[Multiple Alignment(many alignments)]
[Alignment Bar(many alignments)]
[show plain BLAST file]
BLASTP 2.11.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: unitmol_20240904.fasta
870,205 sequences; 251,418,593 total letters
Query= sp|P0DTD2|ORF9B_SARS2 ORF9b protein OS=Severe acute respiratory
syndrome coronavirus 2 OX=2697049 GN=9b PE=1 SV=1
Length=97
Score E
Sequences producing significant alignments: (Bits) Value
7ye8_B B ORF9b protein 177 3e-58
6z4u_A A Protein 9b 164 4e-53
6z4u_B B Protein 9b 159 3e-51
7ye8_A A ORF9b protein 155 2e-49
7ye7_B D ORF9b protein 154 3e-49
7ye8_D D ORF9b protein 153 1e-48
7ye8_C C ORF9b protein 144 4e-45
7ye7_D B ORF9b protein 142 2e-44
7ye7_A C ORF9b protein 141 5e-44
7ye7_C A ORF9b protein 137 2e-42
2cme_B B HYPOTHETICAL PROTEIN 5 115 3e-34
2cme_A A HYPOTHETICAL PROTEIN 5 112 5e-33
2cme_H H HYPOTHETICAL PROTEIN 5 112 7e-33
2cme_F F HYPOTHETICAL PROTEIN 5 112 7e-33
2cme_D D HYPOTHETICAL PROTEIN 5 112 7e-33
2cme_C C HYPOTHETICAL PROTEIN 5 112 7e-33
2cme_G G HYPOTHETICAL PROTEIN 5 112 7e-33
2cme_E E HYPOTHETICAL PROTEIN 5 112 7e-33
7kdt_B B ORF9b protein 78.6 3e-19
7dhg_B B ORF9b protein 73.9 2e-17
>7ye8_B B ORF9b protein
Length=103
Score = 177 bits (448), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 88/88 (100%), Positives = 88/88 (100%), Gaps = 0/88 (0%)
Query 10 PALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAF 69
PALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAF
Sbjct 16 PALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAF 75
Query 70 QLTPIAVQMTKLATTEELPDEFVVVTVK 97
QLTPIAVQMTKLATTEELPDEFVVVTVK
Sbjct 76 QLTPIAVQMTKLATTEELPDEFVVVTVK 103
>6z4u_A A Protein 9b
Length=97
Score = 164 bits (414), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 84/97 (87%), Positives = 84/97 (87%), Gaps = 0/97 (0%)
Query 1 MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKT 60
MDPKISEMHPALRLVDPQIQLAVTR PKVYPIILRLGSPLSLNMARKT
Sbjct 1 MDPKISEMHPALRLVDPQIQLAVTRXXXXXXXXXXXXXPKVYPIILRLGSPLSLNMARKT 60
Query 61 LNSLEDKAFQLTPIAVQMTKLATTEELPDEFVVVTVK 97
LNSLEDKAFQLTPIAVQMTKLATTEELPDEFVVVTVK
Sbjct 61 LNSLEDKAFQLTPIAVQMTKLATTEELPDEFVVVTVK 97
>6z4u_B B Protein 9b
Length=97
Score = 159 bits (401), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 82/96 (85%), Positives = 82/96 (85%), Gaps = 0/96 (0%)
Query 2 DPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTL 61
DPKISEMHPALRLVDPQIQLAVT PKVYPIILRLGSPLSLNMARKTL
Sbjct 2 DPKISEMHPALRLVDPQIQLAVTXXXXXXXXXXXXXXPKVYPIILRLGSPLSLNMARKTL 61
Query 62 NSLEDKAFQLTPIAVQMTKLATTEELPDEFVVVTVK 97
NSLEDKAFQLTPIAVQMTKLATTEELPDEFVVVTVK
Sbjct 62 NSLEDKAFQLTPIAVQMTKLATTEELPDEFVVVTVK 97
>7ye8_A A ORF9b protein
Length=103
Score = 155 bits (391), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 79/89 (89%), Positives = 79/89 (89%), Gaps = 0/89 (0%)
Query 9 HPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKA 68
HPALRLVDPQIQLAVTRM VGPKVYPIILRLGSPLSLNMARKTLNSLEDKA
Sbjct 15 HPALRLVDPQIQLAVTRMXXXXXXXXXXVGPKVYPIILRLGSPLSLNMARKTLNSLEDKA 74
Query 69 FQLTPIAVQMTKLATTEELPDEFVVVTVK 97
FQLTPIAVQMTKLATTEELPDEFVVVTVK
Sbjct 75 FQLTPIAVQMTKLATTEELPDEFVVVTVK 103
>7ye7_B D ORF9b protein
Length=103
Score = 154 bits (389), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 78/87 (90%), Positives = 78/87 (90%), Gaps = 0/87 (0%)
Query 10 PALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAF 69
PALRLVDPQIQLAVTRME GRDQNNVGPKVYPIILRLGSPLSLNMARKTLNS KAF
Sbjct 16 PALRLVDPQIQLAVTRMEXXXGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSXXXKAF 75
Query 70 QLTPIAVQMTKLATTEELPDEFVVVTV 96
QLTPIAVQMTKLA ELPDEFVVVTV
