 YEQQKSVFSKYFERHGYRVTGIS-GATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 QQ S + + + + A+ Q + ++I+T + + LK G + Sbjct 159 VAQQVSAVRTHSDLKVGEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLKNGYL- 217 Query 362 SLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 415 SLS L++FDECH HPY IM KL S P+++GLTAS+ G Sbjct 218 SLSDINLLVFDECHLAILDHPYREIM------KLCESCPSCPRILGLTASILNG 265 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 40/145 (28%), Positives = 70/145 (48%), Gaps = 13/145 (9%) Query 631 ILFVKTRALVDALKNWIE----GNPKLSFLKPGILTGRGKTNQNTGMT-----LPAQKCI 681 I+FV+ R L I+ +P+L+++ +T Q+ + Sbjct 498 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITXXXXXXXXXXXXXXXXEFRKQEEV 557 Query 682 LDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL 741 L F+A + N+LIATSV +EG+DI +CNLV+ ++ +Q++GR RA S +L Sbjct 558 LRKFRAH-ETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVML 616 Query 742 TSNAGVIE-KEQINMYK--EKMMND 763 + +E + YK EK++ + Sbjct 617 ADTDKIKSFEEDLKTYKAIEKILRN 641
>7v6c_A A Dicer-2, isoform A
Length=1733 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 18/182 (10%) Query 243 PRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFANQ 299 PR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N Sbjct 19 PRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNT 77 Query 300 IPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356 + + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ + Sbjct 78 VELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMVT 135 Query 357 KGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTASVGV 414 + T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT + Sbjct 136 Q-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLIK 188 Query 415 GD 416 G+ Sbjct 189 GN 190 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 12/170 (7%) Query 584 QDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEY-HLNPETIT-ILFVKTR---- 637 QD+T E V + S PK++ L+ + +P+ I ++FV+ R Sbjct 353 QDMTXXXXXXXXNTEEVIMNFST--PKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCK 410 Query 638 ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQNTGMTLPA--QKCILDAFKASGDHNIL 694 + L N+I+ P+L + L P + G L QK + F+ G+ N++ Sbjct 411 CIYGLLLNYIQSTPELRNVLTPQFMVGXXXXXXXXXSVLERKWQKSAIQQFR-DGNANLM 469 Query 695 IATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSN 744 I +SV +EGID+ CN V + + V +Q++GR R +K L T++ Sbjct 470 ICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTAD 519
>7v6b_A A Dicer-2, isoform A
Length=1724 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 18/182 (10%) Query 243 PRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFANQ 299 PR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F N Sbjct 10 PRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNT 68 Query 300 IPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356 + + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ + Sbjct 69 VELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMVT 126 Query 357 KGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTASVGV 414 + T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT + Sbjct 127 Q-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGVLIK 179 Query 415 GD 416 G+ Sbjct 180 GN 181 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 59/121 (49%), Gaps = 8/121 (7%) Query 631 ILFVKTR----ALVDALKNWIEGNPKL-SFLKPGILTGRGKTNQNTGMTLPA--QKCILD 683 ++FV+ R + L N+I+ P+L + L P + L QK + Sbjct 391 LVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVXXXXXXXXXXSVLERKWQKSAIQ 450 Query 684 AFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTS 743 F+ G+ N++I +SV +EGID+ CN V + + V +Q++GR R +K L T+ Sbjct 451 QFR-DGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTA 509 Query 744 N 744 + Sbjct 510 D 510
>3ga3_A A Interferon-induced helicase C domain-containing protein
1, MDA5 Length=133 Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 4/102 (4%) Query 808 LLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPK-PKQFSSFEKRAKIFCAR 866 LC+ C LAC D+ VIE+ H+ + FKE ++ R + K+ + ++ +I C Sbjct 13 FLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKELYIVRENKALQKKCADYQINGEIICK- 71 Query 867 QNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908 C WG + +K ++P +KI +FVV + Y KW Sbjct 72 --CGQAWGTMMVHKGLDLPCLKIRNFVVVFKNNSTKKQYKKW 111
>2rqb_A A Interferon-induced helicase C domain-containing protein
1 Length=135 Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 4/102 (4%) Query 808 LLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPK-PKQFSSFEKRAKIFCAR 866 LC+ C LAC D+ VIE+ H+ + FKE ++ R + K+ + ++ +I C Sbjct 15 FLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKELYIVRENKALQKKCADYQINGEIICK- 73 Query 867 QNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKW 908 C WG + +K ++P +KI +FVV + Y KW Sbjct 74 --CGQAWGTMMVHKGLDLPCLKIRNFVVVFKNNSTKKQYKKW 113
>6bua_A A Dicer-2, isoform A
Length=1724 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 90/185 (49%), Gaps = 26/185 (14%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG-------QKGKVVFF 296 R YQL L + + N I+ PTG GKTFV++L+ LK+F Q + +F Sbjct 11 RGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILV----LKRFSQDFXXXXXXXXXRALFM 65 Query 297 ANQIPVYEQQKSVFSKYFE-RHGYRV--TGISGATAENVPVEQIVENNDIIILTPQILVN 353 N + + QQ + + G+ V G+ T E ++ N +++ T Q+ ++ Sbjct 66 CNTVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLD 123 Query 354 NLKKGTIPSLSIFTLMIFDECHNTSKQHPYN--MIMFNYLDQKLGGSSGPLPQVIGLTAS 411 + + T +LS +++I DECH+ + HP+ M +F +Q LP+V+GLT Sbjct 124 MVTQ-TYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQT------KLPRVVGLTGV 176 Query 412 VGVGD 416 + G+ Sbjct 177 LIKGN 181
>3ts9_A A Interferon-induced helicase C domain-containing protein
1 Length=138 Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 35/117 (30%), Positives = 59/117 (50%), Gaps = 22/117 (19%) Query 503 EFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKD 562 +FGTQ YEQW + ++K D + + R+C HLRKYN+AL I++ RM D Sbjct 32 DFGTQHYEQWAIQMEKKAA----KDGNRKDRVC------AEHLRKYNEALQINDTIRMID 81 Query 563 ALDYLKDFFSNVRAAGF------------DEIEQDLTQRFEEKLQELESVSRDPSNE 607 A +L+ F+++ + F DE ++ L F + + L+ ++ +P E Sbjct 82 AYSHLETFYTDEKEKKFAVLNXXXXSLKLDETDEFLMNLFFDNKKMLKKLAENPKYE 138
>2rqa_A A ATP-dependent RNA helicase DHX58
Length=137 Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats. Identities = 35/118 (30%), Positives = 57/118 (48%), Gaps = 6/118 (5%) Query 804 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECF-VSR-PHPKPKQFSSFEKRAK 861 E+ +LLC C + +D+R +E H+ + F + VSR P K F ++ Sbjct 9 EHVQLLCINCMVAVGHGSDLRKVEGTHHVNVNPNFSNYYNVSRDPVVINKVFKDWKPGGV 68 Query 862 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFD 919 I C +NC WG+ + YK+ ++PV+K+ S ++E +Q KW F FD Sbjct 69 ISC--RNCGEVWGLQMIYKSVKLPVLKVRSMLLETPQGRIQA--KKWSRVPFSVPDFD 122
>3eqt_A A ATP-dependent RNA helicase DHX58
Length=145 Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats. Identities = 35/118 (30%), Positives = 57/118 (48%), Gaps = 6/118 (5%) Query 804 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECF-VSR-PHPKPKQFSSFEKRAK 861 E+ +LLC C + +D+R +E H+ + F + VSR P K F ++ Sbjct 10 EHVQLLCINCMVAVGHGSDLRKVEGTHHVNVNPNFSNYYNVSRDPVVINKVFKDWKPGGV 69 Query 862 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFD 919 I C +NC WG+ + YK+ ++PV+K+ S ++E +Q KW F FD Sbjct 70 ISC--RNCGEVWGLQMIYKSVKLPVLKVRSMLLETPQGRIQA--KKWSRVPFSVPDFD 123
>3eqt_B B ATP-dependent RNA helicase DHX58
Length=145 Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats. Identities = 35/118 (30%), Positives = 57/118 (48%), Gaps = 6/118 (5%) Query 804 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECF-VSR-PHPKPKQFSSFEKRAK 861 E+ +LLC C + +D+R +E H+ + F + VSR P K F ++ Sbjct 10 EHVQLLCINCMVAVGHGSDLRKVEGTHHVNVNPNFSNYYNVSRDPVVINKVFKDWKPGGV 69 Query 862 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFD 919 I C +NC WG+ + YK+ ++PV+K+ S ++E +Q KW F FD Sbjct 70 ISC--RNCGEVWGLQMIYKSVKLPVLKVRSMLLETPQGRIQA--KKWSRVPFSVPDFD 123
>2w4r_A A PROBABLE ATP-DEPENDENT RNA HELICASE DHX58
Length=142 Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats. Identities = 34/118 (29%), Positives = 56/118 (47%), Gaps = 6/118 (5%) Query 804 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECF-VSR-PHPKPKQFSSFEKRAK 861 E+ +LLC C + +D+R +E H+ + F + VSR P F ++ Sbjct 14 EHVQLLCINCMVAVGHGSDLRKVEGTHHVNVNPNFSNYYNVSRDPVVXXXXFKDWKPGGV 73 Query 862 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFD 919 I C +NC WG+ + YK+ ++PV+K+ S ++E +Q KW F FD Sbjct 74 ISC--RNCGEVWGLQMIYKSVKLPVLKVRSMLLETPQGRIQA--KKWSRVPFSVPDFD 127
>2w4r_D D PROBABLE ATP-DEPENDENT RNA HELICASE DHX58
Length=142 Score = 50.1 bits (118), Expect = 9e-06, Method: Composition-based stats. Identities = 33/118 (28%), Positives = 55/118 (47%), Gaps = 6/118 (5%) Query 804 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECF-VSRPHPKPKQ-FSSFEKRAK 861 E+ +LLC C + +D+R +E H+ + F + VSR F ++ Sbjct 14 EHVQLLCINCMVAVGHGSDLRKVEGTHHVNVNPNFSNYYNVSRDXXXXXXXFKDWKPGGV 73 Query 862 IFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFD 919 I C +NC WG+ + YK+ ++PV+K+ S ++E +Q KW F FD Sbjct 74 ISC--RNCGEVWGLQMIYKSVKLPVLKVRSMLLETPQGRIQA--KKWSRVPFSVPDFD 127
>2w4r_C C PROBABLE ATP-DEPENDENT RNA HELICASE DHX58
Length=142 Score = 50.1 bits (118), Expect = 9e-06, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 9/128 (7%) Query 794 QEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECF-VSRPHPKPKQ 852 Q + PV E+ +LLC C + +D+R +E H+ + F + VSR Sbjct 7 QRQQFPV---EHVQLLCINCMVAVGHGSDLRKVEGTHHVNVNPNFSNYYNVSRDXXXXXX 63 Query 853 -FSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDF 911 F ++ I C +NC WG+ + YK+ ++PV+K+ S ++E +Q KW Sbjct 64 VFKDWKPGGVISC--RNCGEVWGLQMIYKSVKLPVLKVRSMLLETPQGRIQA--KKWSRV 119 Query 912 HFEKIPFD 919 F FD Sbjct 120 PFSVPDFD 127
>2w4r_B B PROBABLE ATP-DEPENDENT RNA HELICASE DHX58
Length=142 Score = 50.1 bits (118), Expect = 9e-06, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 4/117 (3%) Query 804 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECF-VSRPHPKPKQFSSFEKRAKI 862 E+ +LLC C + +D+R +E H+ + F + VSR K + Sbjct 14 EHVQLLCINCMVAVGHGSDLRKVEGTHHVNVNPNFSNYYNVSRDXXXXXXXXXXWKPGGV 73 Query 863 FCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFD 919 R NC WG+ + YK+ ++PV+K+ S ++E +Q KW F FD Sbjct 74 ISCR-NCGEVWGLQMIYKSVKLPVLKVRSMLLETPQGRIQA--KKWSRVPFSVPDFD 127
>5v9x_A A ATP-dependent DNA helicase
Length=877 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 46/173 (27%), Positives = 70/173 (40%), Gaps = 20/173 (12%) Query 256 KGKNTIICAPTGCGKTFVSLLICEHHLK-KFPQGQKGKVVFFANQIPV--------YEQQ 306 +G NT++ APTG GKT + L L +G V + + + Sbjct 61 EGNNTLVIAPTGSGKTLAAFLWAIDRLADPXXXXXQGTQVLYVSPLKALAVDVERNLRTP 120 Query 307 KSVFSKYFERHGYRVTGI-----SGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIP 361 + ++ ERHG I SG T N I D++I TP+ L L Sbjct 121 LTGITRVAERHGLPAPSITVGVRSGDTPPNQRRAMIANPPDVLITTPESLFLMLTSAARE 180 Query 362 SLSIFTLMIFDECH--NTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASV 412 +L+ +I DE H +K+ + + LDQ L + Q IGL+A+V Sbjct 181 TLTSVRTVIVDEVHAVAATKRGAHLALSLERLDQLLDTPA----QRIGLSATV 229
>6qws_A A Pre-mRNA splicing helicase-like protein
Length=1725 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/125 (29%), Positives = 63/125 (50%), Gaps = 12/125 (10%) Query 259 NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-------KVVFFANQIPVYEQQKSVFS 311 N ++CAPTG GKT V++L + K + +KG K+V+ A + ++Q F Sbjct 78 NMLVCAPTGSGKTNVAMLTMLREIGK-NRNEKGEIDLDAFKIVYIAPLKALVQEQVGNFG 136 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT-IPSLSIFTLMI 370 K E +G +V+ ++G + +Q + +I+ TP+ +K T I ++ L+I Sbjct 137 KRLEPYGIKVSELTG---DRQLTKQQISETQVIVTTPEKWDVITRKATDISYTNLVRLII 193 Query 371 FDECH 375 DE H Sbjct 194 IDEIH 198 Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust. Identities = 43/175 (25%), Positives = 77/175 (44%), Gaps = 21/175 (12%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFER 316 N ++ APTG GKT +C L+ + + G+ V+ A P E F + +R Sbjct 928 NVLVAAPTGSGKT-----VCAEFALLRHWAKKDAGRAVYIA---PFQELVDLRFQDWQKR 979 Query 317 HGYRVTG--ISGATAENVPVEQIVENNDIIILTP---QILVNNLKKGTIPSLSIFTLMIF 371 + G I T E +++E D+I+ TP +L K+ ++ L I Sbjct 980 LSHLRGGKEIVKLTGETTTDLKLLEQGDLILATPLQWDVLSRQWKRRK--NVQTVELFIA 1037 Query 372 DECHNTSKQHPYNM-IMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALD 425 D+ H Q Y I+ + + + P+ +++GL SV + +A++ E +D Sbjct 1038 DDLHMLGGQMGYIYEIVVSRMHFIRTQTELPM-RIVGL--SVSLANARDIGEWID 1089
>5m59_H G Pre-mRNA splicing helicase-like protein
Length=1772 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/125 (29%), Positives = 63/125 (50%), Gaps = 12/125 (10%) Query 259 NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-------KVVFFANQIPVYEQQKSVFS 311 N ++CAPTG GKT V++L + K + +KG K+V+ A + ++Q F Sbjct 125 NMLVCAPTGSGKTNVAMLTMLREIGK-NRNEKGEIDLDAFKIVYIAPLKALVQEQVGNFG 183 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT-IPSLSIFTLMI 370 K E +G +V+ ++G + +Q + +I+ TP+ +K T I ++ L+I Sbjct 184 KRLEPYGIKVSELTG---DRQLTKQQISETQVIVTTPEKWDVITRKATDISYTNLVRLII 240 Query 371 FDECH 375 DE H Sbjct 241 IDEIH 245 Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust. Identities = 43/175 (25%), Positives = 77/175 (44%), Gaps = 21/175 (12%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFER 316 N ++ APTG GKT +C L+ + + G+ V+ A P E F + +R Sbjct 975 NVLVAAPTGSGKT-----VCAEFALLRHWAKKDAGRAVYIA---PFQELVDLRFQDWQKR 1026 Query 317 HGYRVTG--ISGATAENVPVEQIVENNDIIILTP---QILVNNLKKGTIPSLSIFTLMIF 371 + G I T E +++E D+I+ TP +L K+ ++ L I Sbjct 1027 LSHLRGGKEIVKLTGETTTDLKLLEQGDLILATPLQWDVLSRQWKRRK--NVQTVELFIA 1084 Query 372 DECHNTSKQHPYNM-IMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALD 425 D+ H Q Y I+ + + + P+ +++GL SV + +A++ E +D Sbjct 1085 DDLHMLGGQMGYIYEIVVSRMHFIRTQTELPM-RIVGL--SVSLANARDIGEWID 1136
>6qv4_A A Pre-mRNA splicing helicase-like protein
Length=1725 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/125 (29%), Positives = 63/125 (50%), Gaps = 12/125 (10%) Query 259 NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-------KVVFFANQIPVYEQQKSVFS 311 N ++CAPTG GKT V++L + K + +KG K+V+ A + ++Q F Sbjct 78 NMLVCAPTGSGKTNVAMLTMLREIGK-NRNEKGEIDLDAFKIVYIAPLKALVQEQVGNFG 136 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT-IPSLSIFTLMI 370 K E +G +V+ ++G + +Q + +I+ TP+ +K T I ++ L+I Sbjct 137 KRLEPYGIKVSELTG---DRQLTKQQISETQVIVTTPEKWDVITRKATDISYTNLVRLII 193 Query 371 FDECH 375 DE H Sbjct 194 IDEIH 198 Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust. Identities = 43/175 (25%), Positives = 77/175 (44%), Gaps = 21/175 (12%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFER 316 N ++ APTG GKT +C L+ + + G+ V+ A P E F + +R Sbjct 928 NVLVAAPTGSGKT-----VCAEFALLRHWAKKDAGRAVYIA---PFQELVDLRFQDWQKR 979 Query 317 HGYRVTG--ISGATAENVPVEQIVENNDIIILTP---QILVNNLKKGTIPSLSIFTLMIF 371 + G I T E +++E D+I+ TP +L K+ ++ L I Sbjct 980 LSHLRGGKEIVKLTGETTTDLKLLEQGDLILATPLQWDVLSRQWKRRK--NVQTVELFIA 1037 Query 372 DECHNTSKQHPYNM-IMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALD 425 D+ H Q Y I+ + + + P+ +++GL SV + +A++ E +D Sbjct 1038 DDLHMLGGQMGYIYEIVVSRMHFIRTQTELPM-RIVGL--SVSLANARDIGEWID 1089
>6qv3_A A Pre-mRNA splicing helicase-like protein
Length=1725 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/125 (29%), Positives = 63/125 (50%), Gaps = 12/125 (10%) Query 259 NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-------KVVFFANQIPVYEQQKSVFS 311 N ++CAPTG GKT V++L + K + +KG K+V+ A + ++Q F Sbjct 78 NMLVCAPTGSGKTNVAMLTMLREIGK-NRNEKGEIDLDAFKIVYIAPLKALVQEQVGNFG 136 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT-IPSLSIFTLMI 370 K E +G +V+ ++G + +Q + +I+ TP+ +K T I ++ L+I Sbjct 137 KRLEPYGIKVSELTG---DRQLTKQQISETQVIVTTPEKWDVITRKATDISYTNLVRLII 193 Query 371 FDECH 375 DE H Sbjct 194 IDEIH 198 Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust. Identities = 43/175 (25%), Positives = 77/175 (44%), Gaps = 21/175 (12%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFER 316 N ++ APTG GKT +C L+ + + G+ V+ A P E F + +R Sbjct 928 NVLVAAPTGSGKT-----VCAEFALLRHWAKKDAGRAVYIA---PFQELVDLRFQDWQKR 979 Query 317 HGYRVTG--ISGATAENVPVEQIVENNDIIILTP---QILVNNLKKGTIPSLSIFTLMIF 371 + G I T E +++E D+I+ TP +L K+ ++ L I Sbjct 980 LSHLRGGKEIVKLTGETTTDLKLLEQGDLILATPLQWDVLSRQWKRRK--NVQTVELFIA 1037 Query 372 DECHNTSKQHPYNM-IMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALD 425 D+ H Q Y I+ + + + P+ +++GL SV + +A++ E +D Sbjct 1038 DDLHMLGGQMGYIYEIVVSRMHFIRTQTELPM-RIVGL--SVSLANARDIGEWID 1089
>5m59_F E Pre-mRNA splicing helicase-like protein
Length=1772 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/125 (29%), Positives = 63/125 (50%), Gaps = 12/125 (10%) Query 259 NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-------KVVFFANQIPVYEQQKSVFS 311 N ++CAPTG GKT V++L + K + +KG K+V+ A + ++Q F Sbjct 125 NMLVCAPTGSGKTNVAMLTMLREIGK-NRNEKGEIDLDAFKIVYIAPLKALVQEQVGNFG 183 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT-IPSLSIFTLMI 370 K E +G +V+ ++G + +Q + +I+ TP+ +K T I ++ L+I Sbjct 184 KRLEPYGIKVSELTG---DRQLTKQQISETQVIVTTPEKWDVITRKATDISYTNLVRLII 240 Query 371 FDECH 375 DE H Sbjct 241 IDEIH 245 Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust. Identities = 43/175 (25%), Positives = 77/175 (44%), Gaps = 21/175 (12%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFER 316 N ++ APTG GKT +C L+ + + G+ V+ A P E F + +R Sbjct 975 NVLVAAPTGSGKT-----VCAEFALLRHWAKKDAGRAVYIA---PFQELVDLRFQDWQKR 1026 Query 317 HGYRVTG--ISGATAENVPVEQIVENNDIIILTP---QILVNNLKKGTIPSLSIFTLMIF 371 + G I T E +++E D+I+ TP +L K+ ++ L I Sbjct 1027 LSHLRGGKEIVKLTGETTTDLKLLEQGDLILATPLQWDVLSRQWKRRK--NVQTVELFIA 1084 Query 372 DECHNTSKQHPYNM-IMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALD 425 D+ H Q Y I+ + + + P+ +++GL SV + +A++ E +D Sbjct 1085 DDLHMLGGQMGYIYEIVVSRMHFIRTQTELPM-RIVGL--SVSLANARDIGEWID 1136
>5m59_B A Pre-mRNA splicing helicase-like protein
Length=1772 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/125 (29%), Positives = 63/125 (50%), Gaps = 12/125 (10%) Query 259 NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-------KVVFFANQIPVYEQQKSVFS 311 N ++CAPTG GKT V++L + K + +KG K+V+ A + ++Q F Sbjct 125 NMLVCAPTGSGKTNVAMLTMLREIGK-NRNEKGEIDLDAFKIVYIAPLKALVQEQVGNFG 183 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT-IPSLSIFTLMI 370 K E +G +V+ ++G + +Q + +I+ TP+ +K T I ++ L+I Sbjct 184 KRLEPYGIKVSELTG---DRQLTKQQISETQVIVTTPEKWDVITRKATDISYTNLVRLII 240 Query 371 FDECH 375 DE H Sbjct 241 IDEIH 245 Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust. Identities = 43/175 (25%), Positives = 77/175 (44%), Gaps = 21/175 (12%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFER 316 N ++ APTG GKT +C L+ + + G+ V+ A P E F + +R Sbjct 975 NVLVAAPTGSGKT-----VCAEFALLRHWAKKDAGRAVYIA---PFQELVDLRFQDWQKR 1026 Query 317 HGYRVTG--ISGATAENVPVEQIVENNDIIILTP---QILVNNLKKGTIPSLSIFTLMIF 371 + G I T E +++E D+I+ TP +L K+ ++ L I Sbjct 1027 LSHLRGGKEIVKLTGETTTDLKLLEQGDLILATPLQWDVLSRQWKRRK--NVQTVELFIA 1084 Query 372 DECHNTSKQHPYNM-IMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALD 425 D+ H Q Y I+ + + + P+ +++GL SV + +A++ E +D Sbjct 1085 DDLHMLGGQMGYIYEIVVSRMHFIRTQTELPM-RIVGL--SVSLANARDIGEWID 1136
>5m59_D C Pre-mRNA splicing helicase-like protein
Length=1772 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/125 (29%), Positives = 63/125 (50%), Gaps = 12/125 (10%) Query 259 NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG-------KVVFFANQIPVYEQQKSVFS 311 N ++CAPTG GKT V++L + K + +KG K+V+ A + ++Q F Sbjct 125 NMLVCAPTGSGKTNVAMLTMLREIGK-NRNEKGEIDLDAFKIVYIAPLKALVQEQVGNFG 183 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT-IPSLSIFTLMI 370 K E +G +V+ ++G + +Q + +I+ TP+ +K T I ++ L+I Sbjct 184 KRLEPYGIKVSELTG---DRQLTKQQISETQVIVTTPEKWDVITRKATDISYTNLVRLII 240 Query 371 FDECH 375 DE H Sbjct 241 IDEIH 245 Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust. Identities = 43/175 (25%), Positives = 77/175 (44%), Gaps = 21/175 (12%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFER 316 N ++ APTG GKT +C L+ + + G+ V+ A P E F + +R Sbjct 975 NVLVAAPTGSGKT-----VCAEFALLRHWAKKDAGRAVYIA---PFQELVDLRFQDWQKR 1026 Query 317 HGYRVTG--ISGATAENVPVEQIVENNDIIILTP---QILVNNLKKGTIPSLSIFTLMIF 371 + G I T E +++E D+I+ TP +L K+ ++ L I Sbjct 1027 LSHLRGGKEIVKLTGETTTDLKLLEQGDLILATPLQWDVLSRQWKRRK--NVQTVELFIA 1084 Query 372 DECHNTSKQHPYNM-IMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALD 425 D+ H Q Y I+ + + + P+ +++GL SV + +A++ E +D Sbjct 1085 DDLHMLGGQMGYIYEIVVSRMHFIRTQTELPM-RIVGL--SVSLANARDIGEWID 1136
