Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
3652451 | 207 | 40 | P51149(RAB7A_HUMAN) | RecName: Full=Ras-related protein Rab-7a ; EC=3.6.5.2 ; |
QUERYSEQ |
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIP YFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKLDKNDRAKASAESCSC |
[n]:site number of query sequence. [a]:amino acid of query sequence. [s]:predicted secondary structure. [e]:predicted exposed/buried. [acc]:predicted relative accesssibility(%). [pdb]:PDB code of homologous structure. [contact_mols]:predicted binding molecules [observed aa]:Observed amino acids among homologous sequences. [feature table]:UniProt Feature Table [variant]:UniProt Human Variant.
n | a | s | e | acc | pdb | contact_mols | observed aa | feature table | variant |
1 | M | - | - | - | - | M |
INIT_MET /note="Removed" INIT_MET /note="Removed" DISORDER predicted by DISOPRED | ||
2 | T | - | - | - | - | STANDLGPV |
MOD_RES /note="N-acetylthreonine" MOD_RES /note="N-acetylthreonine" DISORDER predicted by DISOPRED | ||
3 | S | e | 142.2 | 1yhn_A | hetero RILP_HUMAN | SPNGKTAEDIQFLY |
DISORDER predicted by DISOPRED | ||
4 | R | e | 41.9 | 1yhn_A | RKQENGSTDHIYP |
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5 | K | e | 62.3 | 1yhn_A | hetero WDR91_HUMAN | KRSQYENADFHLPT |
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6 | K | e | 66.0 | 1vg0_B | hetero WDR91_HUMAN | KEDSRNIQVPAH |
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7 | V | e | 54.0 | 1vg8_D | VLIAKPTDGHSYENRFMCQ |
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8 | L | E | e | 46.1 | 1vg8_D | hetero RILP_HUMAN G0SGS3_CHATD WDR91_HUMAN PDZD8_HUMAN | LVEIAFRDMQKNSTY |
MUTAGEN /note="L->A: Abolishes interaction with RILP and reduces its localization to late endosomal/lysosomal compartments." MUTAGEN /note="L->A: Abolishes interaction with RILP and reduces its localization to late endosomal/lysosomal compartments." | |
9 | L | E | b | 0.0 | 1vg8_D | FLIVMYARCHS |
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10 | K | E | b | 16.5 | 1vg8_D | hetero RILP_HUMAN G0SGS3_CHATD PDZD8_HUMAN WDR91_HUMAN | KREHNQST |
MUTAGEN /note="K->A: Abolishes interaction with RILP and localization to late endosomal/lysosomal compartments." MUTAGEN /note="K->A: Abolishes interaction with RILP and localization to late endosomal/lysosomal compartments." | |
11 | V | E | b | 0.0 | 1vg8_D | VILCFAMTY |
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12 | I | E | b | 0.0 | 1vg8_D | VLIATGMCS |
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13 | I | E | b | 1.2 | 1vg8_D | LVIMFTACS |
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14 | L | E | b | 0.0 | 1vg8_D | VLIAMCFNRT |
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15 | G | b | 0.0 | 1vg8_D | G |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | |||
16 | D | e | 20.4 | 1vg8_D | hetero PDZD8_HUMAN compound GTP GNP GDP 2UK 2UH 2UJ precipitant | DLAERNSPGHQYKM |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | ||
17 | S | T | e | 36.7 | 1vg8_D | hetero RAE1_RAT compound GTP GNP GDP 2UK 2UH 2UJ precipitant | SGPADRQVYLNTCEIKM |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | |
18 | G | T | e | 41.7 | 1vg8_D | compound GTP GNP GDP 2UK 2UH 2UJ precipitant | GANSDECKQRTFHLMY |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | |
19 | V | S | b | 0.0 | 1vg8_D | compound GTP GNP GDP 2UK 2UH 2UJ precipitant | VASTCHI |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | |
20 | G | S | b | 14.3 | 1vg8_D | compound GTP GNP GDP 2UK 2UH 2UJ precipitant | GA |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | |
21 | K | H | b | 5.7 | 1vg8_D | compound GTP GNP GDP 2UK 2UH 2UJ metal MG precipitant | KI |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | |
