Summary for the 3535-th Site(D)
PID QueryLength FocusSite TITLE
19598 4382 3535 D RecName: Full=Replicase polyprotein 1a; Short=pp1a;AltName: Full=ORF1a polyprotein;Contains: RecName: Full=Host translation inhibitor nsp1; AltName: Full=Leader protein; AltName: Full=Non-structural protein 1; Short=nsp1;Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65 homolog;Contains: RecName: Full=Papain-like protease nsp3; Short=PL-PRO; EC=3.4.19.12 ; EC=3.4.22.- ; AltName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=PL2-PRO;Contains: RecName: Full=Non-structural protein 4; Short=nsp4;Contains: RecName: Full=3C-like proteinase nsp5; Short=3CL-PRO; Short=3CLp; EC=3.4.22.69 ; AltName: Full=Main protease; Short=Mpro; AltName: Full=Non-structural protein 5; Short=nsp5; AltName: Full=SARS coronavirus main proteinase;Contains: RecName: Full=Non-structural protein 6; Short=nsp6;Contains: RecName: Full=Non-structural protein 7; Short=nsp7;Contains: RecName: Full=Non-structural protein 8; Short=nsp8;Contains: RecName: Full=RNA-capping enzyme subunit nsp9; AltName: Full=Non-structural protein 9; Short=nsp9; EC=2.7.7.50;Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL;Contains: RecName: Full=Non-structural protein 11; Short=nsp11;
UniProt Information
AC/IDAC:P0C6U8 ID:R1A_SARS
Feature Table for 3535-th site HELIX:
CHAIN: /note="3C-like proteinase nsp5" /id="PRO_0000338259"
DOMAIN: /note="Peptidase C30"
TOPO_DOM: /note="Cytoplasmic"
CHAIN: /note="Replicase polyprotein 1a" /id="PRO_0000338254"
Evolutionary Information
Percentages of Amino Acids in Homologous Proteins [show alignment] 
D:52% E:35% S:13%
3D Structure Information
Template For Monomer predicted SecStr predicted ExpBur Predicted Relative Acc(%)
5b6o H (alpha-helix) b (buried) 12.3
3D Complex Information
Predicted Bind Molecules
homo:9 compound:3 metal:4 precipitant:376
Templates for 3D complexes
homo [69082:R1A_CVHSA ] 3iwm_A_1_C_1 3iwm_A_2_C_2 3iwm_B_1_D_1 3iwm_B_2_D_2 3iwm_C_1_A_1 3iwm_C_2_A_2 3iwm_D_1_B_1 3iwm_D_2_B_2 7gki_A_1_B_2 compound [U1V ] 5rgq_A_1_D_1 5rgq_A_2_D_2 [XZI ] 7grz_B_1_H_1 metal [CL ] 7avd_A_1_C_1 7avd_B_1_E_1 7b83_A_1_E_1 7b83_A_2_E_2 precipitant [DMS ] 2z9k_A_1_D_1 2z9l_A_1_D_1 5re4_A_1_C_1 5re4_A_2_C_2 5ren_A_1_C_1 5ren_A_2_C_2 5rfh_A_1_C_1 5rfh_A_2_C_2 5rfi_A_1_C_1 5rfi_A_2_C_2 5rfs_A_1_C_1 5rfs_A_2_C_2 5rgn_A_1_C_1 5rgn_A_2_C_2 5rgy_A_1_D_1 5rgy_A_2_D_2 