[Multiple Alignment(many alignments)]
[Alignment Bar(many alignments)]
[show plain BLAST file]
BLASTP 2.11.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: unitmol_20240904.fasta
870,205 sequences; 251,418,593 total letters
Query= sp|Q7TLC7|Y14_SARS Uncharacterized protein 14 OS=Severe acute
respiratory syndrome coronavirus OX=694009 GN=ORF14 PE=1 SV=1
Length=70
Score E
Sequences producing significant alignments: (Bits) Value
7jpu_C C Lymphocyte antigen 75 29.6 2.0
7jpu_B B Lymphocyte antigen 75 29.6 2.0
7jpu_A A Lymphocyte antigen 75 29.6 2.0
7jpu_D D Lymphocyte antigen 75 29.6 2.0
7jpt_A A Lymphocyte antigen 75 29.6 2.2
>7jpu_C C Lymphocyte antigen 75
Length=1722
Score = 29.6 bits (65), Expect = 2.0, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 0/64 (0%)
Query 5 CYNFLKEQHCQKASTQREAEAAVKPLLAPHHVVAVIQEIQLLAAVGEILLLEWLAEVVKL 64
CYNF+ ++ A+TQ E + L H++++ E + + ++L ++A V L
Sbjct 1255 CYNFIITKNRHMATTQDEVHTKCQKLNPKSHILSIRDEKENNFVLEQLLYFNYMASWVML 1314
Query 65 PSRY 68
Y
Sbjct 1315 GITY 1318
>7jpu_B B Lymphocyte antigen 75
Length=1722
Score = 29.6 bits (65), Expect = 2.0, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 0/64 (0%)
Query 5 CYNFLKEQHCQKASTQREAEAAVKPLLAPHHVVAVIQEIQLLAAVGEILLLEWLAEVVKL 64
CYNF+ ++ A+TQ E + L H++++ E + + ++L ++A V L
Sbjct 1255 CYNFIITKNRHMATTQDEVHTKCQKLNPKSHILSIRDEKENNFVLEQLLYFNYMASWVML 1314
Query 65 PSRY 68
Y
Sbjct 1315 GITY 1318
>7jpu_A A Lymphocyte antigen 75
Length=1722
Score = 29.6 bits (65), Expect = 2.0, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 0/64 (0%)
Query 5 CYNFLKEQHCQKASTQREAEAAVKPLLAPHHVVAVIQEIQLLAAVGEILLLEWLAEVVKL 64
CYNF+ ++ A+TQ E + L H++++ E + + ++L ++A V L
Sbjct 1255 CYNFIITKNRHMATTQDEVHTKCQKLNPKSHILSIRDEKENNFVLEQLLYFNYMASWVML 1314
Query 65 PSRY 68
Y
Sbjct 1315 GITY 1318
>7jpu_D D Lymphocyte antigen 75
Length=1722
Score = 29.6 bits (65), Expect = 2.0, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 0/64 (0%)
Query 5 CYNFLKEQHCQKASTQREAEAAVKPLLAPHHVVAVIQEIQLLAAVGEILLLEWLAEVVKL 64
CYNF+ ++ A+TQ E + L H++++ E + + ++L ++A V L
Sbjct 1255 CYNFIITKNRHMATTQDEVHTKCQKLNPKSHILSIRDEKENNFVLEQLLYFNYMASWVML 1314
Query 65 PSRY 68
Y
Sbjct 1315 GITY 1318
>7jpt_A A Lymphocyte antigen 75
Length=1693
Score = 29.6 bits (65), Expect = 2.2, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 0/64 (0%)
Query 5 CYNFLKEQHCQKASTQREAEAAVKPLLAPHHVVAVIQEIQLLAAVGEILLLEWLAEVVKL 64
CYNF+ ++ A+TQ E + L H++++ E + + ++L ++A V L
Sbjct 1226 CYNFIITKNRHMATTQDEVHTKCQKLNPKSHILSIRDEKENNFVLEQLLYFNYMASWVML 1285
Query 65 PSRY 68
Y
Sbjct 1286 GITY 1289
Lambda K H a alpha
0.324 0.135 0.422 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 6256465452
Database: unitmol_20240904.fasta
Posted date: Sep 5, 2024 12:15 PM
Number of letters in database: 251,418,593
Number of sequences in database: 870,205
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40