>8dfv_A A Endoribonuclease Dcr-1
Length=2249 Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 5/112 (4%) Query 636 TRALVDALKNWIEGNPKLSFLKPGILTGR----GKTNQNTGMTLPAQKCILDAFKASGDH 691 R L + L +P L FL+ T R + + Q+ +L F+ D Sbjct 505 ARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEVLKRFRMH-DC 563 Query 692 NILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTS 743 N+LI TSV +EGID+ +CNLV+ ++ +Q +GR RA + +L + Sbjct 564 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVA 615 Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust. Identities = 50/256 (20%), Positives = 115/256 (45%), Gaps = 18/256 (7%) Query 234 DTNLYSP-FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGK 292 D NL++ F PR++Q+EL A + +NTIIC K F++L + + ++ + G+ Sbjct 7 DNNLHTTVFTPRDFQVELLATAYE-RNTIICLGHRSSKEFIALKLLQELSRR--ARRHGR 63 Query 293 V-VFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL 351 V V+ + ++ + S+++ RV +P + + + IL P+ Sbjct 64 VSVYLSCEVGTSTEPCSIYTMLTHLTDLRV--WQEQPDMQIPFDHCWTDYHVSILRPEGF 121 Query 352 VNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTAS 411 + L+ + LS L++ ++CH+++ Y I + + + P+++GL Sbjct 122 LYLLETREL-LLSRVELIVLEDCHDSAV---YQRIRPLFENHIMPAPPADRPRILGL--- 174 Query 412 VGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVY--KPQKFFRKVESRISD 469 G + L + + A+L+ SV+ ++ + + + Y +P ++ + D Sbjct 175 --AGPLHSAGCELQQLSAMLATLEQSVLCQIESASDIVTVLRYCSRPHEYIVQCAPFEMD 232 Query 470 KFKYIIAQLMRDTESL 485 + ++A ++ +S Sbjct 233 ELSLVLADVLNTHKSF 248
>8dg5_A A Endoribonuclease Dcr-1
Length=2249 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 5/112 (4%) Query 636 TRALVDALKNWIEGNPKLSFLKPGILTGR----GKTNQNTGMTLPAQKCILDAFKASGDH 691 R L + L +P L FL+ T R + + Q+ +L F+ D Sbjct 505 ARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEVLKRFRMH-DC 563 Query 692 NILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTS 743 N+LI TSV +EGID+ +CNLV+ ++ +Q +GR RA + +L + Sbjct 564 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVA 615 Score = 42.0 bits (97), Expect = 0.040, Method: Compositional matrix adjust. Identities = 47/248 (19%), Positives = 110/248 (44%), Gaps = 17/248 (7%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKV-VFFANQ 299 F PR++Q+EL A + +NTIIC K F++L + + ++ + G+V V+ + + Sbjct 15 FTPRDFQVELLATAYE-RNTIICLGHRSSKEFIALKLLQELSRR--ARRHGRVSVYLSCE 71 Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 + + S+++ RV +P + + + IL P+ + L+ Sbjct 72 VGTSTEPCSIYTMLTHLTDLRV--WQEQPDMQIPFDHCWTDYHVSILRPEGFLYLLETRE 129 Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 + LS L++ ++CH+++ Y I + + + P+++GL G + Sbjct 130 L-LLSRVELIVLEDCHDSAV---YQRIRPLFENHIMPAPPADRPRILGL-----AGPLHS 180 Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVY--KPQKFFRKVESRISDKFKYIIAQ 477 L + + A+L+ SV+ ++ + + + Y +P ++ + D+ ++A Sbjct 181 AGCELQQLSAMLATLEQSVLCQIESASDIVTVLRYCSRPHEYIVQCAPFEMDELSLVLAD 240 Query 478 LMRDTESL 485 ++ +S Sbjct 241 VLNTHKSF 248
>8dg7_A A Endoribonuclease Dcr-1
Length=2249 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 5/112 (4%) Query 636 TRALVDALKNWIEGNPKLSFLKPGILTGR----GKTNQNTGMTLPAQKCILDAFKASGDH 691 R L + L +P L FL+ T R + + Q+ +L F+ D Sbjct 505 ARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEVLKRFRMH-DC 563 Query 692 NILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTS 743 N+LI TSV +EGID+ +CNLV+ ++ +Q +GR RA + +L + Sbjct 564 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVA 615 Score = 42.0 bits (97), Expect = 0.040, Method: Compositional matrix adjust. Identities = 47/248 (19%), Positives = 110/248 (44%), Gaps = 17/248 (7%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKV-VFFANQ 299 F PR++Q+EL A + +NTIIC K F++L + + ++ + G+V V+ + + Sbjct 15 FTPRDFQVELLATAYE-RNTIICLGHRSSKEFIALKLLQELSRR--ARRHGRVSVYLSCE 71 Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 + + S+++ RV +P + + + IL P+ + L+ Sbjct 72 VGTSTEPCSIYTMLTHLTDLRV--WQEQPDMQIPFDHCWTDYHVSILRPEGFLYLLETRE 129 Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 + LS L++ ++CH+++ Y I + + + P+++GL G + Sbjct 130 L-LLSRVELIVLEDCHDSAV---YQRIRPLFENHIMPAPPADRPRILGL-----AGPLHS 180 Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVY--KPQKFFRKVESRISDKFKYIIAQ 477 L + + A+L+ SV+ ++ + + + Y +P ++ + D+ ++A Sbjct 181 AGCELQQLSAMLATLEQSVLCQIESASDIVTVLRYCSRPHEYIVQCAPFEMDELSLVLAD 240 Query 478 LMRDTESL 485 ++ +S Sbjct 241 VLNTHKSF 248
>8dgi_A A Endoribonuclease Dcr-1
Length=2249 Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 5/112 (4%) Query 636 TRALVDALKNWIEGNPKLSFLKPGILTGR----GKTNQNTGMTLPAQKCILDAFKASGDH 691 R L + L +P L FL+ T R + + Q+ +L F+ D Sbjct 505 ARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEVLKRFRMH-DC 563 Query 692 NILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTS 743 N+LI TSV +EGID+ +CNLV+ ++ +Q +GR RA + +L + Sbjct 564 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVA 615 Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust. Identities = 47/248 (19%), Positives = 110/248 (44%), Gaps = 17/248 (7%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKV-VFFANQ 299 F PR++Q+EL A + +NTIIC K F++L + + ++ + G+V V+ + + Sbjct 15 FTPRDFQVELLATAYE-RNTIICLGHRSSKEFIALKLLQELSRR--ARRHGRVSVYLSCE 71 Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 + + S+++ RV +P + + + IL P+ + L+ Sbjct 72 VGTSTEPCSIYTMLTHLTDLRV--WQEQPDMQIPFDHCWTDYHVSILRPEGFLYLLETRE 129 Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 + LS L++ ++CH+++ Y I + + + P+++GL G + Sbjct 130 L-LLSRVELIVLEDCHDSAV---YQRIRPLFENHIMPAPPADRPRILGL-----AGPLHS 180 Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVY--KPQKFFRKVESRISDKFKYIIAQ 477 L + + A+L+ SV+ ++ + + + Y +P ++ + D+ ++A Sbjct 181 AGCELQQLSAMLATLEQSVLCQIESASDIVTVLRYCSRPHEYIVQCAPFEMDELSLVLAD 240 Query 478 LMRDTESL 485 ++ +S Sbjct 241 VLNTHKSF 248
>8dgj_A A Endoribonuclease Dcr-1
Length=2249 Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 5/112 (4%) Query 636 TRALVDALKNWIEGNPKLSFLKPGILTGR----GKTNQNTGMTLPAQKCILDAFKASGDH 691 R L + L +P L FL+ T R + + Q+ +L F+ D Sbjct 505 ARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEVLKRFRMH-DC 563 Query 692 NILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTS 743 N+LI TSV +EGID+ +CNLV+ ++ +Q +GR RA + +L + Sbjct 564 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVA 615 Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust. Identities = 47/248 (19%), Positives = 110/248 (44%), Gaps = 17/248 (7%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKV-VFFANQ 299 F PR++Q+EL A + +NTIIC K F++L + + ++ + G+V V+ + + Sbjct 15 FTPRDFQVELLATAYE-RNTIICLGHRSSKEFIALKLLQELSRR--ARRHGRVSVYLSCE 71 Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 + + S+++ RV +P + + + IL P+ + L+ Sbjct 72 VGTSTEPCSIYTMLTHLTDLRV--WQEQPDMQIPFDHCWTDYHVSILRPEGFLYLLETRE 129 Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 + LS L++ ++CH+++ Y I + + + P+++GL G + Sbjct 130 L-LLSRVELIVLEDCHDSAV---YQRIRPLFENHIMPAPPADRPRILGL-----AGPLHS 180 Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVY--KPQKFFRKVESRISDKFKYIIAQ 477 L + + A+L+ SV+ ++ + + + Y +P ++ + D+ ++A Sbjct 181 AGCELQQLSAMLATLEQSVLCQIESASDIVTVLRYCSRPHEYIVQCAPFEMDELSLVLAD 240 Query 478 LMRDTESL 485 ++ +S Sbjct 241 VLNTHKSF 248
>6bu9_A A Dicer-2, isoform A
Length=1724 Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 6/140 (4%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF--PQGQKGK-VVFFA 297 KPR YQL L + + N I+ PTG GKTFV++L+ + + F P GK +F Sbjct 8 IKPRGYQLRL-VDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMC 66 Query 298 NQIPVYEQQKSVFSKYFE-RHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356 N + + QQ + + G+ V ++ N +++ T Q Sbjct 67 NTVELARQQAMAVRRCTNFKVGFYVGXXXXXXWTRGMWSDEIKKNQVLVGTAQXXXXXXX 126 Query 357 KGTIPSLSIFTLMIFDECHN 376 +LS +++I DECH+ Sbjct 127 X-XXXALSSLSVVIIDECHH 145 Score = 42.4 bits (98), Expect = 0.028, Method: Compositional matrix adjust. Identities = 22/65 (34%), Positives = 36/65 (55%), Gaps = 1/65 (2%) Query 678 QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSK 737 QK + F+ G+ N++I +SV +EGID+ CN V + + +Q++GR R +K Sbjct 445 QKSAIQQFR-DGNANLMICSSVLEEGIDVQACNHVFILDPXXXFNMYVQSKGRARTTEAK 503 Query 738 CFLLT 742 L T Sbjct 504 FVLFT 508
>8alz_B B Activating signal cointegrator 1 complex subunit 3
Length=1806 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKK-FPQG----QKGKVVFFANQIPVYEQQKSVFSK 312 +N +ICAPTG GKT +++L H +++ F QG + K+V+ A + + FS+ Sbjct 97 ENMLICAPTGAGKTNIAMLTVLHEIRQHFQQGVIKKNEFKIVYVAPMKALAAEMTDYFSR 156 Query 313 YFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQI--LVNNLKKGTIPSLSIFTLMI 370 E G V ++G + + + +++ TP+ +V G + I L+I Sbjct 157 RLEPLGIIVKELTGDMQLS---KSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVRLLI 213 Query 371 FDECH 375 DE H Sbjct 214 LDEVH 218
>8y6o_I I Probable ATP-dependent RNA helicase DDX23
Length=820 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 58/228 (25%), Positives = 97/228 (43%), Gaps = 31/228 (14%) Query 524 QMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIE 583 Q PD DE K L + S KY ++ + A M A++ L + A + Sbjct 575 QKPDTDEAEDPEKMLANFESGKHKYRQTVMFT--ATMPPAVERLARSYLRRPAVVYIGXA 632 Query 584 QDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDAL 643 +R E+K+ + +E+ K + L IL++ + + I+FV + D L Sbjct 633 GKPHERVEQKVFLM--------SESEKRKKLLAILEQGF----DPPIIIFVNQKKGCDVL 680 Query 644 KNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEG 703 +E K+ + + G+G+ + ++ KA G +IL+AT VA G Sbjct 681 AKSLE---KMGYNACTLHGGKGQEQREFALS---------NLKA-GAKDILVATDVAGRG 727 Query 704 IDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKC---FLLTSNAGV 747 IDI ++V+ Y+ N+ I GR GRA S FL ++ V Sbjct 728 IDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAV 775
>2zj5_A A Putative ski2-type helicase
Length=720 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/162 (25%), Positives = 76/162 (47%), Gaps = 21/162 (13%) Query 255 MKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYF 314 ++GKN +I PT GKT ++ + H + Q GK V+ + E++ F + Sbjct 37 LEGKNALISIPTASGKTLIAEIAMVHRI----LTQGGKAVYIVPLKALAEEKFQEFQDW- 91 Query 315 ERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDEC 374 E+ G RV + AT + ++ + DIII T + + L+ G+ + +++ DE Sbjct 92 EKIGLRV---AMATGDYDSKDEWLGKYDIIIATAEKFDSLLRHGS-SWIKDVKILVADEI 147 Query 375 H---NTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVG 413 H + + +I+ + L + Q+IGL+A++G Sbjct 148 HLIGSRDRGATLEVILAHMLGK---------AQIIGLSATIG 180
>2zj2_A A Putative ski2-type helicase
Length=720 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/162 (25%), Positives = 76/162 (47%), Gaps = 21/162 (13%) Query 255 MKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYF 314 ++GKN +I PT GKT ++ + H + Q GK V+ + E++ F + Sbjct 37 LEGKNALISIPTASGKTLIAEIAMVHRILT----QGGKAVYIVPLKALAEEKFQEFQDW- 91 Query 315 ERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDEC 374 E+ G RV + AT + ++ + DIII T + + L+ G+ + +++ DE Sbjct 92 EKIGLRV---AMATGDYDSKDEWLGKYDIIIATAEKFDSLLRHGS-SWIKDVKILVADEI 147 Query 375 H---NTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVG 413 H + + +I+ + L + Q+IGL+A++G Sbjct 148 HLIGSRDRGATLEVILAHMLGK---------AQIIGLSATIG 180
>2zj8_A A Putative ski2-type helicase
Length=720 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 40/162 (25%), Positives = 76/162 (47%), Gaps = 21/162 (13%) Query 255 MKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYF 314 ++GKN +I PT GKT ++ + H + Q GK V+ + E++ F + Sbjct 37 LEGKNALISIPTASGKTLIAEIAMVHRILT----QGGKAVYIVPLKALAEEKFQEFQDW- 91 Query 315 ERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDEC 374 E+ G RV + AT + ++ + DIII T + + L+ G+ + +++ DE Sbjct 92 EKIGLRV---AMATGDYDSKDEWLGKYDIIIATAEKFDSLLRHGS-SWIKDVKILVADEI 147 Query 375 H---NTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVG 413 H + + +I+ + L + Q+IGL+A++G Sbjct 148 HLIGSRDRGATLEVILAHMLGK---------AQIIGLSATIG 180
>2zja_A A Putative ski2-type helicase
Length=720 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 40/162 (25%), Positives = 76/162 (47%), Gaps = 21/162 (13%) Query 255 MKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYF 314 ++GKN +I PT GKT ++ + H + Q GK V+ + E++ F + Sbjct 37 LEGKNALISIPTASGKTLIAEIAMVHRILT----QGGKAVYIVPLKALAEEKFQEFQDW- 91 Query 315 ERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDEC 374 E+ G RV + AT + ++ + DIII T + + L+ G+ + +++ DE Sbjct 92 EKIGLRV---AMATGDYDSKDEWLGKYDIIIATAEKFDSLLRHGS-SWIKDVKILVADEI 147 Query 375 H---NTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVG 413 H + + +I+ + L + Q+IGL+A++G Sbjct 148 HLIGSRDRGATLEVILAHMLGK---------AQIIGLSATIG 180
>7vpx_L E Probable ATP-dependent RNA helicase DDX46
Length=1031 Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust. Identities = 37/139 (27%), Positives = 62/139 (45%), Gaps = 7/139 (5%) Query 242 KPRNYQLELALPA-MKGKNTIICAPTGCGKTFVSLLICEHHL---KKFPQGQKGKVVFFA 297 KP Q + A+PA M G++ I A TG GKT LL H+ + +G+ V Sbjct 394 KPTPIQTQ-AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMT 452 Query 298 NQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL-- 355 + Q K+ + G RV + G T + + ++ +II+ TP +++ L Sbjct 453 PTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAA 512 Query 356 KKGTIPSLSIFTLMIFDEC 374 G + +L T ++ DE Sbjct 513 NSGRVTNLRRVTYVVLDEA 531
>7evo_L E RNA helicase
Length=1052 Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust. Identities = 37/139 (27%), Positives = 62/139 (45%), Gaps = 7/139 (5%) Query 242 KPRNYQLELALPA-MKGKNTIICAPTGCGKTFVSLLICEHHL---KKFPQGQKGKVVFFA 297 KP Q + A+PA M G++ I A TG GKT LL H+ + +G+ V Sbjct 414 KPTPIQTQ-AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMT 472 Query 298 NQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL-- 355 + Q K+ + G RV + G T + + ++ +II+ TP +++ L Sbjct 473 PTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAA 532 Query 356 KKGTIPSLSIFTLMIFDEC 374 G + +L T ++ DE Sbjct 533 NSGRVTNLRRVTYVVLDEA 551
>6y5q_F p Probable ATP-dependent RNA helicase DDX46
Length=1031 Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust. Identities = 37/139 (27%), Positives = 62/139 (45%), Gaps = 7/139 (5%) Query 242 KPRNYQLELALPA-MKGKNTIICAPTGCGKTFVSLLICEHHL---KKFPQGQKGKVVFFA 297 KP Q + A+PA M G++ I A TG GKT LL H+ + +G+ V Sbjct 394 KPTPIQTQ-AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMT 452 Query 298 NQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL-- 355 + Q K+ + G RV + G T + + ++ +II+ TP +++ L Sbjct 453 PTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAA 512 Query 356 KKGTIPSLSIFTLMIFDEC 374 G + +L T ++ DE Sbjct 513 NSGRVTNLRRVTYVVLDEA 531
>8arp_A A ATP-dependent RNA helicase DBP2
Length=546 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 20/138 (14%) Query 630 TILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687 T++F T+ + D + ++ +G P L+ G +Q + +L F+ Sbjct 363 TLIFASTKRMCDDITKYLREDGWPALAI--------HGDKDQR------ERDWVLQEFR- 407 Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNV---IKMIQTRGRGRARGSKCFLLTSN 744 +G I++AT VA GID+ N VI Y+ GN+ + I GR A G+ T Sbjct 408 NGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQ 467 Query 745 AGVIEKEQINMYKEKMMN 762 + + I++ +E N Sbjct 468 NKGLGAKLISIMREANQN 485 Score = 40.4 bits (93), Expect = 0.098, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 4/136 (3%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFP---QGQKGKVVFFAN 298 KP Q + A+ G++ + A TG GKT L H+ P G V+ A Sbjct 135 KPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAP 194 Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358 + Q ++ SK+ R T + G ++ + + ++I+I TP L++ L+ G Sbjct 195 TRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIG 254 Query 359 TIPSLSIFTLMIFDEC 374 +L T ++ DE Sbjct 255 KT-NLKRVTYLVLDEA 269
>8arp_F F ATP-dependent RNA helicase DBP2
Length=546 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 20/138 (14%) Query 630 TILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687 T++F T+ + D + ++ +G P L+ G +Q + +L F+ Sbjct 363 TLIFASTKRMCDDITKYLREDGWPALAI--------HGDKDQR------ERDWVLQEFR- 407 Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNV---IKMIQTRGRGRARGSKCFLLTSN 744 +G I++AT VA GID+ N VI Y+ GN+ + I GR A G+ T Sbjct 408 NGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQ 467 Query 745 AGVIEKEQINMYKEKMMN 762 + + I++ +E N Sbjct 468 NKGLGAKLISIMREANQN 485 Score = 40.4 bits (93), Expect = 0.096, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 4/136 (3%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFP---QGQKGKVVFFAN 298 KP Q + A+ G++ + A TG GKT L H+ P G V+ A Sbjct 135 KPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAP 194 Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358 + Q ++ SK+ R T + G ++ + + ++I+I TP L++ L+ G Sbjct 195 TRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIG 254 Query 359 TIPSLSIFTLMIFDEC 374 +L T ++ DE Sbjct 255 KT-NLKRVTYLVLDEA 269
>8arp_C C ATP-dependent RNA helicase DBP2
Length=546 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 20/138 (14%) Query 630 TILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687 T++F T+ + D + ++ +G P L+ G +Q + +L F+ Sbjct 363 TLIFASTKRMCDDITKYLREDGWPALAI--------HGDKDQR------ERDWVLQEFR- 407 Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNV---IKMIQTRGRGRARGSKCFLLTSN 744 +G I++AT VA GID+ N VI Y+ GN+ + I GR A G+ T Sbjct 408 NGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQ 467 Query 745 AGVIEKEQINMYKEKMMN 762 + + I++ +E N Sbjct 468 NKGLGAKLISIMREANQN 485 Score = 40.4 bits (93), Expect = 0.100, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 4/136 (3%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFP---QGQKGKVVFFAN 298 KP Q + A+ G++ + A TG GKT L H+ P G V+ A Sbjct 135 KPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAP 194 Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358 + Q ++ SK+ R T + G ++ + + ++I+I TP L++ L+ G Sbjct 195 TRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIG 254 Query 359 TIPSLSIFTLMIFDEC 374 +L T ++ DE Sbjct 255 KT-NLKRVTYLVLDEA 269
>8ark_A A ATP-dependent RNA helicase DBP2
Length=546 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 20/138 (14%) Query 630 TILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687 T++F T+ + D + ++ +G P L+ G +Q + +L F+ Sbjct 363 TLIFASTKRMCDDITKYLREDGWPALAI--------HGDKDQR------ERDWVLQEFR- 407 Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNV---IKMIQTRGRGRARGSKCFLLTSN 744 +G I++AT VA GID+ N VI Y+ GN+ + I GR A G+ T Sbjct 408 NGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQ 467 Query 745 AGVIEKEQINMYKEKMMN 762 + + I++ +E N Sbjct 468 NKGLGAKLISIMREANQN 485 Score = 40.4 bits (93), Expect = 0.090, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 4/136 (3%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFP---QGQKGKVVFFAN 298 KP Q + A+ G++ + A TG GKT L H+ P G V+ A Sbjct 135 KPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAP 194 Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358 + Q ++ SK+ R T + G ++ + + ++I+I TP L++ L+ G Sbjct 195 TRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIG 254 Query 359 TIPSLSIFTLMIFDEC 374 +L T ++ DE Sbjct 255 KT-NLKRVTYLVLDEA 269
>8ark_B B ATP-dependent RNA helicase DBP2