22 | T | H | e | 26.6 | 1vg8_D | compound GTP GNP GDP 2UK 2UH 2UJ metal MG precipitant | TSGKL |
MUTAGEN /note="T->N: Abolishes localization on late endosomes, lysosomes and phagosomes and reduces phagosomal fusions. Abolishes association of RILP with the phagosomes. No loss of interaction with CLN5. No loss of interaction with PRPH. Reduced interaction with VPS13A. Inhibits SARS-CoV-2 infection." ECO:0000269|PubMed:22431521, ECO:0000269|PubMed:23179371, ECO:0000269|PubMed:30709847, ECO:0000269|PubMed:34159616" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" MUTAGEN /note="T->N: Abolishes localization on late endosomes, lysosomes and phagosomes and reduces phagosomal fusions. Abolishes association of RILP with the phagosomes. No loss of interaction with CLN5. No loss of interaction with PRPH. Reduced interaction with VPS13A. Inhibits SARS-CoV-2 infection." ECO:0000269|PubMed:22431521, ECO:0000269|PubMed:23179371, ECO:0000269|PubMed:30709847, ECO:0000269|PubMed:34159616" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | |
23 | S | H | e | 27.3 | 1vg8_D | compound GTP GNP GDP 2UK 2UH 2UJ | SATCNQEFKRV |
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24 | L | H | b | 1.1 | 1vg8_D | LIFMVT |
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25 | M | H | b | 5.3 | 1vg8_D | LVITAMCFRW |
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26 | N | H | e | 21.8 | 1vg8_D | NILVHKESQRYFMTADGC |
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27 | Q | H | b | 11.2 | 1vg8_D | precipitant | RQSAVKLTCEINFHMY |
||
28 | Y | H | b | 2.2 | 1vg8_D | FLYIHADRSTVW |
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29 | V | H | b | 18.7 | 1vg8_D | TLVAICSMGKRQDFHN |
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30 | N | H | e | 46.7 | 1vg8_D | hetero G0SGS3_CHATD | TDGKEQSNRHYLACFM |
||
31 | K | S | e | 67.9 | 1vg8_D | metal YT3 | GNKDRESTLQAHV |
||
32 | K | e | 56.1 | 1vg8_D | hetero G0SGS3_CHATD | ERKQTSAHDIGNPVCLMY |
K->E:(17.0 %):LB/B - dbSNP:rs1154975 | ||
33 | F | e | 34.4 | 1vg8_D | hetero G0SGS3_CHATD compound GTP GNP GDP 2UK 2UH 2UJ | FYVIADGLTEKPRSW |
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34 | S | e | 50.0 | 1vg8_D | compound GTP GNP GDP 2UK 2UJ | SPVEADINQTGLKRCFHMY |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | ||
35 | N | S | e | 77.0 | 1vg8_D | hetero G0SGS3_CHATD compound GTP GNP 2UK GDP 2UH 2UJ | EDKSTGPNIALMQVHFRY |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | |
36 | Q | S | e | 79.1 | 1vg8_D | compound GTP 2UJ | EDQKVGNSTAHRIPFLMY |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | |
37 | Y | e | 59.6 | 1vg8_D | hetero G0SGS3_CHATD G0SD94_CHATD compound GTP GNP 2UK 2UJ | YHTSEVFILPQCMAKRW |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" MOTIF /note="Effector region" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" MOTIF /note="Effector region" | ||
38 | K | e | 61.8 | 1vg8_D | hetero RILP_HUMAN PDZD8_HUMAN compound GNP 2UK GTP precipitant | EKDIVAQTLSGPRHNFMY |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" MOTIF /note="Effector region" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" MOTIF /note="Effector region" | ||
39 | A | b | 11.6 | 1vg8_D | compound GTP GNP 2UK 2UJ | PASGLTQCEHKMNRIVWY |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" MOTIF /note="Effector region" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" MOTIF /note="Effector region" | ||
40 | T | e | 21.4 | 1vg8_D | hetero G0SD94_CHATD compound GTP GNP 2UK 2UJ metal MG | TGSNEPIVAKLQW |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" MOTIF /note="Effector region" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" MOTIF /note="Effector region" | ||