5rh1_A_1_D_1 5rh1_A_2_D_2 5rh7_A_1_C_1 5rh7_A_2_C_2 5rhd_A_1_C_1 5rhd_A_2_C_2 6y84_A_1_D_1 6y84_A_2_D_2 7a1u_A_1_E_1 7a1u_A_2_E_2 7aeh_A_1_C_1 7aeh_A_2_C_2 7aga_A_1_E_1 7aga_A_2_E_2 7aws_A_1_D_1 7aws_A_2_D_2 7gav_A_1_F_1 7gav_B_1_K_1 7gaw_B_1_J_1 7gax_A_1_D_1 7gax_A_2_D_2 7gb1_A_1_C_1 7gb1_A_2_C_2 7gba_A_1_C_1 7gba_A_2_C_2 7gbf_A_1_C_1 7gbf_A_2_C_2 7gcc_A_1_C_1 7gcc_A_2_C_2 7gcd_A_1_C_1 7gcd_A_2_C_2 7gcp_A_1_C_1 7gcp_A_2_C_2 7gct_A_1_C_1 7gct_A_2_C_2 7gdj_A_1_C_1 7gdj_A_2_C_2 7gdl_A_1_C_1 7gdl_A_2_C_2 7gdn_A_1_C_1 7gdn_A_2_C_2 7gdr_A_1_C_1 7gdr_A_2_C_2 7gds_A_1_C_1 7gds_A_2_C_2 7gdt_A_1_C_1 7gdt_A_2_C_2 7gdu_A_1_C_1 7gdu_A_2_C_2 7gdy_A_1_C_1 7gdy_A_2_C_2 7ge8_A_1_C_1 7ge8_A_2_C_2 7geo_A_1_C_1 7geo_A_2_C_2 7ger_A_1_C_1 7ger_A_2_C_2 7geu_A_1_C_1 7geu_A_2_C_2 7gev_A_1_C_1 7gev_A_2_C_2 7gey_A_1_C_1 7gey_A_2_C_2 7gez_A_1_C_1 7gez_A_2_C_2 7gf0_A_1_C_1 7gf0_A_2_C_2 7gf2_A_1_C_1 7gf2_A_2_C_2 7gf7_A_1_C_1 7gf7_A_2_C_2 7gf9_A_1_C_1 7gf9_A_2_C_2 7gfc_A_1_C_1 7gfc_A_2_C_2 7gfd_A_1_C_1 7gfd_A_2_C_2 7gff_A_1_C_1 7gff_A_2_C_2 7gfi_A_1_C_1 7gfi_A_2_C_2 7gfk_A_1_C_1 7gfk_A_2_C_2 7gfl_A_1_C_1 7gfl_A_2_C_2 7gfm_A_1_C_1 7gfm_A_2_C_2 7gfn_A_1_C_1 7gfn_A_2_C_2 7gfv_A_1_C_1 7gfv_A_2_C_2 7gfy_A_1_C_1 7gfy_A_2_C_2 7gg1_A_1_C_1 7gg1_A_2_C_2 7gg3_A_1_C_1 7gg3_A_2_C_2 7gg9_A_1_C_1 7gg9_A_2_C_2 7gga_A_1_C_1 7gga_A_2_C_2 7ggb_A_1_C_1 7ggb_A_2_C_2 7ggc_A_1_C_1 7ggc_A_2_C_2 7ggd_A_1_C_1 7ggd_A_2_C_2 7gge_A_1_C_1 7gge_A_2_C_2 7ggh_A_1_C_1 7ggh_A_2_C_2 7ggm_A_1_C_1 7ggm_A_2_C_2 7ggp_A_1_C_1 7ggp_A_2_C_2 7ggu_A_1_C_1 7ggu_A_2_C_2 7ggw_A_1_C_1 7ggw_A_2_C_2 7ggx_A_1_C_1 7ggx_A_2_C_2 7ggz_A_1_C_1 7ggz_A_2_C_2 7gh0_A_1_C_1 7gh0_A_2_C_2 7gh1_A_1_C_1 7gh1_A_2_C_2 7gh2_A_1_C_1 7gh2_A_2_C_2 7ghc_A_1_D_1 7ghc_A_2_D_2 7ghd_A_1_D_1 7ghd_A_2_D_2 7ghm_B_1_L_1 7ghn_B_1_L_1 7gho_B_1_H_1 7ghp_B_1_K_1 7ghq_B_1_M_1 7ghr_B_1_K_1 7ghs_B_1_L_1 7ght_B_1_J_1 7ghu_B_1_I_1 7ghv_B_1_J_1 7ghw_B_1_P_1 7ghx_B_1_M_1 7ghy_B_1_M_1 7ghz_A_1_F_1 7ghz_B_1_O_1 7gi0_A_1_J_1 7gi0_B_1_O_1 7gi1_B_1_I_1 7gi2_B_1_M_1 7gi3_B_1_U_1 7gi4_B_1_H_1 7gi5_B_1_J_1 7gi6_B_1_F_1 7gi7_B_1_I_1 7gi8_B_1_P_1 7gi9_B_1_I_1 7gia_B_1_I_1 7gib_B_1_K_1 7gic_B_1_I_1 7gid_A_1_G_1 7gid_B_1_I_1 7gie_B_1_H_1 7gif_B_1_J_1 7gig_B_1_I_1 7gih_A_1_H_1 7gih_B_1_J_1 7gii_B_1_I_1 7gij_B_1_H_1 7gil_B_1_I_1 7gim_B_1_H_1 7gin_B_1_I_1 7gio_B_1_J_1 7gip_B_1_L_1 7giq_B_1_H_1 7gir_B_1_K_1 7gis_B_1_K_1 7git_B_1_J_1 7giu_B_1_H_1 7giv_B_1_H_1 