Contact Molecules for Homologous Proteins


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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
31044 122 4 P59635(NS7A_SARS) RecName: Full=ORF7a protein;AltName: Full=Accessory protein 7a;AltName: Full=Protein U122;AltName: Full=Protein X4;Flags: Precursor;
QUERYSEQ
MKIILFLTLIVFTSCELYHYQECVRGTTVLLKEPCPSGTYEGNSPFHPLADNKFALTCTSTHFAFACADGTRHTYQLRARSVSPKLFIRQEEVQQELYSPLFLIVAALVFLILCFTIKRKTE
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]
  [n]:site number of query sequence.  [a]:amino acid of query sequence.  [s]:predicted secondary structure.
  [e]:predicted exposed/buried.  [acc]:predicted relative accesssibility(%).  [pdb]:PDB code of homologous structure.
  [contact_mols]:predicted binding molecules  [observed aa]:Observed amino acids among homologous sequences.  [feature table]:UniProt Feature Table
  [variant]:UniProt Human Variant.
n a s e acc pdb contact_mols observed aa feature table variant
1M----
M
SIGNAL DISORDER predicted by DISOPRED SIGNAL
2K----
K
SIGNAL DISORDER predicted by DISOPRED SIGNAL
3I----
I
SIGNAL DISORDER predicted by DISOPRED SIGNAL
4I----
I
SIGNAL DISORDER predicted by DISOPRED SIGNAL
5L----
L
SIGNAL DISORDER predicted by DISOPRED SIGNAL
6F----
F
SIGNAL DISORDER predicted by DISOPRED SIGNAL
7L----
L
SIGNAL DISORDER predicted by DISOPRED SIGNAL
8T----
TA
SIGNAL DISORDER predicted by DISOPRED SIGNAL
9L----
L
SIGNAL DISORDER predicted by DISOPRED SIGNAL
10I----
I
SIGNAL DISORDER predicted by DISOPRED SIGNAL
11V----
TVA
SIGNAL SIGNAL
12F----
LF
SIGNAL SIGNAL
13T----
AT
SIGNAL SIGNAL
14S e109.7 7ci3_A
ST
MUTAGEN /note="SCELY->LLLLL: Complete loss of signal sequence cleavage." SIGNAL MUTAGEN /note="SCELY->LLLLL: Complete loss of signal sequence cleavage." SIGNAL
15C e 50.0 7ci3_A
C
MUTAGEN /note="SCELY->LLLLL: Complete loss of signal sequence cleavage." SIGNAL MUTAGEN /note="SCELY->LLLLL: Complete loss of signal sequence cleavage." SIGNAL
16EBe 45.2 1yo4_A
E
MUTAGEN /note="SCELY->LLLLL: Complete loss of signal sequence cleavage." DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" MUTAGEN /note="SCELY->LLLLL: Complete loss of signal sequence cleavage." DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
17L e 53.4 1yo4_A
L
MUTAGEN /note="SCELY->LLLLL: Complete loss of signal sequence cleavage." DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" MUTAGEN /note="SCELY->LLLLL: Complete loss of signal sequence cleavage." DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
18Y e 53.9 1yo4_A
Y
MUTAGEN /note="SCELY->LLLLL: Complete loss of signal sequence cleavage." DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" MUTAGEN /note="SCELY->LLLLL: Complete loss of signal sequence cleavage." DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
19HEe 40.8 1yo4_A
H
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
20YEe 52.6 1yo4_A
Y
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
21QEe 37.2 1yo4_A
Q
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
22EEb 18.6 1yo4_A
E
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
23CEb 9.3 1yo4_A
C
DISULFID DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DISULFID DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
24VEe 52.7 1yo4_A
V
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
25RTe 64.0 1yo4_A
R
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
26GTe 51.2 1yo4_A
G
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
27TSe 56.5 1yo4_A
T
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
28TEe 69.5 1yo4_A
T
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
29VEb 8.0 1yo4_A
V
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
30LEe 54.5 1yo4_A
L
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
31LEb 12.4 1yo4_A
L
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
32KEe 46.7 1yo4_A
K
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
33E b 16.1 1yo4_A
E
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
34PSe 34.1 1yo4_A
P
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
35CSb 11.3 1yo4_A
C
DISULFID DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DISULFID DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
36PSe 75.2 1yo4_A
PS
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
37SSe 85.2 1yo4_A
S
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
38G e 28.6 1yo4_A
G
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
39TEe 74.7 1yo4_A
T
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
40YEb 16.1 1yo4_A
Y
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
41EEe 40.7 1yo4_A
E
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
42GSe 48.8 1yo4_A
G
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
43NSe 89.7 1yo4_A
N
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
44SSb 6.2 1yo4_A
S
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
45P e 48.8 1yo4_A
P
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
46F e 37.3 1yo4_A
F
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
47H e 61.3 1yo4_A
H
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
48PEe 62.0 1yo4_A
P
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
49LEe 59.0 1yo4_A
L
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
50ATe 64.3 1yo4_A
A
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
51DTe 63.0 1yo4_A
D
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
52NTe 60.6 1yo4_A
N
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
53KEb 19.3 1yo4_A
K
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
54FEb 0.5 1yo4_A
F
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
55AEb 4.5 1yo4_A
A
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
56LEb 0.6 1yo4_A
L
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
57TEe 50.0 1yo4_A
T
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