41 | I | e | 57.3 | 1vg8_D | hetero RILP_HUMAN G0SGS3_CHATD PDZD8_HUMAN G0SD94_CHATD OSBL1_MOUSE RUBIC_HUMAN | IVLTAENQSDFGHKY |
MOTIF /note="Effector region" MOTIF /note="Effector region" | ||
42 | G | S | b | 17.9 | 1vg8_D | hetero RAE1_RAT PDZD8_HUMAN OSBL1_MOUSE RUBIC_HUMAN | GFTEAPSLQRDHIKNVY |
MOTIF /note="Effector region" MOTIF /note="Effector region" | |
43 | A | E | e | 22.3 | 1vg8_D | hetero RAE1_RAT RILP_HUMAN PDZD8_HUMAN OSBL1_MOUSE RUBIC_HUMAN | VEAIRDFGLQCNSPKT |
MOTIF /note="Effector region" MOTIF /note="Effector region" | |
44 | D | E | e | 68.5 | 1vg8_D | hetero RAE1_RAT RILP_HUMAN PDZD8_HUMAN OSBL1_MOUSE RUBIC_HUMAN | DNETARSHIKLYCGV |
MOTIF /note="Effector region" MOTIF /note="Effector region" | |
45 | F | E | e | 37.3 | 1vg8_D | hetero RAE1_RAT RILP_HUMAN G0SGS3_CHATD PDZD8_HUMAN WDR91_HUMAN | FYVILSTMQRACDEGHKNP |
MOTIF /note="Effector region" MOTIF /note="Effector region" | |
46 | L | E | e | 32.6 | 1vg8_D | YLVKGAFHIRDENSQTCMP |
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47 | T | E | e | 42.2 | 1vg8_D | hetero RILP_HUMAN G0SGS3_CHATD | TSRVAEIKNLPYDMCFHQW |
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48 | K | E | e | 20.3 | 1vg8_D | KRQAELTPSVGHIYDFNW |
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49 | E | E | e | 53.3 | 1vg8_D | hetero G0SGS3_CHATD | ETQSHKDNVAIRLPFGMY |
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50 | V | E | b | 16.7 | 1vg8_D | VILMFCYAESTDGNW |
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51 | M | E | e | 52.7 | 1vg8_D | TEVMQSHILNYADFPRCGK |
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52 | V | S | b | 4.0 | 1vg8_D | VILTPYAGKMRCEFNQSW |
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53 | D | S | e | 67.3 | 1vg8_D | DENGKRSTPQAFHL |
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54 | D | S | e | 93.2 | 1vg8_D | GDNESKHACFILQRTVY |
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55 | R | e | 49.0 | 1vg8_D | KREQTGADNSHIVLMP |
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56 | L | E | e | 59.0 | 1vg8_D | TLKPSERVQDGIANCFHMY |
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57 | V | E | b | 1.3 | 1vg8_D | VILYCFAMHTEKPS |
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58 | T | E | e | 21.4 | 1vg8_D | hetero RILP_HUMAN G0SGS3_CHATD WDR91_HUMAN | KTLSRNPEHVADGIMQCFY |
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59 | M | E | b | 0.0 | 1vg8_D | hetero G0SGS3_CHATD | LFIVAMTCEY |
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60 | Q | E | b | 14.3 | 1vg8_D | hetero RILP_HUMAN G0SGS3_CHATD WDR91_HUMAN PDZD8_HUMAN | QEDHNGKRLAMSTFIV |
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61 | I | E | b | 0.0 | 1vg8_D | ILVFMACT |
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62 | W | E | b | 11.2 | 1vg8_D | hetero RAE1_RAT RILP_HUMAN G0SGS3_CHATD PDZD8_HUMAN WDR91_HUMAN RUBIC_HUMAN | WLFIYVQRMTCH |
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63 | D | E | b | 6.8 | 1vg8_D | hetero RAE1_RAT compound GTP metal MG | DEAGN |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | |
64 | T | E | b | 3.9 | 1vg8_D | compound GNP GTP 2UK metal MG | TIVELSAFCGMNPY |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | |
65 | A | b | 0.9 | 1vg8_D | hetero RAE1_RAT compound GTP GNP 2UJ 2UK | AGPSCENRDFHKQTVW |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | ||
66 | G | S | b | 15.5 | 1vg8_D | hetero PDZD8_HUMAN compound GTP GNP 2UK 2UJ | GSDEAKPQ |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | |
67 | Q | S | e | 20.9 | 1vg8_D | hetero RAE1_RAT G0SD94_CHATD OSBL1_MOUSE compound GTP | QHSLDGKPTAEINCMRW |