7giw_B_1_G_1 7gix_B_1_I_1 7giy_B_1_I_1 7giz_B_1_K_1 7gj0_B_1_K_1 7gj1_B_1_L_1 7gj2_B_1_I_1 7gj3_B_1_K_1 7gj4_B_1_G_1 7gj5_B_1_I_1 7gj6_B_1_J_1 7gj7_B_1_L_1 7gj8_B_1_I_1 7gja_B_1_H_1 7gjb_B_1_J_1 7gje_B_1_J_1 7gjf_B_1_G_1 7gjh_B_1_J_1 7gji_B_1_J_1 7gjl_B_1_G_1 7gjr_B_1_G_1 7gjt_B_1_H_1 7gjy_A_1_D_1 7gk3_A_1_F_1 7gk6_A_1_F_1 7gk7_A_1_D_1 7gk8_A_1_D_1 7gk9_A_1_F_1 7gka_A_1_F_1 7gkb_A_1_F_1 7gkd_A_1_E_1 7gke_A_1_F_1 7gkf_A_1_F_1 7gkg_A_1_F_1 7gkh_A_1_F_1 7gki_A_1_E_1 7gkj_A_1_F_1 7gkk_A_1_F_1 7gkm_A_1_E_1 7gkn_A_1_E_1 7gkn_B_1_O_1 7gko_A_1_E_1 7gko_B_1_K_1 7gkp_A_1_E_1 7gkp_B_1_L_1 7gkq_A_1_F_1 7gkr_B_1_M_1 7gks_A_1_D_1 7gkt_A_1_F_1 7gku_A_1_E_1 7gkw_A_1_F_1 7gkx_A_1_E_1 7gky_A_1_F_1 7gl0_A_1_E_1 7gl1_A_1_E_1 7gl3_A_1_D_1 7gl6_A_1_F_1 7gl7_A_1_F_1 7gl8_A_1_E_1 7gl9_B_1_K_1 7gla_A_1_E_1 7glb_A_1_E_1 7glc_A_1_E_1 7glg_A_1_D_1 7gli_A_1_D_1 7glj_A_1_E_1 7glk_A_1_D_1 7gll_A_1_D_1 7gln_A_1_E_1 7glo_A_1_F_1 7glt_A_1_E_1 7glw_A_1_F_1 7glx_A_1_F_1 7glx_B_1_K_1 7gly_B_1_J_1 7gm0_A_1_E_1 7gm3_A_1_E_1 7gm4_A_1_E_1 7gm7_A_1_E_1 7gma_A_1_F_1 7gmd_A_1_F_1 7gmd_B_1_K_1 7gme_A_1_E_1 7gmf_A_1_F_1 7gmg_A_1_E_1 7gmh_A_1_F_1 7gmh_B_1_L_1 7gmi_A_1_E_1 7gmk_A_1_F_1 7gml_A_1_F_1 7gmm_A_1_F_1 7gmn_A_1_F_1 7gmo_A_1_F_1 7gmp_A_1_E_1 7gms_A_1_E_1 7gmw_A_1_F_1 7gn0_A_1_E_1 7gn1_A_1_E_1 7gn2_A_1_E_1 7gn2_B_1_K_1 7gn3_A_1_E_1 7gn3_B_1_L_1 7gn4_B_1_L_1 7gn5_B_1_J_1 7gn7_A_1_E_1 7gn7_B_1_K_1 7gn9_A_1_D_1 7gn9_B_1_M_1 7gna_A_1_D_1 7gna_B_1_I_1 7gnb_B_1_L_1 7gnc_A_1_F_1 7gnc_B_1_L_1 7gnd_B_1_K_1 7gne_A_1_E_1 7gne_B_1_J_1 7gnh_B_1_J_1 7gni_B_1_L_1 7gnj_B_1_M_1 7gnk_B_1_Q_1 7gnl_A_1_E_1 7gnl_B_1_K_1 7gnm_B_1_M_1 7gnn_A_1_E_1 7gnn_B_1_J_1 7gno_A_1_E_1 7gno_B_1_L_1 7gnp_B_1_Q_1 7gnq_B_1_Q_1 7gnr_B_1_P_1 7gns_B_1_L_1 7gnu_B_1_L_1 7gre_B_1_L_1 7grf_B_1_N_1 7grk_B_1_I_1 7grl_B_1_J_1 7gro_A_1_I_1 7gro_B_1_M_1 7grp_A_1_E_1 7grq_B_1_L_1 7grs_A_1_N_1 7grs_B_1_T_1 7gru_B_1_K_1 7grx_B_1_M_1 7gry_B_1_L_1 7grz_A_1_E_1 7gs0_B_1_J_1 7gs1_B_1_M_1 7gs2_B_1_K_1 7k3t_A_1_D_1 7k3t_A_2_D_2 7k40_A_1_E_1 7k40_A_2_E_2 7k6e_A_1_B_1 7k6e_A_2_B_2 7khp_B_1_E_1 7mbg_B_1_J_1 7mhf_A_1_D_1 7mhf_A_2_D_2 7mhn_A_1_B_1 7mhn_A_2_B_2 7mho_A_1_B_1 7mho_A_2_B_2 7nt1_B_1_E_1 7nt3_A_1_C_1 7phz_B_1_K_1 7z4s_A_1_F_1 7zb7_A_1_C_1 7zb7_A_2_C_2 8dz2_A_1_D_1 8dz2_B_1_F_1 8dz6_B_1_G_1 8dza_B_1_I_1 8e25_A_1_D_1 8okk_B_1_R_1 8r12_B_1_F_1 [EDO ] 7e18_A_1_G_1 7e18_A_2_G_2


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