Summary for the 553-rd Site(E) |
PID | QueryLength | FocusSite | TITLE |
26866 | 740 | 553 E | RecName: Full=ATP-dependent RNA helicase DDX1; EC=3.6.4.13 ;AltName: Full=DEAD box protein 1;AltName: Full=DEAD box protein retinoblastoma; Short=DBP-RB; |
AC/ID | AC:Q92499 ID:DDX1_HUMAN |
Feature Table for 553-th site |
HELIX: REGION: /note="Necessary for interaction with replicase polyprotein 1ab nsp14 of IBV" DOMAIN: /note="Helicase C-terminal" REGION: /note="Necessary for interaction with HNRNPK" CHAIN: /note="ATP-dependent RNA helicase DDX1" /id="PRO_0000054986" |
Percentages of Amino Acids in Homologous Proteins [show alignment] |
E:28% A:13% Q:13% D:11% K:7% S:6% R:3% G:3% V:3% N:2% H:2% I:2% T:2% L:1% M:1% P:1% Y:1% |
Template For Monomer | predicted SecStr | predicted ExpBur | Predicted Relative Acc(%) |
8tbx | H (alpha-helix) | e (exposed) | 29.1 |
Predicted Bind Molecules |
hetero:12 homo:14 nucleotide:5 compound:2 precipitant:4 |
Templates for 3D complexes |
hetero [20340:OSKA_DROME ] 5nt7_A_1_B_1 5nt7_D_1_C_1 [33045:RL23_HUMAN ] 8fkt_AA_1_N_1 8fku_BA_1_N_1 8fkv_CA_1_N_1 8fkw_DA_1_N_1 8fkx_DA_1_N_1 8fky_IA_1_P_1 [35555:G0SI44_CHATD ] 8i9t_Y_1_PA_1 8i9v_AA_1_QA_1 8i9w_Z_1_QA_1 8i9x_AA_1_TA_1 homo [81688:IF4A_YEAST ] 2vsx_A_1_B_1 2vsx_B_1_A_1 [43234:DDX6_HUMAN ] 6f9s_A_1_A_2 6f9s_A_2_A_1 [83656:DDX3X_HUMAN ] 7liu_A_1_B_1 7liu_B_1_A_1 [87062:DBPA_ECOLI ] 7pli_A_1_C_1 7pli_C_1_A_1 [92261:DBP2_YEAST ] 8arp_A_1_D_1 8arp_B_1_E_1 8arp_C_1_F_1 8arp_D_1_A_1 8arp_E_1_B_1 8arp_F_1_C_1 nucleotide 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] 6yxx_Q_1_L_1 [auuuuaccaauuaagaagaauauuauaauaaugggugucuuauauuuuaaauaaauauuuaaauuccguguaguaaauuuauuauuuguauuauuuauauaauagguguauuauauuuaaauuuuaaauuuguuguuuuauauuuagauacauauuuauagauuaauauauuuaaauaauauuuuaaaauuuauugaacuguaauguuacaguuguauguaccaaauaaauauaguaagauuauuuuaguugaauuaauaaauaaauauuuauuuuucuuuguaaauauuaugaacaauuuaauuaacuaaaauguuugaauauuuauuuuuauauuuuuaguagguaaaugaaaaguauaaauggauauaacuuaauauuuaauauuuguuuaaugaaaaguauuuuauauuguauaguauuauuauaguguauaguuuuuuaaaaauauaguuaaauaaaguaugaauuaauaucaaaauuuuaauaaaaauuaaaaaauuaaaauagggcaaguccuacucuccuuuacaaagagaacauuauauguaauuguauguuugauuggggcaauacuauauuuauuuauauagcauaagaacuauauucuuugaaauuauaaaaggagcagguuaacaagcauguguuucaucgucucguuguaaagcagauuuguauauuuaauuuuuauaauuaauaauaauuaauauaaguacgcaaggauugauuauugaaaaaagaaagaagaauauaauuua ] 7aoi_NB_1_F_1 [augccugaauagggugaagccagaggaaacucugguggaggcucgcgaauuuggguauaguagcaaauauucaaaugagaacuuugaagacugaaguggggaaagguuccacgucaacagcaguuggacguggguuagucgauccuaagagaugguuucaaaggccugacaggccaccaucgaaagggaauccgguuaagauuccggaaccuggauauggauucuucacgguaacguaacugaauguggagacgucggcgcgagcccugggaggaguuaucuuuucuucuuaacagcuuaucaccccggaauugguuuauccggagauggggucuuauggcuggaagaggccagcaccuuugcuggcuccggugcgcuugugacggcccgugaaaauccacaggaaggaauaguuuucaugccaggucguacugucuccaaggugaacagccucuaguugauagaagauaagggaagucgguccguaacuucgggauaaggauuggcucuaagggucggguagugagggccuuggucacggccuuggcuugcuacaauuaacgaucaacuuagaacugguacggacaaggggaaucugacuguuaacgagauucccacugucccuaucuacuaucuagcgaggcugucugaucaggcauugcguaagcaguagaguagccguuacgaucugcugaga ] 7nad_Z_1_A_1 [augccugaauagggugaagccagaggaaacucugguggaggcucgcgaauuuggguauaguagcaaauauucaaaugagaacuuugaagacugaaguggggaaagguuccacgucaacagcaguuggacguggguuagucgauccuaagagaugguuucaaaggccugauucaggccaccaucgaaagggaauccgguuaagauuccggaaccuggauauggauucuucacgguaacguaacugaauguggagacgucggcgcgagcccugggaggaguuaucuuuucuucuuaacagcuuaucaccccggaauugguuuauccggagauggggucuuauggcuggaagaggccagcaccuuugcuggcuccggugcgcuugugacggcccgugaaaauccacaggaaggaauaguuuucaugccaggucguacugucuccaaggugaacagccucuaguugauagaauccguaacuucgggauaaggauuggcucuaagggucggguagugagggccuuggucacggccuuggcuugcuacaauuaacgaucaacuuagaacugguacggacaauaucuagcgaggcugucugaucaggcauugcguaagcaguagaguagccguuacgaucugcugaga ] 7r72_X_1_A_1 [xxuugaccucggaucagguaggaggacccgcugaacuuaagcauaucaauaagcggaggaaaagaaaccaacagggauugcccuaguaacggcgagugaagcggcaacagcucaaauuugaaagcuggcuucggcccgcguuguaauuuggagaggaugcuuugggcgaggcuccuucugaguucccuggaacgggacgccacagagggugagagccccguauaguuggaagccaagccuguguaaagcuccuucgacgagucgaguaguuugggaaugcugcucaaaaugggagguaaauuucuucuaaagcuaaauaccggccagagaccgauagcgcacaaguagagugaucgaaagaugaaaagcacuuugaaaagaggguuaaauagcacgugaaauuguugaaagggaagcgcuugugaccagacuugcgcccggcggaucauccgguguucucaccggugcacuccgccgggcucaggccagcaucgguucuggcggggggauaaaggcccagggaauguggcuccuccgggaguguuauagcccuggguguaauacccucgccgggaccgaggaccgcgcucugcaaggaugcuggcguaauggucaccagcgacccgucuugaaacacggaccaaggagucaagguuuugcgcgaguguuuggguguaaaacccgcacgcguaxxxxxxxxxxxxxxaggugagagcuucggcgcaucaucgaccgauccugauguauucggauggauuugaguaggagcguuaagccuuggacccgaaagauggugaacuaugcuuggauagggugaagccagaggaaacucugguggaggcucgcxxxxxxxxugacgugcaaxxxgaucgucaaaucugagcaugggggcgaaagacuxxxxxaaccaucuaguagcugguuaccgccgaaguuucccucaggauagcagugucgaccuucaguuuuaugagguaaagcgaaugxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxaacuuuaaauauguaagaagcccuuguuacuuaacugaacgugggcauucgaauguaucgacacuagugggccauuuuugguaagcagaacuggcgaugcgggaugaaccgaacgcgggguuaaggugccggaguggacgcucaucagacaccacaaaaggcguuaguacaucuugacagcaggacgguggccauggaagucggaauccgcuaaggacuguguaacaacucaccugccgaauguacuagcccugaaaauggauggcgcucaagcgucccacccauaccccgcccucaggguagaaacgaugcccugaggaguaggcggccguggaggucagugacgaagccuagggcgugagcccgggucgaacggccucuagugcagaucuuggugguaguagcaaauacuucaaugagaacuugaaggaccgaaguggggaaagguuccaugugaacagcgguuggacauggguuagucgauccuaagccauagggaaguuccguuucaaaggggcacucgugccccguguggcgaaagggaagccgguuaauauuccggcaccuggauguggguuuugcgcggcaacgcaacugaacgcggagacgacggcgggggccccgggcagaguucucuuuucuucuuaacggucuaucacccuggaaacaguuugucuggagauaggguuuaauggccggaagagcccgacacuucugucggguccggugcgcucucgacgucccuugaaaauccgcgggagggaauaauucucacgccaggucguacucauaaccgcagcagguccccaaggugaacagccucugguugauagaacaauguagauaagggaagucggcxxxxxxxxuccguaacuucgggaaaagxxxxggcucuaaggguugggcacguugggcuuugggcggacgcccugggagcagagggccucuagccgggcaaccggccggcggcccucagcacccgggguugaagcccuuagcxxxxxxxxxxxxxccggcgugcgguuaacaaccaacuuagaacugguacggacaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxcacugucccuaucuacuaucuagcgaaaccacagccaagggaacgggcuuggcaaaaucagcggggaaagaagacccuguugagcuugacucuaguuugacauugugaaaagacauaggagguguagaauaggugggagcuucggcgccagugaaauaccacuacuccuauuguuuuuuuacuuauucaaugxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxugaagacauugucagguggggaguuxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxccuuuagucccucgaaauuugaggcuagaggxxxxagaaaaguuaccacagggauaacuggcuuguggcggccaagcguucauagcgacgucgcuxxxxxxxxxxxxgaugucggcucuuccuaucauaccgaagcagaauucgguaagcguuggauuguucacccacuaauagggaxxgugagcugxxxxxxgaccgucgugagacagguuaguxxxxcccuacugaugaacucgucgcaaugguaauucagcuuaguacgagaggaaccgcugauucagauaauugguuuuugcgguuguccgaccgggcagugccgcgaagcuaccaucugcuggauaauggcugaacgccucuaagucagaauccaugccagaacgcgacgauacuacccgcacguuguagacguauaagaauaggcuccggccucguauccuagcaggcgauuccuccgccggccucgaaguggccgucgguaauucgcguauugcaauuuagacacgcgcgggaucaaauccuuugcagacgacuuagaugugcgaaaggguccuguaagcaguagaguagccuuguuguuacgaucugcugaggguaagcccuccuucgccuagauuucxxxx ] 8i9z_Y_1_A_1 compound [KEG ] 5suq_A_1_G_1 5suq_C_1_G_1 precipitant [GOL ] 2way_A_1_E_1 4crw_B_1_G_1 [PO4 ] 6s8s_A_1_G_1 6s8s_C_1_O_1 |
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