MUTAGEN /note="Q->L: Does not abolish localization on late endosomes, lysosomes and phagosomes and does not reduce phagosomal fusions. No loss of interaction with CLN5 and VPS13A. Increases interaction with PRPH. Inhibits SARS-CoV- 2 infection." ECO:0000269|PubMed:22431521, ECO:0000269|PubMed:23179371, ECO:0000269|PubMed:30709847, ECO:0000269|PubMed:34159616" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" MUTAGEN /note="Q->L: Does not abolish localization on late endosomes, lysosomes and phagosomes and does not reduce phagosomal fusions. No loss of interaction with CLN5 and VPS13A. Increases interaction with PRPH. Inhibits SARS-CoV- 2 infection." ECO:0000269|PubMed:22431521, ECO:0000269|PubMed:23179371, ECO:0000269|PubMed:30709847, ECO:0000269|PubMed:34159616" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | |
68 | E | G | e | 81.4 | 1vg8_D | hetero G0SD94_CHATD PDZD8_HUMAN compound GTP metal YT3 | EDPAQRSGHKNCFILTVY |
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69 | R | G | e | 73.9 | 1vg8_D | hetero RAE1_RAT G0SD94_CHATD OSBL1_MOUSE PDZD8_HUMAN | REKDASHQFGILTYCNPVW |
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70 | F | G | e | 27.3 | 1vg8_D | hetero RAE1_RAT RILP_HUMAN PDZD8_HUMAN OSBL1_MOUSE | FYLVAIGCHKDEMNQW |
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71 | Q | S | e | 37.8 | 1vg8_D | hetero RAE1_RAT OSBL1_HUMAN PDZD8_HUMAN metal K precipitant | REQSDKGNTHLAPCVY |
||
72 | S | e | 33.6 | 1vg8_D | hetero RAE1_RAT RILP_HUMAN RUBIC_HUMAN PDZD8_HUMAN | SARTEGKNQPCDIVFHLW |
MOD_RES /note="Phosphoserine" ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163" MOD_RES /note="Phosphoserine" ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163" | ||
73 | L | S | e | 99.4 | 1vg8_D | hetero RILP_HUMAN G0SGS3_CHATD PDZD8_HUMAN OSBL1_MOUSE RUBIC_HUMAN | LMIVTCFAEGHKNPQRSWY |
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74 | G | e | 60.7 | 1vg8_D | hetero RAE1_RAT RUBIC_HUMAN PDZD8_HUMAN | RGTWAPNDILSQVCEFHK |
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75 | V | e | 24.0 | 1vg8_D | hetero RAE1_RAT PDZD8_HUMAN WDR91_HUMAN RUBIC_HUMAN | PDSRIEAKVTLQHNCFGMY |
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76 | A | G | e | 48.2 | 1vg8_D | hetero RAE1_RAT RILP_HUMAN G0SGS3_CHATD WDR91_HUMAN RUBIC_HUMAN PDZD8_HUMAN | ASLHQREKMITVGCDFNPW |
||
77 | F | G | b | 14.4 | 1vg8_D | hetero RAE1_RAT RILP_HUMAN G0SGS3_CHATD PDZD8_HUMAN WDR91_HUMAN OSBL1_MOUSE RUBIC_HUMAN | YFSRCGILAVWDEHNQ |
||
78 | Y | G | b | 5.7 | 1vg8_D | hetero PDZD8_HUMAN | YIMFLSCATGWDHV |
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79 | R | T | e | 58.1 | 1vg8_D | hetero RAE1_RAT RILP_HUMAN G0SGS3_CHATD WDR91_HUMAN RUBIC_HUMAN PDZD8_HUMAN | RKEPSIQTAGNHVLMY |
||
80 | G | T | e | 69.0 | 1vg8_D | hetero RILP_HUMAN G0SGS3_CHATD WDR91_HUMAN PDZD8_HUMAN | GDNQSWTAKRVEHLCFIMY |
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81 | A | b | 4.5 | 1vg8_D | hetero WDR91_HUMAN PDZD8_HUMAN | ATGSVCIFLPQR |
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82 | D | b | 7.4 | 1vg8_D | hetero RILP_HUMAN G0SGS3_CHATD WDR91_HUMAN PDZD8_HUMAN | DNHQEVSALMIKRTY |
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83 | C | E | b | 0.0 | 1vg8_D | GAVCILRFHMTY |
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84 | C | E | b | 0.0 | 1vg8_D | VFAIYCLHGT |
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85 | V | E | b | 0.0 | 1vg8_D | LIVMCFGAT |
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86 | L | E | b | 0.0 | 1vg8_D | LIVFYCMAGHN |
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87 | V | E | b | 0.7 | 1vg8_D | VCMILATFGSY |
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88 | F | E | b | 0.0 | 1vg8_D | YFVIHLQ |
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89 | D | E | b | 8.0 | 1vg8_D | DSANEGIV |
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90 | V | T | b | 0.0 | 1vg8_D | IVLSAGCMNPTY |
