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Contact Molecules for Homologous Proteins

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Sites by Variants[60 %]


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[SupCon3D]
[help] 		seq_id(%): [0] [30] [40] [50] [60] [70] [80] [90] [95] [100]
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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
30831 313 10 O43765(SGTA_HUMAN) RecName: Full=Small glutamine-rich tetratricopeptide repeat-containing protein alpha;AltName: Full=Alpha-SGT;AltName: Full=Vpu-binding protein; Short=UBP;
QUERYSEQ 
MDNKKRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLPEIFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCER
AICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREAPSPTGGVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMISGGNNPLGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIR
SRTPSASNDDQQE
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

Statistics of sites in view of Disease classification

All
Number of sites 313
Buired or ExposedBuried 33.0 (%) [64]
Exposed 67.0 (%) [130]
Ave relacc 36.7 %
SD relacc 27.60 %
Contact Molhetero 0.0 (%) [0]
nucleotide 0.0 (%) [0]
compound 0.0 (%) [0]
metal 0.6 (%) [2]
otherpoly 0.0 (%) [0]
homo 8.9 (%) [28]
precipitant 4.5 (%) [14]
Number of variants 0
N_Freq(AAvariant)==0 %
N_Freq(AAvariant)>0 %
Ave Freq(AAvariant)
SD Freq(AAvariant)