Sbjct 76 QLTPIAVQMTKLAXXXELPDEFVVVTV 102
>7ye8_D D ORF9b protein
Length=103
Score = 153 bits (386), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 78/88 (89%), Positives = 78/88 (89%), Gaps = 0/88 (0%)
Query 9 HPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKA 68
HPALRLVDPQIQLAVTRM VGPKVYPIILRLGSPLSLNMARKTLNSLEDKA
Sbjct 15 HPALRLVDPQIQLAVTRMXXXXXXXXXXVGPKVYPIILRLGSPLSLNMARKTLNSLEDKA 74
Query 69 FQLTPIAVQMTKLATTEELPDEFVVVTV 96
FQLTPIAVQMTKLATTEELPDEFVVVTV
Sbjct 75 FQLTPIAVQMTKLATTEELPDEFVVVTV 102
>7ye8_C C ORF9b protein
Length=103
Score = 144 bits (363), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 75/87 (86%), Positives = 75/87 (86%), Gaps = 0/87 (0%)
Query 11 ALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQ 70
ALRLVDPQIQLAVT VGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQ
Sbjct 17 ALRLVDPQIQLAVTXXXXXXXXXXXXVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQ 76
Query 71 LTPIAVQMTKLATTEELPDEFVVVTVK 97
LTPIAVQMTKLATTEELPDEFVVVTVK
Sbjct 77 LTPIAVQMTKLATTEELPDEFVVVTVK 103
>7ye7_D B ORF9b protein
Length=103
Score = 142 bits (358), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 74/87 (85%), Positives = 74/87 (85%), Gaps = 0/87 (0%)
Query 10 PALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAF 69
PALRLVDPQIQLAVTRM VGPKVYPIILRLGSPLSLNMARKTLNS KAF
Sbjct 16 PALRLVDPQIQLAVTRMXXXXXXXXXXVGPKVYPIILRLGSPLSLNMARKTLNSXXXKAF 75
Query 70 QLTPIAVQMTKLATTEELPDEFVVVTV 96
QLTPIAVQMTKLATTEELPDEFVVVTV
Sbjct 76 QLTPIAVQMTKLATTEELPDEFVVVTV 102
>7ye7_A C ORF9b protein
Length=103
Score = 141 bits (355), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 74/88 (84%), Positives = 74/88 (84%), Gaps = 0/88 (0%)
Query 10 PALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAF 69
PALRLVDPQIQLAVT PKVYPIILRLGSPLSLNMARKTLNSLEDKAF
Sbjct 16 PALRLVDPQIQLAVTXXXXXXXXXXXXXXPKVYPIILRLGSPLSLNMARKTLNSLEDKAF 75
Query 70 QLTPIAVQMTKLATTEELPDEFVVVTVK 97
QLTPIAVQMTKLATTEELPDEFVVVTVK
Sbjct 76 QLTPIAVQMTKLATTEELPDEFVVVTVK 103
>7ye7_C A ORF9b protein
Length=103
Score = 137 bits (344), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 72/86 (84%), Positives = 72/86 (84%), Gaps = 0/86 (0%)
Query 11 ALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQ 70
ALRLVDPQIQLAVT PKVYPIILRLGSPLSLNMARKTLNSLEDKAFQ
Sbjct 17 ALRLVDPQIQLAVTXXXXXXXXXXXXXXPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQ 76
Query 71 LTPIAVQMTKLATTEELPDEFVVVTV 96
LTPIAVQMTKLATTEELPDEFVVVTV
Sbjct 77 LTPIAVQMTKLATTEELPDEFVVVTV 102
>2cme_B B HYPOTHETICAL PROTEIN 5
Length=79
Score = 115 bits (289), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 68/88 (77%), Gaps = 11/88 (13%)
Query 10 PALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAF 69
PAL LVDPQIQL +TR + PKVYPIILRLGS LSL+MAR+ L+SLE +AF
Sbjct 3 PALHLVDPQIQLTITRAD-----------PKVYPIILRLGSNLSLSMARRNLDSLEARAF 51
Query 70 QLTPIAVQMTKLATTEELPDEFVVVTVK 97
Q TPI VQMTKLATTEELPDEFVVVT K
Sbjct 52 QSTPIVVQMTKLATTEELPDEFVVVTAK 79
>2cme_A A HYPOTHETICAL PROTEIN 5
Length=78
Score = 112 bits (280), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 66/88 (75%), Gaps = 12/88 (14%)
Query 10 PALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAF 69
PAL LVDPQIQL +T PKVYPIILRLGS LSL+MAR+ L+SLE +AF
Sbjct 3 PALHLVDPQIQLTIT------------ADPKVYPIILRLGSNLSLSMARRNLDSLEARAF 50
Query 70 QLTPIAVQMTKLATTEELPDEFVVVTVK 97
Q TPI VQMTKLATTEELPDEFVVVT K
Sbjct 51 QSTPIVVQMTKLATTEELPDEFVVVTAK 78
>2cme_H H HYPOTHETICAL PROTEIN 5
Length=76
Score = 112 bits (279), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 66/88 (75%), Gaps = 13/88 (15%)
Query 10 PALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAF 69
