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Contact Molecules for Homologous Proteins


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Sites by Variants[95 %]


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seq_id(%): [0] [30] [40] [50] [60] [70] [80] [90] [95] [100]
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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
2908540 258 14 O95721(SNP29_HUMAN) RecName: Full=Synaptosomal-associated protein 29 ; Short=SNAP-29 ;AltName: Full=Soluble 29 kDa NSF attachment protein ;AltName: Full=Vesicle-membrane fusion protein SNAP-29;
QUERYSEQ
MSAYPKSYNPFDDDGEDEGARPAPWRDARDLPDGPDAPADRQQYLRQEVLRRAEATAASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKMDQDLKISQKHINSIKSVFGGLVNYFKSKPVETPPEQNGTLTSQPNNRLKEAI
STSKEQEAKYQASHPNLRKLDDTDPVPRGAGSAMSTDAYPKNPHLRAYHQKIDSNLDELSMGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTERKVRQL
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

Statistics of sites in view of Disease classification

All
Number of sites 258
Buired or ExposedBuried 1.4 (%) [2]
Exposed 98.6 (%) [144]
Ave relacc 56.2 %
SD relacc 14.46 %
Contact Molhetero 39.1 (%) [101]
nucleotide 0.0 (%) [0]
compound 0.0 (%) [0]
metal 0.0 (%) [0]
otherpoly 0.0 (%) [0]
homo 0.0 (%) [0]
precipitant 0.0 (%) [0]
Number of variants 0
N_Freq(AAvariant)==0 %
N_Freq(AAvariant)>0 %
Ave Freq(AAvariant)
SD Freq(AAvariant)