Length=546 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 20/138 (14%) Query 630 TILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687 T++F T+ + D + ++ +G P L+ G +Q + +L F+ Sbjct 363 TLIFASTKRMCDDITKYLREDGWPALAI--------HGDKDQR------ERDWVLQEFR- 407 Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNV---IKMIQTRGRGRARGSKCFLLTSN 744 +G I++AT VA GID+ N VI Y+ GN+ + I GR A G+ T Sbjct 408 NGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQ 467 Query 745 AGVIEKEQINMYKEKMMN 762 + + I++ +E N Sbjct 468 NKGLGAKLISIMREANQN 485 Score = 40.4 bits (93), Expect = 0.090, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 4/136 (3%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFP---QGQKGKVVFFAN 298 KP Q + A+ G++ + A TG GKT L H+ P G V+ A Sbjct 135 KPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAP 194 Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358 + Q ++ SK+ R T + G ++ + + ++I+I TP L++ L+ G Sbjct 195 TRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIG 254 Query 359 TIPSLSIFTLMIFDEC 374 +L T ++ DE Sbjct 255 KT-NLKRVTYLVLDEA 269
>8arp_E E ATP-dependent RNA helicase DBP2
Length=546 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 20/138 (14%) Query 630 TILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687 T++F T+ + D + ++ +G P L+ G +Q + +L F+ Sbjct 363 TLIFASTKRMCDDITKYLREDGWPALAI--------HGDKDQR------ERDWVLQEFR- 407 Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNV---IKMIQTRGRGRARGSKCFLLTSN 744 +G I++AT VA GID+ N VI Y+ GN+ + I GR A G+ T Sbjct 408 NGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQ 467 Query 745 AGVIEKEQINMYKEKMMN 762 + + I++ +E N Sbjct 468 NKGLGAKLISIMREANQN 485 Score = 40.4 bits (93), Expect = 0.096, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 4/136 (3%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFP---QGQKGKVVFFAN 298 KP Q + A+ G++ + A TG GKT L H+ P G V+ A Sbjct 135 KPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAP 194 Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358 + Q ++ SK+ R T + G ++ + + ++I+I TP L++ L+ G Sbjct 195 TRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIG 254 Query 359 TIPSLSIFTLMIFDEC 374 +L T ++ DE Sbjct 255 KT-NLKRVTYLVLDEA 269
>8arp_D D ATP-dependent RNA helicase DBP2
Length=546 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 20/138 (14%) Query 630 TILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687 T++F T+ + D + ++ +G P L+ G +Q + +L F+ Sbjct 363 TLIFASTKRMCDDITKYLREDGWPALAI--------HGDKDQR------ERDWVLQEFR- 407 Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNV---IKMIQTRGRGRARGSKCFLLTSN 744 +G I++AT VA GID+ N VI Y+ GN+ + I GR A G+ T Sbjct 408 NGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQ 467 Query 745 AGVIEKEQINMYKEKMMN 762 + + I++ +E N Sbjct 468 NKGLGAKLISIMREANQN 485 Score = 40.4 bits (93), Expect = 0.096, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 4/136 (3%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFP---QGQKGKVVFFAN 298 KP Q + A+ G++ + A TG GKT L H+ P G V+ A Sbjct 135 KPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAP 194 Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358 + Q ++ SK+ R T + G ++ + + ++I+I TP L++ L+ G Sbjct 195 TRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIG 254 Query 359 TIPSLSIFTLMIFDEC 374 +L T ++ DE Sbjct 255 KT-NLKRVTYLVLDEA 269
>8arp_B B ATP-dependent RNA helicase DBP2
Length=546 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 20/138 (14%) Query 630 TILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687 T++F T+ + D + ++ +G P L+ G +Q + +L F+ Sbjct 363 TLIFASTKRMCDDITKYLREDGWPALAI--------HGDKDQR------ERDWVLQEFR- 407 Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNV---IKMIQTRGRGRARGSKCFLLTSN 744 +G I++AT VA GID+ N VI Y+ GN+ + I GR A G+ T Sbjct 408 NGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQ 467 Query 745 AGVIEKEQINMYKEKMMN 762 + + I++ +E N Sbjct 468 NKGLGAKLISIMREANQN 485 Score = 40.4 bits (93), Expect = 0.096, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 4/136 (3%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFP---QGQKGKVVFFAN 298 KP Q + A+ G++ + A TG GKT L H+ P G V+ A Sbjct 135 KPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAP 194 Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358 + Q ++ SK+ R T + G ++ + + ++I+I TP L++ L+ G Sbjct 195 TRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIG 254 Query 359 TIPSLSIFTLMIFDEC 374 +L T ++ DE Sbjct 255 KT-NLKRVTYLVLDEA 269
>6y53_D p Probable ATP-dependent RNA helicase DDX46
Length=1031 Score = 42.4 bits (98), Expect = 0.029, Method: Compositional matrix adjust. Identities = 37/138 (27%), Positives = 62/138 (45%), Gaps = 7/138 (5%) Query 242 KPRNYQLELALPA-MKGKNTIICAPTGCGKTFVSLLICEHHL---KKFPQGQKGKVVFFA 297 KP Q + A+PA M G++ I A TG GKT LL H+ + +G+ V Sbjct 394 KPTPIQTQ-AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMT 452 Query 298 NQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNL-- 355 + Q K+ + G RV + G T + + ++ +II+ TP +++ L Sbjct 453 PTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAA 512 Query 356 KKGTIPSLSIFTLMIFDE 373 G + +L T ++ DE Sbjct 513 NSGRVTNLRRVTYVVLDE 530
>8dga_A A Endoribonuclease Dcr-1
Length=2249 Score = 42.4 bits (98), Expect = 0.029, Method: Compositional matrix adjust. Identities = 47/248 (19%), Positives = 110/248 (44%), Gaps = 17/248 (7%) Query 241 FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKV-VFFANQ 299 F PR++Q+EL A + +NTIIC K F++L + + ++ + G+V V+ + + Sbjct 15 FTPRDFQVELLATAYE-RNTIICLGHRSSKEFIALKLLQELSRR--ARRHGRVSVYLSCE 71 Query 300 IPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 + + S+++ RV +P + + + IL P+ + L+ Sbjct 72 VGTSTEPCSIYTMLTHLTDLRV--WQEQPDMQIPFDHCWTDYHVSILRPEGFLYLLETRE 129 Query 360 IPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKN 419 + LS L++ ++CH+++ Y I + + + P+++GL G + Sbjct 130 L-LLSRVELIVLEDCHDSAV---YQRIRPLFENHIMPAPPADRPRILGL-----AGPLHS 180 Query 420 TDEALDYICKLCASLDASVIATVKHNLEELEQVVY--KPQKFFRKVESRISDKFKYIIAQ 477 L + + A+L+ SV+ ++ + + + Y +P ++ + D+ ++A Sbjct 181 AGCELQQLSAMLATLEQSVLCQIESASDIVTVLRYCSRPHEYIVQCAPFEMDELSLVLAD 240 Query 478 LMRDTESL 485 ++ +S Sbjct 241 VLNTHKSF 248 Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 0/50 (0%) Query 694 LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTS 743 LI TSV +EGID+ +CNLV+ ++ +Q +GR RA + +L + Sbjct 566 LIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVA 615
>3jcm_I N Pre-mRNA-splicing helicase BRR2
Length=2163 Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust. Identities = 49/199 (25%), Positives = 90/199 (45%), Gaps = 30/199 (15%) Query 228 PPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC----EHHL 282 P SE + N P + + + A +G N +ICAPTG GKT ++LL HH Sbjct 492 PSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKALSHHY 543 Query 283 KKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQI 337 P+ +K K+V+ A + ++Q F + G +V ++G + + +QI Sbjct 544 N--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLSRKQI 599 Query 338 VENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFNYLDQ 393 E +++ TP+ + + + + L+I DE H + P +++ + Sbjct 600 DETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVARTFWAS 658 Query 394 KLGGSSGPLPQVIGLTASV 412 K G P++IGL+A++ Sbjct 659 KYGQE---YPRIIGLSATL 674
>5m5p_A A Pre-mRNA-splicing helicase BRR2
Length=1897 Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%) Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278 + + P SE + N P + + + A +G N +ICAPTG GKT ++LL Sbjct 222 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 273 Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333 HH P+ +K K+V+ A + ++Q F + G +V ++G + + Sbjct 274 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 329 Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389 +QI E +++ TP+ + + + + L+I DE H + P +++ Sbjct 330 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 388 Query 390 YLDQKLGGSSGPLPQVIGLTASV 412 + K G P++IGL+A++ Sbjct 389 FWASKYGQE---YPRIIGLSATL 408
>5dca_A A Pre-mRNA-splicing helicase BRR2
Length=1948 Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%) Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278 + + P SE + N P + + + A +G N +ICAPTG GKT ++LL Sbjct 285 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 336 Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333 HH P+ +K K+V+ A + ++Q F + G +V ++G + + Sbjct 337 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 392 Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389 +QI E +++ TP+ + + + + L+I DE H + P +++ Sbjct 393 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 451 Query 390 YLDQKLGGSSGPLPQVIGLTASV 412 + K G P++IGL+A++ Sbjct 452 FWASKYGQE---YPRIIGLSATL 471
>5m5p_C C Pre-mRNA-splicing helicase BRR2
Length=1897 Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%) Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278 + + P SE + N P + + + A +G N +ICAPTG GKT ++LL Sbjct 222 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 273 Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333 HH P+ +K K+V+ A + ++Q F + G +V ++G + + Sbjct 274 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 329 Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389 +QI E +++ TP+ + + + + L+I DE H + P +++ Sbjct 330 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 388 Query 390 YLDQKLGGSSGPLPQVIGLTASV 412 + K G P++IGL+A++ Sbjct 389 FWASKYGQE---YPRIIGLSATL 408
>5a9f_A A DNA POLYMERASE THETA
Length=830 Score = 42.0 bits (97), Expect = 0.034, Method: Compositional matrix adjust. Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%) Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313 ++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K Sbjct 41 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 96 Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370 F+ G +V G G+T+ + + DI + T L+N L + + + +++ Sbjct 97 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 150 Query 371 FDECHNTSKQH 381 DE H H Sbjct 151 VDELHMLGDSH 161
>5lqw_C C Pre-mRNA-splicing helicase BRR2
Length=2163 Score = 42.0 bits (97), Expect = 0.036, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%) Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278 + + P SE + N P + + + A +G N +ICAPTG GKT ++LL Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539 Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333 HH P+ +K K+V+ A + ++Q F + G +V ++G + + Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595 Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389 +QI E +++ TP+ + + + + L+I DE H + P +++ Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654 Query 390 YLDQKLGGSSGPLPQVIGLTASV 412 + K G P++IGL+A++ Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>9bha_A A DNA polymerase theta
Length=893 Score = 42.0 bits (97), Expect = 0.036, Method: Compositional matrix adjust. Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%) Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313 ++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159 Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370 F+ G +V G G+T+ + + DI + T L+N L + + + +++ Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213 Query 371 FDECHNTSKQH 381 DE H H Sbjct 214 VDELHMLGDSH 224
>9bha_B B DNA polymerase theta
Length=893 Score = 42.0 bits (97), Expect = 0.037, Method: Compositional matrix adjust. Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%) Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313 ++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159 Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370 F+ G +V G G+T+ + + DI + T L+N L + + + +++ Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213 Query 371 FDECHNTSKQH 381 DE H H Sbjct 214 VDELHMLGDSH 224
>5m52_A A Pre-mRNA-splicing helicase BRR2
Length=2163 Score = 42.0 bits (97), Expect = 0.037, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%) Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278 + + P SE + N P + + + A +G N +ICAPTG GKT ++LL Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539 Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333 HH P+ +K K+V+ A + ++Q F + G +V ++G + + Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595 Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389 +QI E +++ TP+ + + + + L+I DE H + P +++ Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654 Query 390 YLDQKLGGSSGPLPQVIGLTASV 412 + K G P++IGL+A++ Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>5gan_I B Pre-mRNA-splicing helicase BRR2
Length=2163 Score = 42.0 bits (97), Expect = 0.037, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%) Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278 + + P SE + N P + + + A +G N +ICAPTG GKT ++LL Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539 Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333 HH P+ +K K+V+ A + ++Q F + G +V ++G + + Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595 Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389 +QI E +++ TP+ + + + + L+I DE H + P +++ Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654 Query 390 YLDQKLGGSSGPLPQVIGLTASV 412 + K G P++IGL+A++ Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>5m52_C B Pre-mRNA-splicing helicase BRR2
Length=2163 Score = 42.0 bits (97), Expect = 0.038, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%) Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278 + + P SE + N P + + + A +G N +ICAPTG GKT ++LL Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539 Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333 HH P+ +K K+V+ A + ++Q F + G +V ++G + + Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595 Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389 +QI E +++ TP+ + + + + L+I DE H + P +++ Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654 Query 390 YLDQKLGGSSGPLPQVIGLTASV 412 + K G P++IGL+A++ Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>9bh9_A A DNA polymerase theta
Length=893 Score = 42.0 bits (97), Expect = 0.038, Method: Compositional matrix adjust. Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%) Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313 ++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159 Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370 F+ G +V G G+T+ + + DI + T L+N L + + + +++ Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213 Query 371 FDECHNTSKQH 381 DE H H Sbjct 214 VDELHMLGDSH 224
>9bh9_B B DNA polymerase theta
Length=893 Score = 42.0 bits (97), Expect = 0.038, Method: Compositional matrix adjust. Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%) Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313 ++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159 Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370 F+ G +V G G+T+ + + DI + T L+N L + + + +++ Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213 Query 371 FDECHNTSKQH 381 DE H H Sbjct 214 VDELHMLGDSH 224
>9bh8_A A DNA polymerase theta
Length=893 Score = 42.0 bits (97), Expect = 0.038, Method: Compositional matrix adjust. Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%) Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313 ++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159 Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370 F+ G +V G G+T+ + + DI + T L+N L + + + +++ Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213 Query 371 FDECHNTSKQH 381 DE H H Sbjct 214 VDELHMLGDSH 224
>9bh8_B B DNA polymerase theta
Length=893 Score = 42.0 bits (97), Expect = 0.038, Method: Compositional matrix adjust. Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%) Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313 ++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159 Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370 F+ G +V G G+T+ + + DI + T L+N L + + + +++ Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213 Query 371 FDECHNTSKQH 381 DE H H Sbjct 214 VDELHMLGDSH 224
>5aga_A A DNA POLYMERASE THETA
Length=830 Score = 42.0 bits (97), Expect = 0.038, Method: Compositional matrix adjust. Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%) Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313 ++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K Sbjct 41 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 96 Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370 F+ G +V G G+T+ + + DI + T L+N L + + + +++ Sbjct 97 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 150 Query 371 FDECHNTSKQH 381 DE H H Sbjct 151 VDELHMLGDSH 161
>5gm6_B B Pre-mRNA-splicing helicase BRR2
Length=2163 Score = 42.0 bits (97), Expect = 0.038, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%) Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278 + + P SE + N P + + + A +G N +ICAPTG GKT ++LL Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539 Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333 HH P+ +K K+V+ A + ++Q F + G +V ++G + + Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595 Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389 +QI E +++ TP+ + + + + L+I DE H + P +++ Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654 Query 390 YLDQKLGGSSGPLPQVIGLTASV 412 + K G P++IGL+A++ Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>6uv1_A A Probable ATP-dependent RNA helicase DDX17
Length=448 Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 17/115 (15%) Query 618 LQEEYHLNPETITILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTL 675 L EE E TI+FV+T+ D L + +G P + G +Q Sbjct 301 LMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCI--------HGDKSQ------ 346 Query 676 PAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 P + +L+ F+ SG ILIAT VA G+D+ VI Y+Y + + GR Sbjct 347 PERDWVLNEFR-SGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGR 400
>4bgd_A A PRE-MRNA-SPLICING HELICASE BRR2
Length=1722 Score = 42.0 bits (97), Expect = 0.039, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%) Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278 + + P SE + N P + + + A +G N +ICAPTG GKT ++LL Sbjct 47 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 98 Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333 HH P+ +K K+V+ A + ++Q F + G +V ++G + + Sbjct 99 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 154 Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389 +QI E +++ TP+ + + + + L+I DE H + P +++ Sbjct 155 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 213 Query 390 YLDQKLGGSSGPLPQVIGLTASV 412 + K G P++IGL+A++ Sbjct 214 FWASKYGQE---YPRIIGLSATL 233
>5gao_I B Pre-mRNA-splicing helicase BRR2
Length=2163 Score = 42.0 bits (97), Expect = 0.039, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%) Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278 + + P SE + N P + + + A +G N +ICAPTG GKT ++LL Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539 Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333 HH P+ +K K+V+ A + ++Q F + G +V ++G + + Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595 Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389 +QI E +++ TP+ + + + + L+I DE H + P +++ Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654 Query 390 YLDQKLGGSSGPLPQVIGLTASV 412 + K G P++IGL+A++ Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>5lj5_G B Pre-mRNA-splicing helicase BRR2
Length=2163 Score = 42.0 bits (97), Expect = 0.039, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%) Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278 + + P SE + N P + + + A +G N +ICAPTG GKT ++LL Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539 Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333 HH P+ +K K+V+ A + ++Q F + G +V ++G + + Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595 Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389 +QI E +++ TP+ + + + + L+I DE H + P +++ Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654 Query 390 YLDQKLGGSSGPLPQVIGLTASV 412 + K G P++IGL+A++ Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>7b9v_E B Pre-mRNA-splicing helicase BRR2
Length=2163 Score = 42.0 bits (97), Expect = 0.039, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%) Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278 + + P SE + N P + + + A +G N +ICAPTG GKT ++LL Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539 Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333 HH P+ +K K+V+ A + ++Q F + G +V ++G + + Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595 Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389 +QI E +++ TP+ + + + + L+I DE H + P +++ Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654 Query 390 YLDQKLGGSSGPLPQVIGLTASV 412 + K G P++IGL+A++ Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>5a9j_C C DNA POLYMERASE THETA
Length=896 Score = 42.0 bits (97), Expect = 0.040, Method: Compositional matrix adjust. Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%) Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313 ++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K Sbjct 107 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 162 Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370 F+ G +V G G+T+ + + DI + T L+N L + + + +++ Sbjct 163 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 216 Query 371 FDECHNTSKQH 381 DE H H Sbjct 217 VDELHMLGDSH 227
>5zwm_AA D Pre-mRNA-splicing helicase BRR2
Length=2163 Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%) Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278 + + P SE + N P + + + A +G N +ICAPTG GKT ++LL Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539 Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333 HH P+ +K K+V+ A + ++Q F + G +V ++G + + Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595 Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389 +QI E +++ TP+ + + + + L+I DE H + P +++ Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654 Query 390 YLDQKLGGSSGPLPQVIGLTASV 412 + K G P++IGL+A++ Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>5nrl_I B Pre-mRNA-splicing helicase BRR2
Length=2163 Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%) Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278 + + P SE + N P + + + A +G N +ICAPTG GKT ++LL Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539 Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333 HH P+ +K K+V+ A + ++Q F + G +V ++G + + Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595 Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389 +QI E +++ TP+ + + + + L+I DE H + P +++ Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654 Query 390 YLDQKLGGSSGPLPQVIGLTASV 412 + K G P++IGL+A++ Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>5zwo_AA D Pre-mRNA-splicing helicase BRR2
Length=2163 Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%) Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278 + + P SE + N P + + + A +G N +ICAPTG GKT ++LL Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539 Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333 HH P+ +K K+V+ A + ++Q F + G +V ++G + + Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595 Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389 +QI E +++ TP+ + + + + L+I DE H + P +++ Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654 Query 390 YLDQKLGGSSGPLPQVIGLTASV 412 + K G P++IGL+A++ Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>9bh7_B B DNA polymerase theta
Length=893 Score = 41.6 bits (96), Expect = 0.041, Method: Compositional matrix adjust. Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%) Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313 ++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159 Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370 F+ G +V G G+T+ + + DI + T L+N L + + + +++ Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213 Query 371 FDECHNTSKQH 381 DE H H Sbjct 214 VDELHMLGDSH 224
>9bh7_A A DNA polymerase theta
Length=893 Score = 41.6 bits (96), Expect = 0.041, Method: Compositional matrix adjust. Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%) Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313 ++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159 Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370 F+ G +V G G+T+ + + DI + T L+N L + + + +++ Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213 Query 371 FDECHNTSKQH 381 DE H H Sbjct 214 VDELHMLGDSH 224
>5a9j_B B DNA POLYMERASE THETA
Length=896 Score = 41.6 bits (96), Expect = 0.042, Method: Compositional matrix adjust. Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%) Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313 ++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K Sbjct 107 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 162 Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370 F+ G +V G G+T+ + + DI + T L+N L + + + +++ Sbjct 163 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 216 Query 371 FDECHNTSKQH 381 DE H H Sbjct 217 VDELHMLGDSH 227
>6uv1_B B Probable ATP-dependent RNA helicase DDX17
Length=448 Score = 41.6 bits (96), Expect = 0.042, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 17/115 (15%) Query 618 LQEEYHLNPETITILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTL 675 L EE E TI+FV+T+ D L + +G P + G +Q Sbjct 301 LMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCI--------HGDKSQ------ 346 Query 676 PAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 P + +L+ F+ SG ILIAT VA G+D+ VI Y+Y + + GR Sbjct 347 PERDWVLNEFR-SGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGR 400
>6uv2_A A Probable ATP-dependent RNA helicase DDX17
Length=448 Score = 41.6 bits (96), Expect = 0.042, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 17/115 (15%) Query 618 LQEEYHLNPETITILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTL 675 L EE E TI+FV+T+ D L + +G P + G +Q Sbjct 301 LMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCI--------HGDKSQ------ 346 Query 676 PAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 P + +L+ F+ SG ILIAT VA G+D+ VI Y+Y + + GR Sbjct 347 PERDWVLNEFR-SGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGR 400
>9bh6_A A DNA polymerase theta
Length=893 Score = 41.6 bits (96), Expect = 0.043, Method: Compositional matrix adjust. Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%) Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313 ++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159 Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370 F+ G +V G G+T+ + + DI + T L+N L + + + +++ Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213 Query 371 FDECHNTSKQH 381 DE H H Sbjct 214 VDELHMLGDSH 224
>9bh6_D D DNA polymerase theta
Length=893 Score = 41.6 bits (96), Expect = 0.043, Method: Compositional matrix adjust. Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%) Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313 ++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159 Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370 F+ G +V G G+T+ + + DI + T L+N L + + + +++ Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213 Query 371 FDECHNTSKQH 381 DE H H Sbjct 214 VDELHMLGDSH 224
>9bh6_B B DNA polymerase theta
Length=893 Score = 41.6 bits (96), Expect = 0.043, Method: Compositional matrix adjust. Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%) Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313 ++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159 Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370 F+ G +V G G+T+ + + DI + T L+N L + + + +++ Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213 Query 371 FDECHNTSKQH 381 DE H H Sbjct 214 VDELHMLGDSH 224
>9bh6_C C DNA polymerase theta
Length=893 Score = 41.6 bits (96), Expect = 0.043, Method: Compositional matrix adjust. Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%) Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313 ++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K Sbjct 104 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 159 Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370 F+ G +V G G+T+ + + DI + T L+N L + + + +++ Sbjct 160 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 213 Query 371 FDECHNTSKQH 381 DE H H Sbjct 214 VDELHMLGDSH 224
>5a9j_D D DNA POLYMERASE THETA
Length=896 Score = 41.6 bits (96), Expect = 0.043, Method: Compositional matrix adjust. Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%) Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313 ++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K Sbjct 107 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 162 Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370 F+ G +V G G+T+ + + DI + T L+N L + + + +++ Sbjct 163 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 216 Query 371 FDECHNTSKQH 381 DE H H Sbjct 217 VDELHMLGDSH 227
>4kbf_A A Heat resistant RNA dependent ATPase
Length=365 Score = 41.2 bits (95), Expect = 0.044, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 79/185 (43%), Gaps = 34/185 (18%) Query 563 ALDYLKDF---FSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNE----NPKLEDLC 615 ALDYL+ S V A DE ++ L+ FEE+++ L S + PS + + L Sbjct 131 ALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSAT-PPSRQTLLFSATLPSWA 189 Query 616 FILQEEYHLNPETITIL-----FVKTRALVDALKNWIEGNPKLSFL----KPGILTGRGK 666 L E Y NP I ++ + A+ ++ +E L ++ + + T Sbjct 190 KRLAERYMKNPVLINVIKDEPVTYEEEAVPAPVRGRLEVLSDLLYVASPDRAMVFTRTKA 249 Query 667 TNQNTGMTL-----PAQKC-----------ILDAFKASGDHNILIATSVADEGIDIAQCN 710 + L PAQ +L AF+ G+ +L+AT VA G+DI Q + Sbjct 250 ETEEIAQGLLRLGHPAQALHGDLSQGERERVLGAFR-QGEVRVLVATDVAARGLDIPQVD 308 Query 711 LVILY 715 LV+ Y Sbjct 309 LVVHY 313 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 35/127 (28%), Positives = 58/127 (46%), Gaps = 7/127 (6%) Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308 ALP A++GK+ I A TG GKT +L I E +G+K + + P E Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVL---TPTRELALQ 87 Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367 V S+ + +V + G T E ++ D ++ TP ++ L++G + LS Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146 Query 368 LMIFDEC 374 + + DE Sbjct 147 VAVLDEA 153
>4kbf_B B Heat resistant RNA dependent ATPase
Length=365 Score = 41.2 bits (95), Expect = 0.044, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 79/185 (43%), Gaps = 34/185 (18%) Query 563 ALDYLKDF---FSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNE----NPKLEDLC 615 ALDYL+ S V A DE ++ L+ FEE+++ L S + PS + + L Sbjct 131 ALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSAT-PPSRQTLLFSATLPSWA 189 Query 616 FILQEEYHLNPETITIL-----FVKTRALVDALKNWIEGNPKLSFL----KPGILTGRGK 666 L E Y NP I ++ + A+ ++ +E L ++ + + T Sbjct 190 KRLAERYMKNPVLINVIKDEPVTYEEEAVPAPVRGRLEVLSDLLYVASPDRAMVFTRTKA 249 Query 667 TNQNTGMTL-----PAQKC-----------ILDAFKASGDHNILIATSVADEGIDIAQCN 710 + L PAQ +L AF+ G+ +L+AT VA G+DI Q + Sbjct 250 ETEEIAQGLLRLGHPAQALHGDLSQGERERVLGAFR-QGEVRVLVATDVAARGLDIPQVD 308 Query 711 LVILY 715 LV+ Y Sbjct 309 LVVHY 313 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 35/127 (28%), Positives = 58/127 (46%), Gaps = 7/127 (6%) Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308 ALP A++GK+ I A TG GKT +L I E +G+K + + P E Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVL---TPTRELALQ 87 Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367 V S+ + +V + G T E ++ D ++ TP ++ L++G + LS Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146 Query 368 LMIFDEC 374 + + DE Sbjct 147 VAVLDEA 153
>4kbg_B B Heat resistant RNA dependent ATPase
Length=365 Score = 41.2 bits (95), Expect = 0.044, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 79/185 (43%), Gaps = 34/185 (18%) Query 563 ALDYLKDF---FSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNE----NPKLEDLC 615 ALDYL+ S V A DE ++ L+ FEE+++ L S + PS + + L Sbjct 131 ALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSAT-PPSRQTLLFSATLPSWA 189 Query 616 FILQEEYHLNPETITIL-----FVKTRALVDALKNWIEGNPKLSFL----KPGILTGRGK 666 L E Y NP I ++ + A+ ++ +E L ++ + + T Sbjct 190 KRLAERYMKNPVLINVIKDEPVTYEEEAVPAPVRGRLEVLSDLLYVASPDRAMVFTRTKA 249 Query 667 TNQNTGMTL-----PAQKC-----------ILDAFKASGDHNILIATSVADEGIDIAQCN 710 + L PAQ +L AF+ G+ +L+AT VA G+DI Q + Sbjct 250 ETEEIAQGLLRLGHPAQALHGDLSQGERERVLGAFR-QGEVRVLVATDVAARGLDIPQVD 308 Query 711 LVILY 715 LV+ Y Sbjct 309 LVVHY 313 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 35/127 (28%), Positives = 58/127 (46%), Gaps = 7/127 (6%) Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308 ALP A++GK+ I A TG GKT +L I E +G+K + + P E Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVL---TPTRELALQ 87 Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367 V S+ + +V + G T E ++ D ++ TP ++ L++G + LS Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146 Query 368 LMIFDEC 374 + + DE Sbjct 147 VAVLDEA 153
>5a9j_A A DNA POLYMERASE THETA
Length=896 Score = 41.6 bits (96), Expect = 0.044, Method: Compositional matrix adjust. Identities = 34/131 (26%), Positives = 61/131 (47%), Gaps = 13/131 (10%) Query 254 AMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKY 313 ++GKN + APT GKT V+ L+ LK+ + +K K +F + V +++K Sbjct 107 VLEGKNLVYSAPTSAGKTLVAELLI---LKRVLEMRK-KALFILPFVSVAKEKKYYLQSL 162 Query 314 FERHGYRVTGISGATAENVPVEQIVENNDIIILT---PQILVNNLKKGTIPSLSIFTLMI 370 F+ G +V G G+T+ + + DI + T L+N L + + + +++ Sbjct 163 FQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEEN--KMDLLGMVV 216 Query 371 FDECHNTSKQH 381 DE H H Sbjct 217 VDELHMLGDSH 227
>7dco_D D BRR2 isoform 1
Length=2163 Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 30/203 (15%) Query 224 ENSCPPSEVSDTNLYSPFKPRNYQLELALPAMKG-KNTIICAPTGCGKTFVSLLIC---- 278 + + P SE + N P + + + A +G N +ICAPTG GKT ++LL Sbjct 488 QEAFPSSETTSLN---PIQSKVFH-----AAFEGDSNMLICAPTGSGKTNIALLTVLKAL 539 Query 279 EHHLKKFPQGQK-----GKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 333 HH P+ +K K+V+ A + ++Q F + G +V ++G + + Sbjct 540 SHHYN--PKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDS--RLS 595 Query 334 VEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMIFDECHNT-SKQHPY--NMIMFN 389 +QI E +++ TP+ + + + + L+I DE H + P +++ Sbjct 596 RKQIDETQ-VLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVART 654 Query 390 YLDQKLGGSSGPLPQVIGLTASV 412 + K G P++IGL+A++ Sbjct 655 FWASKYGQE---YPRIIGLSATL 674
>6uv4_A A Probable ATP-dependent RNA helicase DDX17
Length=448 Score = 41.2 bits (95), Expect = 0.047, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 17/115 (15%) Query 618 LQEEYHLNPETITILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTL 675 L EE E TI+FV+T+ D L + +G P + G +Q Sbjct 301 LMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCI--------HGDKSQ------ 346 Query 676 PAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 P + +L+ F+ SG ILIAT VA G+D+ VI Y+Y + + GR Sbjct 347 PERDWVLNEFR-SGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGR 400
>6uv3_A A Probable ATP-dependent RNA helicase DDX17
Length=448 Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 17/115 (15%) Query 618 LQEEYHLNPETITILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTL 675 L EE E TI+FV+T+ D L + +G P + G +Q Sbjct 301 LMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCI--------HGDKSQ------ 346 Query 676 PAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 P + +L+ F+ SG ILIAT VA G+D+ VI Y+Y + + GR Sbjct 347 PERDWVLNEFR-SGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGR 400
>2z0m_A A 337aa long hypothetical ATP-dependent RNA helicase deaD
Length=337 Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust. Identities = 38/127 (30%), Positives = 56/127 (44%), Gaps = 17/127 (13%) Query 252 LPAM-KGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVF 310 +P M +GKN ++ A TG GKT + + G K VV P E + V Sbjct 25 IPLMLQGKNVVVRAKTGSGKT------AAYAIPILELGMKSLVV-----TPTRELTRQVA 73 Query 311 SKYFERHGY---RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367 S + Y +V + G + + V N DI++ TP L++ KG I LS F Sbjct 74 SHIRDIGRYMDTKVAEVYGGMPYKAQINR-VRNADIVVATPGRLLDLWSKGVI-DLSSFE 131 Query 368 LMIFDEC 374 ++I DE Sbjct 132 IVIIDEA 138
>6znq_A A Uncharacterized ATP-dependent helicase YprA
Length=751 Score = 41.2 bits (95), Expect = 0.066, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 8/122 (7%) Query 630 TILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASG 689 TI+F ++R V+ + + I+ +L + G + RG G LP ++ ++ G Sbjct 293 TIVFARSRVRVEIILSHIQ---ELVKKEIGTKSIRGYR----GGYLPKERREIERGLREG 345 Query 690 DHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVI 748 D +++T+ + G+DI Q + ++ Y G+V Q GR GR G ++ +N+ I Sbjct 346 DILGVVSTNALELGVDIGQLQVCVMTGYPGSVASAWQQAGRAGRRHGESLIIMVANSTPI 405 Query 749 EK 750 ++ Sbjct 406 DQ 407
>6znp_A A Uncharacterized ATP-dependent helicase YprA
Length=751 Score = 41.2 bits (95), Expect = 0.066, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 8/122 (7%) Query 630 TILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASG 689 TI+F ++R V+ + + I+ +L + G + RG G LP ++ ++ G Sbjct 293 TIVFARSRVRVEIILSHIQ---ELVKKEIGTKSIRGYR----GGYLPKERREIERGLREG 345 Query 690 DHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVI 748 D +++T+ + G+DI Q + ++ Y G+V Q GR GR G ++ +N+ I Sbjct 346 DILGVVSTNALELGVDIGQLQVCVMTGYPGSVASAWQQAGRAGRRHGESLIIMVANSTPI 405 Query 749 EK 750 ++ Sbjct 406 DQ 407
>6znq_B B Uncharacterized ATP-dependent helicase YprA
Length=751 Score = 40.8 bits (94), Expect = 0.078, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 8/122 (7%) Query 630 TILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASG 689 TI+F ++R V+ + + I+ +L + G + RG G LP ++ ++ G Sbjct 293 TIVFARSRVRVEIILSHIQ---ELVKKEIGTKSIRGYR----GGYLPKERREIERGLREG 345 Query 690 DHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVI 748 D +++T+ + G+DI Q + ++ Y G+V Q GR GR G ++ +N+ I Sbjct 346 DILGVVSTNALELGVDIGQLQVCVMTGYPGSVASAWQQAGRAGRRHGESLIIMVANSTPI 405 Query 749 EK 750 ++ Sbjct 406 DQ 407
>6znp_B B Uncharacterized ATP-dependent helicase YprA
Length=751 Score = 40.8 bits (94), Expect = 0.084, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 8/122 (7%) Query 630 TILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASG 689 TI+F ++R V+ + + I+ +L + G + RG G LP ++ ++ G Sbjct 293 TIVFARSRVRVEIILSHIQ---ELVKKEIGTKSIRGYR----GGYLPKERREIERGLREG 345 Query 690 DHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKCFLLTSNAGVI 748 D +++T+ + G+DI Q + ++ Y G+V Q GR GR G ++ +N+ I Sbjct 346 DILGVVSTNALELGVDIGQLQVCVMTGYPGSVASAWQQAGRAGRRHGESLIIMVANSTPI 405 Query 749 EK 750 ++ Sbjct 406 DQ 407
>8ark_C C ATP-dependent RNA helicase DBP2
Length=546 Score = 40.4 bits (93), Expect = 0.10, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 4/136 (3%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFP---QGQKGKVVFFAN 298 KP Q + A+ G++ + A TG GKT L H+ P G V+ A Sbjct 135 KPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAP 194 Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358 + Q ++ SK+ R T + G ++ + + ++I+I TP L++ L+ G Sbjct 195 TRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIG 254 Query 359 TIPSLSIFTLMIFDEC 374 +L T ++ DE Sbjct 255 KT-NLKRVTYLVLDEA 269
>8he5_O O DNA repair protein
Length=1094 Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 12/114 (11%) Query 630 TILFVKTRALVDALKNWIE-----GNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDA 684 T+LF +TR ++D L++++E G + F+ L G T ++ ++ ++D Sbjct 677 TLLFTQTRQMLDILESFLERLNAKGAEEEDFVPFKFLRMDGTT------SIGVRQSLVDV 730 Query 685 FKASGDHNI-LIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSK 737 F +N+ L+ T V G+++ N VI+Y+ N +Q R R G K Sbjct 731 FNNDPSYNVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDVQARERAWRLGQK 784
>7bdk_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747 Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLS-IFTLMI 370 K +G V ++G ++ + II+ TP+ +KG + + + L+I Sbjct 168 KRLATYGITVAELTGXXXXX---KEEISATQIIVCTPEKWDIITRKGXXXTYTQLVRLII 224 Query 371 FDECH 375 DE H Sbjct 225 LDEIH 229 Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>1fuk_A A EUKARYOTIC INITIATION FACTOR 4A
Length=165 Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust. Identities = 24/59 (41%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Query 675 LPAQK--CILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRG 731 LP Q+ I+ F+ SG ILI+T + GID+ Q +LVI Y+ N I GRG Sbjct 64 LPQQERDTIMKEFR-SGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRG 121
