Contact Molecules for Homologous Proteins


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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
8698 39 0 Q7TFA0(NS8A_SARS) RecName: Full=ORF8a protein;AltName: Full=Accessory protein 8a;AltName: Full=Protein non-structural 8a; Short=ns8a;Flags: Precursor;
QUERYSEQ
MKLLIVLTCISLCSCICTVVQRCASNKPHVLEDPCKVQH
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]
  [n]:site number of query sequence.  [a]:amino acid of query sequence.  [s]:predicted secondary structure.
  [e]:predicted exposed/buried.  [acc]:predicted relative accesssibility(%).  [pdb]:PDB code of homologous structure.
  [contact_mols]:predicted binding molecules  [observed aa]:Observed amino acids among homologous sequences.  [feature table]:UniProt Feature Table
  [variant]:UniProt Human Variant.
n a s e acc pdb contact_mols observed aa feature table variant
1M----
SIGNAL DISORDER predicted by DISOPRED SIGNAL
2K----
SIGNAL SIGNAL
3L----
SIGNAL SIGNAL
4L----
SIGNAL SIGNAL
5I----
SIGNAL SIGNAL
6V----
SIGNAL SIGNAL
7L----
SIGNAL SIGNAL
8T----
SIGNAL SIGNAL
9C----
SIGNAL SIGNAL
10I----
SIGNAL SIGNAL
11S----
SIGNAL SIGNAL
12L----
SIGNAL SIGNAL
13C----
SIGNAL SIGNAL
14S----
SIGNAL SIGNAL
15C----
SIGNAL SIGNAL
16I----
17C----
18T----
19V----
20V----
21Q----
22R----
23C----
24A----
25S----
26N----
27K----
28P----
29H----
30V----
31L----
32E----
33D----
34P----
35C----
36K----
37V----
38Q----
39H----