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91 | T | T | b | 19.5 | 1vg8_D | TDSANVEHICGQKLM |
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92 | A | e | 25.0 | 1vg8_D | SDNRAKETCQVGHILM |
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93 | P | H | e | 22.5 | 1vg8_D | RPEKQTAGLSHMVYCDFIN |
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94 | N | H | e | 75.2 | 1vg8_D | hetero OSBL1_MOUSE | EDSKQANGRITVHLPW |
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95 | T | H | b | 10.4 | 1vg8_D | STRADNEGHKMP |
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96 | F | H | b | 6.7 | 1vg8_D | hetero OSBL1_MOUSE | FLYIRVESTACKMQ |
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97 | K | H | e | 67.0 | 1vg8_D | hetero OSBL1_MOUSE | EDQKNLSARTHIGMPVY |
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98 | T | T | e | 26.0 | 1vg8_D | hetero OSBL1_MOUSE PDZD8_HUMAN precipitant | NSEAKRHDLVPTGIQYCFM |
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99 | L | H | b | 0.0 | 1vg8_D | VLIAMCSTDFHK |
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100 | D | H | e | 35.2 | 1vg8_D | metal CL | KEDSQAPRTNGHILYMV |
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101 | S | H | e | 63.3 | 1vg8_D | hetero OSBL1_HUMAN RUBIC_HUMAN PDZD8_HUMAN precipitant | KSNERTAQIDHLGPFMVY |
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102 | W | H | b | 8.0 | 1vg8_D | hetero OSBL1_HUMAN PDZD8_HUMAN precipitant | WLAFYIEKSVCGMQ |
||
103 | R | H | b | 7.1 | 1vg8_D | hetero OSBL1_HUMAN | RLIKYHVEAMSFPQTWDGN |
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104 | D | H | e | 46.3 | 1vg8_D | hetero OSBL1_HUMAN RUBIC_HUMAN | EDKQPNSRATGIHLVFMY |
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105 | E | H | e | 31.2 | 1vg8_D | hetero OSBL1_HUMAN RUBIC_HUMAN PDZD8_HUMAN metal YT3 precipitant | EQDKNTLRAPSCGHIMV |
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106 | F | H | b | 0.0 | 1vg8_D | hetero PDZD8_HUMAN | LIFVAYEMWHKSTCDGNPQR |
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107 | L | H | b | 15.7 | 1vg8_D | hetero OSBL1_HUMAN | LIRVKQADEHFSCMNTYGPW |
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108 | I | H | e | 67.3 | 1vg8_D | hetero RAE1_RAT OSBL1_HUMAN RUBIC_HUMAN | LRIKASVQDETNPGHYCFM |
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109 | Q | H | e | 30.1 | 1vg8_D | hetero RUBIC_HUMAN PDZD8_HUMAN | HQKELRYNSTVIMADFGPCW |
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110 | A | H | b | 8.9 | 1vg8_D | ALVRSTCDFGIKENHPQYW |
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111 | S | e | 68.8 | 1vg8_D | hetero RAE1_RAT OSBL1_HUMAN WDR91_HUMAN RUBIC_HUMAN | RSAGKDNTELHCPVFIQYM |
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112 | P | b | 17.8 | 1vg8_D | hetero OSBL1_HUMAN | PVASGETHKLDINQRCFYMW |
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113 | R | S | e | 48.2 | 1vg8_D | hetero OSBL1_HUMAN WDR91_HUMAN RAE1_RAT | RKELSAGHDNPQYFITVCM |
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114 | D | S | e | 43.2 | 1vg8_D | DGENLVASTQRCHIPFKYM |
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115 | P | G | e | 38.0 | 1vg8_D | hetero OSBL1_HUMAN | PLAKSGTNCDEIHQRVMFWY |
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116 | E | G | e | 51.8 | 1vg8_D | hetero OSBL1_HUMAN metal YT3 | EDKSAQPRTVGHLNIYCFM |
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117 | N | G | e | 59.4 | 1vg8_D | NGDSEKRTAHPLQCIVY |
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118 | F | S | b | 3.3 | 1vg8_D | precipitant | VILAFTMYCSEGQ |
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119 | P | b | 14.0 | 1vg8_D | PVIATKLNQSCEGHMR |