>4kbg_A A Heat resistant RNA dependent ATPase
Length=365 Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust. Identities = 35/127 (28%), Positives = 58/127 (46%), Gaps = 7/127 (6%) Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308 ALP A++GK+ I A TG GKT +L I E +G+K + + P E Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVL---TPTRELALQ 87 Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367 V S+ + +V + G T E ++ D ++ TP ++ L++G + LS Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146 Query 368 LMIFDEC 374 + + DE Sbjct 147 VAVLDEA 153
>7zuw_BC CA RQC trigger complex helicase SLH1
Length=1967 Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust. Identities = 46/178 (26%), Positives = 78/178 (44%), Gaps = 32/178 (18%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERH 317 +N + +PTG GKT V+ L H K FP K+V+ A + ++ + K Sbjct 1156 ENAFVGSPTGSGKTIVAELAIWHAFKTFP---GKKIVYIAPMKALVRERVDDWRK----- 1207 Query 318 GYRVTGISG-----ATAENVPVEQIVENNDIIILTPQ----ILVNNLKKGTIPSLSIFTL 368 ++T ++G T +++P + V + I+I TP+ I N + + +S L Sbjct 1208 --KITPVTGDKVVELTGDSLPDPKDVHDATIVITTPEKFDGISRNWQTRKFVQDVS---L 1262 Query 369 MIFDECH-NTSKQHP-YNMIM--FNYLDQ------KLGGSSGPLPQVIGLTASVGVGD 416 +I DE H S + P MI+ NY+ +L G S + + +GV D Sbjct 1263 IIMDEIHLLASDRGPILEMIVSRMNYISSQTKQPVRLLGMSTAVSNAYDMAGWLGVKD 1320 Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 27/192 (14%) Query 240 PFKPRNYQLELALPAM--KGKNTIICAPTGCGKTFVSLLICEHHLKKFP----------Q 287 P++ N L P +N +ICAPTG GKT ++LL + +K+F Q Sbjct 284 PYETLNQIQSLVYPVAYKTNENMLICAPTGAGKTDIALLTIINTIKQFXXXXXXXXIDIQ 343 Query 288 GQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISG---ATAENVPVEQIVENNDII 344 KV++ A + + FSK +V ++G T + Q +I Sbjct 344 YDDFKVIYVAPLKALAAEIVDKFSKKLAPFNIQVRELTGDMQLTKAEILATQ------VI 397 Query 345 ILTPQI--LVNNLKKGTIPSLSIFTLMIFDECH--NTSKQHPYNMIMFNYLDQKLGGSSG 400 + TP+ +V G +S L+I DE H + + ++ L Q SS Sbjct 398 VTTPEKWDVVTRKANGDNDLVSKVKLLIIDEVHLLHEDRGSVIETLVARTLRQV--ESSQ 455 Query 401 PLPQVIGLTASV 412 + ++IGL+A++ Sbjct 456 SMIRIIGLSATL 467
>7zrs_BC CA RQC trigger complex helicase SLH1
Length=1967 Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust. Identities = 46/178 (26%), Positives = 78/178 (44%), Gaps = 32/178 (18%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERH 317 +N + +PTG GKT V+ L H K FP K+V+ A + ++ + K Sbjct 1156 ENAFVGSPTGSGKTIVAELAIWHAFKTFP---GKKIVYIAPMKALVRERVDDWRK----- 1207 Query 318 GYRVTGISG-----ATAENVPVEQIVENNDIIILTPQ----ILVNNLKKGTIPSLSIFTL 368 ++T ++G T +++P + V + I+I TP+ I N + + +S L Sbjct 1208 --KITPVTGDKVVELTGDSLPDPKDVHDATIVITTPEKFDGISRNWQTRKFVQDVS---L 1262 Query 369 MIFDECH-NTSKQHP-YNMIM--FNYLDQ------KLGGSSGPLPQVIGLTASVGVGD 416 +I DE H S + P MI+ NY+ +L G S + + +GV D Sbjct 1263 IIMDEIHLLASDRGPILEMIVSRMNYISSQTKQPVRLLGMSTAVSNAYDMAGWLGVKD 1320 Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 27/192 (14%) Query 240 PFKPRNYQLELALPAM--KGKNTIICAPTGCGKTFVSLLICEHHLKKFP----------Q 287 P++ N L P +N +ICAPTG GKT ++LL + +K+F Q Sbjct 284 PYETLNQIQSLVYPVAYKTNENMLICAPTGAGKTDIALLTIINTIKQFXXXXXXXXIDIQ 343 Query 288 GQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISG---ATAENVPVEQIVENNDII 344 KV++ A + + FSK +V ++G T + Q +I Sbjct 344 YDDFKVIYVAPLKALAAEIVDKFSKKLAPFNIQVRELTGDMQLTKAEILATQ------VI 397 Query 345 ILTPQI--LVNNLKKGTIPSLSIFTLMIFDECH--NTSKQHPYNMIMFNYLDQKLGGSSG 400 + TP+ +V G +S L+I DE H + + ++ L Q SS Sbjct 398 VTTPEKWDVVTRKANGDNDLVSKVKLLIIDEVHLLHEDRGSVIETLVARTLRQV--ESSQ 455 Query 401 PLPQVIGLTASV 412 + ++IGL+A++ Sbjct 456 SMIRIIGLSATL 467
>7zpq_BC CA SLH1 isoform 1
Length=1967 Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust. Identities = 46/178 (26%), Positives = 78/178 (44%), Gaps = 32/178 (18%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERH 317 +N + +PTG GKT V+ L H K FP K+V+ A + ++ + K Sbjct 1156 ENAFVGSPTGSGKTIVAELAIWHAFKTFP---GKKIVYIAPMKALVRERVDDWRK----- 1207 Query 318 GYRVTGISG-----ATAENVPVEQIVENNDIIILTPQ----ILVNNLKKGTIPSLSIFTL 368 ++T ++G T +++P + V + I+I TP+ I N + + +S L Sbjct 1208 --KITPVTGDKVVELTGDSLPDPKDVHDATIVITTPEKFDGISRNWQTRKFVQDVS---L 1262 Query 369 MIFDECH-NTSKQHP-YNMIM--FNYLDQ------KLGGSSGPLPQVIGLTASVGVGD 416 +I DE H S + P MI+ NY+ +L G S + + +GV D Sbjct 1263 IIMDEIHLLASDRGPILEMIVSRMNYISSQTKQPVRLLGMSTAVSNAYDMAGWLGVKD 1320 Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 27/192 (14%) Query 240 PFKPRNYQLELALPAM--KGKNTIICAPTGCGKTFVSLLICEHHLKKFP----------Q 287 P++ N L P +N +ICAPTG GKT ++LL + +K+F Q Sbjct 284 PYETLNQIQSLVYPVAYKTNENMLICAPTGAGKTDIALLTIINTIKQFXXXXXXXXIDIQ 343 Query 288 GQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISG---ATAENVPVEQIVENNDII 344 KV++ A + + FSK +V ++G T + Q +I Sbjct 344 YDDFKVIYVAPLKALAAEIVDKFSKKLAPFNIQVRELTGDMQLTKAEILATQ------VI 397 Query 345 ILTPQI--LVNNLKKGTIPSLSIFTLMIFDECH--NTSKQHPYNMIMFNYLDQKLGGSSG 400 + TP+ +V G +S L+I DE H + + ++ L Q SS Sbjct 398 VTTPEKWDVVTRKANGDNDLVSKVKLLIIDEVHLLHEDRGSVIETLVARTLRQV--ESSQ 455 Query 401 PLPQVIGLTASV 412 + ++IGL+A++ Sbjct 456 SMIRIIGLSATL 467
>6p66_A A DNA repair protein RAD25
Length=471 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 45/163 (28%), Positives = 70/163 (43%), Gaps = 29/163 (18%) Query 568 KDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE 627 +DF V A+G+DE R E L+ E R N K+ L IL E H + Sbjct 300 EDFNKIVMASGYDE-------RAYEALRAWEEARRIAFNSKNKIRKLREIL--ERHRKDK 350 Query 628 TITILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687 I +F + LV + FL P I T R + ++ IL+ F+ Sbjct 351 II--IFTRHNELVYRISK--------VFLIPAI-THRTSREE--------REEILEGFR- 390 Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 +G ++++ V DEGID+ N+ ++ G+ + IQ GR Sbjct 391 TGRFRAIVSSQVLDEGIDVPDANVGVIMSGSGSAREYIQRLGR 433
>8vx9_B B HamB
Length=1174 Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 55/118 (47%), Gaps = 8/118 (7%) Query 259 NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHG 318 + ++ PT GKT ++ L L+ G++ VVF + Q ++ S+ F G Sbjct 324 DLVVSLPTSAGKTRIAELCI---LRCLAGGKR--VVFITPLRALSAQTEATLSRTFGPLG 378 Query 319 YRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPS-LSIFTLMIFDECH 375 ++ + G+ + E + DI++ TP+ L L+ PS ++ L IFDE H Sbjct 379 KTISMLYGSIGVSGMDEDAIRQRDIVVATPEKLDFALRND--PSIINDVGLFIFDEGH 434
>5urk_A A U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1738 Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 106 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 165 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ + II+ TP+ + K G + L+I Sbjct 166 KRLATYGITVAELTGXXXXX---KEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 222 Query 371 FDECH 375 DE H Sbjct 223 LDEIH 227 Score = 37.4 bits (85), Expect = 0.93, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 954 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1008 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1009 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1062 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1063 DEVH------------------LIGGENGPVLEVI 1079
>6p66_C C DNA repair protein RAD25
Length=471 Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust. Identities = 45/163 (28%), Positives = 70/163 (43%), Gaps = 29/163 (18%) Query 568 KDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE 627 +DF V A+G+DE R E L+ E R N K+ L IL E H + Sbjct 300 EDFNKIVMASGYDE-------RAYEALRAWEEARRIAFNSKNKIRKLREIL--ERHRKDK 350 Query 628 TITILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687 I +F + LV + FL P I T R + ++ IL+ F+ Sbjct 351 II--IFTRHNELVYRISK--------VFLIPAI-THRTSREE--------REEILEGFR- 390 Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 +G ++++ V DEGID+ N+ ++ G+ + IQ GR Sbjct 391 TGRFRAIVSSQVLDEGIDVPDANVGVIMSGSGSAREYIQRLGR 433
>2fwr_A A DNA repair protein RAD25
Length=472 Score = 38.5 bits (88), Expect = 0.36, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 70/163 (43%), Gaps = 29/163 (18%) Query 568 KDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE 627 +DF V A+G+DE R E L+ E R N K+ L IL+ + + Sbjct 301 EDFNKIVMASGYDE-------RAYEALRAWEEARRIAFNSKNKIRKLREILER----HRK 349 Query 628 TITILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687 I+F + LV + FL P I T R + ++ IL+ F+ Sbjct 350 DKIIIFTRHNELVYRISK--------VFLIPAI-THRTSREE--------REEILEGFR- 391 Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 +G ++++ V DEGID+ N+ ++ G+ + IQ GR Sbjct 392 TGRFRAIVSSQVLDEGIDVPDANVGVIMSGSGSAREYIQRLGR 434
>8r0a_M B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 38.1 bits (87), Expect = 0.57, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8h6j_M 5D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8h6e_M 5D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>6qx9_RB 5B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>6qw6_S 5B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8qxd_B B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8y6o_E E U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8r08_L B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>6ah0_B D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 38.1 bits (87), Expect = 0.56, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8vxy_D B HamB
Length=1174 Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 55/118 (47%), Gaps = 8/118 (7%) Query 259 NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHG 318 + ++ PT GKT ++ L L+ G++ VVF + Q ++ S+ F G Sbjct 324 DLVVSLPTSAGKTRIAELCI---LRCLAGGKR--VVFITPLRALSAQTEATLSRTFGPLG 378 Query 319 YRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPS-LSIFTLMIFDECH 375 ++ + G+ + E + DI++ TP+ L L+ PS ++ L IFDE H Sbjct 379 KTISMLYGSIGVSGMDEDAIRQRDIVVATPEKLDFALRND--PSIINDVGLFIFDEGH 434
>5yzg_D D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8vxc_B A HamB
Length=1174 Score = 38.5 bits (88), Expect = 0.40, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 55/118 (47%), Gaps = 8/118 (7%) Query 259 NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHG 318 + ++ PT GKT ++ L L+ G++ VVF + Q ++ S+ F G Sbjct 324 DLVVSLPTSAGKTRIAELCI---LRCLAGGKR--VVFITPLRALSAQTEATLSRTFGPLG 378 Query 319 YRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPS-LSIFTLMIFDECH 375 ++ + G+ + E + DI++ TP+ L L+ PS ++ L IFDE H Sbjct 379 KTISMLYGSIGVSGMDEDAIRQRDIVVATPEKLDFALRND--PSIINDVGLFIFDEGH 434
>8vxa_C A HamB
Length=1174 Score = 38.5 bits (88), Expect = 0.40, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 55/118 (47%), Gaps = 8/118 (7%) Query 259 NTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHG 318 + ++ PT GKT ++ L L+ G++ VVF + Q ++ S+ F G Sbjct 324 DLVVSLPTSAGKTRIAELCI---LRCLAGGKR--VVFITPLRALSAQTEATLSRTFGPLG 378 Query 319 YRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPS-LSIFTLMIFDECH 375 ++ + G+ + E + DI++ TP+ L L+ PS ++ L IFDE H Sbjct 379 KTISMLYGSIGVSGMDEDAIRQRDIVVATPEKLDFALRND--PSIINDVGLFIFDEGH 434
>3jcr_C C hBrr2
Length=2136 Score = 38.5 bits (88), Expect = 0.41, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>1gm5_A A RECG
Length=780 Score = 38.5 bits (88), Expect = 0.42, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 45/74 (61%), Gaps = 5/74 (7%) Query 687 ASGDHNILIATSVADEGIDIAQCNLVILY--EYVGNVIKMIQTRGR-GR-ARGSKCFLLT 742 A G ++IL++T+V + GID+ + N++++ E G + ++ Q RGR GR + + CFL+ Sbjct 636 AEGRYDILVSTTVIEVGIDVPRANVMVIENPERFG-LAQLHQLRGRVGRGGQEAYCFLVV 694 Query 743 SNAGVIEKEQINMY 756 + G E++ + Sbjct 695 GDVGEEAMERLRFF 708
>7a5p_NA q U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.42, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>7bdj_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747 Score = 38.5 bits (88), Expect = 0.44, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ + + II+ TP+ + K G + L+I Sbjct 168 KRLATYGITVAELTG---DHQXXXEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224 Query 371 FDECH 375 DE H Sbjct 225 LDEIH 229 Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>7dvq_D D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>5urm_B B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1738 Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 106 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 165 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 166 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 222 Query 371 FDECH 375 DE H Sbjct 223 LDEIH 227 Score = 37.7 bits (86), Expect = 0.74, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 954 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1008 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1009 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1062 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1063 DEVH------------------LIGGENGPVLEVI 1079
>4f93_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1724 Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 96 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 155 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 156 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 212 Query 371 FDECH 375 DE H Sbjct 213 LDEIH 217 Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 944 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 998 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 999 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1052 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1053 DEVH------------------LIGGENGPVLEVI 1069
>4f92_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1724 Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 96 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 155 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 156 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 212 Query 371 FDECH 375 DE H Sbjct 213 LDEIH 217 Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 944 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 998 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 999 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1052 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1053 DEVH------------------LIGGENGPVLEVI 1069
>6s8q_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747 Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224 Query 371 FDECH 375 DE H Sbjct 225 LDEIH 229 Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>8bcc_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747 Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224 Query 371 FDECH 375 DE H Sbjct 225 LDEIH 229 Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>8bcg_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747 Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224 Query 371 FDECH 375 DE H Sbjct 225 LDEIH 229 Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>7bdl_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747 Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224 Query 371 FDECH 375 DE H Sbjct 225 LDEIH 229 Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>7bdi_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747 Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224 Query 371 FDECH 375 DE H Sbjct 225 LDEIH 229 Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>7px3_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747 Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224 Query 371 FDECH 375 DE H Sbjct 225 LDEIH 229 Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>6s8o_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747 Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224 Query 371 FDECH 375 DE H Sbjct 225 LDEIH 229 Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>7os2_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1739 Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 107 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 166 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 167 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 223 Query 371 FDECH 375 DE H Sbjct 224 LDEIH 228 Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 955 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1009 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1010 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1063 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1064 DEVH------------------LIGGENGPVLEVI 1080
>4f91_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1724 Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 96 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 155 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 156 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 212 Query 371 FDECH 375 DE H Sbjct 213 LDEIH 217 Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 944 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 998 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 999 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1052 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1053 DEVH------------------LIGGENGPVLEVI 1069
>8bch_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747 Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224 Query 371 FDECH 375 DE H Sbjct 225 LDEIH 229 Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>8q7x_C B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.4 bits (85), Expect = 0.94, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8c6j_I B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8rc0_G B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.4 bits (85), Expect = 0.94, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8bcb_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747 Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224 Query 371 FDECH 375 DE H Sbjct 225 LDEIH 229 Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>8bce_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747 Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224 Query 371 FDECH 375 DE H Sbjct 225 LDEIH 229 Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>8bc8_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747 Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224 Query 371 FDECH 375 DE H Sbjct 225 LDEIH 229 Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>8bc9_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747 Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224 Query 371 FDECH 375 DE H Sbjct 225 LDEIH 229 Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>6qdv_H B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1722 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 94 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 153 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 154 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 210 Query 371 FDECH 375 DE H Sbjct 211 LDEIH 215 Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 942 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 996 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 997 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1050 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1051 DEVH------------------LIGGENGPVLEVI 1067
>5urm_A A U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1738 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 106 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 165 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 166 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 222 Query 371 FDECH 375 DE H Sbjct 223 LDEIH 227 Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 954 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1008 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1009 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1062 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1063 DEVH------------------LIGGENGPVLEVI 1079
