Contact Molecules for Homologous Proteins


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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
580 73 0 P0DTD3(ORF9C_SARS2) RecName: Full=Putative ORF9c protein ; Short=ORF9c;AltName: Full=Uncharacterized protein 14; Short=ORF14;
QUERYSEQ
MLQSCYNFLKEQHCQKASTQKGAEAAVKPLLVPHHVVATVQEIQLQAAVGELLLLEWLAMAVMLLLLCCCLTD
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]
  [n]:site number of query sequence.  [a]:amino acid of query sequence.  [s]:predicted secondary structure.
  [e]:predicted exposed/buried.  [acc]:predicted relative accesssibility(%).  [pdb]:PDB code of homologous structure.
  [contact_mols]:predicted binding molecules  [observed aa]:Observed amino acids among homologous sequences.  [feature table]:UniProt Feature Table
  [variant]:UniProt Human Variant.
n a s e acc pdb contact_mols observed aa feature table variant
1M----
M
DISORDER predicted by DISOPRED
2L----
L
3Q----
PQ
4S----
SP
5C----
C
6Y----
Y
7N----
N
8F----
F
9L----
L
10K----
K
11E----
E
12Q----
Q
13H----
H
14C----
C
15Q----
Q
16K----
K
17A----
A
18S----
S
19T----
T
20Q----
Q
21K----
KR
22G----
GE
23A----
A
24E----
E
25A----
A
26A----
A
27V----
V
28K----
K
29P----
P
30L----
L
31L----
L
32V----
AV
33P----
PL
34H----
H
35H----
H
36V----
V
37V----
V
38A----
A
39T----
VT
40V----
IV
41Q----
Q
42E----
E
43I----
I
44Q----
Q
45L----
L
46Q----
LQ
47A----
A
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
48A----
A
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
49V----
V
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
50G----
G
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
51E----
E
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
52L----
IL
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
53L----
L
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
54L----
LQ
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
55L----
L
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
56E----
E
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
57W----
W
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
58L----
L
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
59A----
A
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
60M----
EM
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
61A----
AV
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
62V----
V
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
63M----
KM
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
64L----
L
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
65L----
PL
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
66L----
SL
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
67L----
RL
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
68C----
YC
69C----
C
70C----
C
71L----
72T----
73D----