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120 | F | E | b | 1.4 | 1vg8_D | precipitant | IVLFMKARTYCGNSW |
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121 | V | E | b | 0.0 | 1vg8_D | VILMATCFGY |
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122 | V | E | b | 0.7 | 1vg8_D | LVIMAG |
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123 | L | E | b | 1.1 | 1vg8_D | VLIACFTM |
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124 | G | E | b | 0.0 | 1vg8_D | GARIQFPSV |
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125 | N | E | b | 2.4 | 1vg8_D | compound GTP GNP GDP 2UK 2UH 2UJ | NTCLDHS |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | |
126 | K | e | 28.8 | 1vg8_D | compound GTP GNP GDP 2UK 2UH 2UJ | KQRHNY |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | ||
127 | I | T | e | 27.5 | 1vg8_D | CSIAVLQTKMRDFGNY |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | ||
128 | D | T | e | 23.5 | 1vg8_D | compound GTP GNP GDP 2UK 2UH 2UJ | DASEHQT |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | |
129 | L | S | e | 44.4 | 1vg8_D | compound GTP GNP GDP | LMIVKARCDEFHPQST |
L->F:(1.0 %):LP/P Charcot-Marie-Tooth disease, axonal, 2B (CMT2B) dbSNP:rs1219090 [MIM:600882] | |
130 | E | S | e | 96.0 | 1vg8_D | ERDSAKPQTGHLNVCIMY |
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131 | N | e | 83.0 | 1vg8_D | DNSEHKGTAQRFILMPVY |
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132 | R | e | 34.4 | 1vg8_D | REKDQSGYAHLNTVIMP |
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133 | Q | e | 63.8 | 1vg8_D | QREKVADLPSMNTCGHI |
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134 | V | S | b | 0.0 | 1vg8_D | VIAELQTDGKFNPRS |
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135 | A | e | 49.1 | 1vg8_D | SVDTPAGIKLQECFNRY |
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136 | T | H | e | 42.9 | 1vg8_D | TSDEKIPVALFRYMNQGHW |
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137 | K | H | e | 84.9 | 1vg8_D | EKDSAQNRTHIPYFGLV |
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138 | R | H | e | 38.3 | 1vg8_D | hetero OSBL1_MOUSE | ERQKDTAILMNVFGHPSWY |
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139 | A | H | b | 0.0 | 1vg8_D | AGEILVDQSTMHKNPRY |
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140 | Q | H | e | 39.3 | 1vg8_D | QEKGRALDNHSCFIMPTVY |
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141 | A | H | e | 54.5 | 1vg8_D | hetero OSBL1_MOUSE | AEKQLSGDRINVHTFMPY |
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142 | W | H | b | 11.6 | 1vg8_D | hetero OSBL1_MOUSE | LWFYAEKVMQSGIRTCDHNP |
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143 | C | H | b | 0.0 | 1vg8_D | ACLFSVGRIKPTDEMNQY |
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144 | Y | H | e | 67.8 | 1vg8_D | AKLERYDHNSVFGIQTMPC |
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145 | S | H | e | 58.6 | 1vg8_D | SEDKRAQGTNVHLMP |
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146 | K | T | b | 17.9 | 1vg8_D | KEIRLQDHMSAGNVPTYFW |
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147 | N | T | e | 52.1 | 1vg8_D | precipitant | GNLKEFRHDYAMQSTWCIPV |
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148 | N | S | e | 61.8 | 1vg8_D | GNARSDEKFIQTCHLV |
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149 | I | b | 7.0 | 1vg8_D | precipitant | ILCVAMFTRSYKNP |
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150 | P | e | 34.1 | 1vg8_D | precipitant | PKSALGQTCEFHIMRDVYN |
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151 | Y | E | b | 13.0 | 1vg8_D | FYLCHIVWAM |
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152 | F | E | b | 17.2 | 1vg8_D | FILYMVCHTWEGKPQS |