>4kit_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1739 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 107 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 166 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 167 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 223 Query 371 FDECH 375 DE H Sbjct 224 LDEIH 228 Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 955 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1009 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1010 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1063 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1064 DEVH------------------LIGGENGPVLEVI 1080
>8bcd_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224 Query 371 FDECH 375 DE H Sbjct 225 LDEIH 229 Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>8bcf_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224 Query 371 FDECH 375 DE H Sbjct 225 LDEIH 229 Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>8bca_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 167 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224 Query 371 FDECH 375 DE H Sbjct 225 LDEIH 229 Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>5o9z_C C U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8qo9_JA B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8qzs_B B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>6icz_YA D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>6ahd_KB D Brr2, U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>7abi_M s U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>7abg_H s U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8h6k_E 5D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>5z58_D D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>5z57_D D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>5z56_D D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8ch6_JA c U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>7w5b_D D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>5xjc_D D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>6ff7_GB r U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8h6l_E 5D U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>7os1_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1739 Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 107 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 166 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 167 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 223 Query 371 FDECH 375 DE H Sbjct 224 LDEIH 228 Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 955 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1009 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1010 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1063 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1064 DEVH------------------LIGGENGPVLEVI 1080
>6s9i_A B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1747 Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 108 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVCDFKIIYIAPMRSLVQEMVGSFG 167 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 168 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 224 Query 371 FDECH 375 DE H Sbjct 225 LDEIH 229 Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 956 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1010 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1011 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1064 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1065 DEVH------------------LIGGENGPVLEVI 1081
>8r0b_B B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.4 bits (85), Expect = 0.92, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8r09_JA B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.4 bits (85), Expect = 0.92, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>8rm5_JA B U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=2136 Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 497 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 556 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G ++ ++ + II+ TP+ + K G + L+I Sbjct 557 KRLATYGITVAELTG---DHQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 613 Query 371 FDECH 375 DE H Sbjct 614 LDEIH 618 Score = 37.4 bits (85), Expect = 0.92, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 1345 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1399 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1400 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1453 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1454 DEVH------------------LIGGENGPVLEVI 1470
>1fuu_B B YEAST INITIATION FACTOR 4A
Length=438 Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust. Identities = 24/59 (41%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Query 675 LPAQK--CILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRG 731 LP Q+ I+ F+ SG ILI+T + GID+ Q +LVI Y+ N I GRG Sbjct 293 LPQQERDTIMKEFR-SGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRG 350
>5urj_A A U5 small nuclear ribonucleoprotein 200 kDa helicase
Length=1738 Score = 37.7 bits (86), Expect = 0.76, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 51/125 (41%), Gaps = 10/125 (8%) Query 258 KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKG------KVVFFANQIPVYEQQKSVFS 311 +N ++CAPTG GKT V+L+ + K K+++ A + ++ F Sbjct 106 ENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFG 165 Query 312 KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQIL-VNNLKKGTIPSLSIFTLMI 370 K +G V ++G + II+ TP+ + K G + L+I Sbjct 166 KRLATYGITVAELTGXXXXX---XXEISATQIIVCTPEKWDIITRKGGERTYTQLVRLII 222 Query 371 FDECH 375 DE H Sbjct 223 LDEIH 227 Score = 37.4 bits (85), Expect = 0.91, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 36/155 (23%) Query 259 NTIICAPTGCGKTFVSLLICEHH--LKKFPQGQKGKVVFFANQIPVYEQ-QKSVFSKYFE 315 N + APTG GKT IC L+ Q +G+ V+ + EQ + K+ + Sbjct 954 NVFVGAPTGSGKT-----ICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 1008 Query 316 RHGYRVTGISGATAENVPVEQIVENNDIIILTPQ---ILVNNLK-KGTIPSLSIFTLMIF 371 R +V ++G T+ ++ +++ +III TP+ IL K + + ++++F + Sbjct 1009 RLNKKVVLLTGETSTDL---KLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLF---VV 1062 Query 372 DECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVI 406 DE H +GG +GP+ +VI Sbjct 1063 DEVH------------------LIGGENGPVLEVI 1079
>7ase_A f kDDX60
Length=2174 Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust. Identities = 36/140 (26%), Positives = 60/140 (43%), Gaps = 9/140 (6%) Query 241 FKPRNYQLELALPAMKGKNT-IICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299 F P N+Q EL L + G+ + ++CAPT GKTF+S C + K + K VV+ A Sbjct 1023 FNPDNWQREL-LDIVDGRGSAVVCAPTSAGKTFIS-YYCMY--KALRRTNKKVVVYLAPA 1078 Query 300 IPVYEQQKSVFSKYFERHGYRVTG--ISGATAENVPVEQIVENNDIIILTPQILVNNLKK 357 + Q + + Y+ G I GA Q ++ +++ P+ L Sbjct 1079 RALINQAVADVCARYGSKKYKNPGRYIYGALG-GADYHQFHDSCQVLLTVPETFETMLLS 1137 Query 358 GTIPS-LSIFTLMIFDECHN 376 + + +I DE H+ Sbjct 1138 PKYTDWVELIDYVILDEIHS 1157
>7ask_A F kDDX60
Length=2174 Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust. Identities = 36/140 (26%), Positives = 60/140 (43%), Gaps = 9/140 (6%) Query 241 FKPRNYQLELALPAMKGKNT-IICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQ 299 F P N+Q EL L + G+ + ++CAPT GKTF+S C + K + K VV+ A Sbjct 1023 FNPDNWQREL-LDIVDGRGSAVVCAPTSAGKTFIS-YYCMY--KALRRTNKKVVVYLAPA 1078 Query 300 IPVYEQQKSVFSKYFERHGYRVTG--ISGATAENVPVEQIVENNDIIILTPQILVNNLKK 357 + Q + + Y+ G I GA Q ++ +++ P+ L Sbjct 1079 RALINQAVADVCARYGSKKYKNPGRYIYGALG-GADYHQFHDSCQVLLTVPETFETMLLS 1137 Query 358 GTIPS-LSIFTLMIFDECHN 376 + + +I DE H+ Sbjct 1138 PKYTDWVELIDYVILDEIHS 1157
>4d25_A A BMVLG PROTEIN
Length=434 Score = 37.4 bits (85), Expect = 0.79, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 33/59 (56%), Gaps = 8/59 (14%) Query 682 LDAFKASGDHNILIATSVADEGIDIAQCNLVILY-------EYVGNVIKMIQTRGRGRA 733 L FK SG H IL+AT+VA G+DI ++V+ Y EYV + + + RG+A Sbjct 344 LQNFK-SGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKA 401
>4d26_A A BMVLG PROTEIN
Length=434 Score = 37.4 bits (85), Expect = 0.79, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 33/59 (56%), Gaps = 8/59 (14%) Query 682 LDAFKASGDHNILIATSVADEGIDIAQCNLVILY-------EYVGNVIKMIQTRGRGRA 733 L FK SG H IL+AT+VA G+DI ++V+ Y EYV + + + RG+A Sbjct 344 LQNFK-SGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKA 401
>4ovy_A A Haloacid dehalogenase domain protein hydrolase
Length=342 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 23/96 (24%), Positives = 47/96 (49%), Gaps = 7/96 (7%) Query 388 FNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLE 447 N++D + G G + QVIG + VG++ E L+Y+ S A+ + + H+ + Sbjct 207 LNFIDDQAGKPVG-IRQVIGRRPVMAVGNSDGDYEMLEYVT----SGPANGLGLIVHHTD 261 Query 448 ELEQVVYKPQKFFRKVESRISDKFK--YIIAQLMRD 481 + + Y Q F +++ ++D +I+ + RD Sbjct 262 AVREFAYDRQSPFGRLDRALTDATSKGWIVIDMQRD 297
>2fzl_A A DNA repair protein RAD25, XPB
Length=219 Score = 35.8 bits (81), Expect = 1.4, Method: Composition-based stats. Identities = 43/163 (26%), Positives = 70/163 (43%), Gaps = 29/163 (18%) Query 568 KDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPE 627 +DF V A+G+DE R E L+ E R N K+ L IL+ + + Sbjct 66 EDFNKIVMASGYDE-------RAYEALRAWEEARRIAFNSKNKIRKLREILER----HRK 114 Query 628 TITILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKA 687 I+F + LV + FL P I T R + ++ IL+ F+ Sbjct 115 DKIIIFTRHNELVYRISK--------VFLIPAI-THRTSREE--------REEILEGFR- 156 Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 +G ++++ V DEGID+ N+ ++ G+ + IQ GR Sbjct 157 TGRFRAIVSSQVLDEGIDVPDANVGVIMSGSGSAREYIQRLGR 199
>7dni_E A Interferon-induced helicase C domain-containing protein
1 Length=208 Score = 34.7 bits (78), Expect = 3.0, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 73/170 (43%), Gaps = 12/170 (7%) Query 6 RRSLQAFQDYIRKTLDPTYILSYMAPWFREEEV-QYIQAEKNNKGPMEAATLFLKFLLE- 63 R + F+ ++ + +L Y+ F EV + IQ G M+A L L L + Sbjct 12 RYLISCFRARVKMYIQVEPVLDYLT--FLPAEVKEQIQRTVATSGNMQAVELLLSTLEKG 69 Query 64 LQEEGWFRGFLDALDHAG--YSGLYEAIESWDFKKIE---KLEEYRLLLKRLQPEFKTRI 118 + GW R F++AL G + Y E D +EY LL LQP ++ Sbjct 70 VWHLGWTREFVEALRRTGSPLAARYMNPELTDLPSPSFENAHDEYLQLLNLLQPTLVDKL 129 Query 119 IPTDIISD-LSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENW 167 + D++ + E L+ E + G +G +L++ +++ KENW Sbjct 130 LVRDVLDKCMEEELLTIEDRNRIAAAENNGNESGVRELLKRIVQ--KENW 177
>3jcr_F F hPrp28
Length=820 Score = 35.4 bits (80), Expect = 3.2, Method: Compositional matrix adjust. Identities = 55/228 (24%), Positives = 88/228 (39%), Gaps = 31/228 (14%) Query 524 QMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIE 583 Q PD DE K L + S KY ++ + A M A++ L + A + Sbjct 575 QKPDTDEAEDPEKMLANFESGKHKYRQTVMFT--ATMPPAVERLARSYLRRPAVVYIGXX 632 Query 584 QDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDAL 643 +R E+K+ + +E+ K + L IL++ + + I+FV + D L Sbjct 633 XXXXERVEQKVFLM--------SESEKRKKLLAILEQGF----DPPIIIFVNQKKGCDVL 680 Query 644 KNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEG 703 +E G ++ L KA G +IL+AT V Sbjct 681 AKSLEK------------MGYNACTLXXXXXXXXREFALSNLKA-GAKDILVATDVXXXX 727 Query 704 IDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKC---FLLTSNAGV 747 IDI ++V+ Y+ N+ I GR GRA S FL ++ V Sbjct 728 IDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAV 775
>7dni_F B Interferon-induced helicase C domain-containing protein
1 Length=208 Score = 34.7 bits (78), Expect = 3.3, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 73/170 (43%), Gaps = 12/170 (7%) Query 6 RRSLQAFQDYIRKTLDPTYILSYMAPWFREEEV-QYIQAEKNNKGPMEAATLFLKFLLE- 63 R + F+ ++ + +L Y+ F EV + IQ G M+A L L L + Sbjct 12 RYLISCFRARVKMYIQVEPVLDYLT--FLPAEVKEQIQRTVATSGNMQAVELLLSTLEKG 69 Query 64 LQEEGWFRGFLDALDHAG--YSGLYEAIESWDFKKIE---KLEEYRLLLKRLQPEFKTRI 118 + GW R F++AL G + Y E D +EY LL LQP ++ Sbjct 70 VWHLGWTREFVEALRRTGSPLAARYMNPELTDLPSPSFENAHDEYLQLLNLLQPTLVDKL 129 Query 119 IPTDIISD-LSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENW 167 + D++ + E L+ E + G +G +L++ +++ KENW Sbjct 130 LVRDVLDKCMEEELLTIEDRNRIAAAENNGNESGVRELLKRIVQ--KENW 177
>2va8_B B SKI2-TYPE HELICASE
Length=715 Score = 35.4 bits (80), Expect = 3.4, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 9/121 (7%) Query 255 MKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYF 314 ++G ++ +PTG GKT LI E + F GK + + + +K + K + Sbjct 44 LEGNRLLLTSPTGSGKT----LIAEMGIISFLLKNGGKAI-YVTPLRALTNEKYLTFKDW 98 Query 315 ERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDEC 374 E G++V SG + + ++N DIII T + L ++L + L+ + DE Sbjct 99 ELIGFKVAMTSGDYDTD---DAWLKNYDIIITTYEKL-DSLWRHRPEWLNEVNYFVLDEL 154 Query 375 H 375 H Sbjct 155 H 155
>3nej_A A Heat resistant RNA dependent ATPase
Length=207 Score = 34.7 bits (78), Expect = 3.4, Method: Composition-based stats. Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 5/125 (4%) Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308 ALP A++GK+ I A TG GKT +L I E +G+K + + Q S Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLTPXXXXXXQVAS 90 Query 309 VFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFTL 368 + +V + G T E ++ D ++ TP ++ L++G + LS + Sbjct 91 ELTAVAPH--LKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVEV 147 Query 369 MIFDE 373 + DE Sbjct 148 AVLDE 152
>5gju_A A ATP-dependent RNA helicase DeaD
Length=205 Score = 34.7 bits (78), Expect = 3.4, Method: Composition-based stats. Identities = 33/134 (25%), Positives = 60/134 (45%), Gaps = 6/134 (4%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIP 301 KP Q E + G++ + A TG GKT L +L P+ + +++ A Sbjct 23 KPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLD--PELKAPQILVLAPTRE 80 Query 302 VYEQQKSVFSKYFERH--GYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGT 359 + Q + F +H G V + V + + + I++ TP L+++LK+GT Sbjct 81 LAVQVAEAMTD-FSKHMRGVNVVALYXXXXXXVQLRALRQGPQIVVGTPGRLLDHLKRGT 139 Query 360 IPSLSIFTLMIFDE 373 + LS + ++ DE Sbjct 140 L-DLSKLSGLVLDE 152
>2va8_A A SKI2-TYPE HELICASE
Length=715 Score = 35.4 bits (80), Expect = 3.4, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 9/121 (7%) Query 255 MKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYF 314 ++G ++ +PTG GKT LI E + F GK + + + +K + K + Sbjct 44 LEGNRLLLTSPTGSGKT----LIAEMGIISFLLKNGGKAI-YVTPLRALTNEKYLTFKDW 98 Query 315 ERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDEC 374 E G++V SG + + ++N DIII T + L ++L + L+ + DE Sbjct 99 ELIGFKVAMTSGDYDTD---DAWLKNYDIIITTYEKL-DSLWRHRPEWLNEVNYFVLDEL 154 Query 375 H 375 H Sbjct 155 H 155
>2vsx_B B ATP-DEPENDENT RNA HELICASE EIF4A
Length=395 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 23/58 (40%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Query 675 LPAQK--CILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 LP Q+ I+ F+ SG ILI+T + GID+ Q +LVI Y+ N I GR Sbjct 294 LPQQERDTIMKEFR-SGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGR 350
>2vso_B B ATP-DEPENDENT RNA HELICASE EIF4A
Length=395 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 23/58 (40%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Query 675 LPAQK--CILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 LP Q+ I+ F+ SG ILI+T + GID+ Q +LVI Y+ N I GR Sbjct 294 LPQQERDTIMKEFR-SGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGR 350
>2vsx_A A ATP-DEPENDENT RNA HELICASE EIF4A
Length=395 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 23/58 (40%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Query 675 LPAQK--CILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 LP Q+ I+ F+ SG ILI+T + GID+ Q +LVI Y+ N I GR Sbjct 294 LPQQERDTIMKEFR-SGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGR 350
>2vso_A A ATP-DEPENDENT RNA HELICASE EIF4A
Length=395 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 23/58 (40%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Query 675 LPAQK--CILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 LP Q+ I+ F+ SG ILI+T + GID+ Q +LVI Y+ N I GR Sbjct 294 LPQQERDTIMKEFR-SGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGR 350
>2gxs_A A heat resistant RNA dependent ATPase
Length=207 Score = 34.3 bits (77), Expect = 3.7, Method: Composition-based stats. Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%) Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308 ALP A++GK+ I A TG GKT +L I E +G+K + + P E Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87 Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367 V S+ + +V + G T E ++ D ++ TP ++ L++G + LS Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146 Query 368 LMIFDE 373 + + DE Sbjct 147 VAVLDE 152
>2gxu_A A heat resistant RNA dependent ATPase
Length=207 Score = 34.3 bits (77), Expect = 3.7, Method: Composition-based stats. Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%) Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308 ALP A++GK+ I A TG GKT +L I E +G+K + + P E Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87 Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367 V S+ + +V + G T E ++ D ++ TP ++ L++G + LS Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146 Query 368 LMIFDE 373 + + DE Sbjct 147 VAVLDE 152
>2gxs_B B heat resistant RNA dependent ATPase
Length=207 Score = 34.3 bits (77), Expect = 3.7, Method: Composition-based stats. Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%) Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308 ALP A++GK+ I A TG GKT +L I E +G+K + + P E Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87 Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367 V S+ + +V + G T E ++ D ++ TP ++ L++G + LS Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146 Query 368 LMIFDE 373 + + DE Sbjct 147 VAVLDE 152
>2gxq_A A heat resistant RNA dependent ATPase
Length=207 Score = 34.3 bits (77), Expect = 3.7, Method: Composition-based stats. Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%) Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308 ALP A++GK+ I A TG GKT +L I E +G+K + + P E Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87 Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367 V S+ + +V + G T E ++ D ++ TP ++ L++G + LS Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146 Query 368 LMIFDE 373 + + DE Sbjct 147 VAVLDE 152
>7dnj_D D Interferon-induced helicase C domain-containing protein
1 Length=208 Score = 34.3 bits (77), Expect = 3.9, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 73/170 (43%), Gaps = 12/170 (7%) Query 6 RRSLQAFQDYIRKTLDPTYILSYMAPWFREEEV-QYIQAEKNNKGPMEAATLFLKFLLE- 63 R + F+ ++ + +L Y+ F EV + IQ G M+A L L L + Sbjct 12 RYLISCFRARVKMYIQVEPVLDYLT--FLPAEVKEQIQRTVATSGNMQAVELLLSTLEKG 69 Query 64 LQEEGWFRGFLDALDHAG--YSGLYEAIESWDFKKIE---KLEEYRLLLKRLQPEFKTRI 118 + GW R F++AL G + Y E D +EY LL LQP ++ Sbjct 70 VWHLGWTREFVEALRRTGSPLAARYMNPELTDLPSPSFENAHDEYLQLLNLLQPTLVDKL 129 Query 119 IPTDIISD-LSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENW 167 + D++ + E L+ E + G +G +L++ +++ KENW Sbjct 130 LVRDVLDKCMEEELLTIEDRNRIAAAENNGNESGVRELLKRIVQ--KENW 177
>7dnj_C C Interferon-induced helicase C domain-containing protein
1 Length=208 Score = 34.3 bits (77), Expect = 3.9, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 73/170 (43%), Gaps = 12/170 (7%) Query 6 RRSLQAFQDYIRKTLDPTYILSYMAPWFREEEV-QYIQAEKNNKGPMEAATLFLKFLLE- 63 R + F+ ++ + +L Y+ F EV + IQ G M+A L L L + Sbjct 12 RYLISCFRARVKMYIQVEPVLDYLT--FLPAEVKEQIQRTVATSGNMQAVELLLSTLEKG 69 Query 64 LQEEGWFRGFLDALDHAG--YSGLYEAIESWDFKKIE---KLEEYRLLLKRLQPEFKTRI 118 + GW R F++AL G + Y E D +EY LL LQP ++ Sbjct 70 VWHLGWTREFVEALRRTGSPLAARYMNPELTDLPSPSFENAHDEYLQLLNLLQPTLVDKL 129 Query 119 IPTDIISD-LSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENW 167 + D++ + E L+ E + G +G +L++ +++ KENW Sbjct 130 LVRDVLDKCMEEELLTIEDRNRIAAAENNGNESGVRELLKRIVQ--KENW 177
>7dnj_B B Interferon-induced helicase C domain-containing protein
