HOMCOS(prot_sch_eachsite.cgi) for site

PID	QueryLength	FocusSite	TITLE
18363	4405	3298 V	RecName: Full=Replicase polyprotein 1a; Short=pp1a;AltName: Full=ORF1a polyprotein;Contains: RecName: Full=Host translation inhibitor nsp1; AltName: Full=Leader protein; AltName: Full=Non-structural protein 1; Short=nsp1;Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65 homolog;Contains: RecName: Full=Papain-like protease nsp3 ; EC=3.4.19.12 ; EC=3.4.22.-; AltName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=PL2-PRO; AltName: Full=Papain-like proteinase; Short=PL-PRO;Contains: RecName: Full=Non-structural protein 4; Short=nsp4;Contains: RecName: Full=3C-like proteinase nsp5; Short=3CL-PRO; Short=3CLp; EC=3.4.22.69; AltName: Full=Main protease; Short=Mpro ; AltName: Full=Non-structural protein 5; Short=nsp5; AltName: Full=SARS coronavirus main proteinase;Contains: RecName: Full=Non-structural protein 6; Short=nsp6;Contains: RecName: Full=Non-structural protein 7; Short=nsp7;Contains: RecName: Full=Non-structural protein 8; Short=nsp8;Contains: RecName: Full=RNA-capping enzyme subunit nsp9; AltName: Full=Non-structural protein 9; Short=nsp9; EC=2.7.7.50 ;Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL;Contains: RecName: Full=Non-structural protein 11; Short=nsp11;

UniProt Information

AC/ID	AC:P0DTC1 ID:R1A_SARS2
Feature Table for 3298-th site	STRAND: CHAIN: /note="3C-like proteinase nsp5" /id="PRO_0000449639" DOMAIN: /note="Peptidase C30" TOPO_DOM: /note="Cytoplasmic" CHAIN: /note="Replicase polyprotein 1a" /id="PRO_0000449634"

Evolutionary Information

Percentages of Amino Acids in Homologous Proteins

T:38% K:19% I:12% E:11% F:7% S:6% Y:5% V:3%

3D Structure Information

Template For Monomer	predicted SecStr	predicted ExpBur	Predicted Relative Acc(%)
6xbi	E (beta-strand)	b (buried)	20.0

3D Complex Information

Predicted Bind Molecules

precipitant:5

Templates for 3D complexes

precipitant [DMS ]