|
|
| PID | QueryLength | FocusSite | TITLE |
| 26866 | 740 | 334 S | RecName: Full=ATP-dependent RNA helicase DDX1; EC=3.6.4.13 ;AltName: Full=DEAD box protein 1;AltName: Full=DEAD box protein retinoblastoma; Short=DBP-RB; |
| AC/ID | AC:Q92499 ID:DDX1_HUMAN |
| Feature Table for 334-th site |
HELIX: DOMAIN: /note="Helicase ATP-binding" REGION: /note="Interaction with dsRNA" REGION: /note="Necessary for interaction with RELA" CHAIN: /note="ATP-dependent RNA helicase DDX1" /id="PRO_0000054986" |
Percentages of Amino Acids in Homologous Proteins
 [show alignment]
|
R:14% S:13% K:12% E:10% A:8% N:6% T:5% D:4% Q:4% L:4% G:3% I:3% P:3% V:3% Y:2% H:1% M:1% F:1% W:1% |
| Template For Monomer | predicted SecStr | predicted ExpBur | Predicted Relative Acc(%) |
 8tbx |
H (alpha-helix) | e (exposed) | 44.5 |
| Predicted Bind Molecules |
| hetero:19 homo:9 nucleotide:13 precipitant:1 |
| Templates for 3D complexes |
|
hetero [19580:CASC3_HUMAN
] 2hyi_E_1_F_1 2hyi_I_1_J_1 2j0q_A_1_J_1 2j0q_B_1_I_1 2xb2_A_1_I_1 2xb2_K_1_H_1 3ex7_C_1_D_1 3ex7_G_1_H_1 [62866:E9Q238_MOUSE
] 7ddx_B_1_A_1 [23906:RL36_HUMAN
] 8fkp_TA_1_T_1 8fkq_PA_1_U_1 8fkr_XA_1_U_1 8fks_TA_1_V_1 8fkt_YA_1_V_1 8fkw_YA_1_X_1 8fkx_YA_1_X_1 8fky_EB_1_CA_1 [75155:SNR48_HUMAN
] 8y6o_I_1_IA_1 [20434:RUXE_HUMAN
] 8y6o_I_1_OA_1
homo [54145:UAP56_HUMAN
] 1t6n_A_1_B_1 [49791:DDX6_HUMAN
] 1vec_B_2_A_1 [83656:DDX3X_HUMAN
] 7liu_B_1_A_1 [87062:DBPA_ECOLI
] 7pli_A_1_C_1 7pli_C_1_A_1 7pli_E_1_K_1 7pli_G_1_I_1 7pli_I_1_G_1 7pli_K_1_E_1
nucleotide [xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxguguaguaucuguucuuuucaguguaacaacugaaaugaccucxxxgaggcucauxxxxxxxxxxxxxxxxxxxxxacacauuuuuuggcaxxxxxxxxxxxxxxxxggacgggaagagxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgagacgucgcgacccucgcaxxxxxxgagucguucuugacuuxxxxxxxggucgcuugauguuucuxxxxucuucccguucxxxxxx ] 7oqb_T_1_U_1 7oqe_LA_1_MA_1 [Xggacauauggcuguucgccauuxxxxx ] 7pli_A_1_B_1 7pli_C_1_D_1 7pli_G_1_H_1 7pli_I_1_J_1 7pli_K_1_L_1 [Xggacauauggcuguucgccauxxxxxx ] 7pli_E_1_F_1 [gggaaggguuucgacccuucccaauauggcuguucgccauuu ] 7pmq_A_1_H_1 7pmq_C_1_G_1 [xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgcugccgacgagaccgccgccaag ] 8c6j_E_1_S_1 [xxuugaccucaaaucagguaggacuacgcgcugaacxxxxxxxxxxxaauaagcgcaggaaaagaaaauaaccaugauucccucaguaacgxxxxgugaagcgggaaaagcucaaauuugaaaucuggcaacauuucuuuuguuguccgaguuguaauuucaagaagcugcuuugaguguagacgaucggucuaaguuccuuggaacaggacgucagagagggugagaaccccgucuuuggucgauuggauaugccauauaaagcgcuuucgaagagucgaguuguuxxxxxxugcagcucuaaauggguggxxxxxxucaucuaaagcuaaauauuggcgagagaccgauagcgaacaaguagagugaucgaaagaugaaaagaacuuugaaaagagaguuaaauaguacgugaaauugcugaaagggaagcauuggaaaucagucuuaccugggugagaucaguagucucuxxxcgagacuaugcacucugaaccugugguaggucagcaucaguuuucgggggcggaaaaagaauaagggaagguggcxxxxxxxxxxxxxxxxxxxxxxuguuuauagcccuuguuguaauacguccacuggggacugaggacugcggcuxxxugccaaggaugcugacauaaugguuuucaauggcccgucuugaaacacggaccaaggagucuagcaucuaugcgaguguuugggugaugaaaacccauccgcgaaxxxxxxxxxxxxxxxxgugggaacgcccuuguggcgugcaccaucxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxagagcauagcuguugggacccgaaagauggugxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxaaccaucuaguagcugguuccugccgaaguuuccxxxxggauagcagaaacucagaucaguuuuaugagxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxuauguaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxaaugagaguuucuagugggccauuuuugguaagcagaacuggcgaugcgggaugaaccgaacgugagguuaaggugccggaauguacgcucaucagacxxxxgaaaagguguuaguucauxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxaugaacuagcccugxxxxxxxxxggcgcuuaagcguacuacccauaccucaccgucuggguuagcuuugagaagcucagacgaguaggcaggcguggagguuugugacgaagccuugggcgugagccugggucgaacagccucuagugcagaucuugguggaaguagcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxuagaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxucuagcgaaaccacagccuggggaacgggccaggcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxucauaccgaagcagaauucgguaagcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxucgucgcaaugguaauucaacuuaguacgagaggaaccguugauucagaucauugguauuugcggxxxxxxxxxxxxxxxxxxccgcggagcuaucaucugccggauaacggcugaacgccucuaagccagaauccgugccagaaagcgacgauuxxxxxxxxxxxxxxxxxxxxauguauaaaaauagagguaggxxxxxxxxcuacucuccuguaucguagaagaugggcgaugguugaugaaacggaaguguuuuauugacuuguccaugaaauuccauxxxxxxxxxxxxxxxxxxxgaauccauugcauacgacuuuaauguggaacgggguauuguxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxagauuaagccuuuguucccaagauuug ] 8ev3_J_1_A_1 [xxuugaccucggaucagguaggaggacccgcugaacuuaagcauaucaauaagcggaggaaaagaaaccaacagggauugcccuaguaacggcgagugaagcggcaacagcucaaauuugaaagcuggcuucggcccgcguuguaauuuggagaggaugcuuugggcgaggcuccuucugaguucccuggaacgggacgccacagagggugagagccccguauaguuggaagccaagccuguguaaagcuccuucgacgagucgaguaguuugggaaugcugcucaaaaugggagguaaauuucuucuaaagcuaaauaccggccagagaccgauagcgcacaaguagagugaucgaaagaugaaaagcacuuugaaaagaggguuaaauagcacgugaaauuguugaaagggaagcgcuugugaccagacuugcgcccggcggaucauccgguguucucaccggugcacuccgccgggcucaggccagcaucgguucuggcggggggauaaaggcccagggaauguggcuccuccgggaguguuauagcccuggguguaauacccucgccgggaccgaggaccgcgcucugcaaggaugcuggcguaauggucaccagcgacccgucuugaaacacggaccaaggagucaagguuuugcgcgaguguuuggguguaaaacccgcacgcguaxxxxxxxxxxxxxxaggugagagcuucggcgcaucaucgaccgauccugauguauucggauggauuugaguaggagcguuaagccuuggacccgaaagauggugaacuaugcuuggauagggugaagccagaggaaacucugguggaggcucgcxxxxxxxxugacgugcaaxxxgaucgucaaaucugagcaugggggcgaaagacuxxxxxaaccaucuaguagcugguuaccgccgaaguuucccucaggauagcagugucgaccuucaguuuuaugagguaaagcgaaugxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxaacuuuaaauauguaagaagcccuuguuacuuaacugaacgugggcauucgaauguaucgacacuagugggccauuuuugguaagcagaacuggcgaugcgggaugaaccgaacgcgggguuaaggugccggaguggacgcucaucagacaccacaaaaggcguuaguacaucuugacagcaggacgguggccauggaagucggaauccgcuaaggacuguguaacaacucaccugccgaauguacuagcccugaaaauggauggcgcucaagcgucccacccauaccccgcccucaggguagaaacgaugcccugaggaguaggcggccguggaggucagugacgaagccuagggcgugagcccgggucgaacggccucuagugcagaucuuggugguaguagcaaauacuucaaugagaacuugaaggaccgaaguggggaaagguuccaugugaacagcgguuggacauggguuagucgauccuaagccauagggaaguuccguuucaaaggggcacucgugccccguguggcgaaagggaagccgguuaauauuccggcaccuggauguggguuuugcgcggcaacgcaacugaacgcggagacgacggcgggggccccgggcagaguucucuuuucuucuuaacggucuaucacccuggaaacaguuugucuggagauaggguuuaauggccggaagagcccgacacuucugucggguccggugcgcucucgacgucccuugaaaauccgcgggagggaauaauucucacgccaggucguacucauaaccgcagcagguccccaaggugaacagccucugguugauagaacaauguagauaagggaagucggcxxxxxxxxuccguaacuucgggaaaagxxxxggcucuaaggguugggcacguugggcuuugggcggacgcccugggagcagagggccucuagccgggcaaccggccggcggcccucagcacccgggguugaagcccuuagcxxxxxxxxxxxxxccggcgugcgguuaacaaccaacuuagaacugguacggacaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxcacugucccuaucuacuaucuagcgaaaccacagccaagggaacgggcuuggcaaaaucagcggggaaagaagacccuguugagcuugacucuaguuugacauugugaaaagacauaggagguguagaauaggugggagcuucggcgccagugaaauaccacuacuccuauuguuuuuuuacuuauucaaugxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxugaagacauugucagguggggaguuxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxccuuuagucccucgaaauuugaggcuagaggxxxxagaaaaguuaccacagggauaacuggcuuguggcggccaagcguucauagcgacgucgcuxxxxxxxxxxxxgaugucggcucuuccuaucauaccgaagcagaauucgguaagcguuggauuguucacccacuaauagggaxxgugagcugxxxxxxgaccgucgugagacagguuaguxxxxcccuacugaugaacucgucgcaaugguaauucagcuuaguacgagaggaaccgcugauucagauaauugguuuuugcgguuguccgaccgggcagugccgcgaagcuaccaucugcuggauaauggcugaacgccucuaagucagaauccaugccagaacgcgacgauacuacccgcacguuguagacguauaagaauaggcuccggccucguauccuagcaggcgauuccuccgccggccucgaaguggccgucgguaauucgcguauugcaauuuagacacgcgcgggaucaaauccuuugcagacgacuuagaugugcgaaaggguccuguaagcaguagaguagccuuguuguuacgaucugcugaggguaagcccuccuucgccuagauuucxxxx ] 8i9z_G_1_A_1
precipitant [SO4 ] 3fe2_B_1_G_1
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Summary for the 334-th Site(S)