1 Length=208 Score = 34.3 bits (77), Expect = 3.9, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 73/170 (43%), Gaps = 12/170 (7%) Query 6 RRSLQAFQDYIRKTLDPTYILSYMAPWFREEEV-QYIQAEKNNKGPMEAATLFLKFLLE- 63 R + F+ ++ + +L Y+ F EV + IQ G M+A L L L + Sbjct 12 RYLISCFRARVKMYIQVEPVLDYLT--FLPAEVKEQIQRTVATSGNMQAVELLLSTLEKG 69 Query 64 LQEEGWFRGFLDALDHAG--YSGLYEAIESWDFKKIE---KLEEYRLLLKRLQPEFKTRI 118 + GW R F++AL G + Y E D +EY LL LQP ++ Sbjct 70 VWHLGWTREFVEALRRTGSPLAARYMNPELTDLPSPSFENAHDEYLQLLNLLQPTLVDKL 129 Query 119 IPTDIISD-LSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENW 167 + D++ + E L+ E + G +G +L++ +++ KENW Sbjct 130 LVRDVLDKCMEEELLTIEDRNRIAAAENNGNESGVRELLKRIVQ--KENW 177
>7dnj_A A Interferon-induced helicase C domain-containing protein
1 Length=208 Score = 34.3 bits (77), Expect = 3.9, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 73/170 (43%), Gaps = 12/170 (7%) Query 6 RRSLQAFQDYIRKTLDPTYILSYMAPWFREEEV-QYIQAEKNNKGPMEAATLFLKFLLE- 63 R + F+ ++ + +L Y+ F EV + IQ G M+A L L L + Sbjct 12 RYLISCFRARVKMYIQVEPVLDYLT--FLPAEVKEQIQRTVATSGNMQAVELLLSTLEKG 69 Query 64 LQEEGWFRGFLDALDHAG--YSGLYEAIESWDFKKIE---KLEEYRLLLKRLQPEFKTRI 118 + GW R F++AL G + Y E D +EY LL LQP ++ Sbjct 70 VWHLGWTREFVEALRRTGSPLAARYMNPELTDLPSPSFENAHDEYLQLLNLLQPTLVDKL 129 Query 119 IPTDIISD-LSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENW 167 + D++ + E L+ E + G +G +L++ +++ KENW Sbjct 130 LVRDVLDKCMEEELLTIEDRNRIAAAENNGNESGVRELLKRIVQ--KENW 177
>7dni_H D Interferon-induced helicase C domain-containing protein
1 Length=208 Score = 34.3 bits (77), Expect = 3.9, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 73/170 (43%), Gaps = 12/170 (7%) Query 6 RRSLQAFQDYIRKTLDPTYILSYMAPWFREEEV-QYIQAEKNNKGPMEAATLFLKFLLE- 63 R + F+ ++ + +L Y+ F EV + IQ G M+A L L L + Sbjct 12 RYLISCFRARVKMYIQVEPVLDYLT--FLPAEVKEQIQRTVATSGNMQAVELLLSTLEKG 69 Query 64 LQEEGWFRGFLDALDHAG--YSGLYEAIESWDFKKIE---KLEEYRLLLKRLQPEFKTRI 118 + GW R F++AL G + Y E D +EY LL LQP ++ Sbjct 70 VWHLGWTREFVEALRRTGSPLAARYMNPELTDLPSPSFENAHDEYLQLLNLLQPTLVDKL 129 Query 119 IPTDIISD-LSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENW 167 + D++ + E L+ E + G +G +L++ +++ KENW Sbjct 130 LVRDVLDKCMEEELLTIEDRNRIAAAENNGNESGVRELLKRIVQ--KENW 177
>7dni_G C Interferon-induced helicase C domain-containing protein
1 Length=208 Score = 34.3 bits (77), Expect = 3.9, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 73/170 (43%), Gaps = 12/170 (7%) Query 6 RRSLQAFQDYIRKTLDPTYILSYMAPWFREEEV-QYIQAEKNNKGPMEAATLFLKFLLE- 63 R + F+ ++ + +L Y+ F EV + IQ G M+A L L L + Sbjct 12 RYLISCFRARVKMYIQVEPVLDYLT--FLPAEVKEQIQRTVATSGNMQAVELLLSTLEKG 69 Query 64 LQEEGWFRGFLDALDHAG--YSGLYEAIESWDFKKIE---KLEEYRLLLKRLQPEFKTRI 118 + GW R F++AL G + Y E D +EY LL LQP ++ Sbjct 70 VWHLGWTREFVEALRRTGSPLAARYMNPELTDLPSPSFENAHDEYLQLLNLLQPTLVDKL 129 Query 119 IPTDIISD-LSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENW 167 + D++ + E L+ E + G +G +L++ +++ KENW Sbjct 130 LVRDVLDKCMEEELLTIEDRNRIAAAENNGNESGVRELLKRIVQ--KENW 177
>3nbf_B B Heat resistant RNA dependent ATPase
Length=207 Score = 34.3 bits (77), Expect = 4.0, Method: Composition-based stats. Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%) Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308 ALP A++GK+ I A TG GKT +L I E +G+K + + P E Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87 Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367 V S+ + +V + G T E ++ D ++ TP ++ L++G + LS Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146 Query 368 LMIFDE 373 + + DE Sbjct 147 VAVLDE 152
>3nbf_C C Heat resistant RNA dependent ATPase
Length=207 Score = 34.3 bits (77), Expect = 4.0, Method: Composition-based stats. Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%) Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308 ALP A++GK+ I A TG GKT +L I E +G+K + + P E Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87 Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367 V S+ + +V + G T E ++ D ++ TP ++ L++G + LS Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146 Query 368 LMIFDE 373 + + DE Sbjct 147 VAVLDE 152
>3mwj_A A Heat resistant RNA dependent ATPase
Length=207 Score = 34.3 bits (77), Expect = 4.0, Method: Composition-based stats. Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%) Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308 ALP A++GK+ I A TG GKT +L I E +G+K + + P E Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87 Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367 V S+ + +V + G T E ++ D ++ TP ++ L++G + LS Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146 Query 368 LMIFDE 373 + + DE Sbjct 147 VAVLDE 152
>3nbf_A A Heat resistant RNA dependent ATPase
Length=207 Score = 34.3 bits (77), Expect = 4.0, Method: Composition-based stats. Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%) Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308 ALP A++GK+ I A TG GKT +L I E +G+K + + P E Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87 Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367 V S+ + +V + G T E ++ D ++ TP ++ L++G + LS Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146 Query 368 LMIFDE 373 + + DE Sbjct 147 VAVLDE 152
>3mwk_B B Heat resistant RNA dependent ATPase
Length=207 Score = 34.3 bits (77), Expect = 4.0, Method: Composition-based stats. Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%) Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308 ALP A++GK+ I A TG GKT +L I E +G+K + + P E Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87 Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367 V S+ + +V + G T E ++ D ++ TP ++ L++G + LS Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146 Query 368 LMIFDE 373 + + DE Sbjct 147 VAVLDE 152
>3mwl_A A Heat resistant RNA dependent ATPase
Length=207 Score = 34.3 bits (77), Expect = 4.0, Method: Composition-based stats. Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%) Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308 ALP A++GK+ I A TG GKT +L I E +G+K + + P E Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87 Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367 V S+ + +V + G T E ++ D ++ TP ++ L++G + LS Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146 Query 368 LMIFDE 373 + + DE Sbjct 147 VAVLDE 152
>3mwk_A A Heat resistant RNA dependent ATPase
Length=207 Score = 34.3 bits (77), Expect = 4.0, Method: Composition-based stats. Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%) Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308 ALP A++GK+ I A TG GKT +L I E +G+K + + P E Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87 Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367 V S+ + +V + G T E ++ D ++ TP ++ L++G + LS Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146 Query 368 LMIFDE 373 + + DE Sbjct 147 VAVLDE 152
>3mwj_B B Heat resistant RNA dependent ATPase
Length=207 Score = 34.3 bits (77), Expect = 4.0, Method: Composition-based stats. Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%) Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308 ALP A++GK+ I A TG GKT +L I E +G+K + + P E Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87 Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367 V S+ + +V + G T E ++ D ++ TP ++ L++G + LS Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146 Query 368 LMIFDE 373 + + DE Sbjct 147 VAVLDE 152
>3mwl_B B Heat resistant RNA dependent ATPase
Length=207 Score = 34.3 bits (77), Expect = 4.0, Method: Composition-based stats. Identities = 35/126 (28%), Positives = 58/126 (46%), Gaps = 7/126 (6%) Query 251 ALP-AMKGKNTIICAPTGCGKTFV-SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKS 308 ALP A++GK+ I A TG GKT +L I E +G+K + + P E Sbjct 31 ALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLT---PTRELALQ 87 Query 309 VFSKYFERHGY-RVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT 367 V S+ + +V + G T E ++ D ++ TP ++ L++G + LS Sbjct 88 VASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVL-DLSRVE 146 Query 368 LMIFDE 373 + + DE Sbjct 147 VAVLDE 152
>8r08_GA G Probable ATP-dependent RNA helicase DDX23
Length=820 Score = 35.0 bits (79), Expect = 4.3, Method: Compositional matrix adjust. Identities = 55/228 (24%), Positives = 88/228 (39%), Gaps = 31/228 (14%) Query 524 QMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIE 583 Q PD DE K L + S KY ++ + A M A++ L + A + Sbjct 575 QKPDTDEAEXPEKMLANFESGKHKYRQTVMFT--ATMPPAVERLARSYLRRPAVVYIXXX 632 Query 584 QDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDAL 643 +R E+K+ + +E+ K + L IL++ + + I+FV + D L Sbjct 633 GKPHERVEQKVFLM--------SESEKRKKLLAILEQGF----DPPIIIFVNQKKGCDVL 680 Query 644 KNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEG 703 +E G ++ L KA G +IL+AT V Sbjct 681 AKSLEK------------MGYNACTLXXXXXXXXREFALSNLKA-GAKDILVATDVXXXX 727 Query 704 IDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKC---FLLTSNAGV 747 IDI ++V+ Y+ N+ I GR GRA S FL ++ V Sbjct 728 IDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAV 775
>5tnu_A A DNA-dependent ATPase XPBII
Length=459 Score = 35.0 bits (79), Expect = 4.4, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 IL F+ G++ +++A++V DEG+D+ L I+ G + +Q GR Sbjct 381 ILQKFR-DGEYRVIVASTVFDEGVDVPDATLAIVMGGYGTKRQFLQRLGR 429 Score = 35.0 bits (79), Expect = 4.5, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVY 303 R+YQ E +K K II PTG GKT V+L I K + I + Sbjct 90 RDYQAEAVKAWLKEKRGIIVLPTGAGKTQVALKIVSI--------MKVATLIVVPTIDLI 141 Query 304 EQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSL 363 Q K +KY + GI G +++ ++ D + L N Sbjct 142 TQWKERINKYLDFD----PGIIGGGEDSLKGITVI-TYDSAYTRAEELGNK--------- 187 Query 364 SIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGP 401 F L+IFDE H+ + M +LG ++ P Sbjct 188 --FPLLIFDEVHHLPSEGYSIMAQLFASPYRLGLTATP 223
>6p4o_C C DNA-dependent ATPase XPBII
Length=459 Score = 35.0 bits (79), Expect = 4.4, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 IL F+ G++ +++A++V DEG+D+ L I+ G + +Q GR Sbjct 381 ILQKFR-DGEYRVIVASTVFDEGVDVPDATLAIVMGGYGTKRQFLQRLGR 429 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVY 303 R+YQ E +K K II PTG GKT V+L I K + I + Sbjct 90 RDYQAEAVKAWLKEKRGIIVLPTGAGKTQVALKIVSI--------MKVATLIVVPTIDLI 141 Query 304 EQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSL 363 Q K +KY + GI G +++ ++ D + L N Sbjct 142 TQWKERINKYLDFD----PGIIGGGEDSLKGITVI-TYDSAYTRAEELGNK--------- 187 Query 364 SIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGP 401 F L+IFDE H+ + M +LG ++ P Sbjct 188 --FPLLIFDEVHHLPSEGYSIMAQLFASPYRLGLTATP 223
>6p4o_A A DNA-dependent ATPase XPBII
Length=459 Score = 35.0 bits (79), Expect = 4.4, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 IL F+ G++ +++A++V DEG+D+ L I+ G + +Q GR Sbjct 381 ILQKFR-DGEYRVIVASTVFDEGVDVPDATLAIVMGGYGTKRQFLQRLGR 429 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVY 303 R+YQ E +K K II PTG GKT V+L I K + I + Sbjct 90 RDYQAEAVKAWLKEKRGIIVLPTGAGKTQVALKIVSI--------MKVATLIVVPTIDLI 141 Query 304 EQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSL 363 Q K +KY + GI G +++ ++ D + L N Sbjct 142 TQWKERINKYLDFD----PGIIGGGEDSLKGITVI-TYDSAYTRAEELGNK--------- 187 Query 364 SIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGP 401 F L+IFDE H+ + M +LG ++ P Sbjct 188 --FPLLIFDEVHHLPSEGYSIMAQLFASPYRLGLTATP 223
>6p4o_E E DNA-dependent ATPase XPBII
Length=459 Score = 35.0 bits (79), Expect = 4.6, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 IL F+ G++ +++A++V DEG+D+ L I+ G + +Q GR Sbjct 381 ILQKFR-DGEYRVIVASTVFDEGVDVPDATLAIVMGGYGTKRQFLQRLGR 429 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVY 303 R+YQ E +K K II PTG GKT V+L I K + I + Sbjct 90 RDYQAEAVKAWLKEKRGIIVLPTGAGKTQVALKIVSI--------MKVATLIVVPTIDLI 141 Query 304 EQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSL 363 Q K +KY + GI G +++ ++ D + L N Sbjct 142 TQWKERINKYLDFD----PGIIGGGEDSLKGITVI-TYDSAYTRAEELGNK--------- 187 Query 364 SIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGP 401 F L+IFDE H+ + M +LG ++ P Sbjct 188 --FPLLIFDEVHHLPSEGYSIMAQLFASPYRLGLTATP 223
>6p4f_C C DNA-dependent ATPase XPBII
Length=440 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 IL F+ G++ +++A++V DEG+D+ L I+ G + +Q GR Sbjct 362 ILQKFR-DGEYRVIVASTVFDEGVDVPDATLAIVMGGYGTKRQFLQRLGR 410 Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVY 303 R+YQ E +K K II PTG GKT V+L I K + I + Sbjct 71 RDYQAEAVKAWLKEKRGIIVLPTGAGKTQVALKIVSI--------MKVATLIVVPTIDLI 122 Query 304 EQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSL 363 Q K +KY + GI G +++ ++ D + L N Sbjct 123 TQWKERINKYLDFD----PGIIGGGEDSLKGITVI-TYDSAYTRAEELGNK--------- 168 Query 364 SIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGP 401 F L+IFDE H+ + M +LG ++ P Sbjct 169 --FPLLIFDEVHHLPSEGYSIMAQLFASPYRLGLTATP 204
>8dpe_A A ATP-dependent RNA helicase DDX42
Length=444 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 54/222 (24%), Positives = 85/222 (38%), Gaps = 33/222 (15%) Query 529 DEESRICKALFLY-----TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIE 583 DE R+ F Y SH+R L+ S R K ++ ++ ++ Sbjct 205 DEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKK-----IEKLARDILIDPIRVVQ 259 Query 584 QDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDAL 643 D+ + E+ Q +E + PS N ++ + +LFV +A + L Sbjct 260 GDIGEAXEDVTQIVEILHSGPSKWN-------WLTRRLVEFTSSGSVLLFVTKKANAEEL 312 Query 644 KNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEG 703 N N K G+L G M + ++ FK D +L+AT VA G Sbjct 313 AN----NLKQEGHNLGLLHG--------DMDQSERNKVISDFKKK-DIPVLVATDVAARG 359 Query 704 IDIAQCNLVILYEYVGNVIKMIQTRGR-GRA--RGSKCFLLT 742 +DI VI Y+ ++ GR GRA +G LLT Sbjct 360 LDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLT 401 Score = 33.9 bits (76), Expect = 9.6, Method: Compositional matrix adjust. Identities = 31/136 (23%), Positives = 61/136 (45%), Gaps = 4/136 (3%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKT--FV-SLLICEHHLKKFPQGQKGKVVFFAN 298 +P Q + A+ G++ I A TG GKT F+ +LI K+ G V Sbjct 73 QPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCP 132 Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358 + +Q + ++ + + R + G + + + E +I++ TP L++++KK Sbjct 133 TRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKK 192 Query 359 TIPSLSIFTLMIFDEC 374 +L + ++FDE Sbjct 193 AT-NLQRVSYLVFDEA 207
>6p4w_C C DNA-dependent ATPase XPBII
Length=440 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 IL F+ G++ +++A++V DEG+D+ L I+ G + +Q GR Sbjct 362 ILQKFR-DGEYRVIVASTVFDEGVDVPDATLAIVMGGYGTKRQFLQRLGR 410 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVY 303 R+YQ E +K K II PTG GKT V+L I K + I + Sbjct 71 RDYQAEAVKAWLKEKRGIIVLPTGAGKTQVALKIVSI--------MKVATLIVVPTIDLI 122 Query 304 EQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSL 363 Q K +KY + GI G +++ ++ D + L N Sbjct 123 TQWKERINKYLDFD----PGIIGGGEDSLKGITVI-TYDSAYTRAEELGNK--------- 168 Query 364 SIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGP 401 F L+IFDE H+ + M +LG ++ P Sbjct 169 --FPLLIFDEVHHLPSEGYSIMAQLFASPYRLGLTATP 204
>6p4f_A A DNA-dependent ATPase XPBII
Length=440 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 IL F+ G++ +++A++V DEG+D+ L I+ G + +Q GR Sbjct 362 ILQKFR-DGEYRVIVASTVFDEGVDVPDATLAIVMGGYGTKRQFLQRLGR 410 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVY 303 R+YQ E +K K II PTG GKT V+L I K + I + Sbjct 71 RDYQAEAVKAWLKEKRGIIVLPTGAGKTQVALKIVSI--------MKVATLIVVPTIDLI 122 Query 304 EQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSL 363 Q K +KY + GI G +++ ++ D + L N Sbjct 123 TQWKERINKYLDFD----PGIIGGGEDSLKGITVI-TYDSAYTRAEELGNK--------- 168 Query 364 SIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGP 401 F L+IFDE H+ + M +LG ++ P Sbjct 169 --FPLLIFDEVHHLPSEGYSIMAQLFASPYRLGLTATP 204
>6p4w_A A DNA-dependent ATPase XPBII
Length=440 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 IL F+ G++ +++A++V DEG+D+ L I+ G + +Q GR Sbjct 362 ILQKFR-DGEYRVIVASTVFDEGVDVPDATLAIVMGGYGTKRQFLQRLGR 410 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVY 303 R+YQ E +K K II PTG GKT V+L I K + I + Sbjct 71 RDYQAEAVKAWLKEKRGIIVLPTGAGKTQVALKIVSI--------MKVATLIVVPTIDLI 122 Query 304 EQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSL 363 Q K +KY + GI G +++ ++ D + L N Sbjct 123 TQWKERINKYLDFD----PGIIGGGEDSLKGITVI-TYDSAYTRAEELGNK--------- 168 Query 364 SIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGP 401 F L+IFDE H+ + M +LG ++ P Sbjct 169 --FPLLIFDEVHHLPSEGYSIMAQLFASPYRLGLTATP 204
>8q7w_F E Probable ATP-dependent RNA helicase DDX23
Length=820 Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust. Identities = 55/228 (24%), Positives = 88/228 (39%), Gaps = 31/228 (14%) Query 524 QMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIE 583 Q PD DE K L + S KY ++ + A M A++ L + A + Sbjct 575 QKPDTDEAEDPEKMLANFESGKHKYRQTVMFT--ATMPPAVERLARSYLRRPAVVYIGXX 632 Query 584 QDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDAL 643 +R E+K+ + +E+ K + L IL++ + + I+FV + D L Sbjct 633 XXPHERVEQKVFLM--------SESEKRKKLLAILEQGF----DPPIIIFVNQKKGCDVL 680 Query 644 KNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEG 703 +E G ++ L KA G +IL+AT V Sbjct 681 AKSLEK------------MGYNACTLXXXXXXXXREFALSNLKA-GAKDILVATDVXXXX 727 Query 704 IDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKC---FLLTSNAGV 747 IDI ++V+ Y+ N+ I GR GRA S FL ++ V Sbjct 728 IDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAV 775
>2iwh_B B ELONGATION FACTOR 3A
Length=986 Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust. Identities = 16/54 (30%), Positives = 24/54 (44%), Gaps = 0/54 (0%) Query 262 ICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFE 315 IC P GCGK+ + I + FP ++ + V+ + I SV FE Sbjct 466 ICGPNGCGKSTLMRAIANGQVDGFPTQEECRTVYVEHDIDGTHSDTSVLDFVFE 519
>7b7d_DC EF Elongation factor 3A
Length=1064 Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust. Identities = 16/54 (30%), Positives = 24/54 (44%), Gaps = 0/54 (0%) Query 262 ICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFE 315 IC P GCGK+ + I + FP ++ + V+ + I SV FE Sbjct 461 ICGPNGCGKSTLMRAIANGQVDGFPTQEECRTVYVEHDIDGTHSDTSVLDFVFE 514
>5tnu_B B DNA-dependent ATPase XPBII
Length=459 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 IL F+ G++ +++A++V DEG+D+ L I+ G + +Q GR Sbjct 381 ILQKFR-DGEYRVIVASTVFDEGVDVPDATLAIVMGGYGTKRQFLQRLGR 429 Score = 34.7 bits (78), Expect = 5.4, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVY 303 R+YQ E +K K II PTG GKT V+L I K + I + Sbjct 90 RDYQAEAVKAWLKEKRGIIVLPTGAGKTQVALKIVSI--------MKVATLIVVPTIDLI 141 Query 304 EQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSL 363 Q K +KY + GI G +++ ++ D + L N Sbjct 142 TQWKERINKYLDFD----PGIIGGGEDSLKGITVI-TYDSAYTRAEELGNK--------- 187 Query 364 SIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGP 401 F L+IFDE H+ + M +LG ++ P Sbjct 188 --FPLLIFDEVHHLPSEGYSIMAQLFASPYRLGLTATP 223
>2iw3_B B ELONGATION FACTOR 3A
Length=1074 Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust. Identities = 16/54 (30%), Positives = 24/54 (44%), Gaps = 0/54 (0%) Query 262 ICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFE 315 IC P GCGK+ + I + FP ++ + V+ + I SV FE Sbjct 466 ICGPNGCGKSTLMRAIANGQVDGFPTQEECRTVYVEHDIDGTHSDTSVLDFVFE 519
>2ix3_B B ELONGATION FACTOR 3
Length=986 Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust. Identities = 16/54 (30%), Positives = 24/54 (44%), Gaps = 0/54 (0%) Query 262 ICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFE 315 IC P GCGK+ + I + FP ++ + V+ + I SV FE Sbjct 466 ICGPNGCGKSTLMRAIANGQVDGFPTQEECRTVYVEHDIDGTHSDTSVLDFVFE 519
>2ix3_A A ELONGATION FACTOR 3
Length=986 Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust. Identities = 16/54 (30%), Positives = 24/54 (44%), Gaps = 0/54 (0%) Query 262 ICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFE 315 IC P GCGK+ + I + FP ++ + V+ + I SV FE Sbjct 466 ICGPNGCGKSTLMRAIANGQVDGFPTQEECRTVYVEHDIDGTHSDTSVLDFVFE 519
>2iwh_A A ELONGATION FACTOR 3A
