|
|
| PID | QueryLength | FocusSite | TITLE |
| 26866 | 740 | 544 C | RecName: Full=ATP-dependent RNA helicase DDX1; EC=3.6.4.13 ;AltName: Full=DEAD box protein 1;AltName: Full=DEAD box protein retinoblastoma; Short=DBP-RB; |
| AC/ID | AC:Q92499 ID:DDX1_HUMAN |
| Feature Table for 544-th site |
STRAND: REGION: /note="Necessary for interaction with replicase polyprotein 1ab nsp14 of IBV" DOMAIN: /note="Helicase C-terminal" REGION: /note="Necessary for interaction with HNRNPK" CHAIN: /note="ATP-dependent RNA helicase DDX1" /id="PRO_0000054986" |
Percentages of Amino Acids in Homologous Proteins
 [show alignment]
|
A:19% S:18% E:7% Y:7% P:6% T:6% R:4% C:4% G:4% L:4% V:4% H:3% I:3% K:3% N:2% D:2% Q:2% M:2% F:2% |
| Template For Monomer | predicted SecStr | predicted ExpBur | Predicted Relative Acc(%) |
 8tbx |
E (beta-strand) | b (buried) | 0.0 |
| Predicted Bind Molecules |
| hetero:10 homo:2 nucleotide:5 precipitant:2 |
| Templates for 3D complexes |
|
hetero [19118:PAT1_YEAST
] 4brw_A_1_B_1 [20340:OSKA_DROME
] 5nt7_A_1_B_1 5nt7_D_1_C_1 [33045:RL23_HUMAN
] 8fkt_AA_1_N_1 8fkx_DA_1_N_1 8fky_IA_1_P_1 [35555:G0SI44_CHATD
] 8i9t_Y_1_PA_1 8i9v_AA_1_QA_1 8i9w_Z_1_QA_1 8i9x_AA_1_TA_1
homo [43234:DDX6_HUMAN
] 6f9s_A_1_A_2 6f9s_A_2_A_1
nucleotide [auuuuaccaauuaagaagaauauuauaauaaugggugucuuauauuuuaaauaaauauuuaaauuccguguaguaaauuuauuauuuguauuauuuauauaauagguguauuauauuuaaauuuuaaauuuguuguuuuauauuuagauacauauuuauagauuaauauauuuaaauaauauuuuaaaauuuauugaacuguaauguuacaguuguauguaccaaauaaauauaguaagauuauuuuaguugaauuaauaaauaaauauuuauuuuucuuuguaaauauuaugaacaauuuaauuaacuaaaauguuugaauauuuauuuuuauauuuuuaguagguaaaugaaaaguauaaauggauauaacuuaauauuuaauauuuguuuaaugaaaaguauuuuauauuguauaguauuauuauaguguauaguuuuuuaaaaauauaguuaaauaaaguaugaauuaauaucaaaauuuuaauaaaaauuaaaaaauuaaaauagggcaaguccuacucuccuuuacaaagagaacauuauauguaauuguauguuugauuggggcaauacuauauuuauuuauauagcauaagaacuauauucuuugaaauuauaaaaggagcagguuaacaagcauguguuucaucgucucguuguaaagcagauuuguauauuuaauuuuuauaauuaauaauaauuaauauaaguacgcaaggauugauuauugaaaaaagaaagaagaauauaauuua ] 7aoi_NB_1_F_1 [guuugaccucaaaucagguaggaguacccgcugaacuuaagcauaucaauaagcggaggaaaagaaaccaaccgggauugccuuaguaacggcgagugaagcggcaaaagcucaaauuugaaaucugguaccuucggugcccgaguuguaauuuggagagggcaacuuuggggccguuccuugucuauguuccuuggaacaggacgucauagagggugagaaucccguguggcgaggagugcgguucuuuguaaagugccuucgaagagucgaguuguuugggaaugcagcucuaagugggugguxxxxuccaucuaaagcuaaauauuggcgagagaccgauagcgaacaaguacagugauggaaagaugaaaagaacuuugaaaagagagugaaaaaguacgugaaauuguugaaagggaagggcauuugaucagacaugguguuuugugcccucugcuccuuguggguaggggaaucucgcauuucacugggccagcaucaguuuugguggcaggauaaauccauaggaauguagcuugccucgguaaguauuauagccugugggaauacugccagcugggacugaggacugcgacguaagucaaggaugcuggcauaaugguuauaugccgcccgucuugaaacacggaccaaggagucuaacgucuaugcgaguguuuggguguaaaacccauacgcguaaugaaagugaacguagguuggggccucgcaagaggugcacaaucgaccgauccugaxxxxxxxggauggauuugaguaagagcauagcuguugggacccgaaagauggugaacuaugccugaauagggugaagccagaggaaacucugguggaggcucgxxxxgcgguxxxxxxxxxxxxcgaucgucgaauuuggguauaggggcgaaagacxxxxxxaaccaucuaguagcugguuccugccgaaguuucccucaggauagcagaagcucguaucaguuuuaugaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxauguaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgaaugaagagcuuuuagugggccauuuuugguaagcagaacuggcgaugcgggaugaaccgaacguagaguuaaggugccggaauacacgcucaucagacaccacaaaagguguuaguucaucuagacagccggacgguggccauggaagucggaauccgcuaaggaguguguaacaacucaccggccgaaugaacuagcccugaaaauggauggcgcucaagcguguuaccuauacucuaccgucaggguugauaugaugcccugacgaguaggcaggcguggaggucagugacgaagccuagaccguaaggucgggucgaacggccucuagugcagaucuuggugguaguagcaaauauucaaaugagaacuuugaagacugaaguggggaaagguuccacgucaacagcaguuggacguggguuagucgauccuaagagauggggaagcuccguuucaaaggccugauuuuaugcaggccaccaucgaaagggaauccgguuaagauuccggaaccuggauauggauucuucacgguaacguaacugaauguggagacgucggcgcgagcccugggaggaguuaucuuuucuucuuaacagcuuaucaccccggaauugguuuauccggagauggggucuuauggcuggaagaggccagcaccuuugcuggcuccggugcgcuugugacggcccgugaaaauccacaggaaggaauaguuuucaugccaggucguacuxxxxxxxxxxxxxxxucuccaaggugaacagccucuaguugauagaauaauguagauaagggaagucggxxxxxxxxxuccguaacuucgggauaaggauuggcucuaagggucggguagugagggccuuggucaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxcggccuuggxxxxxxxxxxxxxxxxxxxxxcuugcuacaauuaacgaucaacuuagaacugguacggacaaggggaaucugacugxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxuuaacgagauucccacugucccuaucuacuaucuagcgaaaccacagccaagggaacgggcuuggcagaaucagcggggaxxxxxxacccuguugagcuugacucuaguuugacauugugaagagacauagaggguguagaauaagugggagcuucggcgccagugaaauaccacuaccuuuauaguuucuuuacuxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxauugucagguggggaguxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxaaaguuaccacagggauaacuggcuuguggcagucaagcguucauagcgacauugcuxxxxxxxxxxxxxxxxxcggcucuuccuaucauaccgaagcagaauucgguaagcguuggauXXXucacccacuaauagggaacgugXgcuggguuuagaccgucgugagacagguuaguuuuacccuacugaugaauguuaccgcaauaguaauugaacuuaguacgagaggaacaguucauucggauaauugguuuuugcggcugucugaucaggcauugccgcgaagcuaccauccgcuggauuauggcugaacgccucuaagucagaauccaugcuagaacgcggugauuucuuugcuccacacaauauagauggauacgaauaaggcguccuuguggcgucgcugaaccauagcaggcuagcaacggugcacuuggcggaaaggccuugggugcuugcuggcgaauugcaaugucauuuugcguggggauaaaucauuuguauacgacuuagauguacaacgggguauuguaagcaguagaguagccxxxxxguuacgaucugcugagauuaagccuuuguugucugauuuguxxxxxxxxxxxxxxxx ] 7nac_FB_1_A_1 [augccugaauagggugaagccagaggaaacucugguggaggcucgcgaauuuggguauaguagcaaauauucaaaugagaacuuugaagacugaaguggggaaagguuccacgucaacagcaguuggacguggguuagucgauccuaagagaugguuucaaaggccugacaggccaccaucgaaagggaauccgguuaagauuccggaaccuggauauggauucuucacgguaacguaacugaauguggagacgucggcgcgagcccugggaggaguuaucuuuucuucuuaacagcuuaucaccccggaauugguuuauccggagauggggucuuauggcuggaagaggccagcaccuuugcuggcuccggugcgcuugugacggcccgugaaaauccacaggaaggaauaguuuucaugccaggucguacugucuccaaggugaacagccucuaguugauagaagauaagggaagucgguccguaacuucgggauaaggauuggcucuaagggucggguagugagggccuuggucacggccuuggcuugcuacaauuaacgaucaacuuagaacugguacggacaaggggaaucugacuguuaacgagauucccacugucccuaucuacuaucuagcgaggcugucugaucaggcauugcguaagcaguagaguagccguuacgaucugcugaga ] 7nad_Z_1_A_1 [augccugaauagggugaagccagaggaaacucugguggaggcucgcgaauuuggguauaguagcaaauauucaaaugagaacuuugaagacugaaguggggaaagguuccacgucaacagcaguuggacguggguuagucgauccuaagagaugguuucaaaggccugauucaggccaccaucgaaagggaauccgguuaagauuccggaaccuggauauggauucuucacgguaacguaacugaauguggagacgucggcgcgagcccugggaggaguuaucuuuucuucuuaacagcuuaucaccccggaauugguuuauccggagauggggucuuauggcuggaagaggccagcaccuuugcuggcuccggugcgcuugugacggcccgugaaaauccacaggaaggaauaguuuucaugccaggucguacugucuccaaggugaacagccucuaguugauagaauccguaacuucgggauaaggauuggcucuaagggucggguagugagggccuuggucacggccuuggcuugcuacaauuaacgaucaacuuagaacugguacggacaauaucuagcgaggcugucugaucaggcauugcguaagcaguagaguagccguuacgaucugcugaga ] 7r72_X_1_A_1 [guuugaccucaaaucagguaggaguacccgcugaacuuaagcauaucaauaagcggaggaaaagaaaccaaccgggauugccuuaguaacggcgagugaagcggcaaaagcucaaauuugaaaucugguaccuucggugcccgaguuguaauuuggagagggcaacuuuggggccguuccuugucuauguuccuuggaacaggacgucauagagggugagaaucccguguggcgaggagugcgguucuuuguaaagugccuucgaagagucgaguuguuugggaaugcagcucuaagugggugguxxxxuccaucuaaagcuaaauauuggcgagagaccgauagcgaacaaguacagugauggaaagaugaaaagaacuuugaaaagagagugaaaaaguacgugaaauuguugaaagggaagggcauuugaucagacaugguguuuugugcccucugcuccuuguggguaggggaaucucgcauuucacugggccagcaucaguuuugguggcaggauaaauccauaggaauguagcuugccucgguaaguauuauagccugugggaauacugccagcugggacugaggacugcgacguaagucaaggaugcuggcauaaugguuauaugccgcccgucuugaaacacggaccaaggagucuaacgucuaugcgaguguuuggguguaaaacccauacgcguaaugaaagugaacguagguuggggccucgcaagaggugcacaaucgaccgauccugaxxxxxxxggauggauuugaguaagagcauagcuguugggacccgaaagauggugaacuaugccugaauagggugaagccagaggaaacucugguggaggcucgxxxxgcgguxxxxxxxxxxxxcgaucgucgaauuuggguauaggggcgaaagacxxxxxxaaccaucuaguagcugguuccugccgaaguuucccucaggauagcagaagcucguaucaguuuuaugaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxauguaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgaaugaagagcuuuuagugggccauuuuugguaagcagaacuggcgaugcgggaugaaccgaacguagaguuaaggugccggaauacacgcucaucagacaccacaaaagguguuaguucaucuagacagccggacgguggccauggaagucggaauccgcuaaggaguguguaacaacucaccggccgaaugaacuagcccugaaaauggauggcgcucaagcguguuaccuauacucuaccgucaggguugauaugaugcccugacgaguaggcaggcguggaggucagugacgaagccuagaccguaaggucgggucgaacggccucuagugcagaucuuggugguaguagcaaauauucaaaugagaacuuugaagacugaaguggggaaagguuccacgucaacagcaguuggacguggguuagucgauccuaagagauggggaagcuccguuucaaaggccugauuuuaugcaggccaccaucgaaagggaauccgguuaagauuccggaaccuggauauggauucuucacgguaacguaacugaauguggagacgucggcgcgagcccugggaggaguuaucuuuucuucuuaacagcuuaucaccccggaauugguuuauccggagauggggucuuauggcuggaagaggccagcaccuuugcuggcuccggugcgcuugugacggcccgugaaaauccacaggaaggaauaguuuucaugccaggucguacuxxxxxxxxxxxxxxxucuccaaggugaacagccucuaguugauagaauxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxuccguaacuucgggauaaggauuggcucuaagggucggguagugagggccuuggucaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxcggccuuggxxxxxxxxxxxxxxxxxxxxxcuugcuacaauuaacgaucaacuuagaacugguacggacaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxuaucuagcgaaaccacagccaagggaacgggcuuggcagaaucagcggggaxxxxxxacccuguugagcuugacucuaguuugacauugugaagagacauagaggguguagaauaagugggagcuucggcgccagugaaauaccacuaccuuuauaguuucuuuacuxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxauugucagguggggaguxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxaaaguuaccacagggauaacuggcuuguggcagucaagcguucauagcgacauugcuxxxxxxxxxxxxxxxxxxxxxxxuuccuaucauaccgaagcagaauucgguaagcguuggaxxxxxxxcccacuaauagggaacgxxxxxxxxxxxxxgaccgucgugagacagguuaguuuuacccuacugaugaauguuaccgcaauaguaauugaacuuaguacgagaggaacaguucauucggauaauugguuuuugcggcugucugaucaggcauugccgcgaagcuaccauccgcuggauuauggcugaacgccucuaagucagaauccaugcuagaacgcggugauuucuuugcuccacacaauauagauggauacgaauaaggcguccuuguggcgucgcugaaccauagcaggcuagcaacggugcacuuggcggaaaggccuugggugcuugcuggcgaauugcaaugucauuuugcguggggauaaaucauuuguauacgacuuagauguacaacgggguauuguaagcaguagaguagccxxxxxguuacgaucugcugagauuaagccuuuguugucugauuugu ] 7r7a_EB_1_A_1
precipitant [GOL ] 2way_A_1_E_1 4crw_B_1_G_1
|
 [Back to SiteTable] |
 [Back to Search Page] |
 [Back to Top Page] |
Summary for the 544-th Site(C)