Summary for the 543-rd Site(V) |
PID | QueryLength | FocusSite | TITLE |
26866 | 740 | 543 V | RecName: Full=ATP-dependent RNA helicase DDX1; EC=3.6.4.13 ;AltName: Full=DEAD box protein 1;AltName: Full=DEAD box protein retinoblastoma; Short=DBP-RB; |
AC/ID | AC:Q92499 ID:DDX1_HUMAN |
Feature Table for 543-th site |
STRAND: REGION: /note="Necessary for interaction with replicase polyprotein 1ab nsp14 of IBV" DOMAIN: /note="Helicase C-terminal" REGION: /note="Necessary for interaction with HNRNPK" CHAIN: /note="ATP-dependent RNA helicase DDX1" /id="PRO_0000054986" |
Percentages of Amino Acids in Homologous Proteins [show alignment] |
L:16% I:15% V:11% A:10% S:9% T:7% F:5% G:4% Y:4% R:3% E:3% M:3% P:3% K:2% N:1% D:1% C:1% Q:1% H:1% W:1% |
Template For Monomer | predicted SecStr | predicted ExpBur | Predicted Relative Acc(%) |
8tbx | E (beta-strand) | b (buried) | 0.0 |
Predicted Bind Molecules |
hetero:2 homo:6 nucleotide:4 precipitant:2 |
Templates for 3D complexes |
hetero [20340:OSKA_DROME ] 5nt7_A_1_B_1 5nt7_D_1_C_1 homo [43234:DDX6_HUMAN ] 6f9s_A_1_A_2 6f9s_A_2_A_1 [92261:DBP2_YEAST ] 8arp_A_1_F_1 8arp_C_1_E_1 8arp_E_1_C_1 8arp_F_1_A_1 nucleotide [guuugaccucaaaucagguaggaguacccgcugaacuuaagcauaucaauaagcggaggaaaagaaaccaaccgggauugccuuaguaacggcgagugaagcggcaaaagcucaaauuugaaaucugguaccuucggugcccgaguuguaauuuggagagggcaacuuuggggccguuccuugucuauguuccuuggaacaggacgucauagagggugagaaucccguguggcgaggagugcgguucuuuguaaagugccuucgaagagucgaguuguuugggaaugcagcucuaagugggugguxxxxuccaucuaaagcuaaauauuggcgagagaccgauagcgaacaaguacagugauggaaagaugaaaagaacuuugaaaagagagugaaaaaguacgugaaauuguugaaagggaagggcauuugaucagacaugguguuuugugcccucugcuccuuguggguaggggaaucucgcauuucacugggccagcaucaguuuugguggcaggauaaauccauaggaauguagcuugccucgguaaguauuauagccugugggaauacugccagcugggacugaggacugcgacguaagucaaggaugcuggcauaaugguuauaugccgcccgucuugaaacacggaccaaggagucuaacgucuaugcgaguguuuggguguaaaacccauacgcguaaugaaagugaacguagguuggggccucgcaagaggugcacaaucgaccgauccugaxxxxxxxggauggauuugaguaagagcauagcuguugggacccgaaagauggugaacuaugccugaauagggugaagccagaggaaacucugguggaggcucgxxxxgcgguxxxxxxxxxxxxcgaucgucgaauuuggguauaggggcgaaagacxxxxxxaaccaucuaguagcugguuccugccgaaguuucccucaggauagcagaagcucguaucaguuuuaugaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxauguaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgaaugaagagcuuuuagugggccauuuuugguaagcagaacuggcgaugcgggaugaaccgaacguagaguuaaggugccggaauacacgcucaucagacaccacaaaagguguuaguucaucuagacagccggacgguggccauggaagucggaauccgcuaaggaguguguaacaacucaccggccgaaugaacuagcccugaaaauggauggcgcucaagcguguuaccuauacucuaccgucaggguugauaugaugcccugacgaguaggcaggcguggaggucagugacgaagccuagaccguaaggucgggucgaacggccucuagugcagaucuuggugguaguagcaaauauucaaaugagaacuuugaagacugaaguggggaaagguuccacgucaacagcaguuggacguggguuagucgauccuaagagauggggaagcuccguuucaaaggccugauuuuaugcaggccaccaucgaaagggaauccgguuaagauuccggaaccuggauauggauucuucacgguaacguaacugaauguggagacgucggcgcgagcccugggaggaguuaucuuuucuucuuaacagcuuaucaccccggaauugguuuauccggagauggggucuuauggcuggaagaggccagcaccuuugcuggcuccggugcgcuugugacggcccgugaaaauccacaggaaggaauaguuuucaugccaggucguacuxxxxxxxxxxxxxxxucuccaaggugaacagccucuaguugauagaauaauguagauaagggaagucggxxxxxxxxxuccguaacuucgggauaaggauuggcucuaagggucggguagugagggccuuggucaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxcggccuuggxxxxxxxxxxxxxxxxxxxxxcuugcuacaauuaacgaucaacuuagaacugguacggacaaggggaaucugacugxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxuuaacgagauucccacugucccuaucuacuaucuagcgaaaccacagccaagggaacgggcuuggcagaaucagcggggaxxxxxxacccuguugagcuugacucuaguuugacauugugaagagacauagaggguguagaauaagugggagcuucggcgccagugaaauaccacuaccuuuauaguuucuuuacuxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxauugucagguggggaguxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxaaaguuaccacagggauaacuggcuuguggcagucaagcguucauagcgacauugcuxxxxxxxxxxxxxxxxxcggcucuuccuaucauaccgaagcagaauucgguaagcguuggauXXXucacccacuaauagggaacgugXgcuggguuuagaccgucgugagacagguuaguuuuacccuacugaugaauguuaccgcaauaguaauugaacuuaguacgagaggaacaguucauucggauaauugguuuuugcggcugucugaucaggcauugccgcgaagcuaccauccgcuggauuauggcugaacgccucuaagucagaauccaugcuagaacgcggugauuucuuugcuccacacaauauagauggauacgaauaaggcguccuuguggcgucgcugaaccauagcaggcuagcaacggugcacuuggcggaaaggccuugggugcuugcuggcgaauugcaaugucauuuugcguggggauaaaucauuuguauacgacuuagauguacaacgggguauuguaagcaguagaguagccxxxxxguuacgaucugcugagauuaagccuuuguugucugauuuguxxxxxxxxxxxxxxxx ] 7nac_FB_1_A_1 [augccugaauagggugaagccagaggaaacucugguggaggcucgcgaauuuggguauaguagcaaauauucaaaugagaacuuugaagacugaaguggggaaagguuccacgucaacagcaguuggacguggguuagucgauccuaagagaugguuucaaaggccugacaggccaccaucgaaagggaauccgguuaagauuccggaaccuggauauggauucuucacgguaacguaacugaauguggagacgucggcgcgagcccugggaggaguuaucuuuucuucuuaacagcuuaucaccccggaauugguuuauccggagauggggucuuauggcuggaagaggccagcaccuuugcuggcuccggugcgcuugugacggcccgugaaaauccacaggaaggaauaguuuucaugccaggucguacugucuccaaggugaacagccucuaguugauagaagauaagggaagucgguccguaacuucgggauaaggauuggcucuaagggucggguagugagggccuuggucacggccuuggcuugcuacaauuaacgaucaacuuagaacugguacggacaaggggaaucugacuguuaacgagauucccacugucccuaucuacuaucuagcgaggcugucugaucaggcauugcguaagcaguagaguagccguuacgaucugcugaga ] 7nad_Z_1_A_1 [augccugaauagggugaagccagaggaaacucugguggaggcucgcgaauuuggguauaguagcaaauauucaaaugagaacuuugaagacugaaguggggaaagguuccacgucaacagcaguuggacguggguuagucgauccuaagagaugguuucaaaggccugauucaggccaccaucgaaagggaauccgguuaagauuccggaaccuggauauggauucuucacgguaacguaacugaauguggagacgucggcgcgagcccugggaggaguuaucuuuucuucuuaacagcuuaucaccccggaauugguuuauccggagauggggucuuauggcuggaagaggccagcaccuuugcuggcuccggugcgcuugugacggcccgugaaaauccacaggaaggaauaguuuucaugccaggucguacugucuccaaggugaacagccucuaguugauagaauccguaacuucgggauaaggauuggcucuaagggucggguagugagggccuuggucacggccuuggcuugcuacaauuaacgaucaacuuagaacugguacggacaauaucuagcgaggcugucugaucaggcauugcguaagcaguagaguagccguuacgaucugcugaga ] 7r72_X_1_A_1 [guuugaccucaaaucagguaggaguacccgcugaacuuaagcauaucaauaagcggaggaaaagaaaccaaccgggauugccuuaguaacggcgagugaagcggcaaaagcucaaauuugaaaucugguaccuucggugcccgaguuguaauuuggagagggcaacuuuggggccguuccuugucuauguuccuuggaacaggacgucauagagggugagaaucccguguggcgaggagugcgguucuuuguaaagugccuucgaagagucgaguuguuugggaaugcagcucuaagugggugguxxxxuccaucuaaagcuaaauauuggcgagagaccgauagcgaacaaguacagugauggaaagaugaaaagaacuuugaaaagagagugaaaaaguacgugaaauuguugaaagggaagggcauuugaucagacaugguguuuugugcccucugcuccuuguggguaggggaaucucgcauuucacugggccagcaucaguuuugguggcaggauaaauccauaggaauguagcuugccucgguaaguauuauagccugugggaauacugccagcugggacugaggacugcgacguaagucaaggaugcuggcauaaugguuauaugccgcccgucuugaaacacggaccaaggagucuaacgucuaugcgaguguuuggguguaaaacccauacgcguaaugaaagugaacguagguuggggccucgcaagaggugcacaaucgaccgauccugaxxxxxxxggauggauuugaguaagagcauagcuguugggacccgaaagauggugaacuaugccugaauagggugaagccagaggaaacucugguggaggcucgxxxxgcgguxxxxxxxxxxxxcgaucgucgaauuuggguauaggggcgaaagacxxxxxxaaccaucuaguagcugguuccugccgaaguuucccucaggauagcagaagcucguaucaguuuuaugaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxauguaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgaaugaagagcuuuuagugggccauuuuugguaagcagaacuggcgaugcgggaugaaccgaacguagaguuaaggugccggaauacacgcucaucagacaccacaaaagguguuaguucaucuagacagccggacgguggccauggaagucggaauccgcuaaggaguguguaacaacucaccggccgaaugaacuagcccugaaaauggauggcgcucaagcguguuaccuauacucuaccgucaggguugauaugaugcccugacgaguaggcaggcguggaggucagugacgaagccuagaccguaaggucgggucgaacggccucuagugcagaucuuggugguaguagcaaauauucaaaugagaacuuugaagacugaaguggggaaagguuccacgucaacagcaguuggacguggguuagucgauccuaagagauggggaagcuccguuucaaaggccugauuuuaugcaggccaccaucgaaagggaauccgguuaagauuccggaaccuggauauggauucuucacgguaacguaacugaauguggagacgucggcgcgagcccugggaggaguuaucuuuucuucuuaacagcuuaucaccccggaauugguuuauccggagauggggucuuauggcuggaagaggccagcaccuuugcuggcuccggugcgcuugugacggcccgugaaaauccacaggaaggaauaguuuucaugccaggucguacuxxxxxxxxxxxxxxxucuccaaggugaacagccucuaguugauagaauxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxuccguaacuucgggauaaggauuggcucuaagggucggguagugagggccuuggucaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxcggccuuggxxxxxxxxxxxxxxxxxxxxxcuugcuacaauuaacgaucaacuuagaacugguacggacaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxuaucuagcgaaaccacagccaagggaacgggcuuggcagaaucagcggggaxxxxxxacccuguugagcuugacucuaguuugacauugugaagagacauagaggguguagaauaagugggagcuucggcgccagugaaauaccacuaccuuuauaguuucuuuacuxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxauugucagguggggaguxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxaaaguuaccacagggauaacuggcuuguggcagucaagcguucauagcgacauugcuxxxxxxxxxxxxxxxxxxxxxxxuuccuaucauaccgaagcagaauucgguaagcguuggaxxxxxxxcccacuaauagggaacgxxxxxxxxxxxxxgaccgucgugagacagguuaguuuuacccuacugaugaauguuaccgcaauaguaauugaacuuaguacgagaggaacaguucauucggauaauugguuuuugcggcugucugaucaggcauugccgcgaagcuaccauccgcuggauuauggcugaacgccucuaagucagaauccaugcuagaacgcggugauuucuuugcuccacacaauauagauggauacgaauaaggcguccuuguggcgucgcugaaccauagcaggcuagcaacggugcacuuggcggaaaggccuugggugcuugcuggcgaauugcaaugucauuuugcguggggauaaaucauuuguauacgacuuagauguacaacgggguauuguaagcaguagaguagccxxxxxguuacgaucugcugagauuaagccuuuguugucugauuugu ] 7r7a_EB_1_A_1 precipitant [GOL ] 2way_A_1_E_1 4crw_B_1_G_1 |
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