Length=986 Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust. Identities = 16/54 (30%), Positives = 24/54 (44%), Gaps = 0/54 (0%) Query 262 ICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFE 315 IC P GCGK+ + I + FP ++ + V+ + I SV FE Sbjct 466 ICGPNGCGKSTLMRAIANGQVDGFPTQEECRTVYVEHDIDGTHSDTSVLDFVFE 519
>2ix8_A A ELONGATION FACTOR 3A
Length=1064 Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust. Identities = 16/54 (30%), Positives = 24/54 (44%), Gaps = 0/54 (0%) Query 262 ICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFE 315 IC P GCGK+ + I + FP ++ + V+ + I SV FE Sbjct 460 ICGPNGCGKSTLMRAIANGQVDGFPTQEECRTVYVEHDIDGTHSDTSVLDFVFE 513
>2iw3_A A ELONGATION FACTOR 3A
Length=1074 Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust. Identities = 16/54 (30%), Positives = 24/54 (44%), Gaps = 0/54 (0%) Query 262 ICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFE 315 IC P GCGK+ + I + FP ++ + V+ + I SV FE Sbjct 466 ICGPNGCGKSTLMRAIANGQVDGFPTQEECRTVYVEHDIDGTHSDTSVLDFVFE 519
>6uv0_A A Probable ATP-dependent RNA helicase DDX17
Length=448 Score = 34.7 bits (78), Expect = 5.9, Method: Compositional matrix adjust. Identities = 32/115 (28%), Positives = 48/115 (42%), Gaps = 17/115 (15%) Query 618 LQEEYHLNPETITILFVKTRALVDALKNWI--EGNPKLSFLKPGILTGRGKTNQNTGMTL 675 L EE TI+FV+T+ D L + +G P + G +Q Sbjct 301 LMEEIMXXXXXKTIIFVETKRRCDDLTRRMRRDGWPAMCI--------HGDKSQ------ 346 Query 676 PAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 P + +L+ F+ SG ILIAT G+D+ VI Y+Y + + GR Sbjct 347 PERDWVLNEFR-SGKAPILIATDXXXXGLDVEDVKFVINYDYPNSSEDYVHRIGR 400
>8q7x_F E Probable ATP-dependent RNA helicase DDX23
Length=820 Score = 34.7 bits (78), Expect = 6.0, Method: Compositional matrix adjust. Identities = 55/228 (24%), Positives = 88/228 (39%), Gaps = 31/228 (14%) Query 524 QMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIE 583 Q PD DE K L + S KY ++ + A M A++ L + A + Sbjct 575 QKPDTDEAEDPEKMLANFESGKHKYRQTVMFT--ATMPPAVERLARSYLRRPAVVYIGXX 632 Query 584 QDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDAL 643 +R E+K+ + +E+ K + L IL++ + + I+FV + D L Sbjct 633 XXPHERVEQKVFLM--------SESEKRKKLLAILEQGF----DPPIIIFVNQKKGCDVL 680 Query 644 KNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEG 703 +E G ++ L KA G +IL+AT V Sbjct 681 AKSLEK------------MGYNACTLXXXXXXXXREFALSNLKA-GAKDILVATDVXXXX 727 Query 704 IDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKC---FLLTSNAGV 747 IDI ++V+ Y+ N+ I GR GRA S FL ++ V Sbjct 728 IDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAV 775
>8h6j_FA 4U Probable ATP-dependent RNA helicase DDX23
Length=820 Score = 34.7 bits (78), Expect = 6.0, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKC---FLLTS 743 +G +IL+AT V IDI ++V+ Y+ N+ I GR GRA S FL Sbjct 712 AGAKDILVATDVXXXXIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKE 771 Query 744 NAGV 747 ++ V Sbjct 772 DSAV 775
>6qw6_X 5X Probable ATP-dependent RNA helicase DDX23
Length=820 Score = 34.7 bits (78), Expect = 6.3, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKC---FLLTS 743 +G +IL+AT V IDI ++V+ Y+ N+ I GR GRA S FL Sbjct 712 AGAKDILVATDVXXXXIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKE 771 Query 744 NAGV 747 ++ V Sbjct 772 DSAV 775
>6qx9_AA 5X Probable ATP-dependent RNA helicase DDX23
Length=820 Score = 34.7 bits (78), Expect = 6.3, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKC---FLLTS 743 +G +IL+AT V IDI ++V+ Y+ N+ I GR GRA S FL Sbjct 712 AGAKDILVATDVXXXXIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKE 771 Query 744 NAGV 747 ++ V Sbjct 772 DSAV 775
>8i9y_G CE RNA helicase
Length=598 Score = 34.3 bits (77), Expect = 6.8, Method: Compositional matrix adjust. Identities = 26/110 (24%), Positives = 46/110 (42%), Gaps = 10/110 (9%) Query 253 PAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF---PQGQKGKVVFFANQIPVYEQQKSV 309 PA+ GK+ + A TG GKT L+ L P+ G +V P E + Sbjct 144 PALAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLRFKPRNGTGAIVV----TPTRELALQI 199 Query 310 FS---KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356 F + + H + G E++ + +++I TP L+++L+ Sbjct 200 FGVARELMKYHSQTYGVVIGGANRRAEAEKLGKGVNLLIATPGRLLDHLQ 249
>8i9x_G CE RNA helicase
Length=598 Score = 34.3 bits (77), Expect = 6.8, Method: Compositional matrix adjust. Identities = 26/110 (24%), Positives = 46/110 (42%), Gaps = 10/110 (9%) Query 253 PAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF---PQGQKGKVVFFANQIPVYEQQKSV 309 PA+ GK+ + A TG GKT L+ L P+ G +V P E + Sbjct 144 PALAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLRFKPRNGTGAIVV----TPTRELALQI 199 Query 310 FS---KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356 F + + H + G E++ + +++I TP L+++L+ Sbjct 200 FGVARELMKYHSQTYGVVIGGANRRAEAEKLGKGVNLLIATPGRLLDHLQ 249
>8rc0_E D Probable ATP-dependent RNA helicase DDX23
Length=820 Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKC---FLLTS 743 +G +IL+AT V IDI ++V+ Y+ N+ I GR GRA S FL Sbjct 712 AGAKDILVATDVXXXXIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKE 771 Query 744 NAGV 747 ++ V Sbjct 772 DSAV 775
>6yvh_H K Eukaryotic initiation factor 4A-III
Length=166 Score = 33.1 bits (74), Expect = 6.9, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 31/60 (52%), Gaps = 1/60 (2%) Query 678 QKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSK 737 ++ I+ F+ SG +LI+T V G+D+ Q +L+I Y+ N I GR G K Sbjct 71 RESIMKEFR-SGASRVLISTDVWXXGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRK 129
>8i9z_G CE RNA helicase
Length=598 Score = 34.3 bits (77), Expect = 7.1, Method: Compositional matrix adjust. Identities = 26/110 (24%), Positives = 46/110 (42%), Gaps = 10/110 (9%) Query 253 PAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF---PQGQKGKVVFFANQIPVYEQQKSV 309 PA+ GK+ + A TG GKT L+ L P+ G +V P E + Sbjct 144 PALAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLRFKPRNGTGAIVV----TPTRELALQI 199 Query 310 FS---KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356 F + + H + G E++ + +++I TP L+++L+ Sbjct 200 FGVARELMKYHSQTYGVVIGGANRRAEAEKLGKGVNLLIATPGRLLDHLQ 249
>8i9p_F CE RNA helicase
Length=598 Score = 34.3 bits (77), Expect = 7.1, Method: Compositional matrix adjust. Identities = 26/110 (24%), Positives = 46/110 (42%), Gaps = 10/110 (9%) Query 253 PAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF---PQGQKGKVVFFANQIPVYEQQKSV 309 PA+ GK+ + A TG GKT L+ L P+ G +V P E + Sbjct 144 PALAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLRFKPRNGTGAIVV----TPTRELALQI 199 Query 310 FS---KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356 F + + H + G E++ + +++I TP L+++L+ Sbjct 200 FGVARELMKYHSQTYGVVIGGANRRAEAEKLGKGVNLLIATPGRLLDHLQ 249
>8i9t_G CE RNA helicase
Length=598 Score = 34.3 bits (77), Expect = 7.1, Method: Compositional matrix adjust. Identities = 26/110 (24%), Positives = 46/110 (42%), Gaps = 10/110 (9%) Query 253 PAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF---PQGQKGKVVFFANQIPVYEQQKSV 309 PA+ GK+ + A TG GKT L+ L P+ G +V P E + Sbjct 144 PALAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLRFKPRNGTGAIVV----TPTRELALQI 199 Query 310 FS---KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356 F + + H + G E++ + +++I TP L+++L+ Sbjct 200 FGVARELMKYHSQTYGVVIGGANRRAEAEKLGKGVNLLIATPGRLLDHLQ 249
>8ia0_G CE RNA helicase
Length=598 Score = 34.3 bits (77), Expect = 7.1, Method: Compositional matrix adjust. Identities = 26/110 (24%), Positives = 46/110 (42%), Gaps = 10/110 (9%) Query 253 PAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF---PQGQKGKVVFFANQIPVYEQQKSV 309 PA+ GK+ + A TG GKT L+ L P+ G +V P E + Sbjct 144 PALAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLRFKPRNGTGAIVV----TPTRELALQI 199 Query 310 FS---KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356 F + + H + G E++ + +++I TP L+++L+ Sbjct 200 FGVARELMKYHSQTYGVVIGGANRRAEAEKLGKGVNLLIATPGRLLDHLQ 249
>8i9w_F CE RNA helicase
Length=598 Score = 34.3 bits (77), Expect = 7.1, Method: Compositional matrix adjust. Identities = 26/110 (24%), Positives = 46/110 (42%), Gaps = 10/110 (9%) Query 253 PAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF---PQGQKGKVVFFANQIPVYEQQKSV 309 PA+ GK+ + A TG GKT L+ L P+ G +V P E + Sbjct 144 PALAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLRFKPRNGTGAIVV----TPTRELALQI 199 Query 310 FS---KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356 F + + H + G E++ + +++I TP L+++L+ Sbjct 200 FGVARELMKYHSQTYGVVIGGANRRAEAEKLGKGVNLLIATPGRLLDHLQ 249
>8i9r_F CE RNA helicase
Length=598 Score = 34.3 bits (77), Expect = 7.1, Method: Compositional matrix adjust. Identities = 26/110 (24%), Positives = 46/110 (42%), Gaps = 10/110 (9%) Query 253 PAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF---PQGQKGKVVFFANQIPVYEQQKSV 309 PA+ GK+ + A TG GKT L+ L P+ G +V P E + Sbjct 144 PALAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLRFKPRNGTGAIVV----TPTRELALQI 199 Query 310 FS---KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356 F + + H + G E++ + +++I TP L+++L+ Sbjct 200 FGVARELMKYHSQTYGVVIGGANRRAEAEKLGKGVNLLIATPGRLLDHLQ 249
>8i9v_G CE RNA helicase
Length=598 Score = 34.3 bits (77), Expect = 7.1, Method: Compositional matrix adjust. Identities = 26/110 (24%), Positives = 46/110 (42%), Gaps = 10/110 (9%) Query 253 PAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF---PQGQKGKVVFFANQIPVYEQQKSV 309 PA+ GK+ + A TG GKT L+ L P+ G +V P E + Sbjct 144 PALAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLRFKPRNGTGAIVV----TPTRELALQI 199 Query 310 FS---KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLK 356 F + + H + G E++ + +++I TP L+++L+ Sbjct 200 FGVARELMKYHSQTYGVVIGGANRRAEAEKLGKGVNLLIATPGRLLDHLQ 249
>8qxd_V G Probable ATP-dependent RNA helicase DDX23
Length=820 Score = 34.3 bits (77), Expect = 7.2, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Query 688 SGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKC---FLLTS 743 +G +IL+AT V IDI ++V+ Y+ N+ I GR GRA S FL Sbjct 712 AGAKDILVATDVXXXXIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKE 771 Query 744 NAGV 747 ++ V Sbjct 772 DSAV 775
>7evn_E E ATP-dependent RNA helicase DDX42
Length=958 Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust. Identities = 31/136 (23%), Positives = 61/136 (45%), Gaps = 4/136 (3%) Query 242 KPRNYQLELALPAMKGKNTIICAPTGCGKT--FV-SLLICEHHLKKFPQGQKGKVVFFAN 298 +P Q + A+ G++ I A TG GKT F+ +LI K+ G V Sbjct 295 QPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCP 354 Query 299 QIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKG 358 + +Q + ++ + + R + G + + + E +I++ TP L++++KK Sbjct 355 TRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKK 414 Query 359 TIPSLSIFTLMIFDEC 374 +L + ++FDE Sbjct 415 AT-NLQRVSYLVFDEA 429
>8bic_A A methyltransferase Plu4891
Length=335 Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust. Identities = 31/121 (26%), Positives = 49/121 (40%), Gaps = 8/121 (7%) Query 536 KALFLYTSH---LRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEE 592 K F Y H R D+ + ++ + L + DF + R E +L R E Sbjct 141 KPFFEYLDHHELFRSNFDSFMSKNSDKIIEKLLDIYDFSQHNRILDVGGGEGNLLIRINE 200 Query 593 KLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPK 652 K++ D NE P LED+ FI + + L P + +K + + NW + N Sbjct 201 KIKGKHYAVLDRYNETPVLEDIEFINGDFFKLVPSGYDLYILK-----NVIHNWSDSNAI 255 Query 653 L 653 L Sbjct 256 L 256
>7pru_B B Putative iron-sulfur protein
Length=700 Score = 34.3 bits (77), Expect = 7.3, Method: Compositional matrix adjust. Identities = 22/80 (28%), Positives = 35/80 (44%), Gaps = 4/80 (5%) Query 199 DLEDKMETSDIQIFYQEDPECQNLSENSCPPSEVSDTNL-YSPFKPRNYQLELALPAMKG 257 D+E + + + +E P + L+ + Y P +P L L +PA G Sbjct 410 DMETLFDLQKVNVTIREAPNAKPLALPKGGEIRFENVTFGYYPDRPILRNLSLTIPA--G 467 Query 258 KNTIICAPTGCGK-TFVSLL 276 K + P+GCGK T + LL Sbjct 468 KKVAVVGPSGCGKSTLLRLL 487
>7pru_A A Putative iron-sulfur protein
Length=700 Score = 34.3 bits (77), Expect = 7.3, Method: Compositional matrix adjust. Identities = 22/80 (28%), Positives = 35/80 (44%), Gaps = 4/80 (5%) Query 199 DLEDKMETSDIQIFYQEDPECQNLSENSCPPSEVSDTNL-YSPFKPRNYQLELALPAMKG 257 D+E + + + +E P + L+ + Y P +P L L +PA G Sbjct 410 DMETLFDLQKVNVTIREAPNAKPLALPKGGEIRFENVTFGYYPDRPILRNLSLTIPA--G 467 Query 258 KNTIICAPTGCGK-TFVSLL 276 K + P+GCGK T + LL Sbjct 468 KKVAVVGPSGCGKSTLLRLL 487
>2hjv_A A ATP-dependent RNA helicase dbpA
Length=163 Score = 33.1 bits (74), Expect = 7.7, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (2%) Query 672 GMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRG 731 GM + +++ FK G++ L+AT VA GIDI +LVI Y+ + GR Sbjct 68 GMIQEDRFDVMNEFK-RGEYRYLVATDVAARGIDIENISLVINYDLPLEKESYVHRTGRT 126 Query 732 RARGSK 737 G+K Sbjct 127 GRAGNK 132
>2fwr_B B DNA repair protein RAD25
Length=472 Score = 34.3 bits (77), Expect = 7.7, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 IL+ F+ +G ++++ V DEGID+ N+ ++ G+ + IQ GR Sbjct 386 ILEGFR-TGRFRAIVSSQVLDEGIDVPDANVGVIMSGSGSAREYIQRLGR 434
>7pqx_B B Putative iron-sulfur protein
Length=700 Score = 34.3 bits (77), Expect = 7.8, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 39/83 (47%), Gaps = 10/83 (12%) Query 199 DLEDKMETSDIQIFYQEDPECQNLSENSCP-PSEVSDTNL---YSPFKPRNYQLELALPA 254 D+E + + + +E P + L+ P E+ N+ Y P +P L L +PA Sbjct 410 DMETLFDLQKVNVTIREAPNAKPLA---LPKGGEIRFENVTFGYYPDRPILRNLSLTIPA 466 Query 255 MKGKNTIICAPTGCGK-TFVSLL 276 GK + P+GCGK T + LL Sbjct 467 --GKKVAVVGPSGCGKSTLLRLL 487
>7psd_A B Putative iron-sulfur protein
Length=700 Score = 34.3 bits (77), Expect = 7.8, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 39/83 (47%), Gaps = 10/83 (12%) Query 199 DLEDKMETSDIQIFYQEDPECQNLSENSCP-PSEVSDTNL---YSPFKPRNYQLELALPA 254 D+E + + + +E P + L+ P E+ N+ Y P +P L L +PA Sbjct 410 DMETLFDLQKVNVTIREAPNAKPLA---LPKGGEIRFENVTFGYYPDRPILRNLSLTIPA 466 Query 255 MKGKNTIICAPTGCGK-TFVSLL 276 GK + P+GCGK T + LL Sbjct 467 --GKKVAVVGPSGCGKSTLLRLL 487
>7pro_B B Putative iron-sulfur protein
Length=700 Score = 34.3 bits (77), Expect = 7.8, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 39/83 (47%), Gaps = 10/83 (12%) Query 199 DLEDKMETSDIQIFYQEDPECQNLSENSCP-PSEVSDTNL---YSPFKPRNYQLELALPA 254 D+E + + + +E P + L+ P E+ N+ Y P +P L L +PA Sbjct 410 DMETLFDLQKVNVTIREAPNAKPLA---LPKGGEIRFENVTFGYYPDRPILRNLSLTIPA 466 Query 255 MKGKNTIICAPTGCGK-TFVSLL 276 GK + P+GCGK T + LL Sbjct 467 --GKKVAVVGPSGCGKSTLLRLL 487
>7pro_A A Putative iron-sulfur protein
Length=700 Score = 34.3 bits (77), Expect = 7.8, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 39/83 (47%), Gaps = 10/83 (12%) Query 199 DLEDKMETSDIQIFYQEDPECQNLSENSCP-PSEVSDTNL---YSPFKPRNYQLELALPA 254 D+E + + + +E P + L+ P E+ N+ Y P +P L L +PA Sbjct 410 DMETLFDLQKVNVTIREAPNAKPLA---LPKGGEIRFENVTFGYYPDRPILRNLSLTIPA 466 Query 255 MKGKNTIICAPTGCGK-TFVSLL 276 GK + P+GCGK T + LL Sbjct 467 --GKKVAVVGPSGCGKSTLLRLL 487
>7pqx_A A Putative iron-sulfur protein
Length=700 Score = 34.3 bits (77), Expect = 7.8, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 39/83 (47%), Gaps = 10/83 (12%) Query 199 DLEDKMETSDIQIFYQEDPECQNLSENSCP-PSEVSDTNL---YSPFKPRNYQLELALPA 254 D+E + + + +E P + L+ P E+ N+ Y P +P L L +PA Sbjct 410 DMETLFDLQKVNVTIREAPNAKPLA---LPKGGEIRFENVTFGYYPDRPILRNLSLTIPA 466 Query 255 MKGKNTIICAPTGCGK-TFVSLL 276 GK + P+GCGK T + LL Sbjct 467 --GKKVAVVGPSGCGKSTLLRLL 487
>7psd_B A Putative iron-sulfur protein
Length=700 Score = 34.3 bits (77), Expect = 7.8, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 39/83 (47%), Gaps = 10/83 (12%) Query 199 DLEDKMETSDIQIFYQEDPECQNLSENSCP-PSEVSDTNL---YSPFKPRNYQLELALPA 254 D+E + + + +E P + L+ P E+ N+ Y P +P L L +PA Sbjct 410 DMETLFDLQKVNVTIREAPNAKPLA---LPKGGEIRFENVTFGYYPDRPILRNLSLTIPA 466 Query 255 MKGKNTIICAPTGCGK-TFVSLL 276 GK + P+GCGK T + LL Sbjct 467 --GKKVAVVGPSGCGKSTLLRLL 487
>4nho_A A Probable ATP-dependent RNA helicase DDX23
Length=496 Score = 34.3 bits (77), Expect = 7.8, Method: Compositional matrix adjust. Identities = 55/228 (24%), Positives = 88/228 (39%), Gaps = 31/228 (14%) Query 524 QMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIE 583 Q PD DE K L + S KY ++ + A M A++ L + A + Sbjct 243 QKPDTDEAEDPEKMLANFESGKHKYRQTVMFT--ATMPPAVERLARSYLRRPAVVYIGSA 300 Query 584 QDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDAL 643 +R E+K+ + +E+ K + L IL++ + + I+FV + D L Sbjct 301 GKPHERVEQKVFLM--------SESEKRKKLLAILEQGF----DPPIIIFVNQKKGCDVL 348 Query 644 KNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEG 703 +E G ++ L KA G +IL+AT V Sbjct 349 AKSLEK------------MGYNACTLXXXXXXXXREFALSNLKA-GAKDILVATDVXXXX 395 Query 704 IDIAQCNLVILYEYVGNVIKMIQTRGR-GRARGSKC---FLLTSNAGV 747 IDI ++V+ Y+ N+ I GR GRA S FL ++ V Sbjct 396 IDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAV 443
>8bic_B B methyltransferase Plu4891
Length=335 Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust. Identities = 31/121 (26%), Positives = 49/121 (40%), Gaps = 8/121 (7%) Query 536 KALFLYTSH---LRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEE 592 K F Y H R D+ + ++ + L + DF + R E +L R E Sbjct 141 KPFFEYLDHHELFRSNFDSFMSKNSDKIIEKLLDIYDFSQHNRILDVGGGEGNLLIRINE 200 Query 593 KLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPK 652 K++ D NE P LED+ FI + + L P + +K + + NW + N Sbjct 201 KIKGKHYAVLDRYNETPVLEDIEFINGDFFKLVPSGYDLYILK-----NVIHNWSDSNAI 255 Query 653 L 653 L Sbjct 256 L 256
>7pr1_A A Putative iron-sulfur protein
Length=700 Score = 34.3 bits (77), Expect = 8.0, Method: Compositional matrix adjust. Identities = 22/80 (28%), Positives = 35/80 (44%), Gaps = 4/80 (5%) Query 199 DLEDKMETSDIQIFYQEDPECQNLSENSCPPSEVSDTNL-YSPFKPRNYQLELALPAMKG 257 D+E + + + +E P + L+ + Y P +P L L +PA G Sbjct 410 DMETLFDLQKVNVTIREAPNAKPLALPKGGEIRFENVTFGYYPDRPILRNLSLTIPA--G 467 Query 258 KNTIICAPTGCGK-TFVSLL 276 K + P+GCGK T + LL Sbjct 468 KKVAVVGPSGCGKSTLLRLL 487
>7pr1_B B Putative iron-sulfur protein
Length=700 Score = 34.3 bits (77), Expect = 8.0, Method: Compositional matrix adjust. Identities = 22/80 (28%), Positives = 35/80 (44%), Gaps = 4/80 (5%) Query 199 DLEDKMETSDIQIFYQEDPECQNLSENSCPPSEVSDTNL-YSPFKPRNYQLELALPAMKG 257 D+E + + + +E P + L+ + Y P +P L L +PA G Sbjct 410 DMETLFDLQKVNVTIREAPNAKPLALPKGGEIRFENVTFGYYPDRPILRNLSLTIPA--G 467 Query 258 KNTIICAPTGCGK-TFVSLL 276 K + P+GCGK T + LL Sbjct 468 KKVAVVGPSGCGKSTLLRLL 487
>2fwr_D D DNA repair protein RAD25
Length=472 Score = 34.3 bits (77), Expect = 8.0, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 IL+ F+ +G ++++ V DEGID+ N+ ++ G+ + IQ GR Sbjct 386 ILEGFR-TGRFRAIVSSQVLDEGIDVPDANVGVIMSGSGSAREYIQRLGR 434
>2fwr_C C DNA repair protein RAD25
Length=472 Score = 34.3 bits (77), Expect = 8.0, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR 730 IL+ F+ +G ++++ V DEGID+ N+ ++ G+ + IQ GR Sbjct 386 ILEGFR-TGRFRAIVSSQVLDEGIDVPDANVGVIMSGSGSAREYIQRLGR 434
>2hjv_B B ATP-dependent RNA helicase dbpA
Length=163 Score = 33.1 bits (74), Expect = 8.0, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (2%) Query 672 GMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRG 731 GM + +++ FK G++ L+AT VA GIDI +LVI Y+ + GR Sbjct 68 GMIQEDRFDVMNEFK-RGEYRYLVATDVAARGIDIENISLVINYDLPLEKESYVHRTGRT 126 Query 732 RARGSK 737 G+K Sbjct 127 GRAGNK 132
>3ear_A A Hera
Length=212 Score = 33.1 bits (74), Expect = 8.9, Method: Composition-based stats. Identities = 16/35 (46%), Positives = 24/35 (69%), Gaps = 1/35 (3%) Query 681 ILDAFKASGDHNILIATSVADEGIDIAQCNLVILY 715 +L AF+ G+ +L+AT VA G+DI Q +LV+ Y Sbjct 73 VLGAFR-QGEVRVLVATDVAARGLDIPQVDLVVHY 106
>2zu6_D D Eukaryotic initiation factor 4A-I
Length=388 Score = 33.9 bits (76), Expect = 9.5, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 27/52 (52%), Gaps = 1/52 (2%) Query 680 CILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRG 731 I+ F+ SG +LI T + GID+ Q +LVI Y+ N I GRG Sbjct 295 VIMREFR-SGSSXVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRG 345 Lambda K H a alpha 0.319 0.136 0.401 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 107650539742 Database: unitmol_20240605.fasta Posted date: Jun 7, 2024 10:55 AM Number of letters in database: 243,118,326 Number of sequences in database: 844,130 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40