Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
2634797 | 165 | 1500 | P05161(ISG15_HUMAN) | RecName: Full=Ubiquitin-like protein ISG15;AltName: Full=Interferon-induced 15 kDa protein;AltName: Full=Interferon-induced 17 kDa protein; Short=IP17;AltName: Full=Ubiquitin cross-reactive protein; Short=hUCRP;Flags: Precursor; |
QUERYSEQ |
MGWDLTVKMLAGNEFQVSLSSSMSVSELKAQITQKIGVHAFQQRLAVHPSGVALQDRVPLASQGLGPGSTVLLVVDKCDEPLSILVRNNKGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEYGLKPLSTVFM NLRLRGGGTEPGGRS |
All | LB/B (likely benign or benign) | ||
Number of sites | 165 | 1 | |
Buired or Exposed | Buried | 32.9 (%) [52] | 0.0 (%) [0] |
Exposed | 67.1 (%) [106] | 100.0 (%) [1] | |
Ave relacc | 37.6 % | 40.6 % | |
SD relacc | 29.27 % | 0.00 % | |
Contact Mol | hetero | 80.0 (%) [132] | 100.0 (%) [1] |
nucleotide | 9.7 (%) [16] | 0.0 (%) [0] | |
compound | 32.7 (%) [54] | 0.0 (%) [0] | |
metal | 41.8 (%) [69] | 100.0 (%) [1] | |
otherpoly | 21.8 (%) [36] | 0.0 (%) [0] | |
homo | 55.2 (%) [91] | 100.0 (%) [1] | |
precipitant | 63.0 (%) [104] | 100.0 (%) [1] | |
Number of variants | 1 | 1 | |
N_Freq(AAvariant)==0 % | 0.0 % [0] | ||
N_Freq(AAvariant)>0 % | 100.0 % [1] | ||
Ave Freq(AAvariant) | 5.0 % | ||
SD Freq(AAvariant) | 0.00 % |
1 sites | 83 |
[n]:site number of query sequence. [a]:amino acid of query sequence. [s]:predicted secondary structure. [e]:predicted exposed/buried. [acc]:predicted relative accesssibility(%). [pdb]:PDB code of homologous structure. [contact_mols]:predicted binding molecules [observed aa]:Observed amino acids among homologous sequences. [feature table]:UniProt Feature Table [variant]:UniProt Human Variant.
n | a | s | e | acc | pdb | contact_mols | observed aa | feature table | variant |
83 | S | E | e | 40.6 | 7rbs_B | hetero UBP7_HUMAN F105B_HUMAN UBP30_HUMAN UBP14_HUMAN E7FEV5_DANRE NEMO_MOUSE UBP2_HUMAN UBP21_HUMAN UBP8_YEAST HOIL1_MOUSE UBP46_HUMAN TNIP1_MOUSE UBP1_HUMAN TNIP1_HUMAN NEMO_HUMAN Q5ZTB4_LEGPH UBP34_HUMAN UBP5_HUMAN RNF31_HUMAN UBP6_YEAST UBP18_MOUSE TNIP2_HUMAN UBP35_HUMAN OPTN_MOUSE Q5ZSI8_LEGPH A0A6A5PXS0_YEASX UBP36_HUMAN ADRM1_HUMAN Q22240_CAEEL Q5ZSJ1_LEGPH NOD1_HUMAN A0A0R4ILB8_DANRE UBP12_HUMAN OTUL_HUMAN UBB_HUMAN E0W1I1_PEDHC B9G207_ORYSJ PRKN_HUMAN C4QY61_KOMPG Q6IB93_HUMAN metal ZN CD CL NA homo precipitant | QSFMN |
MUTAGEN /note="S->A: Does not affect ISG15 signaling, interaction with ITGAL or activation of SRC family tyrosine kinases." DOMAIN /note="Ubiquitin-like 2" MUTAGEN /note="S->A: Does not affect ISG15 signaling, interaction with ITGAL or activation of SRC family tyrosine kinases." DOMAIN /note="Ubiquitin-like 2" | S->N:(5.0 %):LB/B - dbSNP:rs1921 |