PAL LVDPQIQL +T PKVYPIILRLGS LSL+MAR+ L+SLE +AF
Sbjct 2 PALHLVDPQIQLTIT-------------DPKVYPIILRLGSNLSLSMARRNLDSLEARAF 48
Query 70 QLTPIAVQMTKLATTEELPDEFVVVTVK 97
Q TPI VQMTKLATTEELPDEFVVVT K
Sbjct 49 QSTPIVVQMTKLATTEELPDEFVVVTAK 76
>2cme_F F HYPOTHETICAL PROTEIN 5
Length=76
Score = 112 bits (279), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 66/88 (75%), Gaps = 13/88 (15%)
Query 10 PALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAF 69
PAL LVDPQIQL +T PKVYPIILRLGS LSL+MAR+ L+SLE +AF
Sbjct 2 PALHLVDPQIQLTIT-------------DPKVYPIILRLGSNLSLSMARRNLDSLEARAF 48
Query 70 QLTPIAVQMTKLATTEELPDEFVVVTVK 97
Q TPI VQMTKLATTEELPDEFVVVT K
Sbjct 49 QSTPIVVQMTKLATTEELPDEFVVVTAK 76
>2cme_D D HYPOTHETICAL PROTEIN 5
Length=76
Score = 112 bits (279), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 66/88 (75%), Gaps = 13/88 (15%)
Query 10 PALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAF 69
PAL LVDPQIQL +T PKVYPIILRLGS LSL+MAR+ L+SLE +AF
Sbjct 2 PALHLVDPQIQLTIT-------------DPKVYPIILRLGSNLSLSMARRNLDSLEARAF 48
Query 70 QLTPIAVQMTKLATTEELPDEFVVVTVK 97
Q TPI VQMTKLATTEELPDEFVVVT K
Sbjct 49 QSTPIVVQMTKLATTEELPDEFVVVTAK 76
>2cme_C C HYPOTHETICAL PROTEIN 5
Length=76
Score = 112 bits (279), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 66/88 (75%), Gaps = 13/88 (15%)
Query 10 PALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAF 69
PAL LVDPQIQL +T PKVYPIILRLGS LSL+MAR+ L+SLE +AF
Sbjct 2 PALHLVDPQIQLTIT-------------DPKVYPIILRLGSNLSLSMARRNLDSLEARAF 48
Query 70 QLTPIAVQMTKLATTEELPDEFVVVTVK 97
Q TPI VQMTKLATTEELPDEFVVVT K
Sbjct 49 QSTPIVVQMTKLATTEELPDEFVVVTAK 76
>2cme_G G HYPOTHETICAL PROTEIN 5
Length=77
Score = 112 bits (279), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 66/88 (75%), Gaps = 13/88 (15%)
Query 10 PALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAF 69
PAL LVDPQIQL +T PKVYPIILRLGS LSL+MAR+ L+SLE +AF
Sbjct 3 PALHLVDPQIQLTIT-------------DPKVYPIILRLGSNLSLSMARRNLDSLEARAF 49
Query 70 QLTPIAVQMTKLATTEELPDEFVVVTVK 97
Q TPI VQMTKLATTEELPDEFVVVT K
Sbjct 50 QSTPIVVQMTKLATTEELPDEFVVVTAK 77
>2cme_E E HYPOTHETICAL PROTEIN 5
Length=77
Score = 112 bits (279), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 66/88 (75%), Gaps = 13/88 (15%)
Query 10 PALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAF 69
PAL LVDPQIQL +T PKVYPIILRLGS LSL+MAR+ L+SLE +AF
Sbjct 3 PALHLVDPQIQLTIT-------------DPKVYPIILRLGSNLSLSMARRNLDSLEARAF 49
Query 70 QLTPIAVQMTKLATTEELPDEFVVVTVK 97
Q TPI VQMTKLATTEELPDEFVVVT K
Sbjct 50 QSTPIVVQMTKLATTEELPDEFVVVTAK 77
>7kdt_B B ORF9b protein
Length=97
Score = 78.6 bits (192), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 38/38 (100%), Positives = 38/38 (100%), Gaps = 0/38 (0%)
Query 39 PKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAV 76
PKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAV
Sbjct 39 PKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAV 76
>7dhg_B B ORF9b protein
Length=97
Score = 73.9 bits (180), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 36/36 (100%), Positives = 36/36 (100%), Gaps = 0/36 (0%)
Query 43 PIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQM 78
PIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQM
Sbjct 43 PIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQM 78
Lambda K H a alpha
0.317 0.133 0.364 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 6235368576
Database: unitmol_20240904.fasta
Posted date: Sep 5, 2024 12:15 PM
Number of letters in database: 251,418,593
Number of sequences in database: 870,205
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40