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153 | E | E | b | 17.1 | 1vg8_D | EDSAFQRGHKMNPTVY |
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154 | T | E | b | 0.0 | 1vg8_D | TCIVALSEGMNQ |
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155 | S | B | b | 0.0 | 1vg8_D | compound GTP GNP GDP 2UK 2UH 2UJ | SCNAHILQT |
||
156 | A | T | b | 0.9 | 1vg8_D | compound GTP GNP GDP 2UK 2UH 2UJ | ASVCPGKLT |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | |
157 | K | T | e | 41.0 | 1vg8_D | compound GTP GNP GDP 2UK 2UH 2UJ | KLARTMSEFIQV |
BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" BINDING /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | K->N:(0.0 %):LP/P Charcot-Marie-Tooth disease, axonal, 2B (CMT2B) dbSNP:rs1219090 [MIM:600882] |
158 | E | T | e | 57.8 | 1vg8_D | TEDSLNQAYKCFHIMV |
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159 | A | T | e | 48.2 | 1vg8_D | metal CL precipitant | NGSRAQDKHMCEFL |
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160 | I | B | e | 39.2 | 1vg8_D | metal CL precipitant | IETQLYDFHSKVMARWCNP |
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161 | N | S | e | 35.8 | 1vg8_D | metal CL precipitant | NGSHRTCDEKLQ |
N->T:(2.0 %):LP/P Charcot-Marie-Tooth disease, axonal, 2B (CMT2B) dbSNP:rs1219090 [MIM:600882] | |
162 | V | H | b | 2.0 | 1vg8_D | metal CL precipitant | VILFTAEKMY |
V->M:(1.0 %):LP/P Charcot-Marie-Tooth disease, axonal, 2B (CMT2B) dbSNP:rs1219090 [MIM:600882] | |
163 | E | H | e | 31.2 | 1vg8_D | metal CL precipitant | EDKNQIRTYLVAFGHPS |
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164 | Q | H | e | 44.9 | 1vg8_D | EDKQALNRSITCGHMP |
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165 | A | H | b | 0.0 | 1vg8_D | AVLPISMTCDFGK |
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166 | F | H | b | 0.5 | 1vg8_D | FLAIKMPTVY |
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167 | Q | H | e | 57.1 | 1vg8_D | EQLDRTYHIKNMSFVA |
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168 | T | H | e | 20.1 | 1vg8_D | ETADKSWLRYCGHMNQVFI |
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169 | I | H | b | 0.0 | 1vg8_D | LIAVMTCF |
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170 | A | H | b | 0.9 | 1vg8_D | AVILTSCEFGMQR |
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171 | R | H | e | 35.6 | 1vg8_D | RKEQASCHLDMNT |
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172 | N | H | e | 24.2 | 1vg8_D | EKADNQSVHLTIRCF |
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173 | A | H | b | 0.0 | 1vg8_D | IAVLSHKMCFGTY |
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174 | L | H | b | 10.7 | 1vg8_D | LIRKVFMPESYACNQT |
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175 | K | H | e | 75.9 | 1vg8_D | KQRENTASGLIMPYDFHV |
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176 | Q | H | b | 19.4 | 1vg8_D | QRKNELDSTAHMPYGV |
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177 | E | H | b | 14.1 | 1vg8_D | ERKQSDPHNMFGILVYAT |
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178 | T | H | e | 33.8 | 1vg8_D | hetero RILP_HUMAN | TSGKRAEMNPDQCILVH |
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179 | E | H | e | 29.1 | 1vg8_D | ESKQRLDAGTHPIMNVY |
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180 | V | H | e | 38.7 | 1vg8_D | hetero RILP_HUMAN | VLIQGTDEKNPRSACFMW |
MUTAGEN /note="V->A: Abolishes interaction with RILP and localization to late endosomal/lysosomal compartments." MUTAGEN /note="V->A: Abolishes interaction with RILP and localization to late endosomal/lysosomal compartments." DISORDER predicted by DISOPRED | |
181 | E | H | e | 41.2 | 1vg8_D | hetero RILP_HUMAN | EQDAHKSLNPRTVMFGI |
DISORDER predicted by DISOPRED | |