58C b 0.0 1yo4_A
C
DISULFID DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DISULFID DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
59T e 37.7 1yo4_A
TF
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
60SSe 51.6 1yo4_A
S
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
61TEb 11.0 1yo4_A
T
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
62HEe 58.1 1yo4_A
HQ
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
63FEb 2.4 1yo4_A
F
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
64AEb 0.9 1yo4_A
A
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
65FEb 1.0 1yo4_A
F
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
66AEb 13.4 1yo4_A
A
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
67C b 6.0 1yo4_A
C
DISULFID DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DISULFID DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
68ATe 82.1 1yo4_A
AP
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
69DTe 75.9 1yo4_A
D
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
70GSe 44.0 1yo4_A
G
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
71T b 19.5 1yo4_A
TV
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
72REe 29.2 1yo4_A
RK
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
73HEb 10.5 1yo4_A
H
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
74TEb 7.1 1yo4_A
TV
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
75YEb 7.0 1yo4_A
Y
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
76QEe 40.3 1yo4_A
Q
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
77LEb 2.8 1yo4_A
L
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
78REe 30.4 1yo4_A
R
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
79AEb 12.5 1yo4_A
A
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
80REe 42.7 1yo4_A
R
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
81S b 12.5 1yo4_A
S
DOMAIN /note="X4e" TOPO_DOM /note="Virion surface" DOMAIN /note="X4e" TOPO_DOM /note="Virion surface"
82VSe111.3 1yo4_A
V
TOPO_DOM /note="Virion surface" TOPO_DOM /note="Virion surface"
83SSe 35.9 1yo4_A
S
TOPO_DOM /note="Virion surface" TOPO_DOM /note="Virion surface"
84PSe 23.3 1yo4_A
P
TOPO_DOM /note="Virion surface" TOPO_DOM /note="Virion surface"
85K e 69.3 1yo4_A
K
TOPO_DOM /note="Virion surface" TOPO_DOM /note="Virion surface"
86L e 38.8 1yo4_A
L
TOPO_DOM /note="Virion surface" TOPO_DOM /note="Virion surface"
87F e 73.7 1yo4_A
F
TOPO_DOM /note="Virion surface" TOPO_DOM /note="Virion surface"
88I e 66.1 1yo4_A
I
TOPO_DOM /note="Virion surface" TOPO_DOM /note="Virion surface"
89RSe105.1 1yo4_A
R
TOPO_DOM /note="Virion surface" TOPO_DOM /note="Virion surface"
90QSe 60.2 1yo4_A
Q
TOPO_DOM /note="Virion surface" TOPO_DOM /note="Virion surface"
91ESe 29.6 1yo4_A
E
TOPO_DOM /note="Virion surface" TOPO_DOM /note="Virion surface"
92ESb 12.1 1yo4_A
E
TOPO_DOM /note="Virion surface" TOPO_DOM /note="Virion surface"
93VSe 40.7 1yo4_A
V
TOPO_DOM /note="Virion surface" TOPO_DOM /note="Virion surface"
94Q b 9.2 1yo4_A
QHAGLDEIKNPRSTVCFMY
TOPO_DOM /note="Virion surface" TOPO_DOM /note="Virion surface"
95QSe 81.6 1yo4_A
Q
TOPO_DOM /note="Virion surface" TOPO_DOM /note="Virion surface"
96ESe 42.7 1yo4_A
E
TOPO_DOM /note="Virion surface" TOPO_DOM /note="Virion surface"
97LSe 61.2 1yo4_A
L
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
98Y e 47.0 1yo4_A
Y
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
99S e 43.0 1yo4_A
S
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
100P----
P
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
101L----
LI
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
102F----
F
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
103L----
L
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
104I----
I
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
105V----
V
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
106A----
A
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
107A----
A
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
108L----
LI
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
109V----
V
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
110F----
F
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
111L----
IL
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
112I----
TI
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
113L----
L
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
114C----
C
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
115F----
F
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
116T----
T
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
117I----
IL
TRANSMEM /note="Helical" TRANSMEM /note="Helical"
118K----
K
MUTAGEN /note="KRK->ERE: Induces rapid exit from the endoplasmic reticulum." TOPO_DOM /note="Intravirion" MOTIF /note="Di-lysine motif" MUTAGEN /note="KRK->ERE: Induces rapid exit from the endoplasmic reticulum." TOPO_DOM /note="Intravirion" MOTIF /note="Di-lysine motif"
119R----
R
MUTAGEN /note="KRK->ERE: Induces rapid exit from the endoplasmic reticulum." TOPO_DOM /note="Intravirion" MOTIF /note="Di-lysine motif" MUTAGEN /note="KRK->ERE: Induces rapid exit from the endoplasmic reticulum." TOPO_DOM /note="Intravirion" MOTIF /note="Di-lysine motif"
120K----
K
MUTAGEN /note="KRK->ERE: Induces rapid exit from the endoplasmic reticulum." TOPO_DOM /note="Intravirion" MOTIF /note="Di-lysine motif" MUTAGEN /note="KRK->ERE: Induces rapid exit from the endoplasmic reticulum." TOPO_DOM /note="Intravirion" MOTIF /note="Di-lysine motif"
121T----
T
TOPO_DOM /note="Intravirion" MOTIF /note="Di-lysine motif" TOPO_DOM /note="Intravirion" MOTIF /note="Di-lysine motif"
122E----
E
TOPO_DOM /note="Intravirion" MOTIF /note="Di-lysine motif" DISORDER predicted by DISOPRED TOPO_DOM /note="Intravirion" MOTIF /note="Di-lysine motif"