182 | L | H | e | 42.7 | 1vg8_D | hetero RILP_HUMAN | LIAVEFKTGQRDNSYHMP |
MUTAGEN /note="L->A: Does not abolish interaction with RILP and localization to late endosomal/lysosomal compartments. Does not abolish interaction with RILP and localization to late endosomal/lysosomal compartments; when associated with A- 183." MUTAGEN /note="L->A: Does not abolish interaction with RILP and localization to late endosomal/lysosomal compartments. Does not abolish interaction with RILP and localization to late endosomal/lysosomal compartments; when associated with A- 183." DISORDER predicted by DISOPRED | |
183 | Y | H | e | 29.6 | 1vg8_D | hetero RILP_HUMAN | FYHGLSEVAIKPRWTDNQM |
MUTAGEN /note="Y->A: Does not abolish interaction with RILP and localization to late endosomal/lysosomal compartments. Does not abolish interaction with RILP and localization to late endosomal/lysosomal compartments; when associated with A- 182." MUTAGEN /note="Y->A: Does not abolish interaction with RILP and localization to late endosomal/lysosomal compartments. Does not abolish interaction with RILP and localization to late endosomal/lysosomal compartments; when associated with A- 182." DISORDER predicted by DISOPRED | |
184 | N | H | e | 76.4 | 1vg8_D | NGSADREQPTHIKMVCFL |
DISORDER predicted by DISOPRED | ||
185 | E | H | e | 61.3 | 1vg8_D | hetero RILP_HUMAN | EQKDGLNSAIVHRPTMY |
DISORDER predicted by DISOPRED | |
186 | F | S | e | 67.9 | 1vg8_D | hetero RAE1_RAT | FLSADGIRKNTVQEMPY |
DISORDER predicted by DISOPRED | |
187 | P | e | 59.7 | 1vg8_D | PGSDTKIMNAQVELR |
DISORDER predicted by DISOPRED | |||
188 | E | e | 56.3 | 1vg8_D | EDQSKLNPAGRTIVH |
DISORDER predicted by DISOPRED | |||
189 | P | e | 98.4 | 1vg8_D | hetero RAE1_RAT | PSGTDEAHQRIKNVL |
DISORDER predicted by DISOPRED | ||
190 | I | e | 123.4 | 1vg8_D | hetero RAE1_RAT | IVLGSMPTADEKQRN |
DISORDER predicted by DISOPRED | ||
191 | K | e | 77.8 | 1vg0_B | hetero RAE1_RAT | KRSDEQAGLNTHIVP |
CROSSLNK /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)" CROSSLNK /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)" DISORDER predicted by DISOPRED | ||
192 | L | e | 123.0 | 1vg0_B | hetero RAE1_RAT | LIVKPSMFREQDT |
DISORDER predicted by DISOPRED | ||
193 | D | - | - | - | - | DSNEGTKRVIAPYHQ |
DISORDER predicted by DISOPRED | ||
194 | K | - | - | - | - | KSLNTIPRAEFGQCDVYH |
CROSSLNK /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)" CROSSLNK /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)" DISORDER predicted by DISOPRED | ||
195 | N | - | - | - | - | NGSHTKQAEPRDLIV |
DISORDER predicted by DISOPRED | ||
196 | D | - | - | - | - | DNPQSTAERGLKHW |
DISORDER predicted by DISOPRED | ||
197 | R | - | - | - | - | RKQESGPITLVAYDMN |
DISORDER predicted by DISOPRED | ||
198 | A | - | - | - | - | ASKPGQHETVILMRN |
DISORDER predicted by DISOPRED | ||
199 | K | - | - | - | - | KQRSANTEGLPDFMV |
DISORDER predicted by DISOPRED | ||
200 | A | - | - | - | - | SAGTKPRNQDCEHLV |
DISORDER predicted by DISOPRED | ||
201 | S | - | - | - | - | SAQTNEGKPMDLRWYCV |
DISORDER predicted by DISOPRED | ||
202 | A | - | - | - | - | AGSKVEFCLPQTDIN |
DISORDER predicted by DISOPRED | ||
203 | E | - | - | - | - | SGEQKADNRCFYMPTVIL |
DISORDER predicted by DISOPRED | ||
204 | S | - | - | - | - | SGCKNATEHRQVP |
DISORDER predicted by DISOPRED | ||
205 | C | - | - | - | - | CSAIKGTV |
LIPID /note="S-geranylgeranyl cysteine" LIPID /note="S-geranylgeranyl cysteine" DISORDER predicted by DISOPRED | ||
206 | S | - | - | - | - | SGAHCENQTVYIKP |
DISORDER predicted by DISOPRED | ||
207 | C | - | - | - | - | C |
MOD_RES /note="Cysteine methyl ester" LIPID /note="S-geranylgeranyl cysteine" MOD_RES /note="Cysteine methyl ester" LIPID /note="S-geranylgeranyl cysteine" DISORDER